Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:42:50 (2446588): wrapper (7.7.26015): starting
20:42:50 (2446588): wrapper: running run_atlas (--nthreads 4)
[2026-01-11 20:42:50] Arguments: --nthreads 4
[2026-01-11 20:42:50] Threads: 4
[2026-01-11 20:42:50] Checking for CVMFS
[2026-01-11 20:42:50] No cvmfs_config command found, will try listing directly
[2026-01-11 20:42:50] CVMFS is ok
[2026-01-11 20:42:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 20:42:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 20:42:50] Further information can be found at the LHC@home message board.
[2026-01-11 20:42:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 20:42:50] Checking for apptainer binary...
[2026-01-11 20:42:50] which: no apptainer in ((null))
[2026-01-11 20:42:50] apptainer is not installed, using version from CVMFS
[2026-01-11 20:42:50] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 20:42:50] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot104/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2026-01-11 20:42:50] apptainer works
[2026-01-11 20:42:50] Set ATHENA_PROC_NUMBER=4
[2026-01-11 20:42:50] Set ATHENA_CORE_NUMBER=4
[2026-01-11 20:42:50] Starting ATLAS job with PandaID=6963166809
[2026-01-11 20:42:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot104/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 00:30:05]  *** The last 200 lines of the pilot log: ***
[2026-01-12 00:30:05] 2026-01-11 23:05:42,160 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-12 00:30:05] 2026-01-11 23:05:43,910 | INFO     | time since job start (12158s) is within the limit (349056.0s)
[2026-01-12 00:30:05] 2026-01-11 23:05:44,157 | INFO     | monitor loop #837: job 0:6963166809 is in state 'finished'
[2026-01-12 00:30:05] 2026-01-11 23:05:44,157 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 00:30:05] 2026-01-11 23:05:45,919 | INFO     | time since job start (12160s) is within the limit (349056.0s)
[2026-01-12 00:30:05] 2026-01-11 23:05:46,661 | INFO     | monitor loop #838: job 0:6963166809 is in state 'finished'
[2026-01-12 00:30:05] 2026-01-11 23:05:46,661 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 00:30:05] 2026-01-11 23:05:47,924 | INFO     | time since job start (12162s) is within the limit (349056.0s)
[2026-01-12 00:30:05] 2026-01-11 23:05:47,991 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-12 00:30:05] 2026-01-11 23:05:48,013 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2738.2437343750007
[2026-01-12 00:30:05] 2026-01-11 23:05:48,036 | INFO     | using path: /scratch/boinc/var/slot104/slots/0/PanDA_Pilot-6963166809/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 00:30:05] 2026-01-11 23:05:48,037 | INFO     | extracted standard info from prmon json
[2026-01-12 00:30:05] 2026-01-11 23:05:48,037 | INFO     | extracted standard memory fields from prmon json
[2026-01-12 00:30:05] 2026-01-11 23:05:48,037 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-12 00:30:05] 2026-01-11 23:05:48,038 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-12 00:30:05] 2026-01-11 23:05:48,038 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-12 00:30:05] 2026-01-11 23:05:48,042 | INFO     | fitting pss+swap vs Time
[2026-01-12 00:30:05] 2026-01-11 23:05:48,042 | INFO     | sum of square deviations: 2443580700.0
[2026-01-12 00:30:05] 2026-01-11 23:05:48,043 | INFO     | sum of deviations: -528205831.9999989
[2026-01-12 00:30:05] 2026-01-11 23:05:48,043 | INFO     | mean x: 1768166658.0
[2026-01-12 00:30:05] 2026-01-11 23:05:48,043 | INFO     | mean y: 2348846.326633166
