Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:26:19 (27309): wrapper (7.7.26015): starting
09:26:19 (27309): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 09:26:19] Arguments: --nthreads 8
[2026-01-09 09:26:19] Threads: 8
[2026-01-09 09:26:19] Checking for CVMFS
[2026-01-09 09:26:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 09:26:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 09:26:19] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 09:26:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 09:26:19] 2.11.2.0 14221 181145 134492 154946 1 56 10238517 18432000 125 130560 0 122059619 99.980 6961971 32160 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 09:26:19] CVMFS is ok
[2026-01-09 09:26:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 09:26:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 09:26:19] Further information can be found at the LHC@home message board.
[2026-01-09 09:26:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 09:26:19] Checking for apptainer binary...
[2026-01-09 09:26:19] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 09:26:19] Running /usr/bin/apptainer --version
[2026-01-09 09:26:19] apptainer version 1.3.2-1.el7
[2026-01-09 09:26:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 09:26:20] c-206-9.aglt2.org
[2026-01-09 09:26:20] apptainer works
[2026-01-09 09:26:20] Set ATHENA_PROC_NUMBER=8
[2026-01-09 09:26:20] Set ATHENA_CORE_NUMBER=8
[2026-01-09 09:26:20] Starting ATLAS job with PandaID=6963167245
[2026-01-09 09:26:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 13:55:16]  *** The last 200 lines of the pilot log: ***
[2026-01-09 13:55:16] 2026-01-09 18:54:43,334 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 13:55:16] 2026-01-09 18:54:43,339 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 1706.875
[2026-01-09 13:55:16] 2026-01-09 18:54:43,343 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6963167245/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 13:55:16] 2026-01-09 18:54:43,343 | INFO     | extracted standard info from prmon json
[2026-01-09 13:55:16] 2026-01-09 18:54:43,343 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 13:55:16] 2026-01-09 18:54:43,344 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 13:55:16] 2026-01-09 18:54:43,344 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 13:55:16] 2026-01-09 18:54:43,344 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 13:55:16] 2026-01-09 18:54:43,349 | INFO     | fitting pss+swap vs Time
[2026-01-09 13:55:16] 2026-01-09 18:54:43,349 | INFO     | sum of square deviations: 5705372090.0
[2026-01-09 13:55:16] 2026-01-09 18:54:43,351 | INFO     | sum of deviations: 26585716101.500004
[2026-01-09 13:55:16] 2026-01-09 18:54:43,351 | INFO     | mean x: 1767976841.5
[2026-01-09 13:55:16] 2026-01-09 18:54:43,351 | INFO     | mean y: 2475420.4886363638
[2026-01-09 13:55:16] 2026-01-09 18:54:43,352 | INFO     | intersect: -8235888290.184908
[2026-01-09 13:55:16] 2026-01-09 18:54:43,352 | INFO     | chi2: 2.114951067845196
[2026-01-09 13:55:16] 2026-01-09 18:54:43,352 | INFO     | sum of square deviations: 5387301010.0
[2026-01-09 13:55:16] 2026-01-09 18:54:43,354 | INFO     | sum of deviations: 43194807112.00001
[2026-01-09 13:55:16] 2026-01-09 18:54:43,354 | INFO     | mean x: 1767976689.0
