Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:02:34 (11713): wrapper (7.7.26015): starting
18:02:34 (11713): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 18:02:34] Arguments: --nthreads 8
[2026-01-09 18:02:34] Threads: 8
[2026-01-09 18:02:34] Checking for CVMFS
[2026-01-09 18:02:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 18:02:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 18:02:34] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 18:02:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 18:02:34] 2.11.2.0 25330 35667 121468 154950 1 57 16041148 25165824 0 130560 0 16372323 99.797 10805592 3514 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 18:02:34] CVMFS is ok
[2026-01-09 18:02:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 18:02:34] Checking for apptainer binary...
[2026-01-09 18:02:34] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 18:02:34] Running /usr/bin/apptainer --version
[2026-01-09 18:02:34] apptainer version 1.3.2-1.el7
[2026-01-09 18:02:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 18:02:36] cg-vwn437.simple-grid.lan
[2026-01-09 18:02:36] apptainer works
[2026-01-09 18:02:36] Set ATHENA_PROC_NUMBER=8
[2026-01-09 18:02:36] Set ATHENA_CORE_NUMBER=8
[2026-01-09 18:02:36] Starting ATLAS job with PandaID=6963165925
[2026-01-09 18:02:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 20:44:22]  *** The last 200 lines of the pilot log: ***
[2026-01-09 20:44:22] 2026-01-09 19:43:49,859 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 20:44:22] 2026-01-09 19:43:49,860 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 20:44:22] 2026-01-09 19:43:49,862 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-6963165925/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 20:44:22] 2026-01-09 19:43:49,863 | INFO     | extracted standard info from prmon json
[2026-01-09 20:44:22] 2026-01-09 19:43:49,863 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 20:44:22] 2026-01-09 19:43:49,863 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 20:44:22] 2026-01-09 19:43:49,864 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 20:44:22] 2026-01-09 19:43:49,864 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 20:44:22] 2026-01-09 19:43:49,867 | INFO     | fitting pss+swap vs Time
[2026-01-09 20:44:22] 2026-01-09 19:43:49,868 | INFO     | sum of square deviations: 1223016419.5
[2026-01-09 20:44:22] 2026-01-09 19:43:49,869 | INFO     | sum of deviations: 17872311096.5
[2026-01-09 20:44:22] 2026-01-09 19:43:49,869 | INFO     | mean x: 1767982992.5
[2026-01-09 20:44:22] 2026-01-09 19:43:49,869 | INFO     | mean y: 2453542.6518987343
[2026-01-09 20:44:22] 2026-01-09 19:43:49,869 | INFO     | intersect: -25833619915.95225
[2026-01-09 20:44:22] 2026-01-09 19:43:49,870 | INFO     | chi2: 2.2983765840010637
[2026-01-09 20:44:22] 2026-01-09 19:43:49,870 | INFO     | sum of square deviations: 1110539892.0
[2026-01-09 20:44:22] 2026-01-09 19:43:49,871 | INFO     | sum of deviations: 27981412541.000008
[2026-01-09 20:44:22] 2026-01-09 19:43:49,871 | INFO     | mean x: 1767982840.0
[2026-01-09 20:44:22] 2026-01-09 19:43:49,871 | INFO     | mean y: 2466862.4967320263
[2026-01-09 20:44:22] 2026-01-09 19:43:49,871 | INFO     | intersect: -44544025854.98307
[2026-01-09 20:44:22] 2026-01-09 19:43:49,872 | INFO     | chi2: 1.426002753186284
[2026-01-09 20:44:22] 2026-01-09 19:43:49,872 | INFO     | current chi2=1.426002753186284 (change=37.95608765279589 %)
[2026-01-09 20:44:22] 2026-01-09 19:43:49,872 | INFO     | sum of square deviations: 1005179777.0
[2026-01-09 20:44:22] 2026-01-09 19:43:49,873 | INFO     | sum of deviations: 26786644825.000004
[2026-01-09 20:44:22] 2026-01-09 19:43:49,873 | INFO     | mean x: 1767982687.5
[2026-01-09 20:44:22] 2026-01-09 19:43:49,874 | INFO     | mean y: 2465132.756756757
[2026-01-09 20:44:22] 2026-01-09 19:43:49,874 | INFO     | intersect: -47111817695.48947
[2026-01-09 20:44:22] 2026-01-09 19:43:49,874 | INFO     | chi2: 1.4269626258921255
[2026-01-09 20:44:22] 2026-01-09 19:43:49,874 | INFO     | current chi2=1.4269626258921255 (change=-0.06731212150164292 %)
[2026-01-09 20:44:22] 2026-01-09 19:43:49,874 | INFO     | right removable region: 147
[2026-01-09 20:44:22] 2026-01-09 19:43:49,875 | INFO     | sum of square deviations: 1110539892.0
[2026-01-09 20:44:22] 2026-01-09 19:43:49,876 | INFO     | sum of deviations: -4847555930.000001
[2026-01-09 20:44:22] 2026-01-09 19:43:49,876 | INFO     | mean x: 1767983145.0
[2026-01-09 20:44:22] 2026-01-09 19:43:49,876 | INFO     | mean y: 2483867.4379084967
[2026-01-09 20:44:22] 2026-01-09 19:43:49,876 | INFO     | intersect: 7719808783.385008
[2026-01-09 20:44:22] 2026-01-09 19:43:49,876 | INFO     | chi2: 0.9125015384299386
[2026-01-09 20:44:22] 2026-01-09 19:43:49,877 | INFO     | current chi2=0.9125015384299386 (change=60.29799708273062 %)
[2026-01-09 20:44:22] 2026-01-09 19:43:49,877 | INFO     | sum of square deviations: 1005179777.0
[2026-01-09 20:44:22] 2026-01-09 19:43:49,878 | INFO     | sum of deviations: -5161261544.999995
[2026-01-09 20:44:22] 2026-01-09 19:43:49,878 | INFO     | mean x: 1767983297.5
[2026-01-09 20:44:22] 2026-01-09 19:43:49,878 | INFO     | mean y: 2484301.0675675673
[2026-01-09 20:44:22] 2026-01-09 19:43:49,878 | INFO     | intersect: 9080486479.765434
[2026-01-09 20:44:22] 2026-01-09 19:43:49,879 | INFO     | chi2: 0.9036204188647309
[2026-01-09 20:44:22] 2026-01-09 19:43:49,879 | INFO     | current chi2=0.9036204188647309 (change=0.9732717361209852 %)
[2026-01-09 20:44:22] 2026-01-09 19:43:49,879 | INFO     | left removable region: 20
[2026-01-09 20:44:22] 2026-01-09 19:43:49,879 | INFO     | sum of square deviations: 635130048.0
[2026-01-09 20:44:22] 2026-01-09 19:43:49,880 | INFO     | sum of deviations: 2539646306.000001
[2026-01-09 20:44:22] 2026-01-09 19:43:49,880 | INFO     | mean x: 1767983267.0
[2026-01-09 20:44:22] 2026-01-09 19:43:49,880 | INFO     | mean y: 2502554.590551181
[2026-01-09 20:44:22] 2026-01-09 19:43:49,880 | INFO     | intersect: -7066997915.817618
[2026-01-09 20:44:22] 2026-01-09 19:43:49,881 | INFO     | chi2: 0.0005233441937079061
[2026-01-09 20:44:22] 2026-01-09 19:43:49,881 | INFO     | current memory leak: 4.00 B/s (using 127 data points, chi2=0.00)
[2026-01-09 20:44:22] 2026-01-09 19:43:49,881 | INFO     | could have reported an average CPU frequency of 1999 MHz (8 samples)
[2026-01-09 20:44:22] 2026-01-09 19:43:49,882 | INFO     | ..............................
[2026-01-09 20:44:22] 2026-01-09 19:43:49,882 | INFO     | . Timing measurements:
[2026-01-09 20:44:22] 2026-01-09 19:43:49,882 | INFO     | . get job = 0 s
[2026-01-09 20:44:22] 2026-01-09 19:43:49,882 | INFO     | . initial setup = 2 s
[2026-01-09 20:44:22] 2026-01-09 19:43:49,882 | INFO     | . payload setup = 7 s
[2026-01-09 20:44:22] 2026-01-09 19:43:49,882 | INFO     | . stage-in = 0 s
[2026-01-09 20:44:22] 2026-01-09 19:43:49,882 | INFO     | . payload execution = 9620 s
[2026-01-09 20:44:22] 2026-01-09 19:43:49,882 | INFO     | . stage-out = 1 s
[2026-01-09 20:44:22] 2026-01-09 19:43:49,882 | INFO     | . log creation = 0 s
[2026-01-09 20:44:22] 2026-01-09 19:43:49,883 | INFO     | ..............................
[2026-01-09 20:44:22] 2026-01-09 19:43:49,995 | INFO     | 
[2026-01-09 20:44:22] 2026-01-09 19:43:49,996 | INFO     | job summary report
[2026-01-09 20:44:22] 2026-01-09 19:43:49,996 | INFO     | --------------------------------------------------
[2026-01-09 20:44:22] 2026-01-09 19:43:49,996 | INFO     | PanDA job id: 6963165925
[2026-01-09 20:44:22] 2026-01-09 19:43:49,996 | INFO     | task id: 47898826
[2026-01-09 20:44:22] 2026-01-09 19:43:49,996 | INFO     | errors: (none)
[2026-01-09 20:44:22] 2026-01-09 19:43:49,996 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 20:44:22] 2026-01-09 19:43:49,996 | INFO     | pilot state: finished 
[2026-01-09 20:44:22] 2026-01-09 19:43:49,996 | INFO     | transexitcode: 0
[2026-01-09 20:44:22] 2026-01-09 19:43:49,997 | INFO     | exeerrorcode: 0
[2026-01-09 20:44:22] 2026-01-09 19:43:49,997 | INFO     | exeerrordiag: 
[2026-01-09 20:44:22] 2026-01-09 19:43:49,997 | INFO     | exitcode: 0
[2026-01-09 20:44:22] 2026-01-09 19:43:49,997 | INFO     | exitmsg: OK
[2026-01-09 20:44:22] 2026-01-09 19:43:49,997 | INFO     | cpuconsumptiontime: 72313 s
[2026-01-09 20:44:22] 2026-01-09 19:43:49,997 | INFO     | nevents: 400
[2026-01-09 20:44:22] 2026-01-09 19:43:49,997 | INFO     | neventsw: 0
[2026-01-09 20:44:22] 2026-01-09 19:43:49,997 | INFO     | pid: 21887
[2026-01-09 20:44:22] 2026-01-09 19:43:49,997 | INFO     | pgrp: 21887
[2026-01-09 20:44:22] 2026-01-09 19:43:49,997 | INFO     | corecount: 8
[2026-01-09 20:44:22] 2026-01-09 19:43:49,998 | INFO     | event service: False
[2026-01-09 20:44:22] 2026-01-09 19:43:49,998 | INFO     | sizes: {0: 2283800, 1: 2283999, 6: 2284261, 11: 2284289, 9632: 2312533, 9633: 2312532, 9634: 2321770, 9642: 2321908}
[2026-01-09 20:44:22] 2026-01-09 19:43:49,998 | INFO     | --------------------------------------------------
[2026-01-09 20:44:22] 2026-01-09 19:43:49,998 | INFO     | 
[2026-01-09 20:44:22] 2026-01-09 19:43:49,998 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2026-01-09 20:44:22] 2026-01-09 19:43:50,025 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 20:44:22] 2026-01-09 19:43:50,025 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 20:44:22] 2026-01-09 19:43:50,025 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 20:44:22] 2026-01-09 19:43:50,026 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 20:44:22] 2026-01-09 19:43:50,026 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 20:44:22] 2026-01-09 19:43:50,026 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 20:44:22] 2026-01-09 19:43:50,026 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 20:44:22] 2026-01-09 19:43:50,026 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 20:44:22] 2026-01-09 19:43:50,026 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 20:44:22] 2026-01-09 19:43:50,026 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 20:44:22] 2026-01-09 19:43:50,026 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 20:44:22] 2026-01-09 19:43:50,027 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 20:44:22] 2026-01-09 19:43:50,027 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 20:44:22] 2026-01-09 19:43:50,027 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 20:44:22] 2026-01-09 19:43:50,027 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 20:44:22] 2026-01-09 19:43:50,027 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 20:44:22] 2026-01-09 19:43:50,027 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 20:44:22] 2026-01-09 19:43:50,027 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 20:44:22] 2026-01-09 19:43:50,027 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 20:44:22] 2026-01-09 19:43:50,027 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 20:44:22] 2026-01-09 19:43:50,028 | INFO     | job 6963165925 has completed (purged errors)
[2026-01-09 20:44:22] 2026-01-09 19:43:50,028 | INFO     | overall cleanup function is called
[2026-01-09 20:44:22] 2026-01-09 19:43:51,036 | INFO     | --- collectZombieJob: --- 10, [21887]
[2026-01-09 20:44:22] 2026-01-09 19:43:51,036 | INFO     | zombie collector waiting for pid 21887
[2026-01-09 20:44:22] 2026-01-09 19:43:51,037 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 20:44:22] 2026-01-09 19:43:51,037 | INFO     | collected zombie processes
[2026-01-09 20:44:22] 2026-01-09 19:43:51,037 | INFO     | will attempt to kill all subprocesses of pid=21887
[2026-01-09 20:44:22] 2026-01-09 19:43:51,101 | INFO     | process IDs to be killed: [21887] (in reverse order)
[2026-01-09 20:44:22] 2026-01-09 19:43:51,149 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 20:44:22] 2026-01-09 19:43:51,150 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 20:44:22] 2026-01-09 19:43:51,151 | INFO     | did not find any defunct processes belonging to 21887
[2026-01-09 20:44:22] 2026-01-09 19:43:51,153 | INFO     | did not find any defunct processes belonging to 21887
[2026-01-09 20:44:22] 2026-01-09 19:43:51,153 | INFO     | ready for new job
[2026-01-09 20:44:22] 2026-01-09 19:43:51,153 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 20:44:22] 2026-01-09 19:43:51,155 | INFO     | ***************************************
[2026-01-09 20:44:22] 2026-01-09 19:43:51,155 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 20:44:22] 2026-01-09 19:43:51,155 | INFO     | ***************************************
[2026-01-09 20:44:22] 2026-01-09 19:43:51,156 | INFO     | 
[2026-01-09 20:44:22] 2026-01-09 19:43:51,156 | INFO     | pilot is running in a VM
[2026-01-09 20:44:22] 2026-01-09 19:43:51,156 | INFO     | architecture information:
[2026-01-09 20:44:22] 2026-01-09 19:43:51,157 | INFO     | executing command: cat /etc/os-release
[2026-01-09 20:44:22] 2026-01-09 19:43:51,175 | INFO     | cat /etc/os-release:
[2026-01-09 20:44:22] NAME="CentOS Linux"
[2026-01-09 20:44:22] VERSION="7 (Core)"
[2026-01-09 20:44:22] ID="centos"
[2026-01-09 20:44:22] ID_LIKE="rhel fedora"
[2026-01-09 20:44:22] VERSION_ID="7"
[2026-01-09 20:44:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 20:44:22] ANSI_COLOR="0;31"
[2026-01-09 20:44:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 20:44:22] HOME_URL="https://www.centos.org/"
[2026-01-09 20:44:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 20:44:22] 
[2026-01-09 20:44:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 20:44:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 20:44:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 20:44:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 20:44:22] 
[2026-01-09 20:44:22] 2026-01-09 19:43:51,176 | INFO     | ***************************************
[2026-01-09 20:44:22] 2026-01-09 19:43:51,679 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2026-01-09 20:44:22] 2026-01-09 19:43:51,699 | INFO     | sufficient remaining disk space (498142806016 B)
[2026-01-09 20:44:22] 2026-01-09 19:43:51,700 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 20:44:22] 2026-01-09 19:43:51,700 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 20:44:22] 2026-01-09 19:43:51,700 | INFO     | update_server=False
[2026-01-09 20:44:22] 2026-01-09 19:43:51,700 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 20:44:22] 2026-01-09 19:43:51,701 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 20:44:22] 2026-01-09 19:43:51,701 | INFO     | aborting loop
[2026-01-09 20:44:22] 2026-01-09 19:43:51,701 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 20:44:22] 2026-01-09 19:43:52,144 | INFO     | all payload control threads have been joined
[2026-01-09 20:44:22] 2026-01-09 19:43:52,322 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 20:44:22] 2026-01-09 19:43:52,436 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 20:44:22] 2026-01-09 19:43:52,538 | INFO     | all data control threads have been joined
[2026-01-09 20:44:22] 2026-01-09 19:43:52,706 | INFO     | [job] retrieve thread has finished
[2026-01-09 20:44:22] 2026-01-09 19:43:52,707 | INFO     | [job] job monitor thread has finished
[2026-01-09 20:44:22] 2026-01-09 19:43:52,708 | INFO     | [job] queue monitor thread has finished
[2026-01-09 20:44:22] 2026-01-09 19:43:52,848 | INFO     | all job control threads have been joined
[2026-01-09 20:44:22] 2026-01-09 19:43:52,885 | INFO     | [payload] validate_post thread has finished
[2026-01-09 20:44:22] 2026-01-09 19:43:53,077 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 20:44:22] 2026-01-09 19:43:53,138 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 20:44:22] 2026-01-09 19:43:53,148 | INFO     | [payload] control thread has finished
[2026-01-09 20:44:22] 2026-01-09 19:43:53,323 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 20:44:22] 2026-01-09 19:43:53,543 | INFO     | [data] control thread has finished
[2026-01-09 20:44:22] 2026-01-09 19:43:53,568 | INFO     | [data] copytool_in thread has finished
[2026-01-09 20:44:22] 2026-01-09 19:43:53,775 | INFO     | [payload] failed_post thread has finished
[2026-01-09 20:44:22] 2026-01-09 19:43:53,794 | INFO     | [job] validate thread has finished
[2026-01-09 20:44:22] 2026-01-09 19:43:53,854 | INFO     | [job] control thread has finished
[2026-01-09 20:44:22] 2026-01-09 19:43:54,327 | INFO     | [data] copytool_out thread has finished
[2026-01-09 20:44:22] 2026-01-09 19:43:56,443 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 20:44:22] 2026-01-09 19:44:02,049 | INFO     | job.realtimelogging is not enabled
[2026-01-09 20:44:22] 2026-01-09 19:44:03,055 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 20:44:22] 2026-01-09 19:44:07,226 | INFO     | [monitor] cgroup control has ended
[2026-01-09 20:44:22] 2026-01-09 19:44:07,462 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139782202627904)>', '<ExcThread(monitor, started 139781606446848)>']
[2026-01-09 20:44:22] 2026-01-09 19:44:12,489 | INFO     | all workflow threads have been joined
[2026-01-09 20:44:22] 2026-01-09 19:44:12,489 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 20:44:22] 2026-01-09 19:44:12,489 | INFO     | traces error code: 0
[2026-01-09 20:44:22] 2026-01-09 19:44:12,490 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 20:44:22] 2026-01-09 19:44:22,097 | INFO     | PID=15440 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 20:44:22] 2026-01-09 19:44:22,099 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 20:44:22] 2026-01-09 19:44:22,099 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 20:44:22] 2026-01-09 19:44:22,099 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 20:44:22] 2026-01-09 19:44:22,099 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 20:44:22] 2026-01-09 19:44:22,099 | CRITICAL | thread 'MainThread' is not alive
[2026-01-09 20:44:22] 2026-01-09 19:44:22,099 | INFO     | [monitor] control thread has ended
[2026-01-09 20:44:22] 2026-01-09 19:44:22,233 [wrapper] ==== pilot stdout END ====
[2026-01-09 20:44:22] 2026-01-09 19:44:22,237 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 20:44:22] 2026-01-09 19:44:22,241 [wrapper] pilotpid: 15440
[2026-01-09 20:44:22] 2026-01-09 19:44:22,245 [wrapper] Pilot exit status: 0
[2026-01-09 20:44:22] 2026-01-09 19:44:22,266 [wrapper] pandaids: 6963165925
[2026-01-09 20:44:22] 2026-01-09 19:44:22,300 [wrapper] cleanup supervisor_pilot  6286 15441
[2026-01-09 20:44:22] 2026-01-09 19:44:22,309 [wrapper] Test setup, not cleaning
[2026-01-09 20:44:22] 2026-01-09 19:44:22,313 [wrapper] apfmon messages muted
[2026-01-09 20:44:22] 2026-01-09 19:44:22,317 [wrapper] ==== wrapper stdout END ====
[2026-01-09 20:44:22] 2026-01-09 19:44:22,321 [wrapper] ==== wrapper stderr END ====
[2026-01-09 20:44:22]  *** Error codes and diagnostics ***
[2026-01-09 20:44:22]     "exeErrorCode": 0,
[2026-01-09 20:44:22]     "exeErrorDiag": "",
[2026-01-09 20:44:22]     "pilotErrorCode": 0,
[2026-01-09 20:44:22]     "pilotErrorDiag": "",
[2026-01-09 20:44:22]  *** Listing of results directory ***
[2026-01-09 20:44:22] total 431188
[2026-01-09 20:44:22] -rwx------. 1 boinc boinc     36322 Jan  9 01:56 runpilot2-wrapper.sh
[2026-01-09 20:44:22] -rw-r--r--. 1 boinc boinc    579449 Jan  9 01:57 pilot3.tar.gz
[2026-01-09 20:44:22] -rw-r--r--. 1 boinc boinc      5112 Jan  9 01:57 queuedata.json
[2026-01-09 20:44:22] -rw-r--r--. 1 boinc boinc       100 Jan  9 18:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 20:44:22] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 18:02 run_atlas
[2026-01-09 20:44:22] -rw-r--r--. 1 boinc boinc       105 Jan  9 18:02 job.xml
[2026-01-09 20:44:22] -rw-r--r--. 1 boinc boinc      6390 Jan  9 18:02 init_data.xml
[2026-01-09 20:44:22] -rw-r--r--. 2 boinc boinc 224053226 Jan  9 18:02 EVNT.47898824._001357.pool.root.1
[2026-01-09 20:44:22] -rw-r--r--. 2 boinc boinc     15847 Jan  9 18:02 start_atlas.sh
[2026-01-09 20:44:22] drwxrwx--x. 2 boinc boinc        68 Jan  9 18:02 shared
[2026-01-09 20:44:22] -rw-r--r--. 2 boinc boinc    592396 Jan  9 18:02 input.tar.gz
[2026-01-09 20:44:22] -rw-r--r--. 1 boinc boinc         0 Jan  9 18:02 boinc_lockfile
[2026-01-09 20:44:22] -rw-r--r--. 1 boinc boinc      2520 Jan  9 18:02 pandaJob.out
[2026-01-09 20:44:22] -rw-------. 1 boinc boinc    989356 Jan  9 18:02 agis_schedconf.cvmfs.json
[2026-01-09 20:44:22] -rw-------. 1 boinc boinc   1516240 Jan  9 18:02 agis_ddmendpoints.agis.ALL.json
[2026-01-09 20:44:22] drwx------. 5 boinc boinc      4096 Jan  9 18:02 pilot3
[2026-01-09 20:44:22] -rw-------. 1 boinc boinc 210203869 Jan  9 20:42 HITS.47898826._035038.pool.root.1
[2026-01-09 20:44:22] -rw-r--r--. 1 boinc boinc       529 Jan  9 20:43 boinc_task_state.xml
[2026-01-09 20:44:22] -rw-------. 1 boinc boinc      1015 Jan  9 20:43 memory_monitor_summary.json
[2026-01-09 20:44:22] -rw-------. 1 boinc boinc    394542 Jan  9 20:43 log.47898826._035038.job.log.tgz.1
[2026-01-09 20:44:22] -rw-------. 1 boinc boinc      7767 Jan  9 20:43 heartbeat.json
[2026-01-09 20:44:22] -rw-r--r--. 1 boinc boinc      8192 Jan  9 20:44 boinc_mmap_file
[2026-01-09 20:44:22] -rw-r--r--. 1 boinc boinc        27 Jan  9 20:44 wrapper_checkpoint.txt
[2026-01-09 20:44:22] -rw-------. 1 boinc boinc        95 Jan  9 20:44 pilot_heartbeat.json
[2026-01-09 20:44:22] -rw-------. 1 boinc boinc       815 Jan  9 20:44 pilotlog.txt
[2026-01-09 20:44:22] -rw-------. 1 boinc boinc   1296452 Jan  9 20:44 log.47898826._035038.job.log.1
[2026-01-09 20:44:22] -rw-------. 1 boinc boinc       357 Jan  9 20:44 output.list
[2026-01-09 20:44:22] -rw-r--r--. 1 boinc boinc       620 Jan  9 20:44 runtime_log
[2026-01-09 20:44:22] -rw-------. 1 boinc boinc   1710080 Jan  9 20:44 result.tar.gz
[2026-01-09 20:44:22] -rw-------. 1 boinc boinc       652 Jan  9 20:44 SmqNDmEzFy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmEXgKDmR11gnn.diag
[2026-01-09 20:44:22] -rw-r--r--. 1 boinc boinc      8816 Jan  9 20:44 runtime_log.err
[2026-01-09 20:44:22] -rw-r--r--. 1 boinc boinc     20696 Jan  9 20:44 stderr.txt
[2026-01-09 20:44:22] HITS file was successfully produced:
[2026-01-09 20:44:22] -rw-------. 1 boinc boinc 210203869 Jan  9 20:42 shared/HITS.pool.root.1
[2026-01-09 20:44:22]  *** Contents of shared directory: ***
[2026-01-09 20:44:22] total 426352
[2026-01-09 20:44:22] -rw-r--r--. 2 boinc boinc 224053226 Jan  9 18:02 ATLAS.root_0
[2026-01-09 20:44:22] -rw-r--r--. 2 boinc boinc     15847 Jan  9 18:02 start_atlas.sh
[2026-01-09 20:44:22] -rw-r--r--. 2 boinc boinc    592396 Jan  9 18:02 input.tar.gz
[2026-01-09 20:44:22] -rw-------. 1 boinc boinc 210203869 Jan  9 20:42 HITS.pool.root.1
[2026-01-09 20:44:22] -rw-------. 1 boinc boinc   1710080 Jan  9 20:44 result.tar.gz
20:44:24 (11713): run_atlas exited; CPU time 72378.791059
20:44:24 (11713): called boinc_finish(0)

</stderr_txt>
]]>

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