Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:14:51 (2395490): wrapper (7.7.26015): starting
11:14:51 (2395490): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 11:14:51] Arguments: --nthreads 8
[2026-01-09 11:14:51] Threads: 8
[2026-01-09 11:14:51] Checking for CVMFS
[2026-01-09 11:14:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 11:14:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 11:14:52] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 11:14:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 11:14:53] 2.13.3.0 6948 22420 218144 154948 2 423 34624933 40960001 12639 16776704 0 24248524 99.676 20733380 43671 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 11:14:53] CVMFS is ok
[2026-01-09 11:14:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 11:14:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 11:14:53] Further information can be found at the LHC@home message board.
[2026-01-09 11:14:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 11:14:53] Checking for apptainer binary...
[2026-01-09 11:14:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 11:14:53] Running /usr/bin/apptainer --version
[2026-01-09 11:14:53] apptainer version 1.4.5-2.el9
[2026-01-09 11:14:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 11:15:13] c-206-41.aglt2.org
[2026-01-09 11:15:13] apptainer works
[2026-01-09 11:15:13] Set ATHENA_PROC_NUMBER=8
[2026-01-09 11:15:13] Set ATHENA_CORE_NUMBER=8
[2026-01-09 11:15:14] Starting ATLAS job with PandaID=6963165661
[2026-01-09 11:15:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 19:45:22]  *** The last 200 lines of the pilot log: ***
[2026-01-09 19:45:22] 2026-01-09 21:36:52,321 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 19:45:22] 2026-01-09 21:36:52,465 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 19:45:22] 2026-01-09 21:36:52,498 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3198.058078124999
[2026-01-09 19:45:22] 2026-01-09 21:36:52,516 | INFO     | time since job start (19252s) is within the limit (349056.0s)
[2026-01-09 19:45:22] 2026-01-09 21:36:52,578 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6963165661/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 19:45:22] 2026-01-09 21:36:52,579 | INFO     | extracted standard info from prmon json
[2026-01-09 19:45:22] 2026-01-09 21:36:52,579 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 19:45:22] 2026-01-09 21:36:52,579 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 19:45:22] 2026-01-09 21:36:52,587 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 19:45:22] 2026-01-09 21:36:52,587 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 19:45:22] 2026-01-09 21:36:52,624 | INFO     | fitting pss+swap vs Time
[2026-01-09 19:45:22] 2026-01-09 21:36:52,624 | INFO     | sum of square deviations: 9508585414.479227
[2026-01-09 19:45:22] 2026-01-09 21:36:52,626 | INFO     | sum of deviations: 47654835522.07031
[2026-01-09 19:45:22] 2026-01-09 21:36:52,626 | INFO     | mean x: 1767985019.6357827
[2026-01-09 19:45:22] 2026-01-09 21:36:52,626 | INFO     | mean y: 2522541.38658147
[2026-01-09 19:45:22] 2026-01-09 21:36:52,626 | INFO     | intersect: -8858210327.24085
[2026-01-09 19:45:22] 2026-01-09 21:36:52,627 | INFO     | chi2: 7.237751454446614
[2026-01-09 19:45:22] 2026-01-09 21:36:52,627 | INFO     | sum of square deviations: 9060171850.996798
[2026-01-09 19:45:22] 2026-01-09 21:36:52,652 | INFO     | sum of deviations: 66586541500.487