[2026-01-09 13:55:16] 2026-01-09 18:54:43,354 | INFO     | mean y: 2483255.250965251
[2026-01-09 13:55:16] 2026-01-09 18:54:43,354 | INFO     | intersect: -14172965994.403534
[2026-01-09 13:55:16] 2026-01-09 18:54:43,355 | INFO     | chi2: 1.3432789465398671
[2026-01-09 13:55:16] 2026-01-09 18:54:43,355 | INFO     | current chi2=1.3432789465398671 (change=36.48652363818242 %)
[2026-01-09 13:55:16] 2026-01-09 18:54:43,355 | INFO     | sum of square deviations: 5081276667.5
[2026-01-09 13:55:16] 2026-01-09 18:54:43,357 | INFO     | sum of deviations: 42100468454.000015
[2026-01-09 13:55:16] 2026-01-09 18:54:43,357 | INFO     | mean x: 1767976536.5
[2026-01-09 13:55:16] 2026-01-09 18:54:43,357 | INFO     | mean y: 2482709.7086614175
[2026-01-09 13:55:16] 2026-01-09 18:54:43,357 | INFO     | intersect: -14645930528.32734
[2026-01-09 13:55:16] 2026-01-09 18:54:43,358 | INFO     | chi2: 1.3436511432358365
[2026-01-09 13:55:16] 2026-01-09 18:54:43,358 | INFO     | current chi2=1.3436511432358365 (change=-0.027708071873534915 %)
[2026-01-09 13:55:16] 2026-01-09 18:54:43,358 | INFO     | right removable region: 253
[2026-01-09 13:55:16] 2026-01-09 18:54:43,358 | INFO     | sum of square deviations: 5387301010.0
[2026-01-09 13:55:16] 2026-01-09 18:54:43,360 | INFO     | sum of deviations: -11026456441.0
[2026-01-09 13:55:16] 2026-01-09 18:54:43,360 | INFO     | mean x: 1767976994.0
[2026-01-09 13:55:16] 2026-01-09 18:54:43,360 | INFO     | mean y: 2493306.806949807
[2026-01-09 13:55:16] 2026-01-09 18:54:43,360 | INFO     | intersect: 3621099595.3445783
[2026-01-09 13:55:16] 2026-01-09 18:54:43,361 | INFO     | chi2: 0.8545132789731218
[2026-01-09 13:55:16] 2026-01-09 18:54:43,361 | INFO     | current chi2=0.8545132789731218 (change=59.5965461345762 %)
[2026-01-09 13:55:16] 2026-01-09 18:54:43,361 | INFO     | sum of square deviations: 5081276667.5
[2026-01-09 13:55:16] 2026-01-09 18:54:43,363 | INFO     | sum of deviations: -20018887737.5
[2026-01-09 13:55:16] 2026-01-09 18:54:43,363 | INFO     | mean x: 1767977146.5
[2026-01-09 13:55:16] 2026-01-09 18:54:43,363 | INFO     | mean y: 2497772.0826771655
[2026-01-09 13:55:16] 2026-01-09 18:54:43,363 | INFO     | intersect: 6967860678.736311
[2026-01-09 13:55:16] 2026-01-09 18:54:43,363 | INFO     | chi2: 0.8009572037570527
[2026-01-09 13:55:16] 2026-01-09 18:54:43,363 | INFO     | current chi2=0.8009572037570527 (change=6.26743627441671 %)
[2026-01-09 13:55:16] 2026-01-09 18:54:43,364 | INFO     | left removable region: 20
[2026-01-09 13:55:16] 2026-01-09 18:54:43,364 | INFO     | sum of square deviations: 3922276332.0
[2026-01-09 13:55:16] 2026-01-09 18:54:43,365 | INFO     | sum of deviations: -1992317400.9999995
[2026-01-09 13:55:16] 2026-01-09 18:54:43,365 | INFO     | mean x: 1767977116.0
[2026-01-09 13:55:16] 2026-01-09 18:54:43,365 | INFO     | mean y: 2505443.948497854
[2026-01-09 13:55:16] 2026-01-09 18:54:43,366 | INFO     | intersect: 900548130.0385188
[2026-01-09 13:55:16] 2026-01-09 18:54:43,366 | INFO     | chi2: 0.014903533830908264
[2026-01-09 13:55:16] 2026-01-09 18:54:43,366 | INFO     | current memory leak: -0.51 B/s (using 233 data points, chi2=0.01)
[2026-01-09 13:55:16] 2026-01-09 18:54:43,367 | INFO     | could have reported an average CPU frequency of 2340 MHz (12 samples)
[2026-01-09 13:55:16] 2026-01-09 18:54:43,367 | INFO     | ..............................
