Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:52:29 (2033213): wrapper (7.7.26015): starting
16:52:29 (2033213): wrapper: running run_atlas (--nthreads 4)
[2026-01-11 16:52:29] Arguments: --nthreads 4
[2026-01-11 16:52:29] Threads: 4
[2026-01-11 16:52:29] Checking for CVMFS
[2026-01-11 16:52:29] No cvmfs_config command found, will try listing directly
[2026-01-11 16:52:29] CVMFS is ok
[2026-01-11 16:52:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 16:52:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 16:52:29] Further information can be found at the LHC@home message board.
[2026-01-11 16:52:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 16:52:29] Checking for apptainer binary...
[2026-01-11 16:52:29] which: no apptainer in ((null))
[2026-01-11 16:52:29] apptainer is not installed, using version from CVMFS
[2026-01-11 16:52:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 16:52:30] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot104/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2026-01-11 16:52:30] apptainer works
[2026-01-11 16:52:30] Set ATHENA_PROC_NUMBER=4
[2026-01-11 16:52:30] Set ATHENA_CORE_NUMBER=4
[2026-01-11 16:52:30] Starting ATLAS job with PandaID=6963165817
[2026-01-11 16:52:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot104/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 20:42:40]  *** The last 200 lines of the pilot log: ***
[2026-01-11 20:42:40] 2026-01-11 19:34:17,589 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 20:42:40] 2026-01-11 19:34:17,693 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 20:42:40] 2026-01-11 19:34:17,714 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2714.3026874999996
[2026-01-11 20:42:40] 2026-01-11 19:34:17,739 | INFO     | using path: /scratch/boinc/var/slot104/slots/0/PanDA_Pilot-6963165817/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 20:42:40] 2026-01-11 19:34:17,740 | INFO     | extracted standard info from prmon json
[2026-01-11 20:42:40] 2026-01-11 19:34:17,740 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 20:42:40] 2026-01-11 19:34:17,740 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 20:42:40] 2026-01-11 19:34:17,740 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 20:42:40] 2026-01-11 19:34:17,740 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 20:42:40] 2026-01-11 19:34:17,744 | INFO     | fitting pss+swap vs Time
[2026-01-11 20:42:40] 2026-01-11 19:34:17,744 | INFO     | sum of square deviations: 3212467674.5
[2026-01-11 20:42:40] 2026-01-11 19:34:17,746 | INFO     | sum of deviations: 2053035794.5
[2026-01-11 20:42:40] 2026-01-11 19:34:17,746 | INFO     | mean x: 1768153417.5
[2026-01-11 20:42:40] 2026-01-11 19:34:17,746 | INFO     | mean y: 2317724.0963302753
[2026-01-11 20:42:40] 2026-01-11 19:34:17,746 | INFO     | intersect: -1127680340.9768076
[2026-01-11 20:42:40] 2026-01-11 19:34:17,747 | INFO     | chi2: 1.9792334656076478
[2026-01-11 20:42:40] 2026-01-11 19:34:17,747 | INFO     | sum of square deviations: 2996454322.0
[2026-01-11 20:42:40] 2026-01-11 19:34:17,749 | INFO     | sum of deviations: 14338641028.999998
[2026-01-11 20:42:40] 2026-01-11 19:34:17,749 | INFO     | mean x: 1768153265.0
[2026-01-11 20:42:40] 2026-01-11 19:34:17,749 | INFO     | mean y: 2326234.234741784
