Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:34:20 (19660): wrapper (7.7.26015): starting
09:34:20 (19660): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 09:34:20] Arguments: --nthreads 8
[2026-01-09 09:34:20] Threads: 8
[2026-01-09 09:34:20] Checking for CVMFS
[2026-01-09 09:34:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 09:34:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 09:34:21] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 09:34:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 09:34:21] 2.11.2.0 2776 106564 84300 154946 3 57 17500829 20275200 1 130560 0 22135687 99.794 6632490 31576 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 09:34:21] CVMFS is ok
[2026-01-09 09:34:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 09:34:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 09:34:21] Further information can be found at the LHC@home message board.
[2026-01-09 09:34:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 09:34:21] Checking for apptainer binary...
[2026-01-09 09:34:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 09:34:21] Running /usr/bin/apptainer --version
[2026-01-09 09:34:21] apptainer version 1.3.2-1.el7
[2026-01-09 09:34:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 09:34:22] c-115-7.aglt2.org
[2026-01-09 09:34:22] apptainer works
[2026-01-09 09:34:22] Set ATHENA_PROC_NUMBER=8
[2026-01-09 09:34:22] Set ATHENA_CORE_NUMBER=8
[2026-01-09 09:34:22] Starting ATLAS job with PandaID=6963167518
[2026-01-09 09:34:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 12:10:00]  *** The last 200 lines of the pilot log: ***
[2026-01-09 12:10:00] 2026-01-09 17:09:17,849 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1745.75
[2026-01-09 12:10:00] 2026-01-09 17:09:17,851 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963167518/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 12:10:00] 2026-01-09 17:09:17,852 | INFO     | extracted standard info from prmon json
[2026-01-09 12:10:00] 2026-01-09 17:09:17,852 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 12:10:00] 2026-01-09 17:09:17,852 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 12:10:00] 2026-01-09 17:09:17,853 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 12:10:00] 2026-01-09 17:09:17,853 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 12:10:00] 2026-01-09 17:09:17,857 | INFO     | fitting pss+swap vs Time
[2026-01-09 12:10:00] 2026-01-09 17:09:17,857 | INFO     | sum of square deviations: 1088905998.0
[2026-01-09 12:10:00] 2026-01-09 17:09:17,858 | INFO     | sum of deviations: -9213561146.0
[2026-01-09 12:10:00] 2026-01-09 17:09:17,858 | INFO     | mean x: 1767973915.5
[2026-01-09 12:10:00] 2026-01-09 17:09:17,858 | INFO     | mean y: 2521729.8421052634
[2026-01-09 12:10:00] 2026-01-09 17:09:17,858 | INFO     | intersect: 14961880760.751116
[2026-01-09 12:10:00] 2026-01-09 17:09:17,859 | INFO     | chi2: 2.2823286278439987
[2026-01-09 12:10:00] 2026-01-09 17:09:17,859 | INFO     | sum of square deviations: 984941258.0
[2026-01-09 12:10:00] 2026-01-09 17:09:17,860 | INFO     | sum of deviations: 1195548028.0000024
[2026-01-09 12:10:00] 2026-01-09 17:09:17,860 | INFO     | mean x: 1767973763.0
[2026-01-09 12:10:00] 2026-01-09 17:09:17,860 | INFO     | mean y: 2536601.4217687077
[2026-01-09 12:10:00] 2026-01-09 17:09:17,860 | INFO     | intersect: -2143477212.846121
[2026-01-09 12:10:00] 2026-01-09 17:09:17,860 | INFO     | chi2: 1.5116646421952697
[2026-01-09 12:10:00] 2026-01-09 17:09:17,860 | INFO     | current chi2=1.5116646421952697 (change=33.766565263510564 %)
[2026-01-09 12:10:00] 2026-01-09 17:09:17,861 | INFO     | sum of square deviations: 887813855.5
[2026-01-09 12:10:00] 2026-01-09 17:09:17,861 | INFO     | sum of deviations: 1253794457.4999986
[2026-01-09 12:10:00] 2026-01-09 17:09:17,861 | INFO     | mean x: 1767973610.5
[2026-01-09 12:10:00] 2026-01-09 17:09:17,862 | INFO     | mean y: 2536692.9507042253
[2026-01-09 12:10:00] 2026-01-09 17:09:17,862 | INFO     | intersect: -2494242896.73341
[2026-01-09 12:10:00] 2026-01-09 17:09:17,862 | INFO     | chi2: 1.5122444163285584
[2026-01-09 12:10:00] 2026-01-09 17:09:17,862 | INFO     | current chi2=1.5122444163285584 (change=-0.03835335676349029 %)
[2026-01-09 12:10:00] 2026-01-09 17:09:17,862 | INFO     | right removable region: 141
[2026-01-09 12:10:00] 2026-01-09 17:09:17,862 | INFO     | sum of square deviations: 984941258.0
[2026-01-09 12:10:00] 2026-01-09 17:09:17,863 | INFO     | sum of deviations: -30328506674.0
[2026-01-09 12:10:00] 2026-01-09 17:09:17,863 | INFO     | mean x: 1767974068.0
[2026-01-09 12:10:00] 2026-01-09 17:09:17,863 | INFO     | mean y: 2552198.768707483
[2026-01-09 12:10:00] 2026-01-09 17:09:17,863 | INFO     | intersect: 54442360548.02656
[2026-01-09 12:10:00] 2026-01-09 17:09:17,864 | INFO     | chi2: 0.9464680818292521
[2026-01-09 12:10:00] 2026-01-09 17:09:17,864 | INFO     | current chi2=0.9464680818292521 (change=58.53059588866775 %)
[2026-01-09 12:10:00] 2026-01-09 17:09:17,864 | INFO     | sum of square deviations: 887813855.5
[2026-01-09 12:10:00] 2026-01-09 17:09:17,865 | INFO     | sum of deviations: -29060196625.999992
[2026-01-09 12:10:00] 2026-01-09 17:09:17,865 | INFO     | mean x: 1767974220.5
[2026-01-09 12:10:00] 2026-01-09 17:09:17,865 | INFO     | mean y: 2550116.8309859154
[2026-01-09 12:10:00] 2026-01-09 17:09:17,865 | INFO     | intersect: 57872426959.98312
[2026-01-09 12:10:00] 2026-01-09 17:09:17,865 | INFO     | chi2: 0.9299694582961637
[2026-01-09 12:10:00] 2026-01-09 17:09:17,866 | INFO     | current chi2=0.9299694582961637 (change=1.7431780162307509 %)
[2026-01-09 12:10:00] 2026-01-09 17:09:17,866 | INFO     | left removable region: 20
[2026-01-09 12:10:00] 2026-01-09 17:09:17,866 | INFO     | sum of square deviations: 549294020.0
[2026-01-09 12:10:00] 2026-01-09 17:09:17,866 | INFO     | sum of deviations: -9566033847.0
[2026-01-09 12:10:00] 2026-01-09 17:09:17,866 | INFO     | mean x: 1767974190.0
[2026-01-09 12:10:00] 2026-01-09 17:09:17,867 | INFO     | mean y: 2551389.9256198346
[2026-01-09 12:10:00] 2026-01-09 17:09:17,867 | INFO     | intersect: 30792074534.857018
[2026-01-09 12:10:00] 2026-01-09 17:09:17,867 | INFO     | chi2: 0.09838383478449098
[2026-01-09 12:10:00] 2026-01-09 17:09:17,867 | INFO     | current memory leak: -17.42 B/s (using 121 data points, chi2=0.10)
[2026-01-09 12:10:00] 2026-01-09 17:09:17,867 | INFO     | could have reported an average CPU frequency of 2137 MHz (9 samples)
[2026-01-09 12:10:00] 2026-01-09 17:09:17,868 | INFO     | ..............................
[2026-01-09 12:10:00] 2026-01-09 17:09:17,868 | INFO     | . Timing measurements:
[2026-01-09 12:10:00] 2026-01-09 17:09:17,868 | INFO     | . get job = 0 s
[2026-01-09 12:10:00] 2026-01-09 17:09:17,868 | INFO     | . initial setup = 2 s
[2026-01-09 12:10:00] 2026-01-09 17:09:17,868 | INFO     | . payload setup = 8 s
[2026-01-09 12:10:00] 2026-01-09 17:09:17,868 | INFO     | . stage-in = 0 s
[2026-01-09 12:10:00] 2026-01-09 17:09:17,868 | INFO     | . payload execution = 9238 s
[2026-01-09 12:10:00] 2026-01-09 17:09:17,868 | INFO     | . stage-out = 1 s
[2026-01-09 12:10:00] 2026-01-09 17:09:17,869 | INFO     | . log creation = 0 s
[2026-01-09 12:10:00] 2026-01-09 17:09:17,869 | INFO     | ..............................
[2026-01-09 12:10:00] 2026-01-09 17:09:17,953 | INFO     | 
[2026-01-09 12:10:00] 2026-01-09 17:09:17,953 | INFO     | job summary report
[2026-01-09 12:10:00] 2026-01-09 17:09:17,954 | INFO     | --------------------------------------------------
[2026-01-09 12:10:00] 2026-01-09 17:09:17,954 | INFO     | PanDA job id: 6963167518
[2026-01-09 12:10:00] 2026-01-09 17:09:17,954 | INFO     | task id: 47898826
[2026-01-09 12:10:00] 2026-01-09 17:09:17,954 | INFO     | errors: (none)
[2026-01-09 12:10:00] 2026-01-09 17:09:17,954 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 12:10:00] 2026-01-09 17:09:17,954 | INFO     | pilot state: finished 
[2026-01-09 12:10:00] 2026-01-09 17:09:17,955 | INFO     | transexitcode: 0
[2026-01-09 12:10:00] 2026-01-09 17:09:17,955 | INFO     | exeerrorcode: 0
[2026-01-09 12:10:00] 2026-01-09 17:09:17,955 | INFO     | exeerrordiag: 
[2026-01-09 12:10:00] 2026-01-09 17:09:17,955 | INFO     | exitcode: 0
[2026-01-09 12:10:00] 2026-01-09 17:09:17,955 | INFO     | exitmsg: OK
[2026-01-09 12:10:00] 2026-01-09 17:09:17,956 | INFO     | cpuconsumptiontime: 69417 s
[2026-01-09 12:10:00] 2026-01-09 17:09:17,956 | INFO     | nevents: 400
[2026-01-09 12:10:00] 2026-01-09 17:09:17,956 | INFO     | neventsw: 0
[2026-01-09 12:10:00] 2026-01-09 17:09:17,956 | INFO     | pid: 30873
[2026-01-09 12:10:00] 2026-01-09 17:09:17,956 | INFO     | pgrp: 30873
[2026-01-09 12:10:00] 2026-01-09 17:09:17,956 | INFO     | corecount: 8
[2026-01-09 12:10:00] 2026-01-09 17:09:17,957 | INFO     | event service: False
[2026-01-09 12:10:00] 2026-01-09 17:09:17,957 | INFO     | sizes: {0: 2283800, 1: 2283999, 6: 2284261, 11: 2284289, 9249: 2312598, 9250: 2312597, 9251: 2321779, 9254: 2321835, 9261: 2322093}
[2026-01-09 12:10:00] 2026-01-09 17:09:17,957 | INFO     | --------------------------------------------------
[2026-01-09 12:10:00] 2026-01-09 17:09:17,957 | INFO     | 
[2026-01-09 12:10:00] 2026-01-09 17:09:17,957 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 12:10:00] 2026-01-09 17:09:17,988 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 12:10:00] 2026-01-09 17:09:17,989 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 12:10:00] 2026-01-09 17:09:17,989 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 12:10:00] 2026-01-09 17:09:17,989 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 12:10:00] 2026-01-09 17:09:17,989 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 12:10:00] 2026-01-09 17:09:17,989 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 12:10:00] 2026-01-09 17:09:17,990 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 12:10:00] 2026-01-09 17:09:17,990 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 12:10:00] 2026-01-09 17:09:17,990 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 12:10:00] 2026-01-09 17:09:17,990 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 12:10:00] 2026-01-09 17:09:17,990 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 12:10:00] 2026-01-09 17:09:17,991 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 12:10:00] 2026-01-09 17:09:17,991 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 12:10:00] 2026-01-09 17:09:17,991 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 12:10:00] 2026-01-09 17:09:17,991 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 12:10:00] 2026-01-09 17:09:17,991 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 12:10:00] 2026-01-09 17:09:17,991 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 12:10:00] 2026-01-09 17:09:17,992 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 12:10:00] 2026-01-09 17:09:17,992 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 12:10:00] 2026-01-09 17:09:17,992 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 12:10:00] 2026-01-09 17:09:17,992 | INFO     | job 6963167518 has completed (purged errors)
[2026-01-09 12:10:00] 2026-01-09 17:09:17,992 | INFO     | overall cleanup function is called
[2026-01-09 12:10:00] 2026-01-09 17:09:18,294 | INFO     | PID=24049 has CPU usage=8.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 12:10:00] 2026-01-09 17:09:19,001 | INFO     | --- collectZombieJob: --- 10, [30873]
[2026-01-09 12:10:00] 2026-01-09 17:09:19,001 | INFO     | zombie collector waiting for pid 30873
[2026-01-09 12:10:00] 2026-01-09 17:09:19,001 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 12:10:00] 2026-01-09 17:09:19,002 | INFO     | collected zombie processes
[2026-01-09 12:10:00] 2026-01-09 17:09:19,002 | INFO     | will attempt to kill all subprocesses of pid=30873
[2026-01-09 12:10:00] 2026-01-09 17:09:19,085 | INFO     | process IDs to be killed: [30873] (in reverse order)
[2026-01-09 12:10:00] 2026-01-09 17:09:19,147 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 12:10:00] 2026-01-09 17:09:19,148 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 12:10:00] 2026-01-09 17:09:19,151 | INFO     | did not find any defunct processes belonging to 30873
[2026-01-09 12:10:00] 2026-01-09 17:09:19,154 | INFO     | did not find any defunct processes belonging to 30873
[2026-01-09 12:10:00] 2026-01-09 17:09:19,154 | INFO     | ready for new job
[2026-01-09 12:10:00] 2026-01-09 17:09:19,154 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 12:10:00] 2026-01-09 17:09:19,156 | INFO     | ***************************************
[2026-01-09 12:10:00] 2026-01-09 17:09:19,156 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 12:10:00] 2026-01-09 17:09:19,156 | INFO     | ***************************************
[2026-01-09 12:10:00] 2026-01-09 17:09:19,156 | INFO     | 
[2026-01-09 12:10:00] 2026-01-09 17:09:19,157 | INFO     | architecture information:
[2026-01-09 12:10:00] 2026-01-09 17:09:19,157 | INFO     | executing command: cat /etc/os-release
[2026-01-09 12:10:00] 2026-01-09 17:09:19,175 | INFO     | cat /etc/os-release:
[2026-01-09 12:10:00] NAME="CentOS Linux"
[2026-01-09 12:10:00] VERSION="7 (Core)"
[2026-01-09 12:10:00] ID="centos"
[2026-01-09 12:10:00] ID_LIKE="rhel fedora"
[2026-01-09 12:10:00] VERSION_ID="7"
[2026-01-09 12:10:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 12:10:00] ANSI_COLOR="0;31"
[2026-01-09 12:10:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 12:10:00] HOME_URL="https://www.centos.org/"
[2026-01-09 12:10:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 12:10:00] 
[2026-01-09 12:10:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 12:10:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 12:10:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 12:10:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 12:10:00] 
[2026-01-09 12:10:00] 2026-01-09 17:09:19,175 | INFO     | ***************************************
[2026-01-09 12:10:00] 2026-01-09 17:09:19,678 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 12:10:00] 2026-01-09 17:09:19,698 | INFO     | sufficient remaining disk space (18532532224 B)
[2026-01-09 12:10:00] 2026-01-09 17:09:19,699 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 12:10:00] 2026-01-09 17:09:19,699 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 12:10:00] 2026-01-09 17:09:19,699 | INFO     | update_server=False
[2026-01-09 12:10:00] 2026-01-09 17:09:19,699 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 12:10:00] 2026-01-09 17:09:19,700 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:10:00] 2026-01-09 17:09:19,715 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 12:10:00] 2026-01-09 17:09:19,716 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 12:10:00] 2026-01-09 17:09:19,716 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:10:00] 2026-01-09 17:09:19,716 | INFO     | will abort loop
[2026-01-09 12:10:00] 2026-01-09 17:09:19,967 | INFO     | all job control threads have been joined
[2026-01-09 12:10:00] 2026-01-09 17:09:20,577 | INFO     | all payload control threads have been joined
[2026-01-09 12:10:00] 2026-01-09 17:09:20,705 | INFO     | [job] retrieve thread has finished
[2026-01-09 12:10:00] 2026-01-09 17:09:20,706 | INFO     | [job] queue monitor thread has finished
[2026-01-09 12:10:00] 2026-01-09 17:09:20,722 | INFO     | [job] job monitor thread has finished
[2026-01-09 12:10:00] 2026-01-09 17:09:20,768 | INFO     | all data control threads have been joined
[2026-01-09 12:10:00] 2026-01-09 17:09:20,852 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 12:10:00] 2026-01-09 17:09:20,973 | INFO     | [job] control thread has finished
[2026-01-09 12:10:00] 2026-01-09 17:09:21,017 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 12:10:00] 2026-01-09 17:09:21,245 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 12:10:00] 2026-01-09 17:09:21,293 | INFO     | [job] validate thread has finished
[2026-01-09 12:10:00] 2026-01-09 17:09:21,502 | INFO     | [data] copytool_in thread has finished
[2026-01-09 12:10:00] 2026-01-09 17:09:21,561 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 12:10:00] 2026-01-09 17:09:21,582 | INFO     | [payload] control thread has finished
[2026-01-09 12:10:00] 2026-01-09 17:09:21,774 | INFO     | [data] control thread has finished
[2026-01-09 12:10:00] 2026-01-09 17:09:21,779 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 12:10:00] 2026-01-09 17:09:21,832 | INFO     | [payload] validate_post thread has finished
[2026-01-09 12:10:00] 2026-01-09 17:09:22,093 | INFO     | [payload] failed_post thread has finished
[2026-01-09 12:10:00] 2026-01-09 17:09:23,022 | INFO     | [data] copytool_out thread has finished
[2026-01-09 12:10:00] 2026-01-09 17:09:25,251 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 12:10:00] 2026-01-09 17:09:30,024 | INFO     | job.realtimelogging is not enabled
[2026-01-09 12:10:00] 2026-01-09 17:09:31,029 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 12:10:00] 2026-01-09 17:09:50,504 | INFO     | PID=24049 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 12:10:00] 2026-01-09 17:09:50,505 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 12:10:00] 2026-01-09 17:09:50,505 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 12:10:00] 2026-01-09 17:09:50,505 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 12:10:00] 2026-01-09 17:09:54,222 | INFO     | [monitor] cgroup control has ended
[2026-01-09 12:10:00] 2026-01-09 17:09:55,321 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139726421636928)>', '<ExcThread(monitor, started 139726107416320)>']
[2026-01-09 12:10:00] 2026-01-09 17:09:55,531 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 12:10:00] 2026-01-09 17:09:55,531 | INFO     | [monitor] control thread has ended
[2026-01-09 12:10:00] 2026-01-09 17:10:00,325 | INFO     | all workflow threads have been joined
[2026-01-09 12:10:00] 2026-01-09 17:10:00,329 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 12:10:00] 2026-01-09 17:10:00,330 | INFO     | traces error code: 0
[2026-01-09 12:10:00] 2026-01-09 17:10:00,330 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 12:10:00] 2026-01-09 17:10:00,444 [wrapper] ==== pilot stdout END ====
[2026-01-09 12:10:00] 2026-01-09 17:10:00,449 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 12:10:00] 2026-01-09 17:10:00,453 [wrapper] pilotpid: 24049
[2026-01-09 12:10:00] 2026-01-09 17:10:00,457 [wrapper] Pilot exit status: 0
[2026-01-09 12:10:00] 2026-01-09 17:10:00,475 [wrapper] pandaids: 6963167518
[2026-01-09 12:10:00] 2026-01-09 17:10:00,523 [wrapper] cleanup supervisor_pilot  1909 24050
[2026-01-09 12:10:00] 2026-01-09 17:10:00,529 [wrapper] Test setup, not cleaning
[2026-01-09 12:10:00] 2026-01-09 17:10:00,534 [wrapper] apfmon messages muted
[2026-01-09 12:10:00] 2026-01-09 17:10:00,538 [wrapper] ==== wrapper stdout END ====
[2026-01-09 12:10:00] 2026-01-09 17:10:00,543 [wrapper] ==== wrapper stderr END ====
[2026-01-09 12:10:00]  *** Error codes and diagnostics ***
[2026-01-09 12:10:00]     "exeErrorCode": 0,
[2026-01-09 12:10:00]     "exeErrorDiag": "",
[2026-01-09 12:10:00]     "pilotErrorCode": 0,
[2026-01-09 12:10:00]     "pilotErrorDiag": "",
[2026-01-09 12:10:00]  *** Listing of results directory ***
[2026-01-09 12:10:00] total 440936
[2026-01-09 12:10:00] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 19:57 pilot3.tar.gz
[2026-01-09 12:10:00] -rwx------ 1 boincer umatlas     36322 Jan  8 19:57 runpilot2-wrapper.sh
[2026-01-09 12:10:00] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 19:57 queuedata.json
[2026-01-09 12:10:00] -rw-r--r-- 1 boincer umatlas       100 Jan  9 09:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 12:10:00] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 09:34 run_atlas
[2026-01-09 12:10:00] -rw-r--r-- 1 boincer umatlas       105 Jan  9 09:34 job.xml
[2026-01-09 12:10:00] -rw-r--r-- 2 boincer umatlas 225409879 Jan  9 09:34 EVNT.47898824._001327.pool.root.1
[2026-01-09 12:10:00] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 09:34 start_atlas.sh
[2026-01-09 12:10:00] drwxrwx--x 2 boincer umatlas      4096 Jan  9 09:34 shared
[2026-01-09 12:10:00] -rw-r--r-- 2 boincer umatlas    592398 Jan  9 09:34 input.tar.gz
[2026-01-09 12:10:00] -rw-r--r-- 1 boincer umatlas         0 Jan  9 09:34 boinc_lockfile
[2026-01-09 12:10:00] -rw-r--r-- 1 boincer umatlas      2520 Jan  9 09:34 pandaJob.out
[2026-01-09 12:10:00] -rw------- 1 boincer umatlas        57 Jan  9 09:34 setup.sh.local
[2026-01-09 12:10:00] -rw------- 1 boincer umatlas    989377 Jan  9 09:34 agis_schedconf.cvmfs.json
[2026-01-09 12:10:00] -rw------- 1 boincer umatlas   1516240 Jan  9 09:34 agis_ddmendpoints.agis.ALL.json
[2026-01-09 12:10:00] drwx------ 5 boincer umatlas      4096 Jan  9 09:34 pilot3
[2026-01-09 12:10:00] -rw------- 1 boincer umatlas 218815451 Jan  9 12:08 HITS.47898826._035759.pool.root.1
[2026-01-09 12:10:00] -rw-r--r-- 1 boincer umatlas       530 Jan  9 12:08 boinc_task_state.xml
[2026-01-09 12:10:00] -rw------- 1 boincer umatlas      1062 Jan  9 12:09 memory_monitor_summary.json
[2026-01-09 12:10:00] -rw------- 1 boincer umatlas    390253 Jan  9 12:09 log.47898826._035759.job.log.tgz.1
[2026-01-09 12:10:00] -rw------- 1 boincer umatlas      7845 Jan  9 12:09 heartbeat.json
[2026-01-09 12:10:00] -rw-r--r-- 1 boincer umatlas      5908 Jan  9 12:09 init_data.xml
[2026-01-09 12:10:00] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 12:09 boinc_mmap_file
[2026-01-09 12:10:00] -rw-r--r-- 1 boincer umatlas        27 Jan  9 12:09 wrapper_checkpoint.txt
[2026-01-09 12:10:00] -rw------- 1 boincer umatlas        95 Jan  9 12:09 pilot_heartbeat.json
[2026-01-09 12:10:00] -rw------- 1 boincer umatlas      5004 Jan  9 12:10 pilotlog.txt
[2026-01-09 12:10:00] -rw------- 1 boincer umatlas   1298269 Jan  9 12:10 log.47898826._035759.job.log.1
[2026-01-09 12:10:00] -rw------- 1 boincer umatlas       357 Jan  9 12:10 output.list
[2026-01-09 12:10:00] -rw-r--r-- 1 boincer umatlas       620 Jan  9 12:10 runtime_log
[2026-01-09 12:10:00] -rw------- 1 boincer umatlas   1710080 Jan  9 12:10 result.tar.gz
[2026-01-09 12:10:00] -rw-r--r-- 1 boincer umatlas      9337 Jan  9 12:10 runtime_log.err
[2026-01-09 12:10:00] -rw------- 1 boincer umatlas       659 Jan  9 12:10 B9iKDmpzFy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm0agKDmQTP4Pm.diag
[2026-01-09 12:10:00] -rw-r--r-- 1 boincer umatlas     21177 Jan  9 12:10 stderr.txt
[2026-01-09 12:10:00] HITS file was successfully produced:
[2026-01-09 12:10:00] -rw------- 1 boincer umatlas 218815451 Jan  9 12:08 shared/HITS.pool.root.1
[2026-01-09 12:10:00]  *** Contents of shared directory: ***
[2026-01-09 12:10:00] total 436088
[2026-01-09 12:10:00] -rw-r--r-- 2 boincer umatlas 225409879 Jan  9 09:34 ATLAS.root_0
[2026-01-09 12:10:00] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 09:34 start_atlas.sh
[2026-01-09 12:10:00] -rw-r--r-- 2 boincer umatlas    592398 Jan  9 09:34 input.tar.gz
[2026-01-09 12:10:00] -rw------- 1 boincer umatlas 218815451 Jan  9 12:08 HITS.pool.root.1
[2026-01-09 12:10:00] -rw------- 1 boincer umatlas   1710080 Jan  9 12:10 result.tar.gz
12:10:02 (19660): run_atlas exited; CPU time 69374.355152
12:10:02 (19660): called boinc_finish(0)

</stderr_txt>
]]>

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