[2026-01-09 13:55:16] 2026-01-09 18:54:43,367 | INFO     | . Timing measurements:
[2026-01-09 13:55:16] 2026-01-09 18:54:43,367 | INFO     | . get job = 0 s
[2026-01-09 13:55:16] 2026-01-09 18:54:43,367 | INFO     | . initial setup = 2 s
[2026-01-09 13:55:16] 2026-01-09 18:54:43,367 | INFO     | . payload setup = 6 s
[2026-01-09 13:55:16] 2026-01-09 18:54:43,367 | INFO     | . stage-in = 0 s
[2026-01-09 13:55:16] 2026-01-09 18:54:43,367 | INFO     | . payload execution = 16057 s
[2026-01-09 13:55:16] 2026-01-09 18:54:43,368 | INFO     | . stage-out = 1 s
[2026-01-09 13:55:16] 2026-01-09 18:54:43,368 | INFO     | . log creation = 0 s
[2026-01-09 13:55:16] 2026-01-09 18:54:43,368 | INFO     | ..............................
[2026-01-09 13:55:16] 2026-01-09 18:54:43,449 | INFO     | 
[2026-01-09 13:55:16] 2026-01-09 18:54:43,450 | INFO     | job summary report
[2026-01-09 13:55:16] 2026-01-09 18:54:43,450 | INFO     | --------------------------------------------------
[2026-01-09 13:55:16] 2026-01-09 18:54:43,450 | INFO     | PanDA job id: 6963167245
[2026-01-09 13:55:16] 2026-01-09 18:54:43,450 | INFO     | task id: 47898826
[2026-01-09 13:55:16] 2026-01-09 18:54:43,450 | INFO     | errors: (none)
[2026-01-09 13:55:16] 2026-01-09 18:54:43,451 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 13:55:16] 2026-01-09 18:54:43,451 | INFO     | pilot state: finished 
[2026-01-09 13:55:16] 2026-01-09 18:54:43,451 | INFO     | transexitcode: 0
[2026-01-09 13:55:16] 2026-01-09 18:54:43,451 | INFO     | exeerrorcode: 0
[2026-01-09 13:55:16] 2026-01-09 18:54:43,451 | INFO     | exeerrordiag: 
[2026-01-09 13:55:16] 2026-01-09 18:54:43,451 | INFO     | exitcode: 0
[2026-01-09 13:55:16] 2026-01-09 18:54:43,452 | INFO     | exitmsg: OK
[2026-01-09 13:55:16] 2026-01-09 18:54:43,452 | INFO     | cpuconsumptiontime: 122408 s
[2026-01-09 13:55:16] 2026-01-09 18:54:43,452 | INFO     | nevents: 400
[2026-01-09 13:55:16] 2026-01-09 18:54:43,452 | INFO     | neventsw: 0
[2026-01-09 13:55:16] 2026-01-09 18:54:43,452 | INFO     | pid: 16779
[2026-01-09 13:55:16] 2026-01-09 18:54:43,452 | INFO     | pgrp: 16779
[2026-01-09 13:55:16] 2026-01-09 18:54:43,452 | INFO     | corecount: 8
[2026-01-09 13:55:16] 2026-01-09 18:54:43,453 | INFO     | event service: False
[2026-01-09 13:55:16] 2026-01-09 18:54:43,453 | INFO     | sizes: {0: 2283743, 1: 2283998, 6: 2284260, 12: 2284288, 16068: 2315668, 16070: 2324850, 16075: 2324988}
[2026-01-09 13:55:16] 2026-01-09 18:54:43,453 | INFO     | --------------------------------------------------
[2026-01-09 13:55:16] 2026-01-09 18:54:43,453 | INFO     | 
[2026-01-09 13:55:16] 2026-01-09 18:54:43,453 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-09 13:55:16] 2026-01-09 18:54:43,473 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 13:55:16] 2026-01-09 18:54:43,473 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 13:55:16] 2026-01-09 18:54:43,474 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 13:55:16] 2026-01-09 18:54:43,474 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 13:55:16] 2026-01-09 18:54:43,474 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 13:55:16] 2026-01-09 18:54:43,474 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 13:55:16] 2026-01-09 18:54:43,475 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 13:55:16] 2026-01-09 