[2026-01-11 20:42:40] 2026-01-11 19:34:17,749 | INFO     | intersect: -8458645376.427876
[2026-01-11 20:42:40] 2026-01-11 19:34:17,750 | INFO     | chi2: 1.3198048940481986
[2026-01-11 20:42:40] 2026-01-11 19:34:17,750 | INFO     | current chi2=1.3198048940481986 (change=33.317371751138865 %)
[2026-01-11 20:42:40] 2026-01-11 19:34:17,750 | INFO     | sum of square deviations: 2790348132.0
[2026-01-11 20:42:40] 2026-01-11 19:34:17,751 | INFO     | sum of deviations: 13972401634.500002
[2026-01-11 20:42:40] 2026-01-11 19:34:17,752 | INFO     | mean x: 1768153112.5
[2026-01-11 20:42:40] 2026-01-11 19:34:17,752 | INFO     | mean y: 2325963.206730769
[2026-01-11 20:42:40] 2026-01-11 19:34:17,752 | INFO     | intersect: -8851531788.741072
[2026-01-11 20:42:40] 2026-01-11 19:34:17,752 | INFO     | chi2: 1.3204837778857774
[2026-01-11 20:42:40] 2026-01-11 19:34:17,752 | INFO     | current chi2=1.3204837778857774 (change=-0.05143819670925285 %)
[2026-01-11 20:42:40] 2026-01-11 19:34:17,752 | INFO     | right removable region: 207
[2026-01-11 20:42:40] 2026-01-11 19:34:17,753 | INFO     | sum of square deviations: 2996454322.0
[2026-01-11 20:42:40] 2026-01-11 19:34:17,754 | INFO     | sum of deviations: -22139202018.0
[2026-01-11 20:42:40] 2026-01-11 19:34:17,754 | INFO     | mean x: 1768153570.0
[2026-01-11 20:42:40] 2026-01-11 19:34:17,754 | INFO     | mean y: 2334560.8591549294
[2026-01-11 20:42:40] 2026-01-11 19:34:17,754 | INFO     | intersect: 13066277767.8926
[2026-01-11 20:42:40] 2026-01-11 19:34:17,755 | INFO     | chi2: 0.7421443159199219
[2026-01-11 20:42:40] 2026-01-11 19:34:17,755 | INFO     | current chi2=0.7421443159199219 (change=62.50344748025595 %)
[2026-01-11 20:42:40] 2026-01-11 19:34:17,755 | INFO     | sum of square deviations: 2790348132.0
[2026-01-11 20:42:40] 2026-01-11 19:34:17,756 | INFO     | sum of deviations: -19484572572.5
[2026-01-11 20:42:40] 2026-01-11 19:34:17,756 | INFO     | mean x: 1768153722.5
[2026-01-11 20:42:40] 2026-01-11 19:34:17,757 | INFO     | mean y: 2332576.658653846
[2026-01-11 20:42:40] 2026-01-11 19:34:17,757 | INFO     | intersect: 12349078536.523449
[2026-01-11 20:42:40] 2026-01-11 19:34:17,757 | INFO     | chi2: 0.7358445361027177
[2026-01-11 20:42:40] 2026-01-11 19:34:17,757 | INFO     | current chi2=0.7358445361027177 (change=0.8488618294401855 %)
[2026-01-11 20:42:40] 2026-01-11 19:34:17,757 | INFO     | left removable region: 20
[2026-01-11 20:42:40] 2026-01-11 19:34:17,757 | INFO     | sum of square deviations: 2027639878.0
[2026-01-11 20:42:40] 2026-01-11 19:34:17,759 | INFO     | sum of deviations: 2607426029.0000005
[2026-01-11 20:42:40] 2026-01-11 19:34:17,759 | INFO     | mean x: 1768153692.0
[2026-01-11 20:42:40] 2026-01-11 19:34:17,759 | INFO     | mean y: 2333337.4331550803
[2026-01-11 20:42:40] 2026-01-11 19:34:17,759 | INFO     | intersect: -2271408666.6650944
[2026-01-11 20:42:40] 2026-01-11 19:34:17,759 | INFO     | chi2: 0.014377505316642628
[2026-01-11 20:42:40] 2026-01-11 19:34:17,759 | INFO     | current memory leak: 1.29 B/s (using 187 data points, chi2=0.01)
[2026-01-11 20:42:40] 2026-01-11 19:34:17,760 | INFO     | could have reported an average CPU frequency of 2692 MHz (11 samples)
[2026-01-11 20:42:40] 2026-01-11 19:34:17,760 | INFO     | ..............................
