Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:48:58 (2934803): wrapper (7.7.26015): starting
09:48:58 (2934803): wrapper: running run_atlas (--nthreads 9)
[2026-01-09 09:48:58] Arguments: --nthreads 9
[2026-01-09 09:48:58] Threads: 9
[2026-01-09 09:48:58] Checking for CVMFS
[2026-01-09 09:48:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 09:48:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 09:48:59] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 09:48:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 09:48:59] 2.13.3.0 2033223 17043 216272 154946 2 815 28062321 40960001 24108 16776704 0 67248641 99.620 71998904 36117 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 09:48:59] CVMFS is ok
[2026-01-09 09:48:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 09:48:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 09:48:59] Further information can be found at the LHC@home message board.
[2026-01-09 09:48:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 09:48:59] Checking for apptainer binary...
[2026-01-09 09:48:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 09:48:59] Running /usr/bin/apptainer --version
[2026-01-09 09:48:59] apptainer version 1.4.5-2.el9
[2026-01-09 09:48:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 09:48:59] c-212-17.aglt2.org
[2026-01-09 09:48:59] apptainer works
[2026-01-09 09:48:59] Set ATHENA_PROC_NUMBER=9
[2026-01-09 09:48:59] Set ATHENA_CORE_NUMBER=9
[2026-01-09 09:48:59] Starting ATLAS job with PandaID=6963167169
[2026-01-09 09:48:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 15:09:08]  *** The last 200 lines of the pilot log: ***
[2026-01-09 15:09:08] 2026-01-09 20:08:05,240 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 15:09:08] 2026-01-09 20:08:06,334 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 15:09:08] 2026-01-09 20:08:06,350 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3215.883947916667
[2026-01-09 15:09:08] 2026-01-09 20:08:06,363 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6963167169/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 15:09:08] 2026-01-09 20:08:06,364 | INFO     | extracted standard info from prmon json
[2026-01-09 15:09:08] 2026-01-09 20:08:06,364 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 15:09:08] 2026-01-09 20:08:06,364 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 15:09:08] 2026-01-09 20:08:06,364 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 15:09:08] 2026-01-09 20:08:06,364 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 15:09:08] 2026-01-09 20:08:06,368 | INFO     | fitting pss+swap vs Time
[2026-01-09 15:09:08] 2026-01-09 20:08:06,369 | INFO     | sum of square deviations: 9508447597.795574
[2026-01-09 15:09:08] 2026-01-09 20:08:06,371 | INFO     | sum of deviations: 215705596412.7827
[2026-01-09 15:09:08] 2026-01-09 20:08:06,371 | INFO     | mean x: 1767979746.0255592
[2026-01-09 15:09:08] 2026-01-09 20:08:06,371 | INFO     | mean y: 2417966.5271565495
[2026-01-09 15:09:08] 2026-01-09 20:08:06,371 | INFO     | intersect: -40105404224.19282
[2026-01-09 15:09:08] 2026-01-09 20:08:06,371 | INFO     | chi2: 7.859864211963603
[2026-01-09 15:09:08] 2026-01-09 20:08:06,372 | INFO     | sum of square deviations: 9060013722.792213
[2026-01-09 15:09:08] 2026-01-09 20:08:06,374 | INFO     | sum of deviations: 297391005622.4027
[2026-01-09 15:09:08] 2026-01-09 20:08:06,374 | INFO     | mean x: 1767979593.525974