[2026-01-09 19:45:22] 2026-01-09 21:36:52,652 | INFO     | mean x: 1767984867.1396103
[2026-01-09 19:45:22] 2026-01-09 21:36:52,652 | INFO     | mean y: 2528894.0584415584
[2026-01-09 19:45:22] 2026-01-09 21:36:52,652 | INFO     | intersect: -12991043376.325447
[2026-01-09 19:45:22] 2026-01-09 21:36:52,652 | INFO     | chi2: 6.602774854841567
[2026-01-09 19:45:22] 2026-01-09 21:36:52,652 | INFO     | current chi2=6.602774854841567 (change=8.773119712682876 %)
[2026-01-09 19:45:22] 2026-01-09 21:36:52,653 | INFO     | right removable region: 307
[2026-01-09 19:45:22] 2026-01-09 21:36:52,653 | INFO     | sum of square deviations: 9060088402.425293
[2026-01-09 19:45:22] 2026-01-09 21:36:52,662 | INFO     | sum of deviations: -58495577038.224014
[2026-01-09 19:45:22] 2026-01-09 21:36:52,662 | INFO     | mean x: 1767985172.1461039
[2026-01-09 19:45:22] 2026-01-09 21:36:52,662 | INFO     | mean y: 2558605.938311688
[2026-01-09 19:45:22] 2026-01-09 21:36:52,662 | INFO     | intersect: 11417382418.477037
[2026-01-09 19:45:22] 2026-01-09 21:36:52,662 | INFO     | chi2: 2.8754714074545387
[2026-01-09 19:45:22] 2026-01-09 21:36:52,662 | INFO     | current chi2=2.8754714074545387 (change=60.271205421292095 %)
[2026-01-09 19:45:22] 2026-01-09 21:36:52,663 | INFO     | sum of square deviations: 8625954450.91743
[2026-01-09 19:45:22] 2026-01-09 21:36:52,665 | INFO     | sum of deviations: -119558815952.13528
[2026-01-09 19:45:22] 2026-01-09 21:36:52,665 | INFO     | mean x: 1767985324.650165
[2026-01-09 19:45:22] 2026-01-09 21:36:52,665 | INFO     | mean y: 2579986.706270627
[2026-01-09 19:45:22] 2026-01-09 21:36:52,665 | INFO     | intersect: 24507489355.134907
[2026-01-09 19:45:22] 2026-01-09 21:36:52,684 | INFO     | chi2: 1.263296513635603
[2026-01-09 19:45:22] 2026-01-09 21:36:52,684 | INFO     | current chi2=1.263296513635603 (change=56.06645538673904 %)
[2026-01-09 19:45:22] 2026-01-09 21:36:52,684 | INFO     | sum of square deviations: 8205914518.899294
[2026-01-09 19:45:22] 2026-01-09 21:36:52,686 | INFO     | sum of deviations: -128827756836.37593
[2026-01-09 19:45:22] 2026-01-09 21:36:52,686 | INFO     | mean x: 1767985477.1543624
[2026-01-09 19:45:22] 2026-01-09 21:36:52,686 | INFO     | mean y: 2583326.9429530203
[2026-01-09 19:45:22] 2026-01-09 21:36:52,686 | INFO     | intersect: 27758856270.868008
[2026-01-09 19:45:22] 2026-01-09 21:36:52,687 | INFO     | chi2: 1.169911572189124
[2026-01-09 19:45:22] 2026-01-09 21:36:52,687 | INFO     | current chi2=1.169911572189124 (change=7.3921633154618 %)
[2026-01-09 19:45:22] 2026-01-09 21:36:52,687 | INFO     | left removable region: 30
[2026-01-09 19:45:22] 2026-01-09 21:36:52,687 | INFO     | sum of square deviations: 6590457765.444011
[2026-01-09 19:45:22] 2026-01-09 21:36:52,698 | INFO     | sum of deviations: -73029592039.18051
[2026-01-09 19:45:22] 2026-01-09 21:36:52,698 | INFO     | mean x: 1767985751.66787
[2026-01-09 19:45:22] 2026-01-09 21:36:52,698 | INFO     | mean y: 2577113.5415162453
[2026-01-09 19:45:22] 2026-01-09 21:36:52,698 | INFO     | intersect: 19593822937.524082
[2026-01-09 19:45:22] 2026-01-09 21:36:52,698 | INFO     | chi2: 0.41340963723865365
[2026-01-09 19:45:22] 2026-01-09 21:36:52,698 | INFO     | current memory leak: -11.08 B/s (using 277 data points, chi2=0.41)
[2026-01-09 19:45:22] 2026-01-09 21:36:52,699 | INFO     | could have reported an average CPU frequency of 3223 MHz (14 samples)
[2026-01-09 19:45:22] 2026-01-09 21:36:52,699 | INFO     | ..............................