[2026-01-11 20:42:40] 2026-01-11 19:34:17,760 | INFO     | . Timing measurements:
[2026-01-11 20:42:40] 2026-01-11 19:34:17,760 | INFO     | . get job = 0 s
[2026-01-11 20:42:40] 2026-01-11 19:34:17,760 | INFO     | . initial setup = 1 s
[2026-01-11 20:42:40] 2026-01-11 19:34:17,760 | INFO     | . payload setup = 8 s
[2026-01-11 20:42:40] 2026-01-11 19:34:17,760 | INFO     | . stage-in = 0 s
[2026-01-11 20:42:40] 2026-01-11 19:34:17,761 | INFO     | . payload execution = 13250 s
[2026-01-11 20:42:40] 2026-01-11 19:34:17,761 | INFO     | . stage-out = 1 s
[2026-01-11 20:42:40] 2026-01-11 19:34:17,761 | INFO     | . log creation = 0 s
[2026-01-11 20:42:40] 2026-01-11 19:34:17,761 | INFO     | ..............................
[2026-01-11 20:42:40] 2026-01-11 19:34:18,025 | INFO     | time since job start (13294s) is within the limit (349056.0s)
[2026-01-11 20:42:40] 2026-01-11 19:34:18,218 | INFO     | 
[2026-01-11 20:42:40] 2026-01-11 19:34:18,218 | INFO     | job summary report
[2026-01-11 20:42:40] 2026-01-11 19:34:18,218 | INFO     | --------------------------------------------------
[2026-01-11 20:42:40] 2026-01-11 19:34:18,219 | INFO     | PanDA job id: 6963165817
[2026-01-11 20:42:40] 2026-01-11 19:34:18,219 | INFO     | task id: 47898826
[2026-01-11 20:42:40] 2026-01-11 19:34:18,219 | INFO     | errors: (none)
[2026-01-11 20:42:40] 2026-01-11 19:34:18,219 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 20:42:40] 2026-01-11 19:34:18,219 | INFO     | pilot state: finished 
[2026-01-11 20:42:40] 2026-01-11 19:34:18,219 | INFO     | transexitcode: 0
[2026-01-11 20:42:40] 2026-01-11 19:34:18,219 | INFO     | exeerrorcode: 0
[2026-01-11 20:42:40] 2026-01-11 19:34:18,219 | INFO     | exeerrordiag: 
[2026-01-11 20:42:40] 2026-01-11 19:34:18,219 | INFO     | exitcode: 0
[2026-01-11 20:42:40] 2026-01-11 19:34:18,219 | INFO     | exitmsg: OK
[2026-01-11 20:42:40] 2026-01-11 19:34:18,219 | INFO     | cpuconsumptiontime: 50732 s
[2026-01-11 20:42:40] 2026-01-11 19:34:18,220 | INFO     | nevents: 400
[2026-01-11 20:42:40] 2026-01-11 19:34:18,220 | INFO     | neventsw: 0
[2026-01-11 20:42:40] 2026-01-11 19:34:18,220 | INFO     | pid: 2045056
[2026-01-11 20:42:40] 2026-01-11 19:34:18,220 | INFO     | pgrp: 2045056
[2026-01-11 20:42:40] 2026-01-11 19:34:18,220 | INFO     | corecount: 4
[2026-01-11 20:42:40] 2026-01-11 19:34:18,220 | INFO     | event service: False
[2026-01-11 20:42:40] 2026-01-11 19:34:18,220 | INFO     | sizes: {0: 2283812, 1: 2284011, 7: 2284273, 11: 2284301, 13263: 2315132, 13265: 2324154, 13266: 2324338, 13275: 2324532}
[2026-01-11 20:42:40] 2026-01-11 19:34:18,220 | INFO     | --------------------------------------------------
[2026-01-11 20:42:40] 2026-01-11 19:34:18,220 | INFO     | 
[2026-01-11 20:42:40] 2026-01-11 19:34:18,220 | INFO     | executing command: ls -lF /scratch/boinc/var/slot104/slots/0
[2026-01-11 20:42:40] 2026-01-11 19:34:18,253 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 20:42:40] 2026-01-11 19:34:18,253 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 20:42:40] 2026-01-11 19:34:18,253 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 20:42:40] 2026-01-11 19:34:18,253 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 20:42:40] 2026-01-11 19:34:18,254 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 20:42:40] 2026-01-11 19:34:18,254 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 20:42:40] 2026-01-11 19:34:18,254 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 20:42:40] 2026-01-11 19:34:18,254 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 20:42:40] 2026-01-11 19:34:18,254 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 20:42:40] 2026-01-11 19:34:18,254 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 20:42:40] 2026-01-11 19:34:18,254 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 20:42:40] 2026-01-11 19:34:18,254 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 20:42:40] 2026-01-11 19:34:18,254 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 20:42:40] 2026-01-11 19:34:18,254 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 20:42:40] 2026-01-11 19:34:18,255 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 20:42:40] 2026-01-11 19:34:18,255 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 20:42:40] 2026-01-11 19:34:18,255 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 20:42:40] 2026-01-11 19:34:18,255 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 20:42:40] 2026-01-11 19:34:18,255 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 20:42:40] 2026-01-11 19:34:18,255 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 20:42:40] 2026-01-11 19:34:18,255 | INFO     | job 6963165817 has completed (purged errors)
[2026-01-11 20:42:40] 2026-01-11 19:34:18,255 | INFO     | overall cleanup function is called
[2026-01-11 20:42:40] 2026-01-11 19:34:19,265 | INFO     | --- collectZombieJob: --- 10, [2045056]
[2026-01-11 20:42:40] 2026-01-11 19:34:19,265 | INFO     | zombie collector waiting for pid 2045056
[2026-01-11 20:42:40] 2026-01-11 19:34:19,265 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 20:42:40] 2026-01-11 19:34:19,265 | INFO     | collected zombie processes
[2026-01-11 20:42:40] 2026-01-11 19:34:19,265 | INFO     | will attempt to kill all subprocesses of pid=2045056
[2026-01-11 20:42:40] 2026-01-11 19:34:20,036 | INFO     | process IDs to be killed: [2045056] (in reverse order)
[2026-01-11 20:42:40] 2026-01-11 19:34:20,288 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 20:42:40] 2026-01-11 19:34:20,289 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 20:42:40] 2026-01-11 19:34:20,321 | INFO     | did not find any defunct processes belonging to 2045056
[2026-01-11 20:42:40] 2026-01-11 19:34:20,357 | INFO     | did not find any defunct processes belonging to 2045056
[2026-01-11 20:42:40] 2026-01-11 19:34:20,357 | INFO     | ready for new job
[2026-01-11 20:42:40] 2026-01-11 19:34:20,358 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 20:42:40] 2026-01-11 19:34:20,360 | INFO     | ***************************************
[2026-01-11 20:42:40] 2026-01-11 19:34:20,360 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 20:42:40] 2026-01-11 19:34:20,361 | INFO     | ***************************************
[2026-01-11 20:42:40] 2026-01-11 19:34:20,361 | INFO     | 
[2026-01-11 20:42:40] 2026-01-11 19:34:20,369 | INFO     | architecture information:
[2026-01-11 20:42:40] 2026-01-11 19:34:20,370 | INFO     | executing command: cat /etc/os-release
[2026-01-11 20:42:40] 2026-01-11 19:34:20,397 | INFO     | cat /etc/os-release:
[2026-01-11 20:42:40] NAME="CentOS Linux"
[2026-01-11 20:42:40] VERSION="7 (Core)"
[2026-01-11 20:42:40] ID="centos"
[2026-01-11 20:42:40] ID_LIKE="rhel fedora"
[2026-01-11 20:42:40] VERSION_ID="7"
[2026-01-11 20:42:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 20:42:40] ANSI_COLOR="0;31"
[2026-01-11 20:42:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 20:42:40] HOME_URL="https://www.centos.org/"
[2026-01-11 20:42:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 20:42:40] 
[2026-01-11 20:42:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 20:42:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 20:42:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 20:42:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 20:42:40] 
[2026-01-11 20:42:40] 2026-01-11 19:34:20,401 | INFO     | ***************************************
[2026-01-11 20:42:40] 2026-01-11 19:34:20,904 | INFO     | executing command: df -mP /scratch/boinc/var/slot104/slots/0
[2026-01-11 20:42:40] 2026-01-11 19:34:20,927 | INFO     | sufficient remaining disk space (3339009916928 B)
[2026-01-11 20:42:40] 2026-01-11 19:34:20,927 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 20:42:40] 2026-01-11 19:34:20,928 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 20:42:40] 2026-01-11 19:34:20,928 | INFO     | update_server=False
[2026-01-11 20:42:40] 2026-01-11 19:34:20,928 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 20:42:40] 2026-01-11 19:34:21,097 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 20:42:40] 2026-01-11 19:34:21,097 | INFO     | aborting loop
[2026-01-11 20:42:40] 2026-01-11 19:34:21,150 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 20:42:40] 2026-01-11 19:34:21,933 | INFO     | [job] retrieve thread has finished
[2026-01-11 20:42:40] 2026-01-11 19:34:21,965 | INFO     | [data] copytool_in thread has finished
[2026-01-11 20:42:40] 2026-01-11 19:34:21,993 | INFO     | all data control threads have been joined
[2026-01-11 20:42:40] 2026-01-11 19:34:22,102 | INFO     | [job] job monitor thread has finished
[2026-01-11 20:42:40] 2026-01-11 19:34:22,166 | INFO     | [payload] failed_post thread has finished
[2026-01-11 20:42:40] 2026-01-11 19:34:22,256 | INFO     | all payload control threads have been joined
[2026-01-11 20:42:40] 2026-01-11 19:34:22,496 | INFO     | [job] validate thread has finished
[2026-01-11 20:42:40] 2026-01-11 19:34:22,556 | INFO     | all job control threads have been joined
[2026-01-11 20:42:40] 2026-01-11 19:34:22,601 | INFO     | [payload] validate_post thread has finished
[2026-01-11 20:42:40] 2026-01-11 19:34:22,665 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 20:42:40] 2026-01-11 19:34:22,696 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 20:42:40] 2026-01-11 19:34:22,830 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 20:42:40] 2026-01-11 19:34:22,872 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 20:42:40] 2026-01-11 19:34:22,999 | INFO     | [data] control thread has finished
[2026-01-11 20:42:40] 2026-01-11 19:34:23,096 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 20:42:40] 2026-01-11 19:34:23,156 | INFO     | [data] copytool_out thread has finished
[2026-01-11 20:42:40] 2026-01-11 19:34:23,262 | INFO     | [payload] control thread has finished
[2026-01-11 20:42:40] 2026-01-11 19:34:23,561 | INFO     | [job] control thread has finished
[2026-01-11 20:42:40] 2026-01-11 19:34:23,726 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 20:42:40] 2026-01-11 19:34:23,877 | INFO     | [job] queue monitor thread has finished
[2026-01-11 20:42:40] 2026-01-11 19:34:27,733 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 20:42:40] 2026-01-11 19:34:52,011 | INFO     | PID=2037598 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 20:42:40] 2026-01-11 19:34:52,012 | INFO     | .. there are 6 such processes running
[2026-01-11 20:42:40] 2026-01-11 19:34:52,012 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 20:42:40] 2026-01-11 19:34:52,013 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 20:42:40] 2026-01-11 19:34:52,013 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 20:42:40] 2026-01-11 19:35:05,124 | INFO     | [monitor] cgroup control has ended
[2026-01-11 20:42:40] 2026-01-11 19:35:06,130 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23040861677376)>', '<ExcThread(monitor, started 23040626759424)>']
[2026-01-11 20:42:40] 2026-01-11 19:35:07,088 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 20:42:40] 2026-01-11 19:35:07,088 | INFO     | [monitor] control thread has ended
[2026-01-11 20:42:40] 2026-01-11 19:35:11,156 | INFO     | all workflow threads have been joined
[2026-01-11 20:42:40] 2026-01-11 19:35:11,156 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 20:42:40] 2026-01-11 19:35:11,156 | INFO     | traces error code: 0
[2026-01-11 20:42:40] 2026-01-11 19:35:11,157 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 20:42:40] 2026-01-11 19:35:11,344 [wrapper] ==== pilot stdout END ====
[2026-01-11 20:42:40] 2026-01-11 19:35:11,346 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 20:42:40] 2026-01-11 19:35:11,348 [wrapper] pilotpid: 2037598
[2026-01-11 20:42:40] 2026-01-11 19:35:11,352 [wrapper] Pilot exit status: 0
[2026-01-11 20:42:40] 2026-01-11 19:35:11,366 [wrapper] pandaids: 6963165817
[2026-01-11 20:42:40] 2026-01-11 19:35:11,546 [wrapper] cleanup supervisor_pilot 2417275 2037599
[2026-01-11 20:42:40] 2026-01-11 19:35:11,550 [wrapper] Test setup, not cleaning
[2026-01-11 20:42:40] 2026-01-11 19:35:11,554 [wrapper] apfmon messages muted
[2026-01-11 20:42:40] 2026-01-11 19:35:11,558 [wrapper] ==== wrapper stdout END ====
[2026-01-11 20:42:40] 2026-01-11 19:35:11,562 [wrapper] ==== wrapper stderr END ====
[2026-01-11 20:42:40]  *** Error codes and diagnostics ***
[2026-01-11 20:42:40]     "exeErrorCode": 0,
[2026-01-11 20:42:40]     "exeErrorDiag": "",
[2026-01-11 20:42:40]     "pilotErrorCode": 0,
[2026-01-11 20:42:40]     "pilotErrorDiag": "",
[2026-01-11 20:42:40]  *** Listing of results directory ***
[2026-01-11 20:42:40] total 437824
[2026-01-11 20:42:40] -rw-r--r-- 1 boinc boinc      5112 Jan  9 01:56 queuedata.json
[2026-01-11 20:42:40] -rwx------ 1 boinc boinc     36322 Jan  9 01:56 runpilot2-wrapper.sh
[2026-01-11 20:42:40] -rw-r--r-- 1 boinc boinc    579449 Jan  9 01:57 pilot3.tar.gz
[2026-01-11 20:42:40] -rw-r--r-- 1 boinc boinc       100 Jan 11 16:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 20:42:40] -rwxr-xr-x 1 boinc boinc      7986 Jan 11 16:52 run_atlas
[2026-01-11 20:42:40] -rw-r--r-- 1 boinc boinc       105 Jan 11 16:52 job.xml
[2026-01-11 20:42:40] -rw-r--r-- 1 boinc boinc      6690 Jan 11 16:52 init_data.xml
[2026-01-11 20:42:40] -rw-r--r-- 2 boinc boinc 225387711 Jan 11 16:52 EVNT.47898824._001353.pool.root.1
[2026-01-11 20:42:40] -rw-r--r-- 2 boinc boinc     15847 Jan 11 16:52 start_atlas.sh
[2026-01-11 20:42:40] drwxrwx--x 2 boinc boinc      4096 Jan 11 16:52 shared
[2026-01-11 20:42:40] -rw-r--r-- 2 boinc boinc    592398 Jan 11 16:52 input.tar.gz
[2026-01-11 20:42:40] -rw-r--r-- 1 boinc boinc         0 Jan 11 16:52 boinc_lockfile
[2026-01-11 20:42:40] -rw-r--r-- 1 boinc boinc      2520 Jan 11 16:52 pandaJob.out
[2026-01-11 20:42:40] -rw------- 1 boinc boinc    989556 Jan 11 16:52 agis_schedconf.cvmfs.json
[2026-01-11 20:42:40] drwx------ 5 boinc boinc      4096 Jan 11 16:52 pilot3
[2026-01-11 20:42:40] -rw------- 1 boinc boinc 214566085 Jan 11 20:33 HITS.47898826._034930.pool.root.1
[2026-01-11 20:42:40] -rw-r--r-- 1 boinc boinc       528 Jan 11 20:33 boinc_task_state.xml
[2026-01-11 20:42:40] -rw------- 1 boinc boinc      1027 Jan 11 20:34 memory_monitor_summary.json
[2026-01-11 20:42:40] -rw------- 1 boinc boinc   1516240 Jan 11 20:34 agis_ddmendpoints.agis.ALL.json
[2026-01-11 20:42:40] -rw------- 1 boinc boinc    384704 Jan 11 20:34 log.47898826._034930.job.log.tgz.1
[2026-01-11 20:42:40] -rw------- 1 boinc boinc      7783 Jan 11 20:34 heartbeat.json
[2026-01-11 20:42:40] -rw------- 1 boinc boinc        95 Jan 11 20:34 pilot_heartbeat.json
[2026-01-11 20:42:40] -rw------- 1 boinc boinc      4835 Jan 11 20:35 pilotlog.txt
[2026-01-11 20:42:40] -rw------- 1 boinc boinc   1844834 Jan 11 20:35 log.47898826._034930.job.log.1
[2026-01-11 20:42:40] -rw------- 1 boinc boinc       357 Jan 11 20:35 output.list
[2026-01-11 20:42:40] -rw-r--r-- 1 boinc boinc       620 Jan 11 20:35 runtime_log
[2026-01-11 20:42:40] -rw------- 1 boinc boinc   2252800 Jan 11 20:35 result.tar.gz
[2026-01-11 20:42:40] -rw-r--r-- 1 boinc boinc      9223 Jan 11 20:35 runtime_log.err
[2026-01-11 20:42:40] -rw------- 1 boinc boinc       666 Jan 11 20:35 fD6LDmEzFy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm4VgKDm14sium.diag
[2026-01-11 20:42:40] -rw-r--r-- 1 boinc boinc        26 Jan 11 20:42 wrapper_checkpoint.txt
[2026-01-11 20:42:40] -rw-r--r-- 1 boinc boinc      8192 Jan 11 20:42 boinc_mmap_file
[2026-01-11 20:42:40] -rw-r--r-- 1 boinc boinc     20917 Jan 11 20:42 stderr.txt
[2026-01-11 20:42:40] HITS file was successfully produced:
[2026-01-11 20:42:40] -rw------- 1 boinc boinc 214566085 Jan 11 20:33 shared/HITS.pool.root.1
[2026-01-11 20:42:40]  *** Contents of shared directory: ***
[2026-01-11 20:42:40] total 432452
[2026-01-11 20:42:40] -rw-r--r-- 2 boinc boinc 225387711 Jan 11 16:52 ATLAS.root_0
[2026-01-11 20:42:40] -rw-r--r-- 2 boinc boinc     15847 Jan 11 16:52 start_atlas.sh
[2026-01-11 20:42:40] -rw-r--r-- 2 boinc boinc    592398 Jan 11 16:52 input.tar.gz
[2026-01-11 20:42:40] -rw------- 1 boinc boinc 214566085 Jan 11 20:33 HITS.pool.root.1
[2026-01-11 20:42:40] -rw------- 1 boinc boinc   2252800 Jan 11 20:35 result.tar.gz
20:42:41 (2033213): run_atlas exited; CPU time 51597.725165
20:42:41 (2033213): called boinc_finish(0)

</stderr_txt>
]]>

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