[2026-01-09 15:09:08] 2026-01-09 20:08:06,374 | INFO     | mean y: 2445652.824675325
[2026-01-09 15:09:08] 2026-01-09 20:08:06,374 | INFO     | intersect: -58030714707.17257
[2026-01-09 15:09:08] 2026-01-09 20:08:06,374 | INFO     | chi2: 4.484904156823642
[2026-01-09 15:09:08] 2026-01-09 20:08:06,374 | INFO     | current chi2=4.484904156823642 (change=42.93916490316575 %)
[2026-01-09 15:09:08] 2026-01-09 20:08:06,374 | INFO     | sum of square deviations: 8625905697.788748
[2026-01-09 15:09:08] 2026-01-09 20:08:06,376 | INFO     | sum of deviations: 291726469311.37616
[2026-01-09 15:09:08] 2026-01-09 20:08:06,376 | INFO     | mean x: 1767979441.0264027
[2026-01-09 15:09:08] 2026-01-09 20:08:06,377 | INFO     | mean y: 2443662.702970297
[2026-01-09 15:09:08] 2026-01-09 20:08:06,377 | INFO     | intersect: -59790280512.09872
[2026-01-09 15:09:08] 2026-01-09 20:08:06,377 | INFO     | chi2: 4.468063679342885
[2026-01-09 15:09:08] 2026-01-09 20:08:06,377 | INFO     | current chi2=4.468063679342885 (change=0.37549247189898316 %)
[2026-01-09 15:09:08] 2026-01-09 20:08:06,377 | INFO     | right removable region: 302
[2026-01-09 15:09:08] 2026-01-09 20:08:06,377 | INFO     | sum of square deviations: 9060008842.792215
[2026-01-09 15:09:08] 2026-01-09 20:08:06,379 | INFO     | sum of deviations: 127415445236.49344
[2026-01-09 15:09:08] 2026-01-09 20:08:06,379 | INFO     | mean x: 1767979898.525974
[2026-01-09 15:09:08] 2026-01-09 20:08:06,379 | INFO     | mean y: 2447951.688311688
[2026-01-09 15:09:08] 2026-01-09 20:08:06,379 | INFO     | intersect: -24861539473.56368
[2026-01-09 15:09:08] 2026-01-09 20:08:06,380 | INFO     | chi2: 4.927870544384481
[2026-01-09 15:09:08] 2026-01-09 20:08:06,380 | INFO     | current chi2=4.927870544384481 (change=37.303362863652225 %)
[2026-01-09 15:09:08] 2026-01-09 20:08:06,380 | INFO     | sum of square deviations: 8625895937.788748
[2026-01-09 15:09:08] 2026-01-09 20:08:06,382 | INFO     | sum of deviations: 86030296116.25409
[2026-01-09 15:09:08] 2026-01-09 20:08:06,382 | INFO     | mean x: 1767980051.0264027
[2026-01-09 15:09:08] 2026-01-09 20:08:06,382 | INFO     | mean y: 2462443.3432343234
[2026-01-09 15:09:08] 2026-01-09 20:08:06,382 | INFO     | intersect: -17630470809.54995
[2026-01-09 15:09:08] 2026-01-09 20:08:06,383 | INFO     | chi2: 4.321266619608885
[2026-01-09 15:09:08] 2026-01-09 20:08:06,383 | INFO     | current chi2=4.321266619608885 (change=12.309656256430019 %)
[2026-01-09 15:09:08] 2026-01-09 20:08:06,383 | INFO     | left removable region: 20
[2026-01-09 15:09:08] 2026-01-09 20:08:06,383 | INFO     | sum of square deviations: 6953822284.27303
[2026-01-09 15:09:08] 2026-01-09 20:08:06,385 | INFO     | sum of deviations: 107431290231.3865
[2026-01-09 15:09:08] 2026-01-09 20:08:06,385 | INFO     | mean x: 1767980020.5283687
[2026-01-09 15:09:08] 2026-01-09 20:08:06,385 | INFO     | mean y: 2512443.514184397
[2026-01-09 15:09:08] 2026-01-09 20:08:06,385 | INFO     | intersect: -27311440508.41005
[2026-01-09 15:09:08] 2026-01-09 20:08:06,385 | INFO     | chi2: 0.44207893689720945
[2026-01-09 15:09:08] 2026-01-09 20:08:06,385 | INFO     | current memory leak: 15.45 B/s (using 282 data points, chi2=0.44)
[2026-01-09 15:09:08] 2026-01-09 20:08:06,386 | INFO     | could have reported an average CPU frequency of 3261 MHz (14 samples)
[2026-01-09 15:09:08] 2026-01-09 20:08:06,386 | INFO     | ..............................
