Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:38:56 (281401): wrapper (7.7.26015): starting
09:38:56 (281401): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 09:38:56] Arguments: --nthreads 8
[2026-01-09 09:38:56] Threads: 8
[2026-01-09 09:38:56] Checking for CVMFS
[2026-01-09 09:38:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 09:38:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 09:38:57] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 09:38:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 09:38:58] 2.13.3.0 17216 93405 395188 154946 0 605 31486045 32935937 32890 16776704 0 1341222984 99.635 1305077041 49976 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 09:38:58] CVMFS is ok
[2026-01-09 09:38:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 09:38:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 09:38:58] Further information can be found at the LHC@home message board.
[2026-01-09 09:38:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 09:38:58] Checking for apptainer binary...
[2026-01-09 09:38:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 09:38:58] Running /usr/bin/apptainer --version
[2026-01-09 09:38:58] apptainer version 1.4.5-2.el9
[2026-01-09 09:38:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 09:38:58] c7-9-14.aglt2.org
[2026-01-09 09:38:58] apptainer works
[2026-01-09 09:38:59] Set ATHENA_PROC_NUMBER=8
[2026-01-09 09:38:59] Set ATHENA_CORE_NUMBER=8
[2026-01-09 09:38:59] Starting ATLAS job with PandaID=6963156057
[2026-01-09 09:38:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 12:32:52]  *** The last 200 lines of the pilot log: ***
[2026-01-09 12:32:52] 2026-01-09 17:32:11,499 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 12:32:52] 2026-01-09 17:32:11,539 | INFO     | time since job start (10312s) is within the limit (349056.0s)
[2026-01-09 12:32:52] 2026-01-09 17:32:13,573 | INFO     | time since job start (10314s) is within the limit (349056.0s)
[2026-01-09 12:32:52] 2026-01-09 17:32:14,004 | INFO     | monitor loop #672: job 0:6963156057 is in state 'finished'
[2026-01-09 12:32:52] 2026-01-09 17:32:14,004 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 12:32:52] 2026-01-09 17:32:16,535 | INFO     | monitor loop #673: job 0:6963156057 is in state 'finished'
[2026-01-09 12:32:52] 2026-01-09 17:32:16,535 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 12:32:52] 2026-01-09 17:32:16,756 | INFO     | PID=294772 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 12:32:52] 2026-01-09 17:32:16,756 | INFO     | .. there are 31 such processes running
[2026-01-09 12:32:52] 2026-01-09 17:32:17,344 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 12:32:52] 2026-01-09 17:32:17,359 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3796.9396093750006
[2026-01-09 12:32:52] 2026-01-09 17:32:17,430 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6963156057/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 12:32:52] 2026-01-09 17:32:17,430 | INFO     | extracted standard info from prmon json
[2026-01-09 12:32:52] 2026-01-09 17:32:17,431 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 12:32:52] 2026-01-09 17:32:17,431 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 12:32:52] 2026-01-09 17:32:17,431 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 12:32:52] 2026-01-09 17:32:17,431 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 12:32:52] 2026-01-09 17:32:17,433 | INFO     | fitting pss+swap vs Time
[2026-01-09 12:32:52] 2026-01-09 17:32:17,433 | INFO     | sum of square deviations: 1418385642.8975894
