Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:21:24 (17646): wrapper (7.7.26015): starting
09:21:24 (17646): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 09:21:24] Arguments: --nthreads 12
[2026-01-09 09:21:24] Threads: 12
[2026-01-09 09:21:24] Checking for CVMFS
[2026-01-09 09:21:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 09:21:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 09:21:24] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 09:21:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 09:21:24] 2.11.2.0 3009 136421 98336 154946 2 56 12725447 20275200 1 130560 0 49473493 99.879 8098839 39483 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 09:21:24] CVMFS is ok
[2026-01-09 09:21:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 09:21:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 09:21:24] Further information can be found at the LHC@home message board.
[2026-01-09 09:21:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 09:21:24] Checking for apptainer binary...
[2026-01-09 09:21:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 09:21:24] Running /usr/bin/apptainer --version
[2026-01-09 09:21:24] apptainer version 1.3.2-1.el7
[2026-01-09 09:21:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 09:21:26] c-115-42.aglt2.org
[2026-01-09 09:21:26] apptainer works
[2026-01-09 09:21:26] Set ATHENA_PROC_NUMBER=12
[2026-01-09 09:21:26] Set ATHENA_CORE_NUMBER=12
[2026-01-09 09:21:26] Starting ATLAS job with PandaID=6963153994
[2026-01-09 09:21:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 10:54:55]  *** The last 200 lines of the pilot log: ***
[2026-01-09 10:54:55]  mtime=0
[2026-01-09 10:54:55]  protocol_id=None
[2026-01-09 10:54:55]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-09 10:54:55]  replicas=None
[2026-01-09 10:54:55]  scope=mc23_13p6TeV
[2026-01-09 10:54:55]  status=None
[2026-01-09 10:54:55]  status_code=0
[2026-01-09 10:54:55]  storage_token=
[2026-01-09 10:54:55]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6963153994/log.47898826._030410.job.log.tgz.1
[2026-01-09 10:54:55]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b8/b5/log.47898826._030410.job.log.tgz.1
[2026-01-09 10:54:55]  workdir=None
[2026-01-09 10:54:55] ]
[2026-01-09 10:54:55] 2026-01-09 15:53:48,043 | INFO     | transferring file log.47898826._030410.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6963153994/log.47898826._030410.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-09 10:54:55] 2026-01-09 15:53:48,043 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6963153994/log.47898826._030410.job.log.tgz.1 /tmp/boinchome/slots/0/log.47898826._030410.job
[2026-01-09 10:54:55] 2026-01-09 15:53:48,064 | INFO     | adding to output.list: log.47898826._030410.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b8/b5/log.47898826._030410.job.log.tg
[2026-01-09 10:54:55] 2026-01-09 15:53:48,064 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-09 10:54:55] 2026-01-09 15:53:48,065 | INFO     | summary of transferred files:
[2026-01-09 10:54:55] 2026-01-09 15:53:48,065 | INFO     |  -- lfn=log.47898826._030410.job.log.tgz.1, status_code=0, status=transferred
[2026-01-09 10:54:55] 2026-01-09 15:53:48,065 | INFO     | stage-out finished correctly
[2026-01-09 10:54:55] 2026-01-09 15:53:48,141 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-09 10:54:55] 2026-01-09 15:53:48,711 | INFO     | time since job start (5527s) is within the limit (349056.0s)
[2026-01-09 10:54:55] 2026-01-09 15:53:49,824 | INFO     | PID=21339 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 10:54:55] 2026-01-09 15:53:50,046 | INFO     | monitor loop #413: job 0:6963153994 is in state 'finished'
[2026-01-09 10:54:55] 2026-01-09 15:53:50,046 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 10:54:55] 2026-01-09 15:53:50,342 | INFO     | job 6963153994 has state=finished
[2026-01-09 10:54:55] 2026-01-09 15:53:50,342 | INFO     | preparing for final server update for job 6963153994 in state='finished'
[2026-01-09 10:54:55] 2026-01-09 15:53:50,343 | INFO     | this job has now completed (state=finished)
[2026-01-09 10:54:55] 2026-01-09 15:53:50,343 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-09 10:54:55] 2026-01-09 15:53:50,343 | INFO     | log transfer has been attempted: DONE
[2026-01-09 10:54:55] 2026-01-09 15:53:50,344 | INFO     | job 6963153994 has finished - writing final server update
[2026-01-09 10:54:55] 2026-01-09 15:53:50,344 | INFO     | total number of processed events: 400 (read)
[2026-01-09 10:54:55] 2026-01-09 15:53:50,344 | INFO     | executing command: lscpu
[2026-01-09 10:54:55] 2026-01-09 15:53:50,370 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 10:54:55] 2026-01-09 15:53:50,825 | INFO     | time since job start (5529s) is within the limit (349056.0s)
[2026-01-09 10:54:55] 2026-01-09 15:53:52,559 | INFO     | monitor loop #414: job 0:6963153994 is in state 'finished'
[2026-01-09 10:54:55] 2026-01-09 15:53:52,559 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 10:54:55] 2026-01-09 15:53:52,831 | INFO     | time since job start (5531s) is within the limit (349056.0s)
[2026-01-09 10:54:55] 2026-01-09 15:53:54,837 | INFO     | time since job start (5533s) is within the limit (349056.0s)
[2026-01-09 10:54:55] 2026-01-09 15:53:54,876 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 10:54:55] 2026-01-09 15:53:54,880 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2026-01-09 10:54:55] 2026-01-09 15:53:54,883 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963153994/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 10:54:55] 2026-01-09 15:53:54,883 | INFO     | extracted standard info from prmon json
[2026-01-09 10:54:55] 2026-01-09 15:53:54,884 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 10:54:55] 2026-01-09 15:53:54,884 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 10:54:55] 2026-01-09 15:53:54,884 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 10:54:55] 2026-01-09 15:53:54,884 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 10:54:55] 2026-01-09 15:53:54,886 | INFO     | fitting pss+swap vs Time
[2026-01-09 10:54:55] 2026-01-09 15:53:54,886 | INFO     | sum of square deviations: 183761585.0
[2026-01-09 10:54:55] 2026-01-09 15:53:54,887 | INFO     | sum of deviations: -13602787201.499998
[2026-01-09 10:54:55] 2026-01-09 15:53:54,887 | INFO     | mean x: 1767971365.5
[2026-01-09 10:54:55] 2026-01-09 15:53:54,887 | INFO     | mean y: 2819878.3928571427
[2026-01-09 10:54:55] 2026-01-09 15:53:54,887 | INFO     | intersect: 130875321131.80702
[2026-01-09 10:54:55] 2026-01-09 15:53:54,887 | INFO     | chi2: 0.06422849484366394
[2026-01-09 10:54:55] 2026-01-09 15:53:54,887 | INFO     | current memory leak: -74.02 B/s (using 84 data points, chi2=0.06)
[2026-01-09 10:54:55] 2026-01-09 15:53:54,888 | INFO     | could have reported an average CPU frequency of 2110 MHz (7 samples)
[2026-01-09 10:54:55] 2026-01-09 15:53:54,888 | INFO     | ..............................
[2026-01-09 10:54:55] 2026-01-09 15:53:54,888 | INFO     | . Timing measurements:
[2026-01-09 10:54:55] 2026-01-09 15:53:54,888 | INFO     | . get job = 0 s
[2026-01-09 10:54:55] 2026-01-09 15:53:54,888 | INFO     | . initial setup = 2 s
[2026-01-09 10:54:55] 2026-01-09 15:53:54,888 | INFO     | . payload setup = 6 s
[2026-01-09 10:54:55] 2026-01-09 15:53:54,888 | INFO     | . stage-in = 0 s
[2026-01-09 10:54:55] 2026-01-09 15:53:54,889 | INFO     | . payload execution = 5500 s
[2026-01-09 10:54:55] 2026-01-09 15:53:54,889 | INFO     | . stage-out = 0 s
[2026-01-09 10:54:55] 2026-01-09 15:53:54,889 | INFO     | . log creation = 0 s
[2026-01-09 10:54:55] 2026-01-09 15:53:54,889 | INFO     | ..............................
[2026-01-09 10:54:55] 2026-01-09 15:53:54,963 | INFO     | 
[2026-01-09 10:54:55] 2026-01-09 15:53:54,963 | INFO     | job summary report
[2026-01-09 10:54:55] 2026-01-09 15:53:54,963 | INFO     | --------------------------------------------------
[2026-01-09 10:54:55] 2026-01-09 15:53:54,964 | INFO     | PanDA job id: 6963153994
[2026-01-09 10:54:55] 2026-01-09 15:53:54,964 | INFO     | task id: 47898826
[2026-01-09 10:54:55] 2026-01-09 15:53:54,964 | INFO     | errors: (none)
[2026-01-09 10:54:55] 2026-01-09 15:53:54,964 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 10:54:55] 2026-01-09 15:53:54,964 | INFO     | pilot state: finished 
[2026-01-09 10:54:55] 2026-01-09 15:53:54,964 | INFO     | transexitcode: 0
[2026-01-09 10:54:55] 2026-01-09 15:53:54,965 | INFO     | exeerrorcode: 0
[2026-01-09 10:54:55] 2026-01-09 15:53:54,965 | INFO     | exeerrordiag: 
[2026-01-09 10:54:55] 2026-01-09 15:53:54,965 | INFO     | exitcode: 0
[2026-01-09 10:54:55] 2026-01-09 15:53:54,965 | INFO     | exitmsg: OK
[2026-01-09 10:54:55] 2026-01-09 15:53:54,965 | INFO     | cpuconsumptiontime: 60899 s
[2026-01-09 10:54:55] 2026-01-09 15:53:54,965 | INFO     | nevents: 400
[2026-01-09 10:54:55] 2026-01-09 15:53:54,965 | INFO     | neventsw: 0
[2026-01-09 10:54:55] 2026-01-09 15:53:54,965 | INFO     | pid: 27773
[2026-01-09 10:54:55] 2026-01-09 15:53:54,965 | INFO     | pgrp: 27773
[2026-01-09 10:54:55] 2026-01-09 15:53:54,965 | INFO     | corecount: 12
[2026-01-09 10:54:55] 2026-01-09 15:53:54,966 | INFO     | event service: False
[2026-01-09 10:54:55] 2026-01-09 15:53:54,966 | INFO     | sizes: {0: 2283970, 5: 2284232, 11: 2284288, 5511: 2319842, 5512: 2319842, 5518: 2320036}
[2026-01-09 10:54:55] 2026-01-09 15:53:54,966 | INFO     | --------------------------------------------------
[2026-01-09 10:54:55] 2026-01-09 15:53:54,966 | INFO     | 
[2026-01-09 10:54:55] 2026-01-09 15:53:54,966 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 10:54:55] 2026-01-09 15:53:54,989 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 10:54:55] 2026-01-09 15:53:54,989 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 10:54:55] 2026-01-09 15:53:54,990 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 10:54:55] 2026-01-09 15:53:54,990 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 10:54:55] 2026-01-09 15:53:54,990 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 10:54:55] 2026-01-09 15:53:54,990 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 10:54:55] 2026-01-09 15:53:54,990 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 10:54:55] 2026-01-09 15:53:54,991 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 10:54:55] 2026-01-09 15:53:54,991 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 10:54:55] 2026-01-09 15:53:54,991 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 10:54:55] 2026-01-09 15:53:54,991 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 10:54:55] 2026-01-09 15:53:54,991 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 10:54:55] 2026-01-09 15:53:54,991 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 10:54:55] 2026-01-09 15:53:54,992 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 10:54:55] 2026-01-09 15:53:54,992 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 10:54:55] 2026-01-09 15:53:54,992 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 10:54:55] 2026-01-09 15:53:54,992 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 10:54:55] 2026-01-09 15:53:54,992 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 10:54:55] 2026-01-09 15:53:54,992 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 10:54:55] 2026-01-09 15:53:54,993 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 10:54:55] 2026-01-09 15:53:54,993 | INFO     | job 6963153994 has completed (purged errors)
[2026-01-09 10:54:55] 2026-01-09 15:53:54,993 | INFO     | overall cleanup function is called
[2026-01-09 10:54:55] 2026-01-09 15:53:56,001 | INFO     | --- collectZombieJob: --- 10, [27773]
[2026-01-09 10:54:55] 2026-01-09 15:53:56,001 | INFO     | zombie collector waiting for pid 27773
[2026-01-09 10:54:55] 2026-01-09 15:53:56,001 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 10:54:55] 2026-01-09 15:53:56,001 | INFO     | collected zombie processes
[2026-01-09 10:54:55] 2026-01-09 15:53:56,002 | INFO     | will attempt to kill all subprocesses of pid=27773
[2026-01-09 10:54:55] 2026-01-09 15:53:56,088 | INFO     | process IDs to be killed: [27773] (in reverse order)
[2026-01-09 10:54:55] 2026-01-09 15:53:56,138 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 10:54:55] 2026-01-09 15:53:56,139 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 10:54:55] 2026-01-09 15:53:56,141 | INFO     | did not find any defunct processes belonging to 27773
[2026-01-09 10:54:55] 2026-01-09 15:53:56,144 | INFO     | did not find any defunct processes belonging to 27773
[2026-01-09 10:54:55] 2026-01-09 15:53:56,144 | INFO     | ready for new job
[2026-01-09 10:54:55] 2026-01-09 15:53:56,144 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 10:54:55] 2026-01-09 15:53:56,145 | INFO     | ***************************************
[2026-01-09 10:54:55] 2026-01-09 15:53:56,145 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 10:54:55] 2026-01-09 15:53:56,146 | INFO     | ***************************************
[2026-01-09 10:54:55] 2026-01-09 15:53:56,146 | INFO     | 
[2026-01-09 10:54:55] 2026-01-09 15:53:56,146 | INFO     | architecture information:
[2026-01-09 10:54:55] 2026-01-09 15:53:56,147 | INFO     | executing command: cat /etc/os-release
[2026-01-09 10:54:55] 2026-01-09 15:53:56,161 | INFO     | cat /etc/os-release:
[2026-01-09 10:54:55] NAME="CentOS Linux"
[2026-01-09 10:54:55] VERSION="7 (Core)"
[2026-01-09 10:54:55] ID="centos"
[2026-01-09 10:54:55] ID_LIKE="rhel fedora"
[2026-01-09 10:54:55] VERSION_ID="7"
[2026-01-09 10:54:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 10:54:55] ANSI_COLOR="0;31"
[2026-01-09 10:54:55] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 10:54:55] HOME_URL="https://www.centos.org/"
[2026-01-09 10:54:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 10:54:55] 
[2026-01-09 10:54:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 10:54:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 10:54:55] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 10:54:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 10:54:55] 
[2026-01-09 10:54:55] 2026-01-09 15:53:56,162 | INFO     | ***************************************
[2026-01-09 10:54:55] 2026-01-09 15:53:56,665 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 10:54:55] 2026-01-09 15:53:56,682 | INFO     | sufficient remaining disk space (18533580800 B)
[2026-01-09 10:54:55] 2026-01-09 15:53:56,683 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 10:54:55] 2026-01-09 15:53:56,683 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 10:54:55] 2026-01-09 15:53:56,683 | INFO     | update_server=False
[2026-01-09 10:54:55] 2026-01-09 15:53:56,683 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 10:54:55] 2026-01-09 15:53:56,684 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 10:54:55] 2026-01-09 15:53:56,684 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 10:54:55] 2026-01-09 15:53:56,684 | INFO     | aborting loop
[2026-01-09 10:54:55] 2026-01-09 15:53:56,685 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-09 10:54:55] 2026-01-09 15:53:56,685 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 10:54:55] 2026-01-09 15:53:56,685 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 10:54:55] 2026-01-09 15:53:56,685 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 10:54:55] 2026-01-09 15:53:56,686 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 10:54:55] 2026-01-09 15:53:56,749 | INFO     | all data control threads have been joined
[2026-01-09 10:54:55] 2026-01-09 15:53:57,170 | INFO     | all payload control threads have been joined
[2026-01-09 10:54:55] 2026-01-09 15:53:57,689 | INFO     | [job] retrieve thread has finished
[2026-01-09 10:54:55] 2026-01-09 15:53:57,689 | INFO     | [job] job monitor thread has finished
[2026-01-09 10:54:55] 2026-01-09 15:53:57,691 | INFO     | [job] queue monitor thread has finished
[2026-01-09 10:54:55] 2026-01-09 15:53:57,754 | INFO     | [data] control thread has finished
[2026-01-09 10:54:55] 2026-01-09 15:53:57,946 | INFO     | [payload] validate_post thread has finished
[2026-01-09 10:54:55] 2026-01-09 15:53:57,990 | INFO     | all job control threads have been joined
[2026-01-09 10:54:55] 2026-01-09 15:53:58,175 | INFO     | [payload] control thread has finished
[2026-01-09 10:54:55] 2026-01-09 15:53:58,345 | INFO     | [job] validate thread has finished
[2026-01-09 10:54:55] 2026-01-09 15:53:58,485 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 10:54:55] 2026-01-09 15:53:58,499 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 10:54:55] 2026-01-09 15:53:58,689 | INFO     | [data] copytool_out thread has finished
[2026-01-09 10:54:55] 2026-01-09 15:53:58,719 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 10:54:55] 2026-01-09 15:53:58,772 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 10:54:55] 2026-01-09 15:53:58,949 | INFO     | [payload] failed_post thread has finished
[2026-01-09 10:54:55] 2026-01-09 15:53:58,980 | INFO     | [data] copytool_in thread has finished
[2026-01-09 10:54:55] 2026-01-09 15:53:58,995 | INFO     | [job] control thread has finished
[2026-01-09 10:54:55] 2026-01-09 15:54:02,725 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 10:54:55] 2026-01-09 15:54:07,270 | INFO     | job.realtimelogging is not enabled
[2026-01-09 10:54:55] 2026-01-09 15:54:08,275 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 10:54:55] 2026-01-09 15:54:49,626 | INFO     | [monitor] cgroup control has ended
[2026-01-09 10:54:55] 2026-01-09 15:54:50,037 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140132066895680)>', '<ExcThread(monitor, started 140130824222464)>']
[2026-01-09 10:54:55] 2026-01-09 15:54:50,950 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 10:54:55] 2026-01-09 15:54:50,950 | INFO     | [monitor] control thread has ended
[2026-01-09 10:54:55] 2026-01-09 15:54:55,063 | INFO     | all workflow threads have been joined
[2026-01-09 10:54:55] 2026-01-09 15:54:55,063 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 10:54:55] 2026-01-09 15:54:55,063 | INFO     | traces error code: 0
[2026-01-09 10:54:55] 2026-01-09 15:54:55,064 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 10:54:55] 2026-01-09 15:54:55,153 [wrapper] ==== pilot stdout END ====
[2026-01-09 10:54:55] 2026-01-09 15:54:55,156 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 10:54:55] 2026-01-09 15:54:55,160 [wrapper] pilotpid: 21339
[2026-01-09 10:54:55] 2026-01-09 15:54:55,164 [wrapper] Pilot exit status: 0
[2026-01-09 10:54:55] 2026-01-09 15:54:55,179 [wrapper] pandaids: 6963153994
[2026-01-09 10:54:55] 2026-01-09 15:54:55,224 [wrapper] cleanup supervisor_pilot  7300 21340
[2026-01-09 10:54:55] 2026-01-09 15:54:55,227 [wrapper] Test setup, not cleaning
[2026-01-09 10:54:55] 2026-01-09 15:54:55,231 [wrapper] apfmon messages muted
[2026-01-09 10:54:55] 2026-01-09 15:54:55,235 [wrapper] ==== wrapper stdout END ====
[2026-01-09 10:54:55] 2026-01-09 15:54:55,239 [wrapper] ==== wrapper stderr END ====
[2026-01-09 10:54:55]  *** Error codes and diagnostics ***
[2026-01-09 10:54:55]     "exeErrorCode": 0,
[2026-01-09 10:54:55]     "exeErrorDiag": "",
[2026-01-09 10:54:55]     "pilotErrorCode": 0,
[2026-01-09 10:54:55]     "pilotErrorDiag": "",
[2026-01-09 10:54:55]  *** Listing of results directory ***
[2026-01-09 10:54:55] total 443140
[2026-01-09 10:54:55] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 14:06 pilot3.tar.gz
[2026-01-09 10:54:55] -rwx------ 1 boincer umatlas     36322 Jan  8 14:06 runpilot2-wrapper.sh
[2026-01-09 10:54:55] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 14:06 queuedata.json
[2026-01-09 10:54:55] -rw-r--r-- 1 boincer umatlas       100 Jan  9 09:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 10:54:55] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 09:21 run_atlas
[2026-01-09 10:54:55] -rw-r--r-- 1 boincer umatlas       105 Jan  9 09:21 job.xml
[2026-01-09 10:54:55] -rw-r--r-- 2 boincer umatlas 225758411 Jan  9 09:21 EVNT.47898824._001177.pool.root.1
[2026-01-09 10:54:55] -rw-r--r-- 2 boincer umatlas    592389 Jan  9 09:21 input.tar.gz
[2026-01-09 10:54:55] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 09:21 start_atlas.sh
[2026-01-09 10:54:55] drwxrwx--x 2 boincer umatlas      4096 Jan  9 09:21 shared
[2026-01-09 10:54:55] -rw-r--r-- 1 boincer umatlas         0 Jan  9 09:21 boinc_lockfile
[2026-01-09 10:54:55] -rw-r--r-- 1 boincer umatlas      2519 Jan  9 09:21 pandaJob.out
[2026-01-09 10:54:55] -rw------- 1 boincer umatlas        57 Jan  9 09:21 setup.sh.local
[2026-01-09 10:54:55] -rw------- 1 boincer umatlas    989377 Jan  9 09:21 agis_schedconf.cvmfs.json
[2026-01-09 10:54:55] -rw------- 1 boincer umatlas   1516240 Jan  9 09:21 agis_ddmendpoints.agis.ALL.json
[2026-01-09 10:54:55] drwx------ 5 boincer umatlas      4096 Jan  9 09:21 pilot3
[2026-01-09 10:54:55] -rw------- 1 boincer umatlas 221720517 Jan  9 10:53 HITS.47898826._030410.pool.root.1
[2026-01-09 10:54:55] -rw-r--r-- 1 boincer umatlas       529 Jan  9 10:53 boinc_task_state.xml
[2026-01-09 10:54:55] -rw------- 1 boincer umatlas      1047 Jan  9 10:53 memory_monitor_summary.json
[2026-01-09 10:54:55] -rw------- 1 boincer umatlas    398495 Jan  9 10:53 log.47898826._030410.job.log.tgz.1
[2026-01-09 10:54:55] -rw------- 1 boincer umatlas        95 Jan  9 10:53 pilot_heartbeat.json
[2026-01-09 10:54:55] -rw------- 1 boincer umatlas      7855 Jan  9 10:53 heartbeat.json
[2026-01-09 10:54:55] -rw-r--r-- 1 boincer umatlas      5954 Jan  9 10:54 init_data.xml
[2026-01-09 10:54:55] -rw-r--r-- 1 boincer umatlas        27 Jan  9 10:54 wrapper_checkpoint.txt
[2026-01-09 10:54:55] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 10:54 boinc_mmap_file
[2026-01-09 10:54:55] -rw------- 1 boincer umatlas      4624 Jan  9 10:54 pilotlog.txt
[2026-01-09 10:54:55] -rw------- 1 boincer umatlas    793069 Jan  9 10:54 log.47898826._030410.job.log.1
[2026-01-09 10:54:55] -rw------- 1 boincer umatlas       357 Jan  9 10:54 output.list
[2026-01-09 10:54:55] -rw-r--r-- 1 boincer umatlas       620 Jan  9 10:54 runtime_log
[2026-01-09 10:54:55] -rw------- 1 boincer umatlas   1208320 Jan  9 10:54 result.tar.gz
[2026-01-09 10:54:55] -rw-r--r-- 1 boincer umatlas      9344 Jan  9 10:54 runtime_log.err
[2026-01-09 10:54:55] -rw------- 1 boincer umatlas       659 Jan  9 10:54 oCLKDm9VAy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmuwfKDmIyJDTo.diag
[2026-01-09 10:54:55] -rw-r--r-- 1 boincer umatlas     21733 Jan  9 10:54 stderr.txt
[2026-01-09 10:54:55] HITS file was successfully produced:
[2026-01-09 10:54:55] -rw------- 1 boincer umatlas 221720517 Jan  9 10:53 shared/HITS.pool.root.1
[2026-01-09 10:54:55]  *** Contents of shared directory: ***
[2026-01-09 10:54:55] total 438776
[2026-01-09 10:54:55] -rw-r--r-- 2 boincer umatlas 225758411 Jan  9 09:21 ATLAS.root_0
[2026-01-09 10:54:55] -rw-r--r-- 2 boincer umatlas    592389 Jan  9 09:21 input.tar.gz
[2026-01-09 10:54:55] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 09:21 start_atlas.sh
[2026-01-09 10:54:55] -rw------- 1 boincer umatlas 221720517 Jan  9 10:53 HITS.pool.root.1
[2026-01-09 10:54:55] -rw------- 1 boincer umatlas   1208320 Jan  9 10:54 result.tar.gz
10:54:56 (17646): run_atlas exited; CPU time 60861.018380
10:54:56 (17646): called boinc_finish(0)

</stderr_txt>
]]>

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