18:54:43,475 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 13:55:16] 2026-01-09 18:54:43,475 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 13:55:16] 2026-01-09 18:54:43,475 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 13:55:16] 2026-01-09 18:54:43,475 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 13:55:16] 2026-01-09 18:54:43,475 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 13:55:16] 2026-01-09 18:54:43,476 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 13:55:16] 2026-01-09 18:54:43,476 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 13:55:16] 2026-01-09 18:54:43,476 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 13:55:16] 2026-01-09 18:54:43,476 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 13:55:16] 2026-01-09 18:54:43,477 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 13:55:16] 2026-01-09 18:54:43,477 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 13:55:16] 2026-01-09 18:54:43,477 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 13:55:16] 2026-01-09 18:54:43,477 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 13:55:16] 2026-01-09 18:54:43,477 | INFO     | job 6963167245 has completed (purged errors)
[2026-01-09 13:55:16] 2026-01-09 18:54:43,478 | INFO     | overall cleanup function is called
[2026-01-09 13:55:16] 2026-01-09 18:54:43,608 | INFO     | PID=1754 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 13:55:16] 2026-01-09 18:54:43,608 | INFO     | .. there are 2 such processes running
[2026-01-09 13:55:16] 2026-01-09 18:54:44,488 | INFO     | --- collectZombieJob: --- 10, [16779]
[2026-01-09 13:55:16] 2026-01-09 18:54:44,488 | INFO     | zombie collector waiting for pid 16779
[2026-01-09 13:55:16] 2026-01-09 18:54:44,488 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 13:55:16] 2026-01-09 18:54:44,488 | INFO     | collected zombie processes
[2026-01-09 13:55:16] 2026-01-09 18:54:44,488 | INFO     | will attempt to kill all subprocesses of pid=16779
[2026-01-09 13:55:16] 2026-01-09 18:54:44,590 | INFO     | process IDs to be killed: [16779] (in reverse order)
[2026-01-09 13:55:16] 2026-01-09 18:54:44,640 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 13:55:16] 2026-01-09 18:54:44,640 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 13:55:16] 2026-01-09 18:54:44,644 | INFO     | did not find any defunct processes belonging to 16779
[2026-01-09 13:55:16] 2026-01-09 18:54:44,648 | INFO     | did not find any defunct processes belonging to 16779
[2026-01-09 13:55:16] 2026-01-09 18:54:44,648 | INFO     | ready for new job
[2026-01-09 13:55:16] 2026-01-09 18:54:44,648 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 13:55:16] 2026-01-09 18:54:44,650 | INFO     | ***************************************
[2026-01-09 13:55:16] 2026-01-09 18:54:44,650 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 13:55:16] 2026-01-09 18:54:44,650 | INFO     | ***************************************
[2026-01-09 13:55:16] 2026-01-09 18:54:44,650 | INFO     | 
[2026-01-09 13:55:16] 2026-01-09 18:54:44,651 | INFO     | architecture information:
[2026-01-09 13:55:16] 2026-01-09 18:54:44,652 | INFO     | executing command: cat /etc/os-release
[2026-01-09 13:55:16] 2026-01-09 18:54:44,665 | INFO     | cat /etc/os-release:
[2026-01-09 13:55:16] NAME="CentOS Linux"