[2026-01-09 12:32:52] 2026-01-09 17:32:17,446 | INFO     | sum of deviations: 42895323286.48796
[2026-01-09 12:32:52] 2026-01-09 17:32:17,447 | INFO     | mean x: 1767974813.560241
[2026-01-09 12:32:52] 2026-01-09 17:32:17,447 | INFO     | mean y: 2434158.801204819
[2026-01-09 12:32:52] 2026-01-09 17:32:17,447 | INFO     | intersect: -53465289213.74175
[2026-01-09 12:32:52] 2026-01-09 17:32:17,447 | INFO     | chi2: 4.688105608771913
[2026-01-09 12:32:52] 2026-01-09 17:32:17,447 | INFO     | sum of square deviations: 1294042175.3788786
[2026-01-09 12:32:52] 2026-01-09 17:32:17,460 | INFO     | sum of deviations: 52621428922.788864
[2026-01-09 12:32:52] 2026-01-09 17:32:17,461 | INFO     | mean x: 1767974661.0621119
[2026-01-09 12:32:52] 2026-01-09 17:32:17,461 | INFO     | mean y: 2445747.6211180124
[2026-01-09 12:32:52] 2026-01-09 17:32:17,461 | INFO     | intersect: -71891156126.00613
[2026-01-09 12:32:52] 2026-01-09 17:32:17,461 | INFO     | chi2: 3.9149363906267496
[2026-01-09 12:32:52] 2026-01-09 17:32:17,461 | INFO     | current chi2=3.9149363906267496 (change=16.492145925605577 %)
[2026-01-09 12:32:52] 2026-01-09 17:32:17,461 | INFO     | right removable region: 160
[2026-01-09 12:32:52] 2026-01-09 17:32:17,461 | INFO     | sum of square deviations: 1294036075.3788786
[2026-01-09 12:32:52] 2026-01-09 17:32:17,462 | INFO     | sum of deviations: -7593435265.136645
[2026-01-09 12:32:52] 2026-01-09 17:32:17,462 | INFO     | mean x: 1767974966.0621119
[2026-01-09 12:32:52] 2026-01-09 17:32:17,462 | INFO     | mean y: 2495920.813664596
[2026-01-09 12:32:52] 2026-01-09 17:32:17,462 | INFO     | intersect: 10377016160.71047
[2026-01-09 12:32:52] 2026-01-09 17:32:17,462 | INFO     | chi2: 0.9942196975628781
[2026-01-09 12:32:52] 2026-01-09 17:32:17,462 | INFO     | current chi2=0.9942196975628781 (change=78.79271969252156 %)
[2026-01-09 12:32:52] 2026-01-09 17:32:17,462 | INFO     | sum of square deviations: 1177175020.3589737
[2026-01-09 12:32:52] 2026-01-09 17:32:17,462 | INFO     | sum of deviations: -15251392096.769234
[2026-01-09 12:32:52] 2026-01-09 17:32:17,463 | INFO     | mean x: 1767975118.5641026
[2026-01-09 12:32:52] 2026-01-09 17:32:17,463 | INFO     | mean y: 2505829.826923077
[2026-01-09 12:32:52] 2026-01-09 17:32:17,463 | INFO     | intersect: 22908260101.040257
[2026-01-09 12:32:52] 2026-01-09 17:32:17,463 | INFO     | chi2: 0.8851143752758346
[2026-01-09 12:32:52] 2026-01-09 17:32:17,463 | INFO     | current chi2=0.8851143752758346 (change=10.973965065718614 %)
[2026-01-09 12:32:52] 2026-01-09 17:32:17,463 | INFO     | left removable region: 20
[2026-01-09 12:32:52] 2026-01-09 17:32:17,463 | INFO     | sum of square deviations: 850840880.2857145
[2026-01-09 12:32:52] 2026-01-09 17:32:17,463 | INFO     | sum of deviations: 2128409757.8571427
[2026-01-09 12:32:52] 2026-01-09 17:32:17,463 | INFO     | mean x: 1767975240.5714285
[2026-01-09 12:32:52] 2026-01-09 17:32:17,463 | INFO     | mean y: 2510310.2642857144
[2026-01-09 12:32:52] 2026-01-09 17:32:17,464 | INFO     | intersect: -4420144784.09183
[2026-01-09 12:32:52] 2026-01-09 17:32:17,464 | INFO     | chi2: 0.0068694886177843185
[2026-01-09 12:32:52] 2026-01-09 17:32:17,464 | INFO     | current memory leak: 2.50 B/s (using 140 data points, chi2=0.01)
[2026-01-09 12:32:52] 2026-01-09 17:32:17,464 | INFO     | could have reported an average CPU frequency of 3795 MHz (9 samples)
[2026-01-09 12:32:52] 2026-01-09 17:32:17,477 | INFO     | ..............................