[2026-01-09 15:09:08] 2026-01-09 20:08:06,386 | INFO     | . Timing measurements:
[2026-01-09 15:09:08] 2026-01-09 20:08:06,386 | INFO     | . get job = 0 s
[2026-01-09 15:09:08] 2026-01-09 20:08:06,386 | INFO     | . initial setup = 5 s
[2026-01-09 15:09:08] 2026-01-09 20:08:06,386 | INFO     | . payload setup = 18 s
[2026-01-09 15:09:08] 2026-01-09 20:08:06,386 | INFO     | . stage-in = 0 s
[2026-01-09 15:09:08] 2026-01-09 20:08:06,386 | INFO     | . payload execution = 19050 s
[2026-01-09 15:09:08] 2026-01-09 20:08:06,386 | INFO     | . stage-out = 3 s
[2026-01-09 15:09:08] 2026-01-09 20:08:06,386 | INFO     | . log creation = 0 s
[2026-01-09 15:09:08] 2026-01-09 20:08:06,386 | INFO     | ..............................
[2026-01-09 15:09:08] 2026-01-09 20:08:06,443 | INFO     | time since job start (19118s) is within the limit (349056.0s)
[2026-01-09 15:09:08] 2026-01-09 20:08:06,509 | INFO     | 
[2026-01-09 15:09:08] 2026-01-09 20:08:06,510 | INFO     | job summary report
[2026-01-09 15:09:08] 2026-01-09 20:08:06,510 | INFO     | --------------------------------------------------
[2026-01-09 15:09:08] 2026-01-09 20:08:06,510 | INFO     | PanDA job id: 6963167169
[2026-01-09 15:09:08] 2026-01-09 20:08:06,510 | INFO     | task id: 47898826
[2026-01-09 15:09:08] 2026-01-09 20:08:06,510 | INFO     | errors: (none)
[2026-01-09 15:09:08] 2026-01-09 20:08:06,510 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 15:09:08] 2026-01-09 20:08:06,510 | INFO     | pilot state: finished 
[2026-01-09 15:09:08] 2026-01-09 20:08:06,511 | INFO     | transexitcode: 0
[2026-01-09 15:09:08] 2026-01-09 20:08:06,511 | INFO     | exeerrorcode: 0
[2026-01-09 15:09:08] 2026-01-09 20:08:06,512 | INFO     | exeerrordiag: 
[2026-01-09 15:09:08] 2026-01-09 20:08:06,512 | INFO     | exitcode: 0
[2026-01-09 15:09:08] 2026-01-09 20:08:06,512 | INFO     | exitmsg: OK
[2026-01-09 15:09:08] 2026-01-09 20:08:06,512 | INFO     | cpuconsumptiontime: 43369 s
[2026-01-09 15:09:08] 2026-01-09 20:08:06,512 | INFO     | nevents: 400
[2026-01-09 15:09:08] 2026-01-09 20:08:06,513 | INFO     | neventsw: 0
[2026-01-09 15:09:08] 2026-01-09 20:08:06,513 | INFO     | pid: 2972454
[2026-01-09 15:09:08] 2026-01-09 20:08:06,513 | INFO     | pgrp: 2972454
[2026-01-09 15:09:08] 2026-01-09 20:08:06,513 | INFO     | corecount: 9
[2026-01-09 15:09:08] 2026-01-09 20:08:06,513 | INFO     | event service: False
[2026-01-09 15:09:08] 2026-01-09 20:08:06,513 | INFO     | sizes: {0: 2283799, 1: 2283998, 12: 2283998, 14: 2284288, 23: 2284316, 19069: 2317591, 19073: 2326589, 19074: 2326645, 19087: 2326839}
[2026-01-09 15:09:08] 2026-01-09 20:08:06,513 | INFO     | --------------------------------------------------
[2026-01-09 15:09:08] 2026-01-09 20:08:06,513 | INFO     | 
[2026-01-09 15:09:08] 2026-01-09 20:08:06,513 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-01-09 15:09:08] 2026-01-09 20:08:06,538 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 15:09:08] 2026-01-09 20:08:06,539 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 15:09:08] 2026-01-09 20:08:06,539 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 15:09:08] 2026-01-09 20:08:06,539 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 15:09:08] 2026-01-09 20:08:06,539 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 15:09:08] 2026-01-09 20:08:06,539 