Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:26:15 (26751): wrapper (7.7.26015): starting
09:26:15 (26751): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 09:26:15] Arguments: --nthreads 8
[2026-01-09 09:26:15] Threads: 8
[2026-01-09 09:26:15] Checking for CVMFS
[2026-01-09 09:26:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 09:26:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 09:26:15] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 09:26:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 09:26:15] 2.11.2.0 14221 181145 133400 154946 1 56 10238517 18432000 93 130560 0 122053881 99.980 6961971 32160 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 09:26:15] CVMFS is ok
[2026-01-09 09:26:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 09:26:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 09:26:15] Further information can be found at the LHC@home message board.
[2026-01-09 09:26:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 09:26:15] Checking for apptainer binary...
[2026-01-09 09:26:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 09:26:15] Running /usr/bin/apptainer --version
[2026-01-09 09:26:16] apptainer version 1.3.2-1.el7
[2026-01-09 09:26:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 09:26:17] c-206-9.aglt2.org
[2026-01-09 09:26:17] apptainer works
[2026-01-09 09:26:17] Set ATHENA_PROC_NUMBER=8
[2026-01-09 09:26:17] Set ATHENA_CORE_NUMBER=8
[2026-01-09 09:26:17] Starting ATLAS job with PandaID=6963165642
[2026-01-09 09:26:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 13:55:04]  *** The last 200 lines of the pilot log: ***
[2026-01-09 13:55:04] 2026-01-09 18:54:04,789 | INFO     | time since job start (16053s) is within the limit (349056.0s)
[2026-01-09 13:55:04] 2026-01-09 18:54:05,629 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 13:55:04] 2026-01-09 18:54:05,633 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 1701.375
[2026-01-09 13:55:04] 2026-01-09 18:54:05,636 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963165642/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 13:55:04] 2026-01-09 18:54:05,637 | INFO     | extracted standard info from prmon json
[2026-01-09 13:55:04] 2026-01-09 18:54:05,637 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 13:55:04] 2026-01-09 18:54:05,637 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 13:55:04] 2026-01-09 18:54:05,638 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 13:55:04] 2026-01-09 18:54:05,638 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 13:55:04] 2026-01-09 18:54:05,642 | INFO     | fitting pss+swap vs Time
[2026-01-09 13:55:04] 2026-01-09 18:54:05,643 | INFO     | sum of square deviations: 5640782972.0
[2026-01-09 13:55:04] 2026-01-09 18:54:05,645 | INFO     | sum of deviations: 39512008789.0
[2026-01-09 13:55:04] 2026-01-09 18:54:05,645 | INFO     | mean x: 1767976809.0
[2026-01-09 13:55:04] 2026-01-09 18:54:05,645 | INFO     | mean y: 2492460.608365019
[2026-01-09 13:55:04] 2026-01-09 18:54:05,645 | INFO     | intersect: -12381659803.840107
[2026-01-09 13:55:04] 2026-01-09 18:54:05,645 | INFO     | chi2: 1.3774098086677222
[2026-01-09 13:55:04] 2026-01-09 18:54:05,646 | INFO     | sum of square deviations: 5325139844.5
[2026-01-09 13:55:04] 2026-01-09 18:54:05,647 | INFO     | sum of deviations: 38608352135.5
[2026-01-09 13:55:04] 2026-01-09 18:54:05,648 | INFO     | mean x: 1767976656.5