[2026-01-09 19:45:22] 2026-01-09 21:36:52,699 | INFO     | . Timing measurements:
[2026-01-09 19:45:22] 2026-01-09 21:36:52,699 | INFO     | . get job = 0 s
[2026-01-09 19:45:22] 2026-01-09 21:36:52,699 | INFO     | . initial setup = 7 s
[2026-01-09 19:45:22] 2026-01-09 21:36:52,699 | INFO     | . payload setup = 42 s
[2026-01-09 19:45:22] 2026-01-09 21:36:52,699 | INFO     | . stage-in = 0 s
[2026-01-09 19:45:22] 2026-01-09 21:36:52,699 | INFO     | . payload execution = 19103 s
[2026-01-09 19:45:22] 2026-01-09 21:36:52,699 | INFO     | . stage-out = 4 s
[2026-01-09 19:45:22] 2026-01-09 21:36:52,699 | INFO     | . log creation = 1 s
[2026-01-09 19:45:22] 2026-01-09 21:36:52,699 | INFO     | ..............................
[2026-01-09 19:45:22] 2026-01-09 21:36:53,214 | INFO     | 
[2026-01-09 19:45:22] 2026-01-09 21:36:53,214 | INFO     | job summary report
[2026-01-09 19:45:22] 2026-01-09 21:36:53,214 | INFO     | --------------------------------------------------
[2026-01-09 19:45:22] 2026-01-09 21:36:53,214 | INFO     | PanDA job id: 6963165661
[2026-01-09 19:45:22] 2026-01-09 21:36:53,214 | INFO     | task id: 47898826
[2026-01-09 19:45:22] 2026-01-09 21:36:53,214 | INFO     | errors: (none)
[2026-01-09 19:45:22] 2026-01-09 21:36:53,215 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 19:45:22] 2026-01-09 21:36:53,215 | INFO     | pilot state: finished 
[2026-01-09 19:45:22] 2026-01-09 21:36:53,215 | INFO     | transexitcode: 0
[2026-01-09 19:45:22] 2026-01-09 21:36:53,215 | INFO     | exeerrorcode: 0
[2026-01-09 19:45:22] 2026-01-09 21:36:53,215 | INFO     | exeerrordiag: 
[2026-01-09 19:45:22] 2026-01-09 21:36:53,215 | INFO     | exitcode: 0
[2026-01-09 19:45:22] 2026-01-09 21:36:53,215 | INFO     | exitmsg: OK
[2026-01-09 19:45:22] 2026-01-09 21:36:53,215 | INFO     | cpuconsumptiontime: 48201 s
[2026-01-09 19:45:22] 2026-01-09 21:36:53,215 | INFO     | nevents: 400
[2026-01-09 19:45:22] 2026-01-09 21:36:53,215 | INFO     | neventsw: 0
[2026-01-09 19:45:22] 2026-01-09 21:36:53,215 | INFO     | pid: 2409453
[2026-01-09 19:45:22] 2026-01-09 21:36:53,215 | INFO     | pgrp: 2409453
[2026-01-09 19:45:22] 2026-01-09 21:36:53,215 | INFO     | corecount: 8
[2026-01-09 19:45:22] 2026-01-09 21:36:53,215 | INFO     | event service: False
[2026-01-09 19:45:22] 2026-01-09 21:36:53,215 | INFO     | sizes: {0: 2283143, 1: 2283999, 12: 2283999, 23: 2284027, 27: 2284317, 34: 2284345, 19150: 2317724, 19151: 2317723, 19156: 2326861, 19185: 2326999}
[2026-01-09 19:45:22] 2026-01-09 21:36:53,215 | INFO     | --------------------------------------------------
[2026-01-09 19:45:22] 2026-01-09 21:36:53,215 | INFO     | 
[2026-01-09 19:45:22] 2026-01-09 21:36:53,215 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-09 19:45:22] 2026-01-09 21:36:53,515 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 19:45:22] 2026-01-09 21:36:53,516 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 19:45:22] 2026-01-09 21:36:53,516 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 19:45:22] 2026-01-09 21:36:53,516 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 19:45:22] 2026-01-09 21:36:53,516 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 19:45:22] 2026-01-09 21:36:53,516 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 19:45:22] 2026-01-09 21:36:53,516 