[2026-01-09 12:32:52] 2026-01-09 17:32:17,477 | INFO     | . Timing measurements:
[2026-01-09 12:32:52] 2026-01-09 17:32:17,477 | INFO     | . get job = 0 s
[2026-01-09 12:32:52] 2026-01-09 17:32:17,477 | INFO     | . initial setup = 8 s
[2026-01-09 12:32:52] 2026-01-09 17:32:17,477 | INFO     | . payload setup = 53 s
[2026-01-09 12:32:52] 2026-01-09 17:32:17,477 | INFO     | . stage-in = 0 s
[2026-01-09 12:32:52] 2026-01-09 17:32:17,478 | INFO     | . payload execution = 10150 s
[2026-01-09 12:32:52] 2026-01-09 17:32:17,478 | INFO     | . stage-out = 3 s
[2026-01-09 12:32:52] 2026-01-09 17:32:17,478 | INFO     | . log creation = 0 s
[2026-01-09 12:32:52] 2026-01-09 17:32:17,478 | INFO     | ..............................
[2026-01-09 12:32:52] 2026-01-09 17:32:17,622 | INFO     | 
[2026-01-09 12:32:52] 2026-01-09 17:32:17,625 | INFO     | job summary report
[2026-01-09 12:32:52] 2026-01-09 17:32:17,625 | INFO     | --------------------------------------------------
[2026-01-09 12:32:52] 2026-01-09 17:32:17,625 | INFO     | PanDA job id: 6963156057
[2026-01-09 12:32:52] 2026-01-09 17:32:17,625 | INFO     | task id: 47898826
[2026-01-09 12:32:52] 2026-01-09 17:32:17,625 | INFO     | errors: (none)
[2026-01-09 12:32:52] 2026-01-09 17:32:17,625 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 12:32:52] 2026-01-09 17:32:17,625 | INFO     | pilot state: finished 
[2026-01-09 12:32:52] 2026-01-09 17:32:17,625 | INFO     | transexitcode: 0
[2026-01-09 12:32:52] 2026-01-09 17:32:17,625 | INFO     | exeerrorcode: 0
[2026-01-09 12:32:52] 2026-01-09 17:32:17,625 | INFO     | exeerrordiag: 
[2026-01-09 12:32:52] 2026-01-09 17:32:17,625 | INFO     | exitcode: 0
[2026-01-09 12:32:52] 2026-01-09 17:32:17,625 | INFO     | exitmsg: OK
[2026-01-09 12:32:52] 2026-01-09 17:32:17,625 | INFO     | cpuconsumptiontime: 31701 s
[2026-01-09 12:32:52] 2026-01-09 17:32:17,625 | INFO     | nevents: 400
[2026-01-09 12:32:52] 2026-01-09 17:32:17,625 | INFO     | neventsw: 0
[2026-01-09 12:32:52] 2026-01-09 17:32:17,626 | INFO     | pid: 316916
[2026-01-09 12:32:52] 2026-01-09 17:32:17,626 | INFO     | pgrp: 316916
[2026-01-09 12:32:52] 2026-01-09 17:32:17,626 | INFO     | corecount: 8
[2026-01-09 12:32:52] 2026-01-09 17:32:17,626 | INFO     | event service: False
[2026-01-09 12:32:52] 2026-01-09 17:32:17,626 | INFO     | sizes: {0: 2283798, 1: 2283997, 12: 2283997, 23: 2284025, 32: 2284315, 34: 2284343, 10207: 2313167, 10208: 2313166, 10212: 2322220, 10214: 2322304, 10252: 2322562}
[2026-01-09 12:32:52] 2026-01-09 17:32:17,626 | INFO     | --------------------------------------------------
[2026-01-09 12:32:52] 2026-01-09 17:32:17,626 | INFO     | 
[2026-01-09 12:32:52] 2026-01-09 17:32:17,626 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-01-09 12:32:52] 2026-01-09 17:32:17,738 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 12:32:52] 2026-01-09 17:32:17,739 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 12:32:52] 2026-01-09 17:32:17,739 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 12:32:52] 2026-01-09 17:32:17,739 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 12:32:52] 2026-01-09 17:32:17,739 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 12:32:52] 2026-01-09 17:32:17,739 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 12:32:52] 2026-01-09 