[2026-01-09 13:55:04] 2026-01-09 18:54:05,648 | INFO     | mean y: 2492024.1666666665
[2026-01-09 13:55:04] 2026-01-09 18:54:05,648 | INFO     | intersect: -12815700044.910353
[2026-01-09 13:55:04] 2026-01-09 18:54:05,648 | INFO     | chi2: 1.3778496870096397
[2026-01-09 13:55:04] 2026-01-09 18:54:05,648 | INFO     | current chi2=1.3778496870096397 (change=-0.03193518291720053 %)
[2026-01-09 13:55:04] 2026-01-09 18:54:05,648 | INFO     | right removable region: 257
[2026-01-09 13:55:04] 2026-01-09 18:54:05,649 | INFO     | sum of square deviations: 5325139844.5
[2026-01-09 13:55:04] 2026-01-09 18:54:05,650 | INFO     | sum of deviations: -145133548.49999964
[2026-01-09 13:55:04] 2026-01-09 18:54:05,650 | INFO     | mean x: 1767976961.5
[2026-01-09 13:55:04] 2026-01-09 18:54:05,651 | INFO     | mean y: 2511467.430232558
[2026-01-09 13:55:04] 2026-01-09 18:54:05,651 | INFO     | intersect: 50696637.69458921
[2026-01-09 13:55:04] 2026-01-09 18:54:05,651 | INFO     | chi2: 0.026753552706337894
[2026-01-09 13:55:04] 2026-01-09 18:54:05,651 | INFO     | current chi2=0.026753552706337894 (change=98.05769114333411 %)
[2026-01-09 13:55:04] 2026-01-09 18:54:05,652 | INFO     | sum of square deviations: 5021496942.0
[2026-01-09 13:55:04] 2026-01-09 18:54:05,653 | INFO     | sum of deviations: -2778975047.999999
[2026-01-09 13:55:04] 2026-01-09 18:54:05,653 | INFO     | mean x: 1767977114.0
[2026-01-09 13:55:04] 2026-01-09 18:54:05,653 | INFO     | mean y: 2512770.04743083
[2026-01-09 13:55:04] 2026-01-09 18:54:05,653 | INFO     | intersect: 980938992.7435254
[2026-01-09 13:55:04] 2026-01-09 18:54:05,654 | INFO     | chi2: 0.011616113025120047
[2026-01-09 13:55:04] 2026-01-09 18:54:05,654 | INFO     | current chi2=0.011616113025120047 (change=56.58104494522629 %)
[2026-01-09 13:55:04] 2026-01-09 18:54:05,654 | INFO     | sum of square deviations: 4729621702.0
[2026-01-09 13:55:04] 2026-01-09 18:54:05,656 | INFO     | sum of deviations: -2059208506.500001
[2026-01-09 13:55:04] 2026-01-09 18:54:05,656 | INFO     | mean x: 1767977266.5
[2026-01-09 13:55:04] 2026-01-09 18:54:05,656 | INFO     | mean y: 2512393.1975806453
[2026-01-09 13:55:04] 2026-01-09 18:54:05,656 | INFO     | intersect: 772263983.464497
[2026-01-09 13:55:04] 2026-01-09 18:54:05,657 | INFO     | chi2: 0.011435972370447564
[2026-01-09 13:55:04] 2026-01-09 18:54:05,657 | INFO     | current chi2=0.011435972370447564 (change=1.5507825576673204 %)
[2026-01-09 13:55:04] 2026-01-09 18:54:05,657 | INFO     | left removable region: 30
[2026-01-09 13:55:04] 2026-01-09 18:54:05,657 | INFO     | sum of square deviations: 3627000098.0
[2026-01-09 13:55:04] 2026-01-09 18:54:05,658 | INFO     | sum of deviations: 2575534619.0
[2026-01-09 13:55:04] 2026-01-09 18:54:05,659 | INFO     | mean x: 1767977541.0
[2026-01-09 13:55:04] 2026-01-09 18:54:05,659 | INFO     | mean y: 2509486.396475771
[2026-01-09 13:55:04] 2026-01-09 18:54:05,659 | INFO     | intersect: -1252932266.9607615
[2026-01-09 13:55:04] 2026-01-09 18:54:05,659 | INFO     | chi2: 0.0064891354705357476
[2026-01-09 13:55:04] 2026-01-09 18:54:05,659 | INFO     | current memory leak: 0.71 B/s (using 227 data points, chi2=0.01)
[2026-01-09 13:55:04] 2026-01-09 18:54:05,660 | INFO     | could have reported an average CPU frequency of 2354 MHz (12 samples)
[2026-01-09 13:55:04] 2026-01-09 18:54:05,660 | INFO     | ..............................