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 19:45:22] 2026-01-09 21:36:53,516 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 19:45:22] 2026-01-09 21:36:53,516 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 19:45:22] 2026-01-09 21:36:53,516 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 19:45:22] 2026-01-09 21:36:53,516 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 19:45:22] 2026-01-09 21:36:53,516 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 19:45:22] 2026-01-09 21:36:53,516 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 19:45:22] 2026-01-09 21:36:53,516 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 19:45:22] 2026-01-09 21:36:53,516 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 19:45:22] 2026-01-09 21:36:53,516 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 19:45:22] 2026-01-09 21:36:53,517 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 19:45:22] 2026-01-09 21:36:53,517 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 19:45:22] 2026-01-09 21:36:53,517 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 19:45:22] 2026-01-09 21:36:53,517 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 19:45:22] 2026-01-09 21:36:53,517 | INFO     | job 6963165661 has completed (purged errors)
[2026-01-09 19:45:22] 2026-01-09 21:36:53,517 | INFO     | overall cleanup function is called
[2026-01-09 19:45:22] 2026-01-09 21:36:54,525 | INFO     | --- collectZombieJob: --- 10, [2409453]
[2026-01-09 19:45:22] 2026-01-09 21:36:54,525 | INFO     | zombie collector waiting for pid 2409453
[2026-01-09 19:45:22] 2026-01-09 21:36:54,525 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 19:45:22] 2026-01-09 21:36:54,525 | INFO     | collected zombie processes
[2026-01-09 19:45:22] 2026-01-09 21:36:54,525 | INFO     | will attempt to kill all subprocesses of pid=2409453
[2026-01-09 19:45:22] 2026-01-09 21:36:55,083 | INFO     | process IDs to be killed: [2409453] (in reverse order)
[2026-01-09 19:45:22] 2026-01-09 21:36:55,316 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 19:45:22] 2026-01-09 21:36:55,316 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 19:45:22] 2026-01-09 21:36:55,361 | INFO     | did not find any defunct processes belonging to 2409453
[2026-01-09 19:45:22] 2026-01-09 21:36:55,438 | INFO     | did not find any defunct processes belonging to 2409453
[2026-01-09 19:45:22] 2026-01-09 21:36:55,439 | INFO     | ready for new job
[2026-01-09 19:45:22] 2026-01-09 21:36:55,439 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 19:45:22] 2026-01-09 21:36:55,441 | INFO     | ***************************************
[2026-01-09 19:45:22] 2026-01-09 21:36:55,441 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 19:45:22] 2026-01-09 21:36:55,441 | INFO     | ***************************************
[2026-01-09 19:45:22] 2026-01-09 21:36:55,441 | INFO     | 
[2026-01-09 19:45:22] 2026-01-09 21:36:55,476 | INFO     | architecture information:
[2026-01-09 19:45:22] 2026-01-09 21:36:55,485 | INFO     | executing command: cat /etc/os-release
[2026-01-09 19:45:22] 2026-01-09 21:36:55,641 | INFO     | cat /etc/os-release:
[2026-01-09 19:45:22] NAME="CentOS Linux"
[2026-01-09 19:45:22] VERSION="7 (Core)"
[2026-01-09 19:45:22] ID="centos"
[2026-01-09 19:45:22] ID_LIKE="rhel fedora"