17:32:17,739 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 12:32:52] 2026-01-09 17:32:17,739 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 12:32:52] 2026-01-09 17:32:17,739 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 12:32:52] 2026-01-09 17:32:17,739 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 12:32:52] 2026-01-09 17:32:17,739 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 12:32:52] 2026-01-09 17:32:17,739 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 12:32:52] 2026-01-09 17:32:17,739 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 12:32:52] 2026-01-09 17:32:17,739 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 12:32:52] 2026-01-09 17:32:17,739 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 12:32:52] 2026-01-09 17:32:17,739 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 12:32:52] 2026-01-09 17:32:17,739 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 12:32:52] 2026-01-09 17:32:17,739 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 12:32:52] 2026-01-09 17:32:17,739 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 12:32:52] 2026-01-09 17:32:17,739 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 12:32:52] 2026-01-09 17:32:17,739 | INFO     | job 6963156057 has completed (purged errors)
[2026-01-09 12:32:52] 2026-01-09 17:32:17,740 | INFO     | overall cleanup function is called
[2026-01-09 12:32:52] 2026-01-09 17:32:18,778 | INFO     | --- collectZombieJob: --- 10, [316916]
[2026-01-09 12:32:52] 2026-01-09 17:32:18,778 | INFO     | zombie collector waiting for pid 316916
[2026-01-09 12:32:52] 2026-01-09 17:32:18,778 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 12:32:52] 2026-01-09 17:32:18,779 | INFO     | collected zombie processes
[2026-01-09 12:32:52] 2026-01-09 17:32:18,779 | INFO     | will attempt to kill all subprocesses of pid=316916
[2026-01-09 12:32:52] 2026-01-09 17:32:19,636 | INFO     | process IDs to be killed: [316916] (in reverse order)
[2026-01-09 12:32:52] 2026-01-09 17:32:19,824 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 12:32:52] 2026-01-09 17:32:19,825 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 12:32:52] 2026-01-09 17:32:19,854 | INFO     | did not find any defunct processes belonging to 316916
[2026-01-09 12:32:52] 2026-01-09 17:32:19,875 | INFO     | did not find any defunct processes belonging to 316916
[2026-01-09 12:32:52] 2026-01-09 17:32:19,875 | INFO     | ready for new job
[2026-01-09 12:32:52] 2026-01-09 17:32:19,875 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 12:32:52] 2026-01-09 17:32:19,876 | INFO     | ***************************************
[2026-01-09 12:32:52] 2026-01-09 17:32:19,877 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 12:32:52] 2026-01-09 17:32:19,877 | INFO     | ***************************************
[2026-01-09 12:32:52] 2026-01-09 17:32:19,877 | INFO     | 
[2026-01-09 12:32:52] 2026-01-09 17:32:19,881 | INFO     | architecture information:
[2026-01-09 12:32:52] 2026-01-09 17:32:19,885 | INFO     | executing command: cat /etc/os-release
[2026-01-09 12:32:52] 2026-01-09 17:32:19,955 | INFO     | cat /etc/os-release:
[2026-01-09 12:32:52] NAME="CentOS Linux"
[2026-01-09 12:32:52] VERSION="7 (Core)"
[2026-01-09 12:32:52] ID="centos"
[2026-01-09 12:32:52] ID_LIKE="rhel fedora"
[2026-01-09 12:32:52] VERSION_ID="7"
[2026-01-09 12:32:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 12:32:52] ANSI_COLOR="0;31"
[2026-01-09 12:32:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 12:32:52] HOME_URL="https://www.centos.org/"
[2026-01-09 12:32:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 12:32:52] 
[2026-01-09 12:32:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 12:32:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 12:32:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 12:32:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 12:32:52] 
[2026-01-09 12:32:52] 2026-01-09 17:32:19,955 | INFO     | ***************************************
[2026-01-09 12:32:52] 2026-01-09 17:32:20,460 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-01-09 12:32:52] 2026-01-09 17:32:20,565 | INFO     | sufficient remaining disk space (73312239616 B)
[2026-01-09 12:32:52] 2026-01-09 17:32:20,565 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 12:32:52] 2026-01-09 17:32:20,565 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 12:32:52] 2026-01-09 17:32:20,565 | INFO     | update_server=False
[2026-01-09 12:32:52] 2026-01-09 17:32:20,565 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 12:32:52] 2026-01-09 17:32:20,577 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:32:52] 2026-01-09 17:32:20,577 | INFO     | aborting loop
[2026-01-09 12:32:52] 2026-01-09 17:32:20,777 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 12:32:52] 2026-01-09 17:32:21,171 | INFO     | all job control threads have been joined
[2026-01-09 12:32:52] 2026-01-09 17:32:21,374 | INFO     | all payload control threads have been joined
[2026-01-09 12:32:52] 2026-01-09 17:32:21,571 | INFO     | [job] retrieve thread has finished
[2026-01-09 12:32:52] 2026-01-09 17:32:21,583 | INFO     | [job] job monitor thread has finished
[2026-01-09 12:32:52] 2026-01-09 17:32:21,609 | INFO     | all data control threads have been joined
[2026-01-09 12:32:52] 2026-01-09 17:32:21,716 | INFO     | [payload] validate_post thread has finished
[2026-01-09 12:32:52] 2026-01-09 17:32:22,177 | INFO     | [job] control thread has finished
[2026-01-09 12:32:52] 2026-01-09 17:32:22,201 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 12:32:52] 2026-01-09 17:32:22,204 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 12:32:52] 2026-01-09 17:32:22,364 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 12:32:52] 2026-01-09 17:32:22,380 | INFO     | [payload] control thread has finished
[2026-01-09 12:32:52] 2026-01-09 17:32:22,526 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 12:32:52] 2026-01-09 17:32:22,574 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:32:52] 2026-01-09 17:32:22,584 | INFO     | [payload] failed_post thread has finished
[2026-01-09 12:32:52] 2026-01-09 17:32:22,615 | INFO     | [data] control thread has finished
[2026-01-09 12:32:52] 2026-01-09 17:32:22,658 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 12:32:52] 2026-01-09 17:32:22,676 | INFO     | [job] validate thread has finished
[2026-01-09 12:32:52] 2026-01-09 17:32:22,689 | INFO     | [data] copytool_in thread has finished
[2026-01-09 12:32:52] 2026-01-09 17:32:22,784 | INFO     | [data] copytool_out thread has finished
[2026-01-09 12:32:52] 2026-01-09 17:32:23,579 | INFO     | [job] queue monitor thread has finished
[2026-01-09 12:32:52] 2026-01-09 17:32:26,394 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 12:32:52] 2026-01-09 17:32:36,775 | INFO     | [monitor] cgroup control has ended
[2026-01-09 12:32:52] 2026-01-09 17:32:37,208 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140321453483840)>', '<ExcThread(monitor, started 140321102997248)>']
[2026-01-09 12:32:52] 2026-01-09 17:32:42,234 | INFO     | all workflow threads have been joined
[2026-01-09 12:32:52] 2026-01-09 17:32:42,234 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 12:32:52] 2026-01-09 17:32:42,235 | INFO     | traces error code: 0
[2026-01-09 12:32:52] 2026-01-09 17:32:42,235 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 12:32:52] 2026-01-09 17:32:50,166 | INFO     | PID=294772 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 12:32:52] 2026-01-09 17:32:50,166 | INFO     | .. there are 31 such processes running
[2026-01-09 12:32:52] 2026-01-09 17:32:50,172 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 12:32:52] 2026-01-09 17:32:50,172 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 12:32:52] 2026-01-09 17:32:50,172 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 12:32:52] 2026-01-09 17:32:50,172 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 12:32:52] 2026-01-09 17:32:50,172 | INFO     | [monitor] control thread has ended
[2026-01-09 12:32:52] 2026-01-09 17:32:50,595 [wrapper] ==== pilot stdout END ====
[2026-01-09 12:32:52] 2026-01-09 17:32:50,636 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 12:32:52] 2026-01-09 17:32:50,664 [wrapper] pilotpid: 294772
[2026-01-09 12:32:52] 2026-01-09 17:32:50,718 [wrapper] Pilot exit status: 0
[2026-01-09 12:32:52] 2026-01-09 17:32:50,865 [wrapper] pandaids: 6963156057
[2026-01-09 12:32:52] 2026-01-09 17:32:51,110 [wrapper] cleanup supervisor_pilot 1882958 294773
[2026-01-09 12:32:52] 2026-01-09 17:32:51,137 [wrapper] Test setup, not cleaning
[2026-01-09 12:32:52] 2026-01-09 17:32:51,152 [wrapper] apfmon messages muted
[2026-01-09 12:32:52] 2026-01-09 17:32:51,159 [wrapper] ==== wrapper stdout END ====
[2026-01-09 12:32:52] 2026-01-09 17:32:51,231 [wrapper] ==== wrapper stderr END ====
[2026-01-09 12:32:52]  *** Error codes and diagnostics ***
[2026-01-09 12:32:52]     "exeErrorCode": 0,
[2026-01-09 12:32:52]     "exeErrorDiag": "",
[2026-01-09 12:32:52]     "pilotErrorCode": 0,
[2026-01-09 12:32:52]     "pilotErrorDiag": "",
[2026-01-09 12:32:52]  *** Listing of results directory ***
[2026-01-09 12:32:52] total 438152
[2026-01-09 12:32:52] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 14:06 pilot3.tar.gz
[2026-01-09 12:32:52] -rwx------. 1 boincer umatlas     36322 Jan  8 14:07 runpilot2-wrapper.sh
[2026-01-09 12:32:52] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 14:07 queuedata.json
[2026-01-09 12:32:52] -rw-r--r--. 1 boincer umatlas       100 Jan  9 09:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 12:32:52] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 09:38 run_atlas
[2026-01-09 12:32:52] -rw-r--r--. 1 boincer umatlas       105 Jan  9 09:38 job.xml
[2026-01-09 12:32:52] -rw-r--r--. 2 boincer umatlas 223263897 Jan  9 09:38 EVNT.47898824._000891.pool.root.1
[2026-01-09 12:32:52] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 09:38 start_atlas.sh
[2026-01-09 12:32:52] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 09:38 shared
[2026-01-09 12:32:52] -rw-r--r--. 2 boincer umatlas    592396 Jan  9 09:38 input.tar.gz
[2026-01-09 12:32:52] -rw-r--r--. 1 boincer umatlas         0 Jan  9 09:38 boinc_lockfile
[2026-01-09 12:32:52] -rw-r--r--. 1 boincer umatlas      2519 Jan  9 09:38 pandaJob.out
[2026-01-09 12:32:52] -rw-------. 1 boincer umatlas        57 Jan  9 09:39 setup.sh.local
[2026-01-09 12:32:52] -rw-------. 1 boincer umatlas    989377 Jan  9 09:40 agis_schedconf.cvmfs.json
[2026-01-09 12:32:52] -rw-------. 1 boincer umatlas   1516240 Jan  9 09:40 agis_ddmendpoints.agis.ALL.json
[2026-01-09 12:32:52] drwx------. 5 boincer umatlas      4096 Jan  9 09:40 pilot3
[2026-01-09 12:32:52] -rw-------. 1 boincer umatlas 218016991 Jan  9 12:30 HITS.47898826._031278.pool.root.1
[2026-01-09 12:32:52] -rw-r--r--. 1 boincer umatlas       529 Jan  9 12:30 boinc_task_state.xml
[2026-01-09 12:32:52] -rw-r--r--. 1 boincer umatlas      7171 Jan  9 12:31 init_data.xml
[2026-01-09 12:32:52] -rw-------. 1 boincer umatlas      1035 Jan  9 12:31 memory_monitor_summary.json
[2026-01-09 12:32:52] -rw-------. 1 boincer umatlas    393102 Jan  9 12:31 log.47898826._031278.job.log.tgz.1
[2026-01-09 12:32:52] -rw-------. 1 boincer umatlas      7780 Jan  9 12:32 heartbeat.json
[2026-01-09 12:32:52] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 12:32 boinc_mmap_file
[2026-01-09 12:32:52] -rw-r--r--. 1 boincer umatlas        27 Jan  9 12:32 wrapper_checkpoint.txt
[2026-01-09 12:32:52] -rw-------. 1 boincer umatlas        95 Jan  9 12:32 pilot_heartbeat.json
[2026-01-09 12:32:52] -rw-------. 1 boincer umatlas       822 Jan  9 12:32 pilotlog.txt
[2026-01-09 12:32:52] -rw-------. 1 boincer umatlas   1344568 Jan  9 12:32 log.47898826._031278.job.log.1
[2026-01-09 12:32:52] -rw-------. 1 boincer umatlas       357 Jan  9 12:32 output.list
[2026-01-09 12:32:52] -rw-r--r--. 1 boincer umatlas       620 Jan  9 12:32 runtime_log
[2026-01-09 12:32:52] -rw-------. 1 boincer umatlas   1761280 Jan  9 12:32 result.tar.gz
[2026-01-09 12:32:52] -rw-------. 1 boincer umatlas       653 Jan  9 12:32 SuKMDmhWAy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmbElKDm83HBgm.diag
[2026-01-09 12:32:52] -rw-r--r--. 1 boincer umatlas      9338 Jan  9 12:32 runtime_log.err
[2026-01-09 12:32:52] -rw-r--r--. 1 boincer umatlas     21286 Jan  9 12:32 stderr.txt
[2026-01-09 12:32:52] HITS file was successfully produced:
[2026-01-09 12:32:52] -rw-------. 1 boincer umatlas 218016991 Jan  9 12:30 shared/HITS.pool.root.1
[2026-01-09 12:32:52]  *** Contents of shared directory: ***
[2026-01-09 12:32:52] total 433260
[2026-01-09 12:32:52] -rw-r--r--. 2 boincer umatlas 223263897 Jan  9 09:38 ATLAS.root_0
[2026-01-09 12:32:52] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 09:38 start_atlas.sh
[2026-01-09 12:32:52] -rw-r--r--. 2 boincer umatlas    592396 Jan  9 09:38 input.tar.gz
[2026-01-09 12:32:52] -rw-------. 1 boincer umatlas 218016991 Jan  9 12:30 HITS.pool.root.1
[2026-01-09 12:32:52] -rw-------. 1 boincer umatlas   1761280 Jan  9 12:32 result.tar.gz
12:32:53 (281401): run_atlas exited; CPU time 31905.526969
12:32:53 (281401): called boinc_finish(0)

</stderr_txt>
]]>

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