[2026-01-09 13:55:16] VERSION="7 (Core)"
[2026-01-09 13:55:16] ID="centos"
[2026-01-09 13:55:16] ID_LIKE="rhel fedora"
[2026-01-09 13:55:16] VERSION_ID="7"
[2026-01-09 13:55:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 13:55:16] ANSI_COLOR="0;31"
[2026-01-09 13:55:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 13:55:16] HOME_URL="https://www.centos.org/"
[2026-01-09 13:55:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 13:55:16] 
[2026-01-09 13:55:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 13:55:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 13:55:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 13:55:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 13:55:16] 
[2026-01-09 13:55:16] 2026-01-09 18:54:44,666 | INFO     | ***************************************
[2026-01-09 13:55:16] 2026-01-09 18:54:45,169 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-09 13:55:16] 2026-01-09 18:54:45,184 | INFO     | sufficient remaining disk space (28281143296 B)
[2026-01-09 13:55:16] 2026-01-09 18:54:45,184 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 13:55:16] 2026-01-09 18:54:45,185 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 13:55:16] 2026-01-09 18:54:45,185 | INFO     | update_server=False
[2026-01-09 13:55:16] 2026-01-09 18:54:45,185 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 13:55:16] 2026-01-09 18:54:45,185 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 13:55:16] 2026-01-09 18:54:45,186 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 13:55:16] 2026-01-09 18:54:45,186 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 13:55:16] 2026-01-09 18:54:45,186 | INFO     | aborting loop
[2026-01-09 13:55:16] 2026-01-09 18:54:45,538 | INFO     | all data control threads have been joined
[2026-01-09 13:55:16] 2026-01-09 18:54:46,188 | INFO     | [job] job monitor thread has finished
[2026-01-09 13:55:16] 2026-01-09 18:54:46,191 | INFO     | [job] retrieve thread has finished
[2026-01-09 13:55:16] 2026-01-09 18:54:46,191 | INFO     | [job] queue monitor thread has finished
[2026-01-09 13:55:16] 2026-01-09 18:54:46,300 | INFO     | [payload] failed_post thread has finished
[2026-01-09 13:55:16] 2026-01-09 18:54:46,377 | INFO     | all payload control threads have been joined
[2026-01-09 13:55:16] 2026-01-09 18:54:46,512 | INFO     | [job] validate thread has finished
[2026-01-09 13:55:16] 2026-01-09 18:54:46,518 | INFO     | [data] copytool_in thread has finished
[2026-01-09 13:55:16] 2026-01-09 18:54:46,518 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 13:55:16] 2026-01-09 18:54:46,530 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 13:55:16] 2026-01-09 18:54:46,543 | INFO     | [data] control thread has finished
[2026-01-09 13:55:16] 2026-01-09 18:54:46,547 | INFO     | all job control threads have been joined
[2026-01-09 13:55:16] 2026-01-09 18:54:47,056 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 13:55:16] 2026-01-09 18:54:47,166 | INFO     | [payload] validate_post thread has finished
[2026-01-09 13:55:16] 2026-01-09 18:54:47,233 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 13:55:16] 2026-01-09 18:54:47,235 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 13:55:16] 2026-01-09 18:54:47,381 | INFO     | [payload] control thread has finished
[2026-01-09 13:55:16] 2026-01-09 18:54:47,552 | INFO     | [job] control thread has finished