[2026-01-09 13:55:04] 2026-01-09 18:54:05,660 | INFO     | . Timing measurements:
[2026-01-09 13:55:04] 2026-01-09 18:54:05,660 | INFO     | . get job = 0 s
[2026-01-09 13:55:04] 2026-01-09 18:54:05,660 | INFO     | . initial setup = 2 s
[2026-01-09 13:55:04] 2026-01-09 18:54:05,660 | INFO     | . payload setup = 6 s
[2026-01-09 13:55:04] 2026-01-09 18:54:05,661 | INFO     | . stage-in = 0 s
[2026-01-09 13:55:04] 2026-01-09 18:54:05,661 | INFO     | . payload execution = 16020 s
[2026-01-09 13:55:04] 2026-01-09 18:54:05,661 | INFO     | . stage-out = 2 s
[2026-01-09 13:55:04] 2026-01-09 18:54:05,661 | INFO     | . log creation = 0 s
[2026-01-09 13:55:04] 2026-01-09 18:54:05,661 | INFO     | ..............................
[2026-01-09 13:55:04] 2026-01-09 18:54:05,990 | INFO     | 
[2026-01-09 13:55:04] 2026-01-09 18:54:05,991 | INFO     | job summary report
[2026-01-09 13:55:04] 2026-01-09 18:54:05,991 | INFO     | --------------------------------------------------
[2026-01-09 13:55:04] 2026-01-09 18:54:05,991 | INFO     | PanDA job id: 6963165642
[2026-01-09 13:55:04] 2026-01-09 18:54:05,991 | INFO     | task id: 47898826
[2026-01-09 13:55:04] 2026-01-09 18:54:05,991 | INFO     | errors: (none)
[2026-01-09 13:55:04] 2026-01-09 18:54:05,992 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 13:55:04] 2026-01-09 18:54:05,992 | INFO     | pilot state: finished 
[2026-01-09 13:55:04] 2026-01-09 18:54:05,992 | INFO     | transexitcode: 0
[2026-01-09 13:55:04] 2026-01-09 18:54:05,992 | INFO     | exeerrorcode: 0
[2026-01-09 13:55:04] 2026-01-09 18:54:05,992 | INFO     | exeerrordiag: 
[2026-01-09 13:55:04] 2026-01-09 18:54:05,992 | INFO     | exitcode: 0
[2026-01-09 13:55:04] 2026-01-09 18:54:05,993 | INFO     | exitmsg: OK
[2026-01-09 13:55:04] 2026-01-09 18:54:05,993 | INFO     | cpuconsumptiontime: 123221 s
[2026-01-09 13:55:04] 2026-01-09 18:54:05,993 | INFO     | nevents: 400
[2026-01-09 13:55:04] 2026-01-09 18:54:05,993 | INFO     | neventsw: 0
[2026-01-09 13:55:04] 2026-01-09 18:54:05,993 | INFO     | pid: 14254
[2026-01-09 13:55:04] 2026-01-09 18:54:05,993 | INFO     | pgrp: 14254
[2026-01-09 13:55:04] 2026-01-09 18:54:05,993 | INFO     | corecount: 8
[2026-01-09 13:55:04] 2026-01-09 18:54:05,994 | INFO     | event service: False
[2026-01-09 13:55:04] 2026-01-09 18:54:05,994 | INFO     | sizes: {0: 2283971, 5: 2284233, 11: 2284289, 16031: 2315497, 16034: 2324551, 16039: 2324689}
[2026-01-09 13:55:04] 2026-01-09 18:54:05,994 | INFO     | --------------------------------------------------
[2026-01-09 13:55:04] 2026-01-09 18:54:05,994 | INFO     | 
[2026-01-09 13:55:04] 2026-01-09 18:54:05,994 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-09 13:55:04] 2026-01-09 18:54:06,016 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 13:55:04] 2026-01-09 18:54:06,017 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 13:55:04] 2026-01-09 18:54:06,017 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 13:55:04] 2026-01-09 18:54:06,017 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 13:55:04] 2026-01-09 18:54:06,017 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 13:55:04] 2026-01-09 18:54:06,017 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 13:55:04] 2026-01-09 18:54:06,017 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 13:55:04] 