[2026-01-12 00:30:05] 2026-01-11 23:05:48,044 | INFO     | intersect: 384556784.3347978
[2026-01-12 00:30:05] 2026-01-11 23:05:48,044 | INFO     | chi2: 1.245085164988967
[2026-01-12 00:30:05] 2026-01-11 23:05:48,044 | INFO     | sum of square deviations: 2263977332.5
[2026-01-12 00:30:05] 2026-01-11 23:05:48,046 | INFO     | sum of deviations: -610506818.5000058
[2026-01-12 00:30:05] 2026-01-11 23:05:48,046 | INFO     | mean x: 1768166505.5
[2026-01-12 00:30:05] 2026-01-11 23:05:48,046 | INFO     | mean y: 2348776.6134020616
[2026-01-12 00:30:05] 2026-01-11 23:05:48,046 | INFO     | intersect: 479154658.17188185
[2026-01-12 00:30:05] 2026-01-11 23:05:48,046 | INFO     | chi2: 1.2448522603640189
[2026-01-12 00:30:05] 2026-01-11 23:05:48,046 | INFO     | current chi2=1.2448522603640189 (change=0.01870591920112833 %)
[2026-01-12 00:30:05] 2026-01-11 23:05:48,046 | INFO     | right removable region: 193
[2026-01-12 00:30:05] 2026-01-11 23:05:48,047 | INFO     | sum of square deviations: 2263977332.5
[2026-01-12 00:30:05] 2026-01-11 23:05:48,048 | INFO     | sum of deviations: -21157767436.5
[2026-01-12 00:30:05] 2026-01-11 23:05:48,048 | INFO     | mean x: 1768166810.5
[2026-01-12 00:30:05] 2026-01-11 23:05:48,048 | INFO     | mean y: 2366087.087628866
[2026-01-12 00:30:05] 2026-01-11 23:05:48,048 | INFO     | intersect: 16526587256.82276
[2026-01-12 00:30:05] 2026-01-11 23:05:48,048 | INFO     | chi2: 0.09171941310960151
[2026-01-12 00:30:05] 2026-01-11 23:05:48,048 | INFO     | current chi2=0.09171941310960151 (change=92.63348277782956 %)
[2026-01-12 00:30:05] 2026-01-11 23:05:48,049 | INFO     | sum of square deviations: 2093397390.0
[2026-01-12 00:30:05] 2026-01-11 23:05:48,050 | INFO     | sum of deviations: -18441560991.999996
[2026-01-12 00:30:05] 2026-01-11 23:05:48,050 | INFO     | mean x: 1768166963.0
[2026-01-12 00:30:05] 2026-01-11 23:05:48,050 | INFO     | mean y: 2363641.7724867724
[2026-01-12 00:30:05] 2026-01-11 23:05:48,050 | INFO     | intersect: 15578841881.388475
[2026-01-12 00:30:05] 2026-01-11 23:05:48,050 | INFO     | chi2: 0.08797809227337694
[2026-01-12 00:30:05] 2026-01-11 23:05:48,050 | INFO     | current chi2=0.08797809227337694 (change=4.079093737498974 %)
[2026-01-12 00:30:05] 2026-01-11 23:05:48,050 | INFO     | left removable region: 20
[2026-01-12 00:30:05] 2026-01-11 23:05:48,051 | INFO     | sum of square deviations: 1605470102.0
[2026-01-12 00:30:05] 2026-01-11 23:05:48,052 | INFO     | sum of deviations: -9644402071.999992
[2026-01-12 00:30:05] 2026-01-11 23:05:48,052 | INFO     | mean x: 1768167085.0
[2026-01-12 00:30:05] 2026-01-11 23:05:48,052 | INFO     | mean y: 2355346.5260115606
[2026-01-12 00:30:05] 2026-01-11 23:05:48,052 | INFO     | intersect: 10624112971.89236
[2026-01-12 00:30:05] 2026-01-11 23:05:48,052 | INFO     | chi2: 0.06501341511559558
[2026-01-12 00:30:05] 2026-01-11 23:05:48,052 | INFO     | current memory leak: -6.01 B/s (using 173 data points, chi2=0.07)
[2026-01-12 00:30:05] 2026-01-11 23:05:48,053 | INFO     | could have reported an average CPU frequency of 2729 MHz (10 samples)
[2026-01-12 00:30:05] 2026-01-11 23:05:48,053 | INFO     | ..............................
[2026-01-12 00:30:05] 2026-01-11 23:05:48,053 | INFO     | . Timing measurements:
[2026-01-12 00:30:05] 2026-01-11 23:05:48,053 | INFO     | . get job = 0 s
[2026-01-12 00:30:05] 2026-01-11 23:05:48,053 | INFO     | . initial setup = 1 s
[2026-01-12 00:30:05] 2026-01-11 23:05:48,053 | INFO     | . payload setup = 8 s
[2026-01-12 00:30:05] 2026-01-11 23:05:48,053 | INFO     | . stage-in = 0