[2026-01-09 19:45:22] VERSION_ID="7"
[2026-01-09 19:45:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 19:45:22] ANSI_COLOR="0;31"
[2026-01-09 19:45:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 19:45:22] HOME_URL="https://www.centos.org/"
[2026-01-09 19:45:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 19:45:22] 
[2026-01-09 19:45:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 19:45:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 19:45:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 19:45:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 19:45:22] 
[2026-01-09 19:45:22] 2026-01-09 21:36:55,642 | INFO     | ***************************************
[2026-01-09 19:45:22] 2026-01-09 21:36:56,145 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-09 19:45:22] 2026-01-09 21:36:56,342 | INFO     | sufficient remaining disk space (84994424832 B)
[2026-01-09 19:45:22] 2026-01-09 21:36:56,342 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 19:45:22] 2026-01-09 21:36:56,342 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 19:45:22] 2026-01-09 21:36:56,342 | INFO     | update_server=False
[2026-01-09 19:45:22] 2026-01-09 21:36:56,343 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 19:45:22] 2026-01-09 21:36:56,344 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 19:45:22] 2026-01-09 21:36:56,344 | INFO     | aborting loop
[2026-01-09 19:45:22] 2026-01-09 21:36:56,351 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 19:45:22] 2026-01-09 21:36:56,351 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 19:45:22] 2026-01-09 21:36:56,644 | INFO     | all payload control threads have been joined
[2026-01-09 19:45:22] 2026-01-09 21:36:56,713 | INFO     | all data control threads have been joined
[2026-01-09 19:45:22] 2026-01-09 21:36:56,854 | INFO     | all job control threads have been joined
[2026-01-09 19:45:22] 2026-01-09 21:36:57,348 | INFO     | [job] retrieve thread has finished
[2026-01-09 19:45:22] 2026-01-09 21:36:57,361 | INFO     | [job] job monitor thread has finished
[2026-01-09 19:45:22] 2026-01-09 21:36:57,479 | INFO     | [job] validate thread has finished
[2026-01-09 19:45:22] 2026-01-09 21:36:57,650 | INFO     | [payload] control thread has finished
[2026-01-09 19:45:22] 2026-01-09 21:36:57,719 | INFO     | [data] control thread has finished
[2026-01-09 19:45:22] 2026-01-09 21:36:57,860 | INFO     | [job] control thread has finished
[2026-01-09 19:45:22] 2026-01-09 21:36:57,959 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 19:45:22] 2026-01-09 21:36:58,094 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 19:45:22] 2026-01-09 21:36:58,160 | INFO     | [payload] validate_post thread has finished
[2026-01-09 19:45:22] 2026-01-09 21:36:58,195 | INFO     | [payload] failed_post thread has finished
[2026-01-09 19:45:22] 2026-01-09 21:36:58,321 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 19:45:22] 2026-01-09 21:36:58,359 | INFO     | [data] copytool_out thread has finished
[2026-01-09 19:45:22] 2026-01-09 21:36:58,594 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 19:45:22] 2026-01-09 21:36:58,632 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 19:45:22] 2026-01-09 21:36:58,653 | INFO     | [data] copytool_in thread has finished
[2026-01-09 19:45:22] 2026-01-09 21:36:58,965 | INFO     | [job] queue monitor thread has finished
[2026-01-09 19:45:22] 2026-01-09 21:37:00,361 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 19:45:22] 2026-01-09 21:37:27,518 | INFO     | PID=2400982 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 19:45:22] 2026-01-09 21:37:27,518 | INFO     | .. there are 11 such processes running
[2026-01-09 19:45:22] 2026-01-09 21:37:27,518 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 19:45:22] 2026-01-09 21:37:27,519 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 19:45:22] 2026-01-09 21:37:27,519 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 19:45:22] 2026-01-09 21:37:32,814 | INFO     | [monitor] cgroup control has ended
[2026-01-09 19:45:22] 2026-01-09 21:37:34,143 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139655565485888)>', '<ExcThread(monitor, started 139655206917888)>']
[2026-01-09 19:45:22] 2026-01-09 21:37:34,559 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 19:45:22] 2026-01-09 21:37:34,559 | INFO     | [monitor] control thread has ended
[2026-01-09 19:45:22] 2026-01-09 21:37:39,169 | INFO     | all workflow threads have been joined
[2026-01-09 19:45:22] 2026-01-09 21:37:39,169 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 19:45:22] 2026-01-09 21:37:39,170 | INFO     | traces error code: 0
[2026-01-09 19:45:22] 2026-01-09 21:37:39,170 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 19:45:22] 2026-01-09 21:37:39,459 [wrapper] ==== pilot stdout END ====
[2026-01-09 19:45:22] 2026-01-09 21:37:39,501 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 19:45:22] 2026-01-09 21:37:39,599 [wrapper] pilotpid: 2400982
[2026-01-09 19:45:22] 2026-01-09 21:37:39,628 [wrapper] Pilot exit status: 0
[2026-01-09 19:45:22] 2026-01-09 21:37:39,766 [wrapper] pandaids: 6963165661
[2026-01-09 19:45:22] 2026-01-09 21:37:40,553 [wrapper] cleanup supervisor_pilot 2897258 2400983
[2026-01-09 19:45:22] 2026-01-09 21:37:40,591 [wrapper] Test setup, not cleaning
[2026-01-09 19:45:22] 2026-01-09 21:37:40,621 [wrapper] apfmon messages muted
[2026-01-09 19:45:22] 2026-01-09 21:37:40,665 [wrapper] ==== wrapper stdout END ====
[2026-01-09 19:45:22] 2026-01-09 21:37:40,745 [wrapper] ==== wrapper stderr END ====
[2026-01-09 19:45:22]  *** Error codes and diagnostics ***
[2026-01-09 19:45:22]     "exeErrorCode": 0,
[2026-01-09 19:45:22]     "exeErrorDiag": "",
[2026-01-09 19:45:22]     "pilotErrorCode": 0,
[2026-01-09 19:45:22]     "pilotErrorDiag": "",
[2026-01-09 19:45:22]  *** Listing of results directory ***
[2026-01-09 19:45:22] total 452488
[2026-01-09 19:45:22] -rwx------. 1 boincer umatlas     36322 Jan  8 19:56 runpilot2-wrapper.sh
[2026-01-09 19:45:22] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 19:57 pilot3.tar.gz
[2026-01-09 19:45:22] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 19:57 queuedata.json
[2026-01-09 19:45:22] -rw-r--r--. 1 boincer umatlas       100 Jan  9 11:14 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 19:45:22] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 11:14 run_atlas
[2026-01-09 19:45:22] -rw-r--r--. 1 boincer umatlas       105 Jan  9 11:14 job.xml
[2026-01-09 19:45:22] -rw-r--r--. 2 boincer umatlas 223990566 Jan  9 11:14 EVNT.47898824._001351.pool.root.1
[2026-01-09 19:45:22] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 11:14 start_atlas.sh
[2026-01-09 19:45:22] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 11:14 shared
[2026-01-09 19:45:22] -rw-r--r--. 2 boincer umatlas    592393 Jan  9 11:14 input.tar.gz
[2026-01-09 19:45:22] -rw-r--r--. 1 boincer umatlas         0 Jan  9 11:14 boinc_lockfile
[2026-01-09 19:45:22] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 11:15 pandaJob.out
[2026-01-09 19:45:22] -rw-------. 1 boincer umatlas        57 Jan  9 11:15 setup.sh.local
[2026-01-09 19:45:22] -rw-------. 1 boincer umatlas    989377 Jan  9 11:15 agis_schedconf.cvmfs.json
[2026-01-09 19:45:22] drwx------. 5 boincer umatlas      4096 Jan  9 11:16 pilot3
[2026-01-09 19:45:22] -rw-------. 1 boincer umatlas 229381302 Jan  9 16:34 HITS.47898826._034880.pool.root.1
[2026-01-09 19:45:22] -rw-r--r--. 1 boincer umatlas       531 Jan  9 16:34 boinc_task_state.xml
[2026-01-09 19:45:22] -rw-------. 1 boincer umatlas      1030 Jan  9 16:36 memory_monitor_summary.json
[2026-01-09 19:45:22] -rw-------. 1 boincer umatlas   1516240 Jan  9 16:36 agis_ddmendpoints.agis.ALL.json
[2026-01-09 19:45:22] -rw-------. 1 boincer umatlas    515489 Jan  9 16:36 log.47898826._034880.job.log.tgz.1
[2026-01-09 19:45:22] -rw-------. 1 boincer umatlas        95 Jan  9 16:36 pilot_heartbeat.json
[2026-01-09 19:45:22] -rw-------. 1 boincer umatlas      7779 Jan  9 16:36 heartbeat.json
[2026-01-09 19:45:22] -rw-------. 1 boincer umatlas      4824 Jan  9 16:37 pilotlog.txt
[2026-01-09 19:45:22] -rw-------. 1 boincer umatlas   2514396 Jan  9 16:37 log.47898826._034880.job.log.1
[2026-01-09 19:45:22] -rw-------. 1 boincer umatlas       357 Jan  9 16:37 output.list
[2026-01-09 19:45:22] -rw-r--r--. 1 boincer umatlas       620 Jan  9 16:37 runtime_log
[2026-01-09 19:45:22] -rw-------. 1 boincer umatlas   3051520 Jan  9 16:37 result.tar.gz
[2026-01-09 19:45:22] -rw-r--r--. 1 boincer umatlas      9343 Jan  9 16:37 runtime_log.err
[2026-01-09 19:45:22] -rw-------. 1 boincer umatlas       657 Jan  9 16:37 nr1LDmEzFy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmLllKDmNusm2n.diag
[2026-01-09 19:45:22] -rw-r--r--. 1 boincer umatlas      6906 Jan  9 19:45 init_data.xml
[2026-01-09 19:45:22] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 19:45 boinc_mmap_file
[2026-01-09 19:45:22] -rw-r--r--. 1 boincer umatlas        28 Jan  9 19:45 wrapper_checkpoint.txt
[2026-01-09 19:45:22] -rw-r--r--. 1 boincer umatlas     21217 Jan  9 19:45 stderr.txt
[2026-01-09 19:45:22] HITS file was successfully produced:
[2026-01-09 19:45:22] -rw-------. 1 boincer umatlas 229381302 Jan  9 16:34 shared/HITS.pool.root.1
[2026-01-09 19:45:22]  *** Contents of shared directory: ***
[2026-01-09 19:45:22] total 446332
[2026-01-09 19:45:22] -rw-r--r--. 2 boincer umatlas 223990566 Jan  9 11:14 ATLAS.root_0
[2026-01-09 19:45:22] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 11:14 start_atlas.sh
[2026-01-09 19:45:22] -rw-r--r--. 2 boincer umatlas    592393 Jan  9 11:14 input.tar.gz
[2026-01-09 19:45:22] -rw-------. 1 boincer umatlas 229381302 Jan  9 16:34 HITS.pool.root.1
[2026-01-09 19:45:22] -rw-------. 1 boincer umatlas   3051520 Jan  9 16:37 result.tar.gz
19:45:24 (2395490): run_atlas exited; CPU time 48372.892693
19:45:24 (2395490): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN