Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:16:51 (951917): wrapper (7.7.26015): starting
11:16:51 (951917): wrapper: running run_atlas (--nthreads 9)
[2026-01-09 11:16:51] Arguments: --nthreads 9
[2026-01-09 11:16:51] Threads: 9
[2026-01-09 11:16:51] Checking for CVMFS
[2026-01-09 11:16:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 11:16:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 11:16:52] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 11:16:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 11:16:53] 2.13.3.0 11820 23104 147048 154950 3 17 27835879 40960001 22888 16776704 0 35417978 99.772 24841470 49045 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 11:16:53] CVMFS is ok
[2026-01-09 11:16:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 11:16:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 11:16:53] Further information can be found at the LHC@home message board.
[2026-01-09 11:16:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 11:16:53] Checking for apptainer binary...
[2026-01-09 11:16:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 11:16:53] Running /usr/bin/apptainer --version
[2026-01-09 11:16:53] apptainer version 1.4.5-2.el9
[2026-01-09 11:16:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 11:16:53] c-212-10.aglt2.org
[2026-01-09 11:16:53] apptainer works
[2026-01-09 11:16:53] Set ATHENA_PROC_NUMBER=9
[2026-01-09 11:16:53] Set ATHENA_CORE_NUMBER=9
[2026-01-09 11:16:53] Starting ATLAS job with PandaID=6963165960
[2026-01-09 11:16:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 16:05:50]  *** The last 200 lines of the pilot log: ***
[2026-01-09 16:05:50] 2026-01-09 21:05:05,324 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 16:05:50] 2026-01-09 21:05:05,334 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3268.9758854166666
[2026-01-09 16:05:50] 2026-01-09 21:05:05,355 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6963165960/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 16:05:50] 2026-01-09 21:05:05,356 | INFO     | extracted standard info from prmon json
[2026-01-09 16:05:50] 2026-01-09 21:05:05,356 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 16:05:50] 2026-01-09 21:05:05,356 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 16:05:50] 2026-01-09 21:05:05,357 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 16:05:50] 2026-01-09 21:05:05,357 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 16:05:50] 2026-01-09 21:05:05,361 | INFO     | fitting pss+swap vs Time
[2026-01-09 16:05:50] 2026-01-09 21:05:05,361 | INFO     | sum of square deviations: 6954037807.219896
[2026-01-09 16:05:50] 2026-01-09 21:05:05,363 | INFO     | sum of deviations: 6355247228.801418
[2026-01-09 16:05:50] 2026-01-09 21:05:05,363 | INFO     | mean x: 1767984076.567376
[2026-01-09 16:05:50] 2026-01-09 21:05:05,363 | INFO     | mean y: 2551386.3262411347
[2026-01-09 16:05:50] 2026-01-09 21:05:05,363 | INFO     | intersect: -1613197077.3223624
[2026-01-09 16:05:50] 2026-01-09 21:05:05,364 | INFO     | chi2: 2.7386326177982654
[2026-01-09 16:05:50] 2026-01-09 21:05:05,364 | INFO     | sum of square deviations: 6590678649.69675
[2026-01-09 16:05:50] 2026-01-09 21:05:05,365 | INFO     | sum of deviations: 26579003527.14079
[2026-01-09 16:05:50] 2026-01-09 21:05:05,366 | INFO     | mean x: 1767983924.068592
[2026-01-09 16:05:50] 2026-01-09 21:05:05,366 | INFO     | mean y: 2559751.3610108304
[2026-01-09 16:05:50] 2026-01-09 21:05:05,366 | INFO     | intersect: -7127396578.08459
[2026-01-09 16:05:50] 2026-01-09 21:05:05,366 | INFO     | chi2: 1.8672810738414145
[2026-01-09 16:05:50] 2026-01-09 21:05:05,366 | INFO     | current chi2=1.8672810738414145 (change=31.817029355962955 %)
[2026-01-09 16:05:50] 2026-01-09 21:05:05,366 | INFO     | sum of square deviations: 6240186556.808812
[2026-01-09 16:05:50] 2026-01-09 21:05:05,368 | INFO     | sum of deviations: 26169538922.367664
[2026-01-09 16:05:50] 2026-01-09 21:05:05,368 | INFO     | mean x: 1767983771.5661764
[2026-01-09 16:05:50] 2026-01-09 21:05:05,368 | INFO     | mean y: 2559573.257352941
[2026-01-09 16:05:50] 2026-01-09 21:05:05,368 | INFO     | intersect: -7411853393.872948
[2026-01-09 16:05:50] 2026-01-09 21:05:05,368 | INFO     | chi2: 1.867938986169216
[2026-01-09 16:05:50] 2026-01-09 21:05:05,368 | INFO     | current chi2=1.867938986169216 (change=-0.035233706216920124 %)
[2026-01-09 16:05:50] 2026-01-09 21:05:05,368 | INFO     | right removable region: 271
[2026-01-09 16:05:50] 2026-01-09 21:05:05,369 | INFO     | sum of square deviations: 6590667059.69675
[2026-01-09 16:05:50] 2026-01-09 21:05:05,370 | INFO     | sum of deviations: -39474898756.74368
[2026-01-09 16:05:50] 2026-01-09 21:05:05,370 | INFO     | mean x: 1767984229.068592
[2026-01-09 16:05:50] 2026-01-09 21:05:05,370 | INFO     | mean y: 2570494.144404332
[2026-01-09 16:05:50] 2026-01-09 21:05:05,370 | INFO     | intersect: 10591938431.23656
[2026-01-09 16:05:50] 2026-01-09 21:05:05,371 | INFO     | chi2: 1.3134785321070213
[2026-01-09 16:05:50] 2026-01-09 21:05:05,371 | INFO     | current chi2=1.3134785321070213 (change=52.03889256372774 %)
[2026-01-09 16:05:50] 2026-01-09 21:05:05,371 | INFO     | sum of square deviations: 6240180274.6727915
[2026-01-09 16:05:50] 2026-01-09 21:05:05,373 | INFO     | sum of deviations: -50536282394.67647
[2026-01-09 16:05:50] 2026-01-09 21:05:05,373 | INFO     | mean x: 1767984381.5698528
[2026-01-09 16:05:50] 2026-01-09 21:05:05,373 | INFO     | mean y: 2575297.088235294
[2026-01-09 16:05:50] 2026-01-09 21:05:05,373 | INFO     | intersect: 14320648500.682745
[2026-01-09 16:05:50] 2026-01-09 21:05:05,373 | INFO     | chi2: 1.2390706818660056
[2026-01-09 16:05:50] 2026-01-09 21:05:05,373 | INFO     | current chi2=1.2390706818660056 (change=5.664946051432914 %)
[2026-01-09 16:05:50] 2026-01-09 21:05:05,373 | INFO     | left removable region: 20
[2026-01-09 16:05:50] 2026-01-09 21:05:05,373 | INFO     | sum of square deviations: 4903574563.848596
[2026-01-09 16:05:50] 2026-01-09 21:05:05,375 | INFO     | sum of deviations: -32431408269.366558
[2026-01-09 16:05:50] 2026-01-09 21:05:05,375 | INFO     | mean x: 1767984351.067729
[2026-01-09 16:05:50] 2026-01-09 21:05:05,375 | INFO     | mean y: 2586332.374501992
[2026-01-09 16:05:50] 2026-01-09 21:05:05,375 | INFO     | intersect: 11695734169.067417
[2026-01-09 16:05:50] 2026-01-09 21:05:05,375 | INFO     | chi2: 0.33460913128497594
[2026-01-09 16:05:50] 2026-01-09 21:05:05,375 | INFO     | current memory leak: -6.61 B/s (using 251 data points, chi2=0.33)
[2026-01-09 16:05:50] 2026-01-09 21:05:05,376 | INFO     | could have reported an average CPU frequency of 3173 MHz (13 samples)
[2026-01-09 16:05:50] 2026-01-09 21:05:05,376 | INFO     | ..............................
[2026-01-09 16:05:50] 2026-01-09 21:05:05,376 | INFO     | . Timing measurements:
[2026-01-09 16:05:50] 2026-01-09 21:05:05,376 | INFO     | . get job = 0 s
[2026-01-09 16:05:50] 2026-01-09 21:05:05,376 | INFO     | . initial setup = 2 s
[2026-01-09 16:05:50] 2026-01-09 21:05:05,376 | INFO     | . payload setup = 25 s
[2026-01-09 16:05:50] 2026-01-09 21:05:05,376 | INFO     | . stage-in = 0 s
[2026-01-09 16:05:50] 2026-01-09 21:05:05,376 | INFO     | . payload execution = 17195 s
[2026-01-09 16:05:50] 2026-01-09 21:05:05,376 | INFO     | . stage-out = 2 s
[2026-01-09 16:05:50] 2026-01-09 21:05:05,376 | INFO     | . log creation = 0 s
[2026-01-09 16:05:50] 2026-01-09 21:05:05,376 | INFO     | ..............................
[2026-01-09 16:05:50] 2026-01-09 21:05:05,450 | INFO     | 
[2026-01-09 16:05:50] 2026-01-09 21:05:05,451 | INFO     | job summary report
[2026-01-09 16:05:50] 2026-01-09 21:05:05,451 | INFO     | --------------------------------------------------
[2026-01-09 16:05:50] 2026-01-09 21:05:05,452 | INFO     | PanDA job id: 6963165960
[2026-01-09 16:05:50] 2026-01-09 21:05:05,452 | INFO     | task id: 47898826
[2026-01-09 16:05:50] 2026-01-09 21:05:05,452 | INFO     | errors: (none)
[2026-01-09 16:05:50] 2026-01-09 21:05:05,452 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 16:05:50] 2026-01-09 21:05:05,452 | INFO     | pilot state: finished 
[2026-01-09 16:05:50] 2026-01-09 21:05:05,452 | INFO     | transexitcode: 0
[2026-01-09 16:05:50] 2026-01-09 21:05:05,452 | INFO     | exeerrorcode: 0
[2026-01-09 16:05:50] 2026-01-09 21:05:05,452 | INFO     | exeerrordiag: 
[2026-01-09 16:05:50] 2026-01-09 21:05:05,452 | INFO     | exitcode: 0
[2026-01-09 16:05:50] 2026-01-09 21:05:05,452 | INFO     | exitmsg: OK
[2026-01-09 16:05:50] 2026-01-09 21:05:05,452 | INFO     | cpuconsumptiontime: 45458 s
[2026-01-09 16:05:50] 2026-01-09 21:05:05,458 | INFO     | nevents: 400
[2026-01-09 16:05:50] 2026-01-09 21:05:05,458 | INFO     | neventsw: 0
[2026-01-09 16:05:50] 2026-01-09 21:05:05,458 | INFO     | pid: 964006
[2026-01-09 16:05:50] 2026-01-09 21:05:05,458 | INFO     | pgrp: 964006
[2026-01-09 16:05:50] 2026-01-09 21:05:05,458 | INFO     | corecount: 9
[2026-01-09 16:05:50] 2026-01-09 21:05:05,458 | INFO     | event service: False
[2026-01-09 16:05:50] 2026-01-09 21:05:05,458 | INFO     | sizes: {0: 2283143, 1: 2283828, 2: 2284027, 11: 2284289, 13: 2284317, 17224: 2316575, 17228: 2325629, 17238: 2325767}
[2026-01-09 16:05:50] 2026-01-09 21:05:05,459 | INFO     | --------------------------------------------------
[2026-01-09 16:05:50] 2026-01-09 21:05:05,459 | INFO     | 
[2026-01-09 16:05:50] 2026-01-09 21:05:05,459 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-09 16:05:50] 2026-01-09 21:05:05,481 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 16:05:50] 2026-01-09 21:05:05,482 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 16:05:50] 2026-01-09 21:05:05,482 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 16:05:50] 2026-01-09 21:05:05,482 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 16:05:50] 2026-01-09 21:05:05,482 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 16:05:50] 2026-01-09 21:05:05,482 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 16:05:50] 2026-01-09 21:05:05,482 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 16:05:50] 2026-01-09 21:05:05,482 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 16:05:50] 2026-01-09 21:05:05,482 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 16:05:50] 2026-01-09 21:05:05,482 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 16:05:50] 2026-01-09 21:05:05,482 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 16:05:50] 2026-01-09 21:05:05,482 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 16:05:50] 2026-01-09 21:05:05,482 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 16:05:50] 2026-01-09 21:05:05,482 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 16:05:50] 2026-01-09 21:05:05,483 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 16:05:50] 2026-01-09 21:05:05,483 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 16:05:50] 2026-01-09 21:05:05,483 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 16:05:50] 2026-01-09 21:05:05,483 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 16:05:50] 2026-01-09 21:05:05,483 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 16:05:50] 2026-01-09 21:05:05,483 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 16:05:50] 2026-01-09 21:05:05,483 | INFO     | job 6963165960 has completed (purged errors)
[2026-01-09 16:05:50] 2026-01-09 21:05:05,483 | INFO     | overall cleanup function is called
[2026-01-09 16:05:50] 2026-01-09 21:05:06,492 | INFO     | --- collectZombieJob: --- 10, [964006]
[2026-01-09 16:05:50] 2026-01-09 21:05:06,492 | INFO     | zombie collector waiting for pid 964006
[2026-01-09 16:05:50] 2026-01-09 21:05:06,492 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 16:05:50] 2026-01-09 21:05:06,492 | INFO     | collected zombie processes
[2026-01-09 16:05:50] 2026-01-09 21:05:06,493 | INFO     | will attempt to kill all subprocesses of pid=964006
[2026-01-09 16:05:50] 2026-01-09 21:05:06,891 | INFO     | process IDs to be killed: [964006] (in reverse order)
[2026-01-09 16:05:50] 2026-01-09 21:05:07,030 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 16:05:50] 2026-01-09 21:05:07,031 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 16:05:50] 2026-01-09 21:05:07,045 | INFO     | did not find any defunct processes belonging to 964006
[2026-01-09 16:05:50] 2026-01-09 21:05:07,057 | INFO     | did not find any defunct processes belonging to 964006
[2026-01-09 16:05:50] 2026-01-09 21:05:07,058 | INFO     | ready for new job
[2026-01-09 16:05:50] 2026-01-09 21:05:07,058 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 16:05:50] 2026-01-09 21:05:07,060 | INFO     | ***************************************
[2026-01-09 16:05:50] 2026-01-09 21:05:07,060 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 16:05:50] 2026-01-09 21:05:07,060 | INFO     | ***************************************
[2026-01-09 16:05:50] 2026-01-09 21:05:07,060 | INFO     | 
[2026-01-09 16:05:50] 2026-01-09 21:05:07,066 | INFO     | architecture information:
[2026-01-09 16:05:50] 2026-01-09 21:05:07,070 | INFO     | executing command: cat /etc/os-release
[2026-01-09 16:05:50] 2026-01-09 21:05:07,091 | INFO     | cat /etc/os-release:
[2026-01-09 16:05:50] NAME="CentOS Linux"
[2026-01-09 16:05:50] VERSION="7 (Core)"
[2026-01-09 16:05:50] ID="centos"
[2026-01-09 16:05:50] ID_LIKE="rhel fedora"
[2026-01-09 16:05:50] VERSION_ID="7"
[2026-01-09 16:05:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 16:05:50] ANSI_COLOR="0;31"
[2026-01-09 16:05:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 16:05:50] HOME_URL="https://www.centos.org/"
[2026-01-09 16:05:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 16:05:50] 
[2026-01-09 16:05:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 16:05:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 16:05:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 16:05:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 16:05:50] 
[2026-01-09 16:05:50] 2026-01-09 21:05:07,092 | INFO     | ***************************************
[2026-01-09 16:05:50] 2026-01-09 21:05:07,595 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-09 16:05:50] 2026-01-09 21:05:07,658 | INFO     | sufficient remaining disk space (126698389504 B)
[2026-01-09 16:05:50] 2026-01-09 21:05:07,659 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 16:05:50] 2026-01-09 21:05:07,659 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 16:05:50] 2026-01-09 21:05:07,659 | INFO     | update_server=False
[2026-01-09 16:05:50] 2026-01-09 21:05:07,659 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 16:05:50] 2026-01-09 21:05:07,733 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 16:05:50] 2026-01-09 21:05:07,733 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 16:05:50] 2026-01-09 21:05:07,733 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 16:05:50] 2026-01-09 21:05:07,734 | INFO     | will abort loop
[2026-01-09 16:05:50] 2026-01-09 21:05:08,072 | INFO     | all data control threads have been joined
[2026-01-09 16:05:50] 2026-01-09 21:05:08,614 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 16:05:50] 2026-01-09 21:05:08,665 | INFO     | [job] retrieve thread has finished
[2026-01-09 16:05:50] 2026-01-09 21:05:08,740 | INFO     | [job] job monitor thread has finished
[2026-01-09 16:05:50] 2026-01-09 21:05:08,829 | INFO     | [payload] failed_post thread has finished
[2026-01-09 16:05:50] 2026-01-09 21:05:09,065 | INFO     | all payload control threads have been joined
[2026-01-09 16:05:50] 2026-01-09 21:05:09,078 | INFO     | [data] control thread has finished
[2026-01-09 16:05:50] 2026-01-09 21:05:09,299 | INFO     | [payload] validate_post thread has finished
[2026-01-09 16:05:50] 2026-01-09 21:05:09,325 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 16:05:50] 2026-01-09 21:05:09,356 | INFO     | all job control threads have been joined
[2026-01-09 16:05:50] 2026-01-09 21:05:09,566 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 16:05:50] 2026-01-09 21:05:09,653 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 16:05:50] 2026-01-09 21:05:09,948 | INFO     | [data] copytool_in thread has finished
[2026-01-09 16:05:50] 2026-01-09 21:05:09,988 | INFO     | [job] validate thread has finished
[2026-01-09 16:05:50] 2026-01-09 21:05:10,016 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 16:05:50] 2026-01-09 21:05:10,071 | INFO     | [payload] control thread has finished
[2026-01-09 16:05:50] 2026-01-09 21:05:10,362 | INFO     | [job] control thread has finished
[2026-01-09 16:05:50] 2026-01-09 21:05:10,465 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 16:05:50] 2026-01-09 21:05:10,621 | INFO     | [data] copytool_out thread has finished
[2026-01-09 16:05:50] 2026-01-09 21:05:10,676 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 16:05:50] 2026-01-09 21:05:11,471 | INFO     | [job] queue monitor thread has finished
[2026-01-09 16:05:50] 2026-01-09 21:05:14,688 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 16:05:50] 2026-01-09 21:05:39,218 | INFO     | PID=955742 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 16:05:50] 2026-01-09 21:05:39,219 | INFO     | .. there are 17 such processes running
[2026-01-09 16:05:50] 2026-01-09 21:05:39,219 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 16:05:50] 2026-01-09 21:05:39,219 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 16:05:50] 2026-01-09 21:05:39,219 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 16:05:50] 2026-01-09 21:05:43,506 | INFO     | [monitor] cgroup control has ended
[2026-01-09 16:05:50] 2026-01-09 21:05:45,080 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140501582812992)>', '<ExcThread(monitor, started 140501231580928)>']
[2026-01-09 16:05:50] 2026-01-09 21:05:45,255 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 16:05:50] 2026-01-09 21:05:45,255 | INFO     | [monitor] control thread has ended
[2026-01-09 16:05:50] 2026-01-09 21:05:50,105 | INFO     | all workflow threads have been joined
[2026-01-09 16:05:50] 2026-01-09 21:05:50,105 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 16:05:50] 2026-01-09 21:05:50,106 | INFO     | traces error code: 0
[2026-01-09 16:05:50] 2026-01-09 21:05:50,106 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 16:05:50] 2026-01-09 21:05:50,284 [wrapper] ==== pilot stdout END ====
[2026-01-09 16:05:50] 2026-01-09 21:05:50,286 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 16:05:50] 2026-01-09 21:05:50,293 [wrapper] pilotpid: 955742
[2026-01-09 16:05:50] 2026-01-09 21:05:50,296 [wrapper] Pilot exit status: 0
[2026-01-09 16:05:50] 2026-01-09 21:05:50,330 [wrapper] pandaids: 6963165960
[2026-01-09 16:05:50] 2026-01-09 21:05:50,418 [wrapper] cleanup supervisor_pilot 1476121 955743
[2026-01-09 16:05:50] 2026-01-09 21:05:50,421 [wrapper] Test setup, not cleaning
[2026-01-09 16:05:50] 2026-01-09 21:05:50,424 [wrapper] apfmon messages muted
[2026-01-09 16:05:50] 2026-01-09 21:05:50,456 [wrapper] ==== wrapper stdout END ====
[2026-01-09 16:05:50] 2026-01-09 21:05:50,464 [wrapper] ==== wrapper stderr END ====
[2026-01-09 16:05:50]  *** Error codes and diagnostics ***
[2026-01-09 16:05:50]     "exeErrorCode": 0,
[2026-01-09 16:05:50]     "exeErrorDiag": "",
[2026-01-09 16:05:50]     "pilotErrorCode": 0,
[2026-01-09 16:05:50]     "pilotErrorDiag": "",
[2026-01-09 16:05:50]  *** Listing of results directory ***
[2026-01-09 16:05:50] total 445512
[2026-01-09 16:05:50] -rwx------. 1 boincer umatlas     36322 Jan  8 19:57 runpilot2-wrapper.sh
[2026-01-09 16:05:50] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 19:57 pilot3.tar.gz
[2026-01-09 16:05:50] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 19:57 queuedata.json
[2026-01-09 16:05:50] -rw-r--r--. 1 boincer umatlas       100 Jan  9 11:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 16:05:50] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 11:16 run_atlas
[2026-01-09 16:05:50] -rw-r--r--. 1 boincer umatlas       105 Jan  9 11:16 job.xml
[2026-01-09 16:05:50] -rw-r--r--. 2 boincer umatlas 225183020 Jan  9 11:16 EVNT.47898824._001358.pool.root.1
[2026-01-09 16:05:50] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 11:16 start_atlas.sh
[2026-01-09 16:05:50] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 11:16 shared
[2026-01-09 16:05:50] -rw-r--r--. 2 boincer umatlas    592391 Jan  9 11:16 input.tar.gz
[2026-01-09 16:05:50] -rw-r--r--. 1 boincer umatlas         0 Jan  9 11:16 boinc_lockfile
[2026-01-09 16:05:50] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 11:16 pandaJob.out
[2026-01-09 16:05:50] -rw-------. 1 boincer umatlas        57 Jan  9 11:16 setup.sh.local
[2026-01-09 16:05:50] -rw-------. 1 boincer umatlas    989356 Jan  9 11:17 agis_schedconf.cvmfs.json
[2026-01-09 16:05:50] drwx------. 5 boincer umatlas      4096 Jan  9 11:17 pilot3
[2026-01-09 16:05:50] -rw-r--r--. 1 boincer umatlas      6958 Jan  9 16:03 init_data.xml
[2026-01-09 16:05:50] -rw-------. 1 boincer umatlas 221321363 Jan  9 16:04 HITS.47898826._035073.pool.root.1
[2026-01-09 16:05:50] -rw-r--r--. 1 boincer umatlas       530 Jan  9 16:04 boinc_task_state.xml
[2026-01-09 16:05:50] -rw-------. 1 boincer umatlas        95 Jan  9 16:04 pilot_heartbeat.json
[2026-01-09 16:05:50] -rw-------. 1 boincer umatlas      1028 Jan  9 16:04 memory_monitor_summary.json
[2026-01-09 16:05:50] -rw-------. 1 boincer umatlas   1516240 Jan  9 16:04 agis_ddmendpoints.agis.ALL.json
[2026-01-09 16:05:50] -rw-------. 1 boincer umatlas    532022 Jan  9 16:04 log.47898826._035073.job.log.tgz.1
[2026-01-09 16:05:50] -rw-------. 1 boincer umatlas      7772 Jan  9 16:05 heartbeat.json
[2026-01-09 16:05:50] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 16:05 boinc_mmap_file
[2026-01-09 16:05:50] -rw-r--r--. 1 boincer umatlas        28 Jan  9 16:05 wrapper_checkpoint.txt
[2026-01-09 16:05:50] -rw-------. 1 boincer umatlas      5010 Jan  9 16:05 pilotlog.txt
[2026-01-09 16:05:50] -rw-------. 1 boincer umatlas   2360164 Jan  9 16:05 log.47898826._035073.job.log.1
[2026-01-09 16:05:50] -rw-------. 1 boincer umatlas       357 Jan  9 16:05 output.list
[2026-01-09 16:05:50] -rw-r--r--. 1 boincer umatlas       620 Jan  9 16:05 runtime_log
[2026-01-09 16:05:50] -rw-------. 1 boincer umatlas   2908160 Jan  9 16:05 result.tar.gz
[2026-01-09 16:05:50] -rw-r--r--. 1 boincer umatlas      9343 Jan  9 16:05 runtime_log.err
[2026-01-09 16:05:50] -rw-------. 1 boincer umatlas       656 Jan  9 16:05 deGNDmPzFy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmrllKDmE2zQKn.diag
[2026-01-09 16:05:50] -rw-r--r--. 1 boincer umatlas     20521 Jan  9 16:05 stderr.txt
[2026-01-09 16:05:50] HITS file was successfully produced:
[2026-01-09 16:05:50] -rw-------. 1 boincer umatlas 221321363 Jan  9 16:04 shared/HITS.pool.root.1
[2026-01-09 16:05:50]  *** Contents of shared directory: ***
[2026-01-09 16:05:50] total 439488
[2026-01-09 16:05:50] -rw-r--r--. 2 boincer umatlas 225183020 Jan  9 11:16 ATLAS.root_0
[2026-01-09 16:05:50] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 11:16 start_atlas.sh
[2026-01-09 16:05:50] -rw-r--r--. 2 boincer umatlas    592391 Jan  9 11:16 input.tar.gz
[2026-01-09 16:05:50] -rw-------. 1 boincer umatlas 221321363 Jan  9 16:04 HITS.pool.root.1
[2026-01-09 16:05:50] -rw-------. 1 boincer umatlas   2908160 Jan  9 16:05 result.tar.gz
16:05:52 (951917): run_atlas exited; CPU time 45966.777571
16:05:52 (951917): called boinc_finish(0)

</stderr_txt>
]]>

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