Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:53:49 (31239): wrapper (7.7.26015): starting
17:53:49 (31239): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 17:53:49] Arguments: --nthreads 8
[2026-01-09 17:53:49] Threads: 8
[2026-01-09 17:53:49] Checking for CVMFS
[2026-01-09 17:53:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 17:53:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 17:53:49] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 17:53:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 17:53:49] 2.11.2.0 10693 35680 93344 154950 0 57 20000899 25165825 0 130560 0 15508519 99.828 8408540 3334 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 17:53:49] CVMFS is ok
[2026-01-09 17:53:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 17:53:49] Checking for apptainer binary...
[2026-01-09 17:53:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 17:53:49] Running /usr/bin/apptainer --version
[2026-01-09 17:53:49] apptainer version 1.3.2-1.el7
[2026-01-09 17:53:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 17:53:51] cg-vwn439.simple-grid.lan
[2026-01-09 17:53:51] apptainer works
[2026-01-09 17:53:51] Set ATHENA_PROC_NUMBER=8
[2026-01-09 17:53:51] Set ATHENA_CORE_NUMBER=8
[2026-01-09 17:53:51] Starting ATLAS job with PandaID=6963151642
[2026-01-09 17:53:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 20:36:36]  *** The last 200 lines of the pilot log: ***
[2026-01-09 20:36:36] 2026-01-09 19:36:02,796 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 20:36:36] 2026-01-09 19:36:02,798 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 20:36:36] 2026-01-09 19:36:02,800 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6963151642/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 20:36:36] 2026-01-09 19:36:02,800 | INFO     | extracted standard info from prmon json
[2026-01-09 20:36:36] 2026-01-09 19:36:02,801 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 20:36:36] 2026-01-09 19:36:02,801 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 20:36:36] 2026-01-09 19:36:02,801 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 20:36:36] 2026-01-09 19:36:02,801 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 20:36:36] 2026-01-09 19:36:02,805 | INFO     | fitting pss+swap vs Time
[2026-01-09 20:36:36] 2026-01-09 19:36:02,806 | INFO     | sum of square deviations: 1246386160.0
[2026-01-09 20:36:36] 2026-01-09 19:36:02,807 | INFO     | sum of deviations: 734206126.0000038
[2026-01-09 20:36:36] 2026-01-09 19:36:02,807 | INFO     | mean x: 1767982497.0
[2026-01-09 20:36:36] 2026-01-09 19:36:02,807 | INFO     | mean y: 2489779.65408805
[2026-01-09 20:36:36] 2026-01-09 19:36:02,807 | INFO     | intersect: -1038972025.3760508
[2026-01-09 20:36:36] 2026-01-09 19:36:02,808 | INFO     | chi2: 2.357934528199426
[2026-01-09 20:36:36] 2026-01-09 19:36:02,808 | INFO     | sum of square deviations: 1132458442.5
[2026-01-09 20:36:36] 2026-01-09 19:36:02,809 | INFO     | sum of deviations: 11106453122.0
[2026-01-09 20:36:36] 2026-01-09 19:36:02,810 | INFO     | mean x: 1767982344.5
[2026-01-09 20:36:36] 2026-01-09 19:36:02,810 | INFO     | mean y: 2503304.324675325
[2026-01-09 20:36:36] 2026-01-09 19:36:02,810 | INFO     | intersect: -17336775818.682
[2026-01-09 20:36:36] 2026-01-09 19:36:02,810 | INFO     | chi2: 1.5932799778246267
[2026-01-09 20:36:36] 2026-01-09 19:36:02,810 | INFO     | current chi2=1.5932799778246267 (change=32.42899839796262 %)
[2026-01-09 20:36:36] 2026-01-09 19:36:02,811 | INFO     | sum of square deviations: 1025693650.0
[2026-01-09 20:36:36] 2026-01-09 19:36:02,812 | INFO     | sum of deviations: 10746980792.999992
[2026-01-09 20:36:36] 2026-01-09 19:36:02,812 | INFO     | mean x: 1767982192.0
[2026-01-09 20:36:36] 2026-01-09 19:36:02,812 | INFO     | mean y: 2502790.711409396
[2026-01-09 20:36:36] 2026-01-09 19:36:02,812 | INFO     | intersect: -18522005633.21227
[2026-01-09 20:36:36] 2026-01-09 19:36:02,812 | INFO     | chi2: 1.594980134529927
[2026-01-09 20:36:36] 2026-01-09 19:36:02,812 | INFO     | current chi2=1.594980134529927 (change=-0.10670796903012758 %)
[2026-01-09 20:36:36] 2026-01-09 19:36:02,813 | INFO     | right removable region: 148
[2026-01-09 20:36:36] 2026-01-09 19:36:02,813 | INFO     | sum of square deviations: 1132458442.5
[2026-01-09 20:36:36] 2026-01-09 19:36:02,814 | INFO     | sum of deviations: -23047604868.0
[2026-01-09 20:36:36] 2026-01-09 19:36:02,814 | INFO     | mean x: 1767982649.5
[2026-01-09 20:36:36] 2026-01-09 19:36:02,814 | INFO     | mean y: 2521140.4805194805
[2026-01-09 20:36:36] 2026-01-09 19:36:02,814 | INFO     | intersect: 35984208405.93242
[2026-01-09 20:36:36] 2026-01-09 19:36:02,815 | INFO     | chi2: 0.9023903593347639
[2026-01-09 20:36:36] 2026-01-09 19:36:02,815 | INFO     | current chi2=0.9023903593347639 (change=61.729626139202 %)
[2026-01-09 20:36:36] 2026-01-09 19:36:02,815 | INFO     | sum of square deviations: 1025693650.0
[2026-01-09 20:36:36] 2026-01-09 19:36:02,816 | INFO     | sum of deviations: -19884615361.0
[2026-01-09 20:36:36] 2026-01-09 19:36:02,816 | INFO     | mean x: 1767982802.0
[2026-01-09 20:36:36] 2026-01-09 19:36:02,816 | INFO     | mean y: 2516560.4697986576
[2026-01-09 20:36:36] 2026-01-09 19:36:02,817 | INFO     | intersect: 34277524485.72411
[2026-01-09 20:36:36] 2026-01-09 19:36:02,817 | INFO     | chi2: 0.8879920317858337
[2026-01-09 20:36:36] 2026-01-09 19:36:02,817 | INFO     | current chi2=0.8879920317858337 (change=1.5955763932966285 %)
[2026-01-09 20:36:36] 2026-01-09 19:36:02,817 | INFO     | left removable region: 20
[2026-01-09 20:36:36] 2026-01-09 19:36:02,817 | INFO     | sum of square deviations: 650252192.0
[2026-01-09 20:36:36] 2026-01-09 19:36:02,818 | INFO     | sum of deviations: 1523069136.5
[2026-01-09 20:36:36] 2026-01-09 19:36:02,818 | INFO     | mean x: 1767982771.5
[2026-01-09 20:36:36] 2026-01-09 19:36:02,819 | INFO     | mean y: 2512610.4921875
[2026-01-09 20:36:36] 2026-01-09 19:36:02,819 | INFO     | intersect: -4138588375.039564
[2026-01-09 20:36:36] 2026-01-09 19:36:02,819 | INFO     | chi2: 0.00013418463063918017
[2026-01-09 20:36:36] 2026-01-09 19:36:02,819 | INFO     | current memory leak: 2.34 B/s (using 128 data points, chi2=0.00)
[2026-01-09 20:36:36] 2026-01-09 19:36:02,820 | INFO     | could have reported an average CPU frequency of 1999 MHz (8 samples)
[2026-01-09 20:36:36] 2026-01-09 19:36:02,820 | INFO     | ..............................
[2026-01-09 20:36:36] 2026-01-09 19:36:02,820 | INFO     | . Timing measurements:
[2026-01-09 20:36:36] 2026-01-09 19:36:02,820 | INFO     | . get job = 0 s
[2026-01-09 20:36:36] 2026-01-09 19:36:02,820 | INFO     | . initial setup = 1 s
[2026-01-09 20:36:36] 2026-01-09 19:36:02,820 | INFO     | . payload setup = 7 s
[2026-01-09 20:36:36] 2026-01-09 19:36:02,821 | INFO     | . stage-in = 0 s
[2026-01-09 20:36:36] 2026-01-09 19:36:02,821 | INFO     | . payload execution = 9676 s
[2026-01-09 20:36:36] 2026-01-09 19:36:02,821 | INFO     | . stage-out = 1 s
[2026-01-09 20:36:36] 2026-01-09 19:36:02,821 | INFO     | . log creation = 0 s
[2026-01-09 20:36:36] 2026-01-09 19:36:02,821 | INFO     | ..............................
[2026-01-09 20:36:36] 2026-01-09 19:36:02,875 | INFO     | time since job start (9716s) is within the limit (349056.0s)
[2026-01-09 20:36:36] 2026-01-09 19:36:03,265 | INFO     | 
[2026-01-09 20:36:36] 2026-01-09 19:36:03,265 | INFO     | job summary report
[2026-01-09 20:36:36] 2026-01-09 19:36:03,265 | INFO     | --------------------------------------------------
[2026-01-09 20:36:36] 2026-01-09 19:36:03,265 | INFO     | PanDA job id: 6963151642
[2026-01-09 20:36:36] 2026-01-09 19:36:03,266 | INFO     | task id: 47898826
[2026-01-09 20:36:36] 2026-01-09 19:36:03,266 | INFO     | errors: (none)
[2026-01-09 20:36:36] 2026-01-09 19:36:03,266 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 20:36:36] 2026-01-09 19:36:03,266 | INFO     | pilot state: finished 
[2026-01-09 20:36:36] 2026-01-09 19:36:03,266 | INFO     | transexitcode: 0
[2026-01-09 20:36:36] 2026-01-09 19:36:03,266 | INFO     | exeerrorcode: 0
[2026-01-09 20:36:36] 2026-01-09 19:36:03,266 | INFO     | exeerrordiag: 
[2026-01-09 20:36:36] 2026-01-09 19:36:03,266 | INFO     | exitcode: 0
[2026-01-09 20:36:36] 2026-01-09 19:36:03,266 | INFO     | exitmsg: OK
[2026-01-09 20:36:36] 2026-01-09 19:36:03,267 | INFO     | cpuconsumptiontime: 73498 s
[2026-01-09 20:36:36] 2026-01-09 19:36:03,267 | INFO     | nevents: 400
[2026-01-09 20:36:36] 2026-01-09 19:36:03,267 | INFO     | neventsw: 0
[2026-01-09 20:36:36] 2026-01-09 19:36:03,267 | INFO     | pid: 9023
[2026-01-09 20:36:36] 2026-01-09 19:36:03,267 | INFO     | pgrp: 9023
[2026-01-09 20:36:36] 2026-01-09 19:36:03,267 | INFO     | corecount: 8
[2026-01-09 20:36:36] 2026-01-09 19:36:03,267 | INFO     | event service: False
[2026-01-09 20:36:36] 2026-01-09 19:36:03,267 | INFO     | sizes: {0: 2283142, 1: 2283998, 6: 2284260, 12: 2284288, 9687: 2312523, 9688: 2312522, 9689: 2321704, 9692: 2321760, 9700: 2321954}
[2026-01-09 20:36:36] 2026-01-09 19:36:03,267 | INFO     | --------------------------------------------------
[2026-01-09 20:36:36] 2026-01-09 19:36:03,267 | INFO     | 
[2026-01-09 20:36:36] 2026-01-09 19:36:03,268 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-01-09 20:36:36] 2026-01-09 19:36:03,296 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 20:36:36] 2026-01-09 19:36:03,296 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 20:36:36] 2026-01-09 19:36:03,296 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 20:36:36] 2026-01-09 19:36:03,296 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 20:36:36] 2026-01-09 19:36:03,296 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 20:36:36] 2026-01-09 19:36:03,296 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 20:36:36] 2026-01-09 19:36:03,297 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 20:36:36] 2026-01-09 19:36:03,297 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 20:36:36] 2026-01-09 19:36:03,297 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 20:36:36] 2026-01-09 19:36:03,297 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 20:36:36] 2026-01-09 19:36:03,297 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 20:36:36] 2026-01-09 19:36:03,297 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 20:36:36] 2026-01-09 19:36:03,297 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 20:36:36] 2026-01-09 19:36:03,297 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 20:36:36] 2026-01-09 19:36:03,297 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 20:36:36] 2026-01-09 19:36:03,298 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 20:36:36] 2026-01-09 19:36:03,298 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 20:36:36] 2026-01-09 19:36:03,298 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 20:36:36] 2026-01-09 19:36:03,298 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 20:36:36] 2026-01-09 19:36:03,298 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 20:36:36] 2026-01-09 19:36:03,298 | INFO     | job 6963151642 has completed (purged errors)
[2026-01-09 20:36:36] 2026-01-09 19:36:03,299 | INFO     | overall cleanup function is called
[2026-01-09 20:36:36] 2026-01-09 19:36:04,307 | INFO     | --- collectZombieJob: --- 10, [9023]
[2026-01-09 20:36:36] 2026-01-09 19:36:04,307 | INFO     | zombie collector waiting for pid 9023
[2026-01-09 20:36:36] 2026-01-09 19:36:04,307 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 20:36:36] 2026-01-09 19:36:04,307 | INFO     | collected zombie processes
[2026-01-09 20:36:36] 2026-01-09 19:36:04,307 | INFO     | will attempt to kill all subprocesses of pid=9023
[2026-01-09 20:36:36] 2026-01-09 19:36:04,376 | INFO     | process IDs to be killed: [9023] (in reverse order)
[2026-01-09 20:36:36] 2026-01-09 19:36:04,425 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 20:36:36] 2026-01-09 19:36:04,425 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 20:36:36] 2026-01-09 19:36:04,427 | INFO     | did not find any defunct processes belonging to 9023
[2026-01-09 20:36:36] 2026-01-09 19:36:04,429 | INFO     | did not find any defunct processes belonging to 9023
[2026-01-09 20:36:36] 2026-01-09 19:36:04,429 | INFO     | ready for new job
[2026-01-09 20:36:36] 2026-01-09 19:36:04,429 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 20:36:36] 2026-01-09 19:36:04,431 | INFO     | ***************************************
[2026-01-09 20:36:36] 2026-01-09 19:36:04,431 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 20:36:36] 2026-01-09 19:36:04,431 | INFO     | ***************************************
[2026-01-09 20:36:36] 2026-01-09 19:36:04,431 | INFO     | 
[2026-01-09 20:36:36] 2026-01-09 19:36:04,432 | INFO     | pilot is running in a VM
[2026-01-09 20:36:36] 2026-01-09 19:36:04,432 | INFO     | architecture information:
[2026-01-09 20:36:36] 2026-01-09 19:36:04,433 | INFO     | executing command: cat /etc/os-release
[2026-01-09 20:36:36] 2026-01-09 19:36:04,456 | INFO     | cat /etc/os-release:
[2026-01-09 20:36:36] NAME="CentOS Linux"
[2026-01-09 20:36:36] VERSION="7 (Core)"
[2026-01-09 20:36:36] ID="centos"
[2026-01-09 20:36:36] ID_LIKE="rhel fedora"
[2026-01-09 20:36:36] VERSION_ID="7"
[2026-01-09 20:36:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 20:36:36] ANSI_COLOR="0;31"
[2026-01-09 20:36:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 20:36:36] HOME_URL="https://www.centos.org/"
[2026-01-09 20:36:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 20:36:36] 
[2026-01-09 20:36:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 20:36:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 20:36:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 20:36:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 20:36:36] 
[2026-01-09 20:36:36] 2026-01-09 19:36:04,456 | INFO     | ***************************************
[2026-01-09 20:36:36] 2026-01-09 19:36:04,960 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-01-09 20:36:36] 2026-01-09 19:36:04,992 | INFO     | sufficient remaining disk space (498123931648 B)
[2026-01-09 20:36:36] 2026-01-09 19:36:04,992 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 20:36:36] 2026-01-09 19:36:04,993 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 20:36:36] 2026-01-09 19:36:04,993 | INFO     | update_server=False
[2026-01-09 20:36:36] 2026-01-09 19:36:04,993 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 20:36:36] 2026-01-09 19:36:04,993 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 20:36:36] 2026-01-09 19:36:05,418 | INFO     | all data control threads have been joined
[2026-01-09 20:36:36] 2026-01-09 19:36:05,599 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 20:36:36] 2026-01-09 19:36:05,699 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 20:36:36] 2026-01-09 19:36:05,699 | INFO     | aborting loop
[2026-01-09 20:36:36] 2026-01-09 19:36:05,851 | INFO     | all payload control threads have been joined
[2026-01-09 20:36:36] 2026-01-09 19:36:05,999 | INFO     | [job] retrieve thread has finished
[2026-01-09 20:36:36] 2026-01-09 19:36:06,164 | INFO     | [job] validate thread has finished
[2026-01-09 20:36:36] 2026-01-09 19:36:06,261 | INFO     | all job control threads have been joined
[2026-01-09 20:36:36] 2026-01-09 19:36:06,262 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 20:36:36] 2026-01-09 19:36:06,340 | INFO     | [payload] failed_post thread has finished
[2026-01-09 20:36:36] 2026-01-09 19:36:06,386 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 20:36:36] 2026-01-09 19:36:06,424 | INFO     | [data] control thread has finished
[2026-01-09 20:36:36] 2026-01-09 19:36:06,549 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 20:36:36] 2026-01-09 19:36:06,692 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 20:36:36] 2026-01-09 19:36:06,705 | INFO     | [job] job monitor thread has finished
[2026-01-09 20:36:36] 2026-01-09 19:36:06,857 | INFO     | [payload] control thread has finished
[2026-01-09 20:36:36] 2026-01-09 19:36:07,000 | INFO     | [data] copytool_out thread has finished
[2026-01-09 20:36:36] 2026-01-09 19:36:07,126 | INFO     | [data] copytool_in thread has finished
[2026-01-09 20:36:36] 2026-01-09 19:36:07,266 | INFO     | [job] control thread has finished
[2026-01-09 20:36:36] 2026-01-09 19:36:07,547 | INFO     | [payload] validate_post thread has finished
[2026-01-09 20:36:36] 2026-01-09 19:36:07,956 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 20:36:36] 2026-01-09 19:36:08,963 | INFO     | [job] queue monitor thread has finished
[2026-01-09 20:36:36] 2026-01-09 19:36:09,605 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 20:36:36] 2026-01-09 19:36:21,929 | INFO     | [monitor] cgroup control has ended
[2026-01-09 20:36:36] 2026-01-09 19:36:23,933 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140143976736576)>', '<ExcThread(monitor, started 140143667160832)>']
[2026-01-09 20:36:36] 2026-01-09 19:36:28,959 | INFO     | all workflow threads have been joined
[2026-01-09 20:36:36] 2026-01-09 19:36:28,959 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 20:36:36] 2026-01-09 19:36:28,960 | INFO     | traces error code: 0
[2026-01-09 20:36:36] 2026-01-09 19:36:28,960 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 20:36:36] 2026-01-09 19:36:35,971 | INFO     | PID=2572 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 20:36:36] 2026-01-09 19:36:35,972 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 20:36:36] 2026-01-09 19:36:35,972 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 20:36:36] 2026-01-09 19:36:35,973 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 20:36:36] 2026-01-09 19:36:35,973 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 20:36:36] 2026-01-09 19:36:35,973 | CRITICAL | thread 'MainThread' is not alive
[2026-01-09 20:36:36] 2026-01-09 19:36:35,973 | INFO     | [monitor] control thread has ended
[2026-01-09 20:36:36] 2026-01-09 19:36:36,133 [wrapper] ==== pilot stdout END ====
[2026-01-09 20:36:36] 2026-01-09 19:36:36,138 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 20:36:36] 2026-01-09 19:36:36,146 [wrapper] pilotpid: 2572
[2026-01-09 20:36:36] 2026-01-09 19:36:36,152 [wrapper] Pilot exit status: 0
[2026-01-09 20:36:36] 2026-01-09 19:36:36,178 [wrapper] pandaids: 6963151642
[2026-01-09 20:36:36] 2026-01-09 19:36:36,220 [wrapper] cleanup supervisor_pilot 25827 2573
[2026-01-09 20:36:36] 2026-01-09 19:36:36,229 [wrapper] Test setup, not cleaning
[2026-01-09 20:36:36] 2026-01-09 19:36:36,236 [wrapper] apfmon messages muted
[2026-01-09 20:36:36] 2026-01-09 19:36:36,246 [wrapper] ==== wrapper stdout END ====
[2026-01-09 20:36:36] 2026-01-09 19:36:36,252 [wrapper] ==== wrapper stderr END ====
[2026-01-09 20:36:36]  *** Error codes and diagnostics ***
[2026-01-09 20:36:36]     "exeErrorCode": 0,
[2026-01-09 20:36:36]     "exeErrorDiag": "",
[2026-01-09 20:36:36]     "pilotErrorCode": 0,
[2026-01-09 20:36:36]     "pilotErrorDiag": "",
[2026-01-09 20:36:36]  *** Listing of results directory ***
[2026-01-09 20:36:36] total 443940
[2026-01-09 20:36:36] -rw-r--r--. 1 boinc boinc    579449 Jan  8 17:02 pilot3.tar.gz
[2026-01-09 20:36:36] -rwx------. 1 boinc boinc     36322 Jan  8 17:03 runpilot2-wrapper.sh
[2026-01-09 20:36:36] -rw-r--r--. 1 boinc boinc      5112 Jan  8 17:04 queuedata.json
[2026-01-09 20:36:36] -rw-r--r--. 1 boinc boinc       100 Jan  9 17:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 20:36:36] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 17:53 run_atlas
[2026-01-09 20:36:36] -rw-r--r--. 1 boinc boinc       105 Jan  9 17:53 job.xml
[2026-01-09 20:36:36] -rw-r--r--. 1 boinc boinc      6391 Jan  9 17:53 init_data.xml
[2026-01-09 20:36:36] -rw-r--r--. 2 boinc boinc 226455650 Jan  9 17:53 EVNT.47898824._001123.pool.root.1
[2026-01-09 20:36:36] -rw-r--r--. 2 boinc boinc     15847 Jan  9 17:53 start_atlas.sh
[2026-01-09 20:36:36] drwxrwx--x. 2 boinc boinc        68 Jan  9 17:53 shared
[2026-01-09 20:36:36] -rw-r--r--. 2 boinc boinc    592397 Jan  9 17:53 input.tar.gz
[2026-01-09 20:36:36] -rw-r--r--. 1 boinc boinc         0 Jan  9 17:53 boinc_lockfile
[2026-01-09 20:36:36] -rw-r--r--. 1 boinc boinc      2519 Jan  9 17:53 pandaJob.out
[2026-01-09 20:36:36] -rw-------. 1 boinc boinc    989356 Jan  9 17:54 agis_schedconf.cvmfs.json
[2026-01-09 20:36:36] -rw-------. 1 boinc boinc   1516240 Jan  9 17:54 agis_ddmendpoints.agis.ALL.json
[2026-01-09 20:36:36] drwx------. 5 boinc boinc      4096 Jan  9 17:54 pilot3
[2026-01-09 20:36:36] -rw-------. 1 boinc boinc 220879699 Jan  9 20:35 HITS.47898826._028680.pool.root.1
[2026-01-09 20:36:36] -rw-r--r--. 1 boinc boinc       530 Jan  9 20:35 boinc_task_state.xml
[2026-01-09 20:36:36] -rw-------. 1 boinc boinc      1014 Jan  9 20:35 memory_monitor_summary.json
[2026-01-09 20:36:36] -rw-------. 1 boinc boinc    384722 Jan  9 20:35 log.47898826._028680.job.log.tgz.1
[2026-01-09 20:36:36] -rw-------. 1 boinc boinc      7766 Jan  9 20:36 heartbeat.json
[2026-01-09 20:36:36] -rw-r--r--. 1 boinc boinc        27 Jan  9 20:36 wrapper_checkpoint.txt
[2026-01-09 20:36:36] -rw-r--r--. 1 boinc boinc      8192 Jan  9 20:36 boinc_mmap_file
[2026-01-09 20:36:36] -rw-------. 1 boinc boinc        95 Jan  9 20:36 pilot_heartbeat.json
[2026-01-09 20:36:36] -rw-------. 1 boinc boinc       814 Jan  9 20:36 pilotlog.txt
[2026-01-09 20:36:36] -rw-------. 1 boinc boinc   1300934 Jan  9 20:36 log.47898826._028680.job.log.1
[2026-01-09 20:36:36] -rw-------. 1 boinc boinc       357 Jan  9 20:36 output.list
[2026-01-09 20:36:36] -rw-r--r--. 1 boinc boinc       620 Jan  9 20:36 runtime_log
[2026-01-09 20:36:36] -rw-------. 1 boinc boinc   1699840 Jan  9 20:36 result.tar.gz
[2026-01-09 20:36:36] -rw-------. 1 boinc boinc       652 Jan  9 20:36 XFDODmSf7x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmmvkKDmwJVubm.diag
[2026-01-09 20:36:36] -rw-r--r--. 1 boinc boinc      8816 Jan  9 20:36 runtime_log.err
[2026-01-09 20:36:36] -rw-r--r--. 1 boinc boinc     20703 Jan  9 20:36 stderr.txt
[2026-01-09 20:36:36] HITS file was successfully produced:
[2026-01-09 20:36:36] -rw-------. 1 boinc boinc 220879699 Jan  9 20:35 shared/HITS.pool.root.1
[2026-01-09 20:36:36]  *** Contents of shared directory: ***
[2026-01-09 20:36:36] total 439112
[2026-01-09 20:36:36] -rw-r--r--. 2 boinc boinc 226455650 Jan  9 17:53 ATLAS.root_0
[2026-01-09 20:36:36] -rw-r--r--. 2 boinc boinc     15847 Jan  9 17:53 start_atlas.sh
[2026-01-09 20:36:36] -rw-r--r--. 2 boinc boinc    592397 Jan  9 17:53 input.tar.gz
[2026-01-09 20:36:36] -rw-------. 1 boinc boinc 220879699 Jan  9 20:35 HITS.pool.root.1
[2026-01-09 20:36:36] -rw-------. 1 boinc boinc   1699840 Jan  9 20:36 result.tar.gz
20:36:37 (31239): run_atlas exited; CPU time 73564.344935
20:36:37 (31239): called boinc_finish(0)

</stderr_txt>
]]>

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