Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:55:44 (3778898): wrapper (7.7.26015): starting
09:55:44 (3778898): wrapper: running run_atlas (--nthreads 9)
[2026-01-09 09:55:44] Arguments: --nthreads 9
[2026-01-09 09:55:44] Threads: 9
[2026-01-09 09:55:44] Checking for CVMFS
[2026-01-09 09:55:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 09:55:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 09:55:45] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 09:55:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 09:55:45] 2.13.3.0 11460 93558 147576 154946 2 269 32748511 32935937 15838 16776704 0 756872889 99.641 694297698 35562 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 09:55:45] CVMFS is ok
[2026-01-09 09:55:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 09:55:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 09:55:45] Further information can be found at the LHC@home message board.
[2026-01-09 09:55:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 09:55:45] Checking for apptainer binary...
[2026-01-09 09:55:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 09:55:45] Running /usr/bin/apptainer --version
[2026-01-09 09:55:45] apptainer version 1.4.5-2.el9
[2026-01-09 09:55:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 09:55:45] c7-3-34.aglt2.org
[2026-01-09 09:55:45] apptainer works
[2026-01-09 09:55:45] Set ATHENA_PROC_NUMBER=9
[2026-01-09 09:55:45] Set ATHENA_CORE_NUMBER=9
[2026-01-09 09:55:45] Starting ATLAS job with PandaID=6963166037
[2026-01-09 09:55:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 15:19:56]  *** The last 200 lines of the pilot log: ***
[2026-01-09 15:19:56] 2026-01-09 20:19:20,253 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 15:19:56] 2026-01-09 20:19:20,276 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3140.4821562499997
[2026-01-09 15:19:56] 2026-01-09 20:19:20,402 | INFO     | time since job start (19394s) is within the limit (349056.0s)
[2026-01-09 15:19:56] 2026-01-09 20:19:20,405 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6963166037/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 15:19:56] 2026-01-09 20:19:20,406 | INFO     | extracted standard info from prmon json
[2026-01-09 15:19:56] 2026-01-09 20:19:20,406 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 15:19:56] 2026-01-09 20:19:20,406 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 15:19:56] 2026-01-09 20:19:20,420 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 15:19:56] 2026-01-09 20:19:20,421 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 15:19:56] 2026-01-09 20:19:20,443 | INFO     | fitting pss+swap vs Time
[2026-01-09 15:19:56] 2026-01-09 20:19:20,444 | INFO     | sum of square deviations: 9877573475.987423
[2026-01-09 15:19:56] 2026-01-09 20:19:20,481 | INFO     | sum of deviations: 69750257379.7256
[2026-01-09 15:19:56] 2026-01-09 20:19:20,482 | INFO     | mean x: 1767980250.006309
[2026-01-09 15:19:56] 2026-01-09 20:19:20,482 | INFO     | mean y: 2540710.637223975
[2026-01-09 15:19:56] 2026-01-09 20:19:20,482 | INFO     | intersect: -12482011065.16054
[2026-01-09 15:19:56] 2026-01-09 20:19:20,482 | INFO     | chi2: 1.4263490242156678
[2026-01-09 15:19:56] 2026-01-09 20:19:20,483 | INFO     | sum of square deviations: 9417509645.98717
[2026-01-09 15:19:56] 2026-01-09 20:19:20,485 | INFO     | sum of deviations: 68273023738.2821
[2026-01-09 15:19:56] 2026-01-09 20:19:20,485 | INFO     | mean x: 1767980097.5064104
[2026-01-09 15:19:56] 2026-01-09 20:19:20,485 | INFO     | mean y: 2540220.858974359
[2026-01-09 15:19:56] 2026-01-09 20:19:20,485 | INFO     | intersect: -12814579347.189293
[2026-01-09 15:19:56] 2026-01-09 20:19:20,502 | INFO     | chi2: 1.42650926167822
[2026-01-09 15:19:56] 2026-01-09 20:19:20,503 | INFO     | current chi2=1.42650926167822 (change=-0.011234099076159772 %)
[2026-01-09 15:19:56] 2026-01-09 20:19:20,503 | INFO     | right removable region: 311
[2026-01-09 15:19:56] 2026-01-09 20:19:20,503 | INFO     | sum of square deviations: 9417508425.98717
[2026-01-09 15:19:56] 2026-01-09 20:19:20,505 | INFO     | sum of deviations: 19013153717.50003
[2026-01-09 15:19:56] 2026-01-09 20:19:20,505 | INFO     | mean x: 1767980402.5064104
[2026-01-09 15:19:56] 2026-01-09 20:19:20,505 | INFO     | mean y: 2557416.75
[2026-01-09 15:19:56] 2026-01-09 20:19:20,505 | INFO     | intersect: -3566845618.7305174
[2026-01-09 15:19:56] 2026-01-09 20:19:20,506 | INFO     | chi2: 0.006953522990696801
[2026-01-09 15:19:56] 2026-01-09 20:19:20,506 | INFO     | current chi2=0.006953522990696801 (change=99.51249498736676 %)
[2026-01-09 15:19:56] 2026-01-09 20:19:20,511 | INFO     | sum of square deviations: 8971993338.0
[2026-01-09 15:19:56] 2026-01-09 20:19:20,513 | INFO     | sum of deviations: 21209093050.000008
[2026-01-09 15:19:56] 2026-01-09 20:19:20,513 | INFO     | mean x: 1767980555.0
[2026-01-09 15:19:56] 2026-01-09 20:19:20,513 | INFO     | mean y: 2556663.1205211724
[2026-01-09 15:19:56] 2026-01-09 20:19:20,514 | INFO     | intersect: -4176811587.4966145
[2026-01-09 15:19:56] 2026-01-09 20:19:20,514 | INFO     | chi2: 0.0033024607237918824
[2026-01-09 15:19:56] 2026-01-09 20:19:20,514 | INFO     | current chi2=0.0033024607237918824 (change=52.50665413474172 %)
[2026-01-09 15:19:56] 2026-01-09 20:19:20,514 | INFO     | sum of square deviations: 8540720135.5
[2026-01-09 15:19:56] 2026-01-09 20:19:20,520 | INFO     | sum of deviations: 18888419664.000004
[2026-01-09 15:19:56] 2026-01-09 20:19:20,521 | INFO     | mean x: 1767980707.5
[2026-01-09 15:19:56] 2026-01-09 20:19:20,521 | INFO     | mean y: 2557483.390728477
[2026-01-09 15:19:56] 2026-01-09 20:19:20,521 | INFO     | intersect: -3907459591.4353194
[2026-01-09 15:19:56] 2026-01-09 20:19:20,521 | INFO     | chi2: 0.002656789765638194
[2026-01-09 15:19:56] 2026-01-09 20:19:20,521 | INFO     | current chi2=0.002656789765638194 (change=19.551207785821283 %)
[2026-01-09 15:19:56] 2026-01-09 20:19:20,521 | INFO     | left removable region: 30
[2026-01-09 15:19:56] 2026-01-09 20:19:20,521 | INFO     | sum of square deviations: 6880054580.0
[2026-01-09 15:19:56] 2026-01-09 20:19:20,527 | INFO     | sum of deviations: 12976838843.0
[2026-01-09 15:19:56] 2026-01-09 20:19:20,527 | INFO     | mean x: 1767980982.0
[2026-01-09 15:19:56] 2026-01-09 20:19:20,527 | INFO     | mean y: 2559250.9466192173
[2026-01-09 15:19:56] 2026-01-09 20:19:20,528 | INFO     | intersect: -3332124219.0939465
[2026-01-09 15:19:56] 2026-01-09 20:19:20,528 | INFO     | chi2: 0.0015606092089742623
[2026-01-09 15:19:56] 2026-01-09 20:19:20,528 | INFO     | current memory leak: 1.89 B/s (using 281 data points, chi2=0.00)
[2026-01-09 15:19:56] 2026-01-09 20:19:20,529 | INFO     | could have reported an average CPU frequency of 3139 MHz (14 samples)
[2026-01-09 15:19:56] 2026-01-09 20:19:20,529 | INFO     | ..............................
[2026-01-09 15:19:56] 2026-01-09 20:19:20,529 | INFO     | . Timing measurements:
[2026-01-09 15:19:56] 2026-01-09 20:19:20,529 | INFO     | . get job = 0 s
[2026-01-09 15:19:56] 2026-01-09 20:19:20,529 | INFO     | . initial setup = 3 s
[2026-01-09 15:19:56] 2026-01-09 20:19:20,529 | INFO     | . payload setup = 11 s
[2026-01-09 15:19:56] 2026-01-09 20:19:20,529 | INFO     | . stage-in = 0 s
[2026-01-09 15:19:56] 2026-01-09 20:19:20,533 | INFO     | . payload execution = 19341 s
[2026-01-09 15:19:56] 2026-01-09 20:19:20,533 | INFO     | . stage-out = 3 s
[2026-01-09 15:19:56] 2026-01-09 20:19:20,533 | INFO     | . log creation = 0 s
[2026-01-09 15:19:56] 2026-01-09 20:19:20,533 | INFO     | ..............................
[2026-01-09 15:19:56] 2026-01-09 20:19:20,837 | INFO     | 
[2026-01-09 15:19:56] 2026-01-09 20:19:20,837 | INFO     | job summary report
[2026-01-09 15:19:56] 2026-01-09 20:19:20,838 | INFO     | --------------------------------------------------
[2026-01-09 15:19:56] 2026-01-09 20:19:20,838 | INFO     | PanDA job id: 6963166037
[2026-01-09 15:19:56] 2026-01-09 20:19:20,838 | INFO     | task id: 47898826
[2026-01-09 15:19:56] 2026-01-09 20:19:20,838 | INFO     | errors: (none)
[2026-01-09 15:19:56] 2026-01-09 20:19:20,838 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 15:19:56] 2026-01-09 20:19:20,838 | INFO     | pilot state: finished 
[2026-01-09 15:19:56] 2026-01-09 20:19:20,838 | INFO     | transexitcode: 0
[2026-01-09 15:19:56] 2026-01-09 20:19:20,838 | INFO     | exeerrorcode: 0
[2026-01-09 15:19:56] 2026-01-09 20:19:20,838 | INFO     | exeerrordiag: 
[2026-01-09 15:19:56] 2026-01-09 20:19:20,838 | INFO     | exitcode: 0
[2026-01-09 15:19:56] 2026-01-09 20:19:20,838 | INFO     | exitmsg: OK
[2026-01-09 15:19:56] 2026-01-09 20:19:20,838 | INFO     | cpuconsumptiontime: 45096 s
[2026-01-09 15:19:56] 2026-01-09 20:19:20,838 | INFO     | nevents: 400
[2026-01-09 15:19:56] 2026-01-09 20:19:20,838 | INFO     | neventsw: 0
[2026-01-09 15:19:56] 2026-01-09 20:19:20,838 | INFO     | pid: 3799017
[2026-01-09 15:19:56] 2026-01-09 20:19:20,838 | INFO     | pgrp: 3799017
[2026-01-09 15:19:56] 2026-01-09 20:19:20,838 | INFO     | corecount: 9
[2026-01-09 15:19:56] 2026-01-09 20:19:20,839 | INFO     | event service: False
[2026-01-09 15:19:56] 2026-01-09 20:19:20,839 | INFO     | sizes: {0: 2283855, 1: 2283997, 10: 2284259, 11: 2284287, 19358: 2317344, 19362: 2326342, 19363: 2326526, 19372: 2326720}
[2026-01-09 15:19:56] 2026-01-09 20:19:20,839 | INFO     | --------------------------------------------------
[2026-01-09 15:19:56] 2026-01-09 20:19:20,839 | INFO     | 
[2026-01-09 15:19:56] 2026-01-09 20:19:20,839 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-09 15:19:56] 2026-01-09 20:19:20,881 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 15:19:56] 2026-01-09 20:19:20,882 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 15:19:56] 2026-01-09 20:19:20,882 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 15:19:56] 2026-01-09 20:19:20,882 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 15:19:56] 2026-01-09 20:19:20,882 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 15:19:56] 2026-01-09 20:19:20,882 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 15:19:56] 2026-01-09 20:19:20,882 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 15:19:56] 2026-01-09 20:19:20,882 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 15:19:56] 2026-01-09 20:19:20,882 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 15:19:56] 2026-01-09 20:19:20,882 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 15:19:56] 2026-01-09 20:19:20,883 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 15:19:56] 2026-01-09 20:19:20,883 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 15:19:56] 2026-01-09 20:19:20,883 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 15:19:56] 2026-01-09 20:19:20,883 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 15:19:56] 2026-01-09 20:19:20,883 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 15:19:56] 2026-01-09 20:19:20,883 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 15:19:56] 2026-01-09 20:19:20,883 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 15:19:56] 2026-01-09 20:19:20,883 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 15:19:56] 2026-01-09 20:19:20,883 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 15:19:56] 2026-01-09 20:19:20,883 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 15:19:56] 2026-01-09 20:19:20,883 | INFO     | job 6963166037 has completed (purged errors)
[2026-01-09 15:19:56] 2026-01-09 20:19:20,884 | INFO     | overall cleanup function is called
[2026-01-09 15:19:56] 2026-01-09 20:19:21,893 | INFO     | --- collectZombieJob: --- 10, [3799017]
[2026-01-09 15:19:56] 2026-01-09 20:19:21,894 | INFO     | zombie collector waiting for pid 3799017
[2026-01-09 15:19:56] 2026-01-09 20:19:21,894 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 15:19:56] 2026-01-09 20:19:21,894 | INFO     | collected zombie processes
[2026-01-09 15:19:56] 2026-01-09 20:19:21,894 | INFO     | will attempt to kill all subprocesses of pid=3799017
[2026-01-09 15:19:56] 2026-01-09 20:19:23,246 | INFO     | process IDs to be killed: [3799017] (in reverse order)
[2026-01-09 15:19:56] 2026-01-09 20:19:23,402 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 15:19:56] 2026-01-09 20:19:23,406 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 15:19:56] 2026-01-09 20:19:23,471 | INFO     | did not find any defunct processes belonging to 3799017
[2026-01-09 15:19:56] 2026-01-09 20:19:23,540 | INFO     | did not find any defunct processes belonging to 3799017
[2026-01-09 15:19:56] 2026-01-09 20:19:23,556 | INFO     | ready for new job
[2026-01-09 15:19:56] 2026-01-09 20:19:23,557 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 15:19:56] 2026-01-09 20:19:23,559 | INFO     | ***************************************
[2026-01-09 15:19:56] 2026-01-09 20:19:23,559 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 15:19:56] 2026-01-09 20:19:23,559 | INFO     | ***************************************
[2026-01-09 15:19:56] 2026-01-09 20:19:23,559 | INFO     | 
[2026-01-09 15:19:56] 2026-01-09 20:19:23,596 | INFO     | architecture information:
[2026-01-09 15:19:56] 2026-01-09 20:19:23,600 | INFO     | executing command: cat /etc/os-release
[2026-01-09 15:19:56] 2026-01-09 20:19:23,636 | INFO     | cat /etc/os-release:
[2026-01-09 15:19:56] NAME="CentOS Linux"
[2026-01-09 15:19:56] VERSION="7 (Core)"
[2026-01-09 15:19:56] ID="centos"
[2026-01-09 15:19:56] ID_LIKE="rhel fedora"
[2026-01-09 15:19:56] VERSION_ID="7"
[2026-01-09 15:19:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 15:19:56] ANSI_COLOR="0;31"
[2026-01-09 15:19:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 15:19:56] HOME_URL="https://www.centos.org/"
[2026-01-09 15:19:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 15:19:56] 
[2026-01-09 15:19:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 15:19:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 15:19:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 15:19:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 15:19:56] 
[2026-01-09 15:19:56] 2026-01-09 20:19:23,636 | INFO     | ***************************************
[2026-01-09 15:19:56] 2026-01-09 20:19:24,139 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-09 15:19:56] 2026-01-09 20:19:24,171 | INFO     | sufficient remaining disk space (74039951360 B)
[2026-01-09 15:19:56] 2026-01-09 20:19:24,172 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 15:19:56] 2026-01-09 20:19:24,172 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 15:19:56] 2026-01-09 20:19:24,172 | INFO     | update_server=False
[2026-01-09 15:19:56] 2026-01-09 20:19:24,172 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 15:19:56] 2026-01-09 20:19:24,173 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 15:19:56] 2026-01-09 20:19:24,174 | INFO     | aborting loop
[2026-01-09 15:19:56] 2026-01-09 20:19:24,360 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 15:19:56] 2026-01-09 20:19:24,486 | INFO     | all payload control threads have been joined
[2026-01-09 15:19:56] 2026-01-09 20:19:24,998 | INFO     | all data control threads have been joined
[2026-01-09 15:19:56] 2026-01-09 20:19:25,151 | INFO     | all job control threads have been joined
[2026-01-09 15:19:56] 2026-01-09 20:19:25,178 | INFO     | [job] retrieve thread has finished
[2026-01-09 15:19:56] 2026-01-09 20:19:25,180 | INFO     | [job] job monitor thread has finished
[2026-01-09 15:19:56] 2026-01-09 20:19:25,505 | INFO     | [payload] control thread has finished
[2026-01-09 15:19:56] 2026-01-09 20:19:25,626 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 15:19:56] 2026-01-09 20:19:25,721 | INFO     | [payload] failed_post thread has finished
[2026-01-09 15:19:56] 2026-01-09 20:19:25,865 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 15:19:56] 2026-01-09 20:19:26,008 | INFO     | [data] control thread has finished
[2026-01-09 15:19:56] 2026-01-09 20:19:26,147 | INFO     | [job] validate thread has finished
[2026-01-09 15:19:56] 2026-01-09 20:19:26,176 | INFO     | [job] control thread has finished
[2026-01-09 15:19:56] 2026-01-09 20:19:26,332 | INFO     | [payload] validate_post thread has finished
[2026-01-09 15:19:56] 2026-01-09 20:19:26,356 | INFO     | [data] copytool_in thread has finished
[2026-01-09 15:19:56] 2026-01-09 20:19:26,366 | INFO     | [data] copytool_out thread has finished
[2026-01-09 15:19:56] 2026-01-09 20:19:26,378 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 15:19:56] 2026-01-09 20:19:26,379 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 15:19:56] 2026-01-09 20:19:26,385 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 15:19:56] 2026-01-09 20:19:26,871 | INFO     | [job] queue monitor thread has finished
[2026-01-09 15:19:56] 2026-01-09 20:19:27,626 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 15:19:56] 2026-01-09 20:19:31,647 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 15:19:56] 2026-01-09 20:19:40,173 | INFO     | [monitor] cgroup control has ended
[2026-01-09 15:19:56] 2026-01-09 20:19:40,307 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140371408467776)>', '<ExcThread(monitor, started 140370906167040)>']
[2026-01-09 15:19:56] 2026-01-09 20:19:45,333 | INFO     | all workflow threads have been joined
[2026-01-09 15:19:56] 2026-01-09 20:19:45,333 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 15:19:56] 2026-01-09 20:19:45,334 | INFO     | traces error code: 0
[2026-01-09 15:19:56] 2026-01-09 20:19:45,334 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 15:19:56] 2026-01-09 20:19:55,496 | INFO     | PID=3785114 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 15:19:56] 2026-01-09 20:19:55,496 | INFO     | .. there are 17 such processes running
[2026-01-09 15:19:56] 2026-01-09 20:19:55,496 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 15:19:56] 2026-01-09 20:19:55,496 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 15:19:56] 2026-01-09 20:19:55,496 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 15:19:56] 2026-01-09 20:19:55,496 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 15:19:56] 2026-01-09 20:19:55,496 | CRITICAL | thread 'MainThread' is not alive
[2026-01-09 15:19:56] 2026-01-09 20:19:55,497 | INFO     | [monitor] control thread has ended
[2026-01-09 15:19:56] 2026-01-09 20:19:55,799 [wrapper] ==== pilot stdout END ====
[2026-01-09 15:19:56] 2026-01-09 20:19:55,803 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 15:19:56] 2026-01-09 20:19:55,805 [wrapper] pilotpid: 3785114
[2026-01-09 15:19:56] 2026-01-09 20:19:55,807 [wrapper] Pilot exit status: 0
[2026-01-09 15:19:56] 2026-01-09 20:19:55,816 [wrapper] pandaids: 6963166037
[2026-01-09 15:19:56] 2026-01-09 20:19:55,899 [wrapper] cleanup supervisor_pilot  412544 3785116
[2026-01-09 15:19:56] 2026-01-09 20:19:55,903 [wrapper] Test setup, not cleaning
[2026-01-09 15:19:56] 2026-01-09 20:19:55,906 [wrapper] apfmon messages muted
[2026-01-09 15:19:56] 2026-01-09 20:19:55,908 [wrapper] ==== wrapper stdout END ====
[2026-01-09 15:19:56] 2026-01-09 20:19:55,926 [wrapper] ==== wrapper stderr END ====
[2026-01-09 15:19:56]  *** Error codes and diagnostics ***
[2026-01-09 15:19:56]     "exeErrorCode": 0,
[2026-01-09 15:19:56]     "exeErrorDiag": "",
[2026-01-09 15:19:56]     "pilotErrorCode": 0,
[2026-01-09 15:19:56]     "pilotErrorDiag": "",
[2026-01-09 15:19:56]  *** Listing of results directory ***
[2026-01-09 15:19:56] total 443932
[2026-01-09 15:19:56] -rwx------. 1 boincer umatlas     36322 Jan  8 19:57 runpilot2-wrapper.sh
[2026-01-09 15:19:56] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 19:57 pilot3.tar.gz
[2026-01-09 15:19:56] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 19:57 queuedata.json
[2026-01-09 15:19:56] -rw-r--r--. 1 boincer umatlas       100 Jan  9 09:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 15:19:56] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 09:55 run_atlas
[2026-01-09 15:19:56] -rw-r--r--. 1 boincer umatlas       105 Jan  9 09:55 job.xml
[2026-01-09 15:19:56] -rw-r--r--. 2 boincer umatlas 225685227 Jan  9 09:55 EVNT.47898824._001362.pool.root.1
[2026-01-09 15:19:56] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 09:55 start_atlas.sh
[2026-01-09 15:19:56] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 09:55 shared
[2026-01-09 15:19:56] -rw-r--r--. 2 boincer umatlas    592395 Jan  9 09:55 input.tar.gz
[2026-01-09 15:19:56] -rw-r--r--. 1 boincer umatlas         0 Jan  9 09:55 boinc_lockfile
[2026-01-09 15:19:56] -rw-r--r--. 1 boincer umatlas      2519 Jan  9 09:55 pandaJob.out
[2026-01-09 15:19:56] -rw-------. 1 boincer umatlas        57 Jan  9 09:55 setup.sh.local
[2026-01-09 15:19:56] -rw-------. 1 boincer umatlas    989377 Jan  9 09:56 agis_schedconf.cvmfs.json
[2026-01-09 15:19:56] drwx------. 5 boincer umatlas      4096 Jan  9 09:56 pilot3
[2026-01-09 15:19:56] -rw-r--r--. 1 boincer umatlas      6945 Jan  9 15:10 init_data.xml
[2026-01-09 15:19:56] -rw-------. 1 boincer umatlas 219028607 Jan  9 15:18 HITS.47898826._035150.pool.root.1
[2026-01-09 15:19:56] -rw-r--r--. 1 boincer umatlas       530 Jan  9 15:18 boinc_task_state.xml
[2026-01-09 15:19:56] -rw-------. 1 boincer umatlas      1039 Jan  9 15:19 memory_monitor_summary.json
[2026-01-09 15:19:56] -rw-------. 1 boincer umatlas   1516240 Jan  9 15:19 agis_ddmendpoints.agis.ALL.json
[2026-01-09 15:19:56] -rw-------. 1 boincer umatlas    519435 Jan  9 15:19 log.47898826._035150.job.log.tgz.1
[2026-01-09 15:19:56] -rw-------. 1 boincer umatlas        95 Jan  9 15:19 pilot_heartbeat.json
[2026-01-09 15:19:56] -rw-------. 1 boincer umatlas      7780 Jan  9 15:19 heartbeat.json
[2026-01-09 15:19:56] -rw-r--r--. 1 boincer umatlas        28 Jan  9 15:19 wrapper_checkpoint.txt
[2026-01-09 15:19:56] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 15:19 boinc_mmap_file
[2026-01-09 15:19:56] -rw-------. 1 boincer umatlas       893 Jan  9 15:19 pilotlog.txt
[2026-01-09 15:19:56] -rw-------. 1 boincer umatlas   2464336 Jan  9 15:19 log.47898826._035150.job.log.1
[2026-01-09 15:19:56] -rw-------. 1 boincer umatlas       357 Jan  9 15:19 output.list
[2026-01-09 15:19:56] -rw-r--r--. 1 boincer umatlas       620 Jan  9 15:19 runtime_log
[2026-01-09 15:19:56] -rw-------. 1 boincer umatlas   3000320 Jan  9 15:19 result.tar.gz
[2026-01-09 15:19:56] -rw-r--r--. 1 boincer umatlas      9338 Jan  9 15:19 runtime_log.err
[2026-01-09 15:19:56] -rw-------. 1 boincer umatlas       654 Jan  9 15:19 CZHKDmQzFy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmhmlKDm05IuIo.diag
[2026-01-09 15:19:56] -rw-r--r--. 1 boincer umatlas     21127 Jan  9 15:19 stderr.txt
[2026-01-09 15:19:56] HITS file was successfully produced:
[2026-01-09 15:19:56] -rw-------. 1 boincer umatlas 219028607 Jan  9 15:18 shared/HITS.pool.root.1
[2026-01-09 15:19:56]  *** Contents of shared directory: ***
[2026-01-09 15:19:56] total 437824
[2026-01-09 15:19:56] -rw-r--r--. 2 boincer umatlas 225685227 Jan  9 09:55 ATLAS.root_0
[2026-01-09 15:19:56] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 09:55 start_atlas.sh
[2026-01-09 15:19:56] -rw-r--r--. 2 boincer umatlas    592395 Jan  9 09:55 input.tar.gz
[2026-01-09 15:19:56] -rw-------. 1 boincer umatlas 219028607 Jan  9 15:18 HITS.pool.root.1
[2026-01-09 15:19:56] -rw-------. 1 boincer umatlas   3000320 Jan  9 15:19 result.tar.gz
15:19:57 (3778898): run_atlas exited; CPU time 45724.761512
15:19:57 (3778898): called boinc_finish(0)

</stderr_txt>
]]>

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