[2026-01-09 13:55:16] 2026-01-09 18:54:48,535 | INFO     | [data] copytool_out thread has finished
[2026-01-09 13:55:16] 2026-01-09 18:54:49,192 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 13:55:16] 2026-01-09 18:54:59,165 | INFO     | [monitor] cgroup control has ended
[2026-01-09 13:55:16] 2026-01-09 18:54:59,716 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139954936723264)>', '<ExcThread(monitor, started 139954487273216)>']
[2026-01-09 13:55:16] 2026-01-09 18:55:04,741 | INFO     | all workflow threads have been joined
[2026-01-09 13:55:16] 2026-01-09 18:55:04,742 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 13:55:16] 2026-01-09 18:55:04,742 | INFO     | traces error code: 0
[2026-01-09 13:55:16] 2026-01-09 18:55:04,742 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 13:55:16] 2026-01-09 18:55:15,801 | INFO     | PID=1754 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 13:55:16] 2026-01-09 18:55:15,801 | INFO     | .. there are 2 such processes running
[2026-01-09 13:55:16] 2026-01-09 18:55:15,801 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 13:55:16] 2026-01-09 18:55:15,801 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 13:55:16] 2026-01-09 18:55:15,802 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 13:55:16] 2026-01-09 18:55:15,802 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 13:55:16] 2026-01-09 18:55:15,802 | INFO     | [monitor] control thread has ended
[2026-01-09 13:55:16] 2026-01-09 18:55:15,900 [wrapper] ==== pilot stdout END ====
[2026-01-09 13:55:16] 2026-01-09 18:55:15,904 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 13:55:16] 2026-01-09 18:55:15,908 [wrapper] pilotpid: 1754
[2026-01-09 13:55:16] 2026-01-09 18:55:15,911 [wrapper] Pilot exit status: 0
[2026-01-09 13:55:16] 2026-01-09 18:55:15,923 [wrapper] pandaids: 6963167245
[2026-01-09 13:55:16] 2026-01-09 18:55:15,965 [wrapper] cleanup supervisor_pilot 30941 1755
[2026-01-09 13:55:16] 2026-01-09 18:55:15,968 [wrapper] Test setup, not cleaning
[2026-01-09 13:55:16] 2026-01-09 18:55:15,972 [wrapper] apfmon messages muted
[2026-01-09 13:55:16] 2026-01-09 18:55:15,976 [wrapper] ==== wrapper stdout END ====
[2026-01-09 13:55:16] 2026-01-09 18:55:15,979 [wrapper] ==== wrapper stderr END ====
[2026-01-09 13:55:16]  *** Error codes and diagnostics ***
[2026-01-09 13:55:16]     "exeErrorCode": 0,
[2026-01-09 13:55:16]     "exeErrorDiag": "",
[2026-01-09 13:55:16]     "pilotErrorCode": 0,
[2026-01-09 13:55:16]     "pilotErrorDiag": "",
[2026-01-09 13:55:16]  *** Listing of results directory ***
[2026-01-09 13:55:16] total 444772
[2026-01-09 13:55:16] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 19:57 pilot3.tar.gz
[2026-01-09 13:55:16] -rwx------ 1 boincer umatlas     36322 Jan  8 19:57 runpilot2-wrapper.sh
[2026-01-09 13:55:16] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 19:57 queuedata.json
[2026-01-09 13:55:16] -rw-r--r-- 1 boincer umatlas       100 Jan  9 09:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 13:55:16] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 09:26 run_atlas
[2026-01-09 13:55:16] -rw-r--r-- 1 boincer umatlas       105 Jan  9 09:26 job.xml
[2026-01-09 13:55:16] -rw-r--r-- 2 boincer umatlas 221166043 Jan  9 09:26 EVNT.47898824._001380.pool.root.1
[2026-01-09 13:55:16] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 09:26 start_atlas.sh
[2026-01-09 13:55:16] drwxrwx--x 2 boincer umatlas      4096 Jan  9 09:26 shared
[2026-01-09 13:55:16] -rw-r--r-- 2 boincer umatlas    592397 Jan  9 09:26 input.tar.gz
[2026-01-09 13:55:16] -rw-r--r-- 1 boincer umatlas         0 Jan  9 09:26 boinc_lockfile
[2026-01-09 13:55:16] -rw-r--r-- 1 boincer umatlas      2519 Jan  9 09:26 pandaJob.out
[2026-01-09 13:55:16] -rw------- 1 boincer umatlas        57 Jan  9 09:26 setup.sh.local
[2026-01-09 13:55:16] -rw------- 1 boincer umatlas    989377 Jan  9 09:26 agis_schedconf.cvmfs.json
[2026-01-09 13:55:16] drwx------ 5 boincer umatlas      4096 Jan  9 09:26 pilot3
[2026-01-09 13:55:16] -rw------- 1 boincer umatlas 224900853 Jan  9 13:54 HITS.47898826._035620.pool.root.1
[2026-01-09 13:55:16] -rw-r--r-- 1 boincer umatlas      5951 Jan  9 13:54 init_data.xml
[2026-01-09 13:55:16] -rw-r--r-- 1 boincer umatlas       531 Jan  9 13:54 boinc_task_state.xml
[2026-01-09 13:55:16] -rw------- 1 boincer umatlas        95 Jan  9 13:54 pilot_heartbeat.json
[2026-01-09 13:55:16] -rw------- 1 boincer umatlas      1054 Jan  9 13:54 memory_monitor_summary.json
[2026-01-09 13:55:16] -rw------- 1 boincer umatlas   1516240 Jan  9 13:54 agis_ddmendpoints.agis.ALL.json
[2026-01-09 13:55:16] -rw------- 1 boincer umatlas    500050 Jan  9 13:54 log.47898826._035620.job.log.tgz.1
[2026-01-09 13:55:16] -rw------- 1 boincer umatlas      7859 Jan  9 13:54 heartbeat.json
[2026-01-09 13:55:16] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 13:55 boinc_mmap_file
[2026-01-09 13:55:16] -rw-r--r-- 1 boincer umatlas        29 Jan  9 13:55 wrapper_checkpoint.txt
[2026-01-09 13:55:16] -rw------- 1 boincer umatlas       819 Jan  9 13:55 pilotlog.txt
[2026-01-09 13:55:16] -rw------- 1 boincer umatlas   2231897 Jan  9 13:55 log.47898826._035620.job.log.1
[2026-01-09 13:55:16] -rw------- 1 boincer umatlas       357 Jan  9 13:55 output.list
[2026-01-09 13:55:16] -rw-r--r-- 1 boincer umatlas       620 Jan  9 13:55 runtime_log
[2026-01-09 13:55:16] -rw------- 1 boincer umatlas   2754560 Jan  9 13:55 result.tar.gz
[2026-01-09 13:55:16] -rw-r--r-- 1 boincer umatlas      9338 Jan  9 13:55 runtime_log.err
[2026-01-09 13:55:16] -rw------- 1 boincer umatlas       661 Jan  9 13:55 6TrMDmnzFy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm8olKDmutltsn.diag
[2026-01-09 13:55:16] -rw-r--r-- 1 boincer umatlas     21131 Jan  9 13:55 stderr.txt
[2026-01-09 13:55:16] HITS file was successfully produced:
[2026-01-09 13:55:16] -rw------- 1 boincer umatlas 224900853 Jan  9 13:54 shared/HITS.pool.root.1
[2026-01-09 13:55:16]  *** Contents of shared directory: ***
[2026-01-09 13:55:16] total 438908
[2026-01-09 13:55:16] -rw-r--r-- 2 boincer umatlas 221166043 Jan  9 09:26 ATLAS.root_0
[2026-01-09 13:55:16] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 09:26 start_atlas.sh
[2026-01-09 13:55:16] -rw-r--r-- 2 boincer umatlas    592397 Jan  9 09:26 input.tar.gz
[2026-01-09 13:55:16] -rw------- 1 boincer umatlas 224900853 Jan  9 13:54 HITS.pool.root.1
[2026-01-09 13:55:16] -rw------- 1 boincer umatlas   2754560 Jan  9 13:55 result.tar.gz
13:55:17 (27309): run_atlas exited; CPU time 122606.462790
13:55:17 (27309): called boinc_finish(0)

</stderr_txt>
]]>

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