2026-01-09 18:54:06,018 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 13:55:04] 2026-01-09 18:54:06,018 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 13:55:04] 2026-01-09 18:54:06,018 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 13:55:04] 2026-01-09 18:54:06,018 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 13:55:04] 2026-01-09 18:54:06,018 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 13:55:04] 2026-01-09 18:54:06,018 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 13:55:04] 2026-01-09 18:54:06,019 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 13:55:04] 2026-01-09 18:54:06,019 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 13:55:04] 2026-01-09 18:54:06,019 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 13:55:04] 2026-01-09 18:54:06,019 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 13:55:04] 2026-01-09 18:54:06,019 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 13:55:04] 2026-01-09 18:54:06,019 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 13:55:04] 2026-01-09 18:54:06,019 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 13:55:04] 2026-01-09 18:54:06,020 | INFO     | job 6963165642 has completed (purged errors)
[2026-01-09 13:55:04] 2026-01-09 18:54:06,020 | INFO     | overall cleanup function is called
[2026-01-09 13:55:04] 2026-01-09 18:54:07,026 | INFO     | --- collectZombieJob: --- 10, [14254]
[2026-01-09 13:55:04] 2026-01-09 18:54:07,026 | INFO     | zombie collector waiting for pid 14254
[2026-01-09 13:55:04] 2026-01-09 18:54:07,027 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 13:55:04] 2026-01-09 18:54:07,027 | INFO     | collected zombie processes
[2026-01-09 13:55:04] 2026-01-09 18:54:07,027 | INFO     | will attempt to kill all subprocesses of pid=14254
[2026-01-09 13:55:04] 2026-01-09 18:54:07,130 | INFO     | process IDs to be killed: [14254] (in reverse order)
[2026-01-09 13:55:04] 2026-01-09 18:54:07,181 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 13:55:04] 2026-01-09 18:54:07,181 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 13:55:04] 2026-01-09 18:54:07,185 | INFO     | did not find any defunct processes belonging to 14254
[2026-01-09 13:55:04] 2026-01-09 18:54:07,189 | INFO     | did not find any defunct processes belonging to 14254
[2026-01-09 13:55:04] 2026-01-09 18:54:07,189 | INFO     | ready for new job
[2026-01-09 13:55:04] 2026-01-09 18:54:07,189 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 13:55:04] 2026-01-09 18:54:07,191 | INFO     | ***************************************
[2026-01-09 13:55:04] 2026-01-09 18:54:07,192 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 13:55:04] 2026-01-09 18:54:07,192 | INFO     | ***************************************
[2026-01-09 13:55:04] 2026-01-09 18:54:07,192 | INFO     | 
[2026-01-09 13:55:04] 2026-01-09 18:54:07,193 | INFO     | architecture information:
[2026-01-09 13:55:04] 2026-01-09 18:54:07,193 | INFO     | executing command: cat /etc/os-release
[2026-01-09 13:55:04] 2026-01-09 18:54:07,207 | INFO     | cat /etc/os-release:
[2026-01-09 13:55:04] NAME="CentOS Linux"
[2026-01-09 13:55:04] VERSION="7 (Core)"
[2026-01-09 13:55:04] ID="centos"
[2026-01-09 13:55:04] ID_LIKE="rhel fedora"
[2026-01-09 13:55:04] VERSION_ID="7"
[2026-01-09 13:55:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 13:55:04] ANSI_COLOR="0;31"
[2026-01-09 13:55:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 13:55:04] HOME_URL="https://www.centos.org/"
[2026-01-09 13:55:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 13:55:04] 
[2026-01-09 13:55:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 13:55:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 13:55:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 13:55:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 13:55:04] 
[2026-01-09 13:55:04] 2026-01-09 18:54:07,207 | INFO     | ***************************************
[2026-01-09 13:55:04] 2026-01-09 18:54:07,710 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-09 13:55:04] 2026-01-09 18:54:07,728 | INFO     | sufficient remaining disk space (28729933824 B)
[2026-01-09 13:55:04] 2026-01-09 18:54:07,728 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 13:55:04] 2026-01-09 18:54:07,729 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 13:55:04] 2026-01-09 18:54:07,729 | INFO     | update_server=False
[2026-01-09 13:55:04] 2026-01-09 18:54:07,729 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 13:55:04] 2026-01-09 18:54:07,729 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 13:55:04] 2026-01-09 18:54:07,730 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 13:55:04] 2026-01-09 18:54:07,730 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 13:55:04] 2026-01-09 18:54:08,013 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 13:55:04] 2026-01-09 18:54:08,014 | INFO     | aborting loop
[2026-01-09 13:55:04] 2026-01-09 18:54:08,659 | INFO     | all data control threads have been joined
[2026-01-09 13:55:04] 2026-01-09 18:54:08,731 | INFO     | [job] queue monitor thread has finished
[2026-01-09 13:55:04] 2026-01-09 18:54:08,734 | INFO     | [job] retrieve thread has finished
[2026-01-09 13:55:04] 2026-01-09 18:54:08,919 | INFO     | all payload control threads have been joined
[2026-01-09 13:55:04] 2026-01-09 18:54:09,019 | INFO     | [job] job monitor thread has finished
[2026-01-09 13:55:04] 2026-01-09 18:54:09,368 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 13:55:04] 2026-01-09 18:54:09,406 | INFO     | all job control threads have been joined
[2026-01-09 13:55:04] 2026-01-09 18:54:09,480 | INFO     | [data] copytool_in thread has finished
[2026-01-09 13:55:04] 2026-01-09 18:54:09,488 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 13:55:04] 2026-01-09 18:54:09,523 | INFO     | [payload] failed_post thread has finished
[2026-01-09 13:55:04] 2026-01-09 18:54:09,664 | INFO     | [data] control thread has finished
[2026-01-09 13:55:04] 2026-01-09 18:54:09,735 | INFO     | [data] copytool_out thread has finished
[2026-01-09 13:55:04] 2026-01-09 18:54:09,924 | INFO     | [payload] control thread has finished
[2026-01-09 13:55:04] 2026-01-09 18:54:10,148 | INFO     | [job] validate thread has finished
[2026-01-09 13:55:04] 2026-01-09 18:54:10,212 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 13:55:04] 2026-01-09 18:54:10,235 | INFO     | [payload] validate_post thread has finished
[2026-01-09 13:55:04] 2026-01-09 18:54:10,411 | INFO     | [job] control thread has finished
[2026-01-09 13:55:04] 2026-01-09 18:54:11,736 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 13:55:04] 2026-01-09 18:54:18,684 | INFO     | job.realtimelogging is not enabled
[2026-01-09 13:55:04] 2026-01-09 18:54:19,689 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 13:55:04] 2026-01-09 18:54:37,998 | INFO     | PID=693 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2026-01-09 13:55:04] 2026-01-09 18:54:37,999 | INFO     | .. there are 2 such processes running
[2026-01-09 13:55:04] 2026-01-09 18:54:37,999 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 13:55:04] 2026-01-09 18:54:37,999 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 13:55:04] 2026-01-09 18:54:38,000 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 13:55:04] 2026-01-09 18:54:57,629 | INFO     | [monitor] cgroup control has ended
[2026-01-09 13:55:04] 2026-01-09 18:54:59,502 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140003886044992)>', '<ExcThread(monitor, started 140003292202752)>']
[2026-01-09 13:55:04] 2026-01-09 18:55:00,110 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 13:55:04] 2026-01-09 18:55:00,110 | INFO     | [monitor] control thread has ended
[2026-01-09 13:55:04] 2026-01-09 18:55:04,511 | INFO     | all workflow threads have been joined
[2026-01-09 13:55:04] 2026-01-09 18:55:04,511 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 13:55:04] 2026-01-09 18:55:04,511 | INFO     | traces error code: 0
[2026-01-09 13:55:04] 2026-01-09 18:55:04,512 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 13:55:04] 2026-01-09 18:55:04,606 [wrapper] ==== pilot stdout END ====
[2026-01-09 13:55:04] 2026-01-09 18:55:04,610 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 13:55:04] 2026-01-09 18:55:04,613 [wrapper] pilotpid: 693
[2026-01-09 13:55:04] 2026-01-09 18:55:04,617 [wrapper] Pilot exit status: 0
[2026-01-09 13:55:04] 2026-01-09 18:55:04,630 [wrapper] pandaids: 6963165642
[2026-01-09 13:55:04] 2026-01-09 18:55:04,667 [wrapper] cleanup supervisor_pilot 30936 694
[2026-01-09 13:55:04] 2026-01-09 18:55:04,670 [wrapper] Test setup, not cleaning
[2026-01-09 13:55:04] 2026-01-09 18:55:04,674 [wrapper] apfmon messages muted
[2026-01-09 13:55:04] 2026-01-09 18:55:04,678 [wrapper] ==== wrapper stdout END ====
[2026-01-09 13:55:04] 2026-01-09 18:55:04,682 [wrapper] ==== wrapper stderr END ====
[2026-01-09 13:55:04]  *** Error codes and diagnostics ***
[2026-01-09 13:55:04]     "exeErrorCode": 0,
[2026-01-09 13:55:04]     "exeErrorDiag": "",
[2026-01-09 13:55:04]     "pilotErrorCode": 0,
[2026-01-09 13:55:04]     "pilotErrorDiag": "",
[2026-01-09 13:55:04]  *** Listing of results directory ***
[2026-01-09 13:55:04] total 446432
[2026-01-09 13:55:04] -rwx------ 1 boincer umatlas     36322 Jan  8 19:56 runpilot2-wrapper.sh
[2026-01-09 13:55:04] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 19:57 pilot3.tar.gz
[2026-01-09 13:55:04] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 19:57 queuedata.json
[2026-01-09 13:55:04] -rw-r--r-- 1 boincer umatlas       100 Jan  9 09:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 13:55:04] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 09:26 run_atlas
[2026-01-09 13:55:04] -rw-r--r-- 1 boincer umatlas       105 Jan  9 09:26 job.xml
[2026-01-09 13:55:04] -rw-r--r-- 2 boincer umatlas 224020505 Jan  9 09:26 EVNT.47898824._001350.pool.root.1
[2026-01-09 13:55:04] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 09:26 start_atlas.sh
[2026-01-09 13:55:04] drwxrwx--x 2 boincer umatlas      4096 Jan  9 09:26 shared
[2026-01-09 13:55:04] -rw-r--r-- 2 boincer umatlas    592397 Jan  9 09:26 input.tar.gz
[2026-01-09 13:55:04] -rw-r--r-- 1 boincer umatlas         0 Jan  9 09:26 boinc_lockfile
[2026-01-09 13:55:04] -rw-r--r-- 1 boincer umatlas      2520 Jan  9 09:26 pandaJob.out
[2026-01-09 13:55:04] -rw------- 1 boincer umatlas        57 Jan  9 09:26 setup.sh.local
[2026-01-09 13:55:04] -rw------- 1 boincer umatlas    989377 Jan  9 09:26 agis_schedconf.cvmfs.json
[2026-01-09 13:55:04] drwx------ 5 boincer umatlas      4096 Jan  9 09:26 pilot3
[2026-01-09 13:55:04] -rw------- 1 boincer umatlas 223778589 Jan  9 13:53 HITS.47898826._034861.pool.root.1
[2026-01-09 13:55:04] -rw-r--r-- 1 boincer umatlas       531 Jan  9 13:53 boinc_task_state.xml
[2026-01-09 13:55:04] -rw------- 1 boincer umatlas      1079 Jan  9 13:53 memory_monitor_summary.json
[2026-01-09 13:55:04] -rw------- 1 boincer umatlas   1516240 Jan  9 13:54 agis_ddmendpoints.agis.ALL.json
[2026-01-09 13:55:04] -rw------- 1 boincer umatlas    486899 Jan  9 13:54 log.47898826._034861.job.log.tgz.1
[2026-01-09 13:55:04] -rw------- 1 boincer umatlas      7858 Jan  9 13:54 heartbeat.json
[2026-01-09 13:55:04] -rw-r--r-- 1 boincer umatlas      5951 Jan  9 13:54 init_data.xml
[2026-01-09 13:55:04] -rw------- 1 boincer umatlas        95 Jan  9 13:54 pilot_heartbeat.json
[2026-01-09 13:55:04] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 13:55 boinc_mmap_file
[2026-01-09 13:55:04] -rw-r--r-- 1 boincer umatlas        29 Jan  9 13:55 wrapper_checkpoint.txt
[2026-01-09 13:55:04] -rw------- 1 boincer umatlas      4891 Jan  9 13:55 pilotlog.txt
[2026-01-09 13:55:04] -rw------- 1 boincer umatlas   2225184 Jan  9 13:55 log.47898826._034861.job.log.1
[2026-01-09 13:55:04] -rw------- 1 boincer umatlas       357 Jan  9 13:55 output.list
[2026-01-09 13:55:04] -rw-r--r-- 1 boincer umatlas       620 Jan  9 13:55 runtime_log
[2026-01-09 13:55:04] -rw------- 1 boincer umatlas   2734080 Jan  9 13:55 result.tar.gz
[2026-01-09 13:55:04] -rw-r--r-- 1 boincer umatlas      9338 Jan  9 13:55 runtime_log.err
[2026-01-09 13:55:04] -rw------- 1 boincer umatlas       662 Jan  9 13:55 pghLDmEzFy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm8klKDmBZVEAo.diag
[2026-01-09 13:55:04] -rw-r--r-- 1 boincer umatlas     21017 Jan  9 13:55 stderr.txt
[2026-01-09 13:55:04] HITS file was successfully produced:
[2026-01-09 13:55:04] -rw------- 1 boincer umatlas 223778589 Jan  9 13:53 shared/HITS.pool.root.1
[2026-01-09 13:55:04]  *** Contents of shared directory: ***
[2026-01-09 13:55:04] total 440584
[2026-01-09 13:55:04] -rw-r--r-- 2 boincer umatlas 224020505 Jan  9 09:26 ATLAS.root_0
[2026-01-09 13:55:04] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 09:26 start_atlas.sh
[2026-01-09 13:55:04] -rw-r--r-- 2 boincer umatlas    592397 Jan  9 09:26 input.tar.gz
[2026-01-09 13:55:04] -rw------- 1 boincer umatlas 223778589 Jan  9 13:53 HITS.pool.root.1
[2026-01-09 13:55:04] -rw------- 1 boincer umatlas   2734080 Jan  9 13:55 result.tar.gz
13:55:06 (26751): run_atlas exited; CPU time 123414.291270
13:55:06 (26751): called boinc_finish(0)

</stderr_txt>
]]>

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