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 15:09:08] 2026-01-09 20:08:06,539 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 15:09:08] 2026-01-09 20:08:06,539 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 15:09:08] 2026-01-09 20:08:06,539 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 15:09:08] 2026-01-09 20:08:06,539 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 15:09:08] 2026-01-09 20:08:06,539 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 15:09:08] 2026-01-09 20:08:06,539 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 15:09:08] 2026-01-09 20:08:06,539 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 15:09:08] 2026-01-09 20:08:06,539 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 15:09:08] 2026-01-09 20:08:06,539 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 15:09:08] 2026-01-09 20:08:06,540 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 15:09:08] 2026-01-09 20:08:06,540 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 15:09:08] 2026-01-09 20:08:06,540 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 15:09:08] 2026-01-09 20:08:06,540 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 15:09:08] 2026-01-09 20:08:06,540 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 15:09:08] 2026-01-09 20:08:06,540 | INFO     | job 6963167169 has completed (purged errors)
[2026-01-09 15:09:08] 2026-01-09 20:08:06,540 | INFO     | overall cleanup function is called
[2026-01-09 15:09:08] 2026-01-09 20:08:07,550 | INFO     | --- collectZombieJob: --- 10, [2972454]
[2026-01-09 15:09:08] 2026-01-09 20:08:07,550 | INFO     | zombie collector waiting for pid 2972454
[2026-01-09 15:09:08] 2026-01-09 20:08:07,550 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 15:09:08] 2026-01-09 20:08:07,550 | INFO     | collected zombie processes
[2026-01-09 15:09:08] 2026-01-09 20:08:07,550 | INFO     | will attempt to kill all subprocesses of pid=2972454
[2026-01-09 15:09:08] 2026-01-09 20:08:09,741 | INFO     | process IDs to be killed: [2972454] (in reverse order)
[2026-01-09 15:09:08] 2026-01-09 20:08:09,899 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 15:09:08] 2026-01-09 20:08:09,899 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 15:09:08] 2026-01-09 20:08:09,921 | INFO     | did not find any defunct processes belonging to 2972454
[2026-01-09 15:09:08] 2026-01-09 20:08:09,940 | INFO     | did not find any defunct processes belonging to 2972454
[2026-01-09 15:09:08] 2026-01-09 20:08:09,940 | INFO     | ready for new job
[2026-01-09 15:09:08] 2026-01-09 20:08:09,940 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 15:09:08] 2026-01-09 20:08:09,942 | INFO     | ***************************************
[2026-01-09 15:09:08] 2026-01-09 20:08:09,943 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 15:09:08] 2026-01-09 20:08:09,943 | INFO     | ***************************************
[2026-01-09 15:09:08] 2026-01-09 20:08:09,943 | INFO     | 
[2026-01-09 15:09:08] 2026-01-09 20:08:09,947 | INFO     | architecture information:
[2026-01-09 15:09:08] 2026-01-09 20:08:09,947 | INFO     | executing command: cat /etc/os-release
[2026-01-09 15:09:08] 2026-01-09 20:08:09,962 | INFO     | cat /etc/os-release:
[2026-01-09 15:09:08] NAME="CentOS Linux"
[2026-01-09 15:09:08] VERSION="7 (Core)"
[2026-01-09 15:09:08] ID="centos"
[2026-01-09 15:09:08] ID_LIKE="rhel fedora"
[2026-01-09 15:09:08] VERSION_ID="7"
[2026-01-09 15:09:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 15:09:08] ANSI_COLOR="0;31"
[2026-01-09 15:09:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 15:09:08] HOME_URL="https://www.centos.org/"
[2026-01-09 15:09:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 15:09:08] 
[2026-01-09 15:09:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 15:09:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 15:09:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 15:09:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 15:09:08] 
[2026-01-09 15:09:08] 2026-01-09 20:08:09,962 | INFO     | ***************************************
[2026-01-09 15:09:08] 2026-01-09 20:08:10,466 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-01-09 15:09:08] 2026-01-09 20:08:10,542 | INFO     | sufficient remaining disk space (126935367680 B)
[2026-01-09 15:09:08] 2026-01-09 20:08:10,543 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 15:09:08] 2026-01-09 20:08:10,543 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 15:09:08] 2026-01-09 20:08:10,543 | INFO     | update_server=False
[2026-01-09 15:09:08] 2026-01-09 20:08:10,543 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 15:09:08] 2026-01-09 20:08:10,883 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 15:09:08] 2026-01-09 20:08:10,991 | INFO     | all data control threads have been joined
[2026-01-09 15:09:08] 2026-01-09 20:08:11,285 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 15:09:08] 2026-01-09 20:08:11,285 | INFO     | aborting loop
[2026-01-09 15:09:08] 2026-01-09 20:08:11,535 | INFO     | all payload control threads have been joined
[2026-01-09 15:09:08] 2026-01-09 20:08:11,549 | INFO     | [job] retrieve thread has finished
[2026-01-09 15:09:08] 2026-01-09 20:08:11,551 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 15:09:08] 2026-01-09 20:08:11,560 | INFO     | [data] copytool_in thread has finished
[2026-01-09 15:09:08] 2026-01-09 20:08:11,661 | INFO     | [payload] failed_post thread has finished
[2026-01-09 15:09:08] 2026-01-09 20:08:11,927 | INFO     | all job control threads have been joined
[2026-01-09 15:09:08] 2026-01-09 20:08:11,997 | INFO     | [data] control thread has finished
[2026-01-09 15:09:08] 2026-01-09 20:08:12,291 | INFO     | [job] job monitor thread has finished
[2026-01-09 15:09:08] 2026-01-09 20:08:12,316 | INFO     | [job] validate thread has finished
[2026-01-09 15:09:08] 2026-01-09 20:08:12,525 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 15:09:08] 2026-01-09 20:08:12,548 | INFO     | [payload] control thread has finished
[2026-01-09 15:09:08] 2026-01-09 20:08:12,548 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 15:09:08] 2026-01-09 20:08:12,557 | INFO     | [job] queue monitor thread has finished
[2026-01-09 15:09:08] 2026-01-09 20:08:12,596 | INFO     | [payload] validate_post thread has finished
[2026-01-09 15:09:08] 2026-01-09 20:08:12,683 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 15:09:08] 2026-01-09 20:08:12,760 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 15:09:08] 2026-01-09 20:08:12,889 | INFO     | [data] copytool_out thread has finished
[2026-01-09 15:09:08] 2026-01-09 20:08:12,934 | INFO     | [job] control thread has finished
[2026-01-09 15:09:08] 2026-01-09 20:08:13,531 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 15:09:08] 2026-01-09 20:08:17,566 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 15:09:08] 2026-01-09 20:08:41,977 | INFO     | PID=2947193 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 15:09:08] 2026-01-09 20:08:41,977 | INFO     | .. there are 26 such processes running
[2026-01-09 15:09:08] 2026-01-09 20:08:41,977 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 15:09:08] 2026-01-09 20:08:41,978 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 15:09:08] 2026-01-09 20:08:41,978 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 15:09:08] 2026-01-09 20:09:01,629 | INFO     | [monitor] cgroup control has ended
[2026-01-09 15:09:08] 2026-01-09 20:09:02,171 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140289688618816)>', '<ExcThread(monitor, started 140289134032640)>']
[2026-01-09 15:09:08] 2026-01-09 20:09:03,105 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 15:09:08] 2026-01-09 20:09:03,105 | INFO     | [monitor] control thread has ended
[2026-01-09 15:09:08] 2026-01-09 20:09:07,198 | INFO     | all workflow threads have been joined
[2026-01-09 15:09:08] 2026-01-09 20:09:07,198 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 15:09:08] 2026-01-09 20:09:07,198 | INFO     | traces error code: 0
[2026-01-09 15:09:08] 2026-01-09 20:09:07,198 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 15:09:08] 2026-01-09 20:09:07,774 [wrapper] ==== pilot stdout END ====
[2026-01-09 15:09:08] 2026-01-09 20:09:07,785 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 15:09:08] 2026-01-09 20:09:07,788 [wrapper] pilotpid: 2947193
[2026-01-09 15:09:08] 2026-01-09 20:09:07,791 [wrapper] Pilot exit status: 0
[2026-01-09 15:09:08] 2026-01-09 20:09:07,854 [wrapper] pandaids: 6963167169
[2026-01-09 15:09:08] 2026-01-09 20:09:08,347 [wrapper] cleanup supervisor_pilot  859587 2947194
[2026-01-09 15:09:08] 2026-01-09 20:09:08,363 [wrapper] Test setup, not cleaning
[2026-01-09 15:09:08] 2026-01-09 20:09:08,368 [wrapper] apfmon messages muted
[2026-01-09 15:09:08] 2026-01-09 20:09:08,375 [wrapper] ==== wrapper stdout END ====
[2026-01-09 15:09:08] 2026-01-09 20:09:08,379 [wrapper] ==== wrapper stderr END ====
[2026-01-09 15:09:08]  *** Error codes and diagnostics ***
[2026-01-09 15:09:08]     "exeErrorCode": 0,
[2026-01-09 15:09:08]     "exeErrorDiag": "",
[2026-01-09 15:09:08]     "pilotErrorCode": 0,
[2026-01-09 15:09:08]     "pilotErrorDiag": "",
[2026-01-09 15:09:08]  *** Listing of results directory ***
[2026-01-09 15:09:08] total 449728
[2026-01-09 15:09:08] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 19:57 pilot3.tar.gz
[2026-01-09 15:09:08] -rwx------. 1 boincer umatlas     36322 Jan  8 19:57 runpilot2-wrapper.sh
[2026-01-09 15:09:08] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 19:57 queuedata.json
[2026-01-09 15:09:08] -rw-r--r--. 1 boincer umatlas       100 Jan  9 09:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 15:09:08] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 09:48 run_atlas
[2026-01-09 15:09:08] -rw-r--r--. 1 boincer umatlas       105 Jan  9 09:48 job.xml
[2026-01-09 15:09:08] -rw-r--r--. 2 boincer umatlas 225275399 Jan  9 09:48 EVNT.47898824._001377.pool.root.1
[2026-01-09 15:09:08] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 09:48 start_atlas.sh
[2026-01-09 15:09:08] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 09:48 shared
[2026-01-09 15:09:08] -rw-r--r--. 2 boincer umatlas    592395 Jan  9 09:48 input.tar.gz
[2026-01-09 15:09:08] -rw-r--r--. 1 boincer umatlas         0 Jan  9 09:48 boinc_lockfile
[2026-01-09 15:09:08] -rw-r--r--. 1 boincer umatlas      2519 Jan  9 09:48 pandaJob.out
[2026-01-09 15:09:08] -rw-------. 1 boincer umatlas        57 Jan  9 09:49 setup.sh.local
[2026-01-09 15:09:08] -rw-------. 1 boincer umatlas    989377 Jan  9 09:49 agis_schedconf.cvmfs.json
[2026-01-09 15:09:08] drwx------. 5 boincer umatlas      4096 Jan  9 09:49 pilot3
[2026-01-09 15:09:08] -rw-r--r--. 1 boincer umatlas      6957 Jan  9 15:01 init_data.xml
[2026-01-09 15:09:08] -rw-------. 1 boincer umatlas 225428764 Jan  9 15:03 HITS.47898826._035544.pool.root.1
[2026-01-09 15:09:08] -rw-r--r--. 1 boincer umatlas       531 Jan  9 15:04 boinc_task_state.xml
[2026-01-09 15:09:08] -rw-------. 1 boincer umatlas      1056 Jan  9 15:07 memory_monitor_summary.json
[2026-01-09 15:09:08] -rw-------. 1 boincer umatlas   1516240 Jan  9 15:07 agis_ddmendpoints.agis.ALL.json
[2026-01-09 15:09:08] -rw-------. 1 boincer umatlas    546830 Jan  9 15:07 log.47898826._035544.job.log.tgz.1
[2026-01-09 15:09:08] -rw-------. 1 boincer umatlas        95 Jan  9 15:07 pilot_heartbeat.json
[2026-01-09 15:09:08] -rw-------. 1 boincer umatlas      7822 Jan  9 15:08 heartbeat.json
[2026-01-09 15:09:08] -rw-r--r--. 1 boincer umatlas        28 Jan  9 15:08 wrapper_checkpoint.txt
[2026-01-09 15:09:08] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 15:08 boinc_mmap_file
[2026-01-09 15:09:08] -rw-------. 1 boincer umatlas      4825 Jan  9 15:09 pilotlog.txt
[2026-01-09 15:09:08] -rw-------. 1 boincer umatlas   2403807 Jan  9 15:09 log.47898826._035544.job.log.1
[2026-01-09 15:09:08] -rw-------. 1 boincer umatlas       357 Jan  9 15:09 output.list
[2026-01-09 15:09:08] -rw-r--r--. 1 boincer umatlas       620 Jan  9 15:09 runtime_log
[2026-01-09 15:09:08] -rw-------. 1 boincer umatlas   2969600 Jan  9 15:09 result.tar.gz
[2026-01-09 15:09:08] -rw-------. 1 boincer umatlas       659 Jan  9 15:09 uBwLDmdzFy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmxZgKDmgb5u3n.diag
[2026-01-09 15:09:08] -rw-r--r--. 1 boincer umatlas      9343 Jan  9 15:09 runtime_log.err
[2026-01-09 15:09:08] -rw-r--r--. 1 boincer umatlas     21208 Jan  9 15:09 stderr.txt
[2026-01-09 15:09:08] HITS file was successfully produced:
[2026-01-09 15:09:08] -rw-------. 1 boincer umatlas 225428764 Jan  9 15:03 shared/HITS.pool.root.1
[2026-01-09 15:09:08]  *** Contents of shared directory: ***
[2026-01-09 15:09:08] total 443648
[2026-01-09 15:09:08] -rw-r--r--. 2 boincer umatlas 225275399 Jan  9 09:48 ATLAS.root_0
[2026-01-09 15:09:08] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 09:48 start_atlas.sh
[2026-01-09 15:09:08] -rw-r--r--. 2 boincer umatlas    592395 Jan  9 09:48 input.tar.gz
[2026-01-09 15:09:08] -rw-------. 1 boincer umatlas 225428764 Jan  9 15:03 HITS.pool.root.1
[2026-01-09 15:09:08] -rw-------. 1 boincer umatlas   2969600 Jan  9 15:09 result.tar.gz
15:09:10 (2934803): run_atlas exited; CPU time 44119.712052
15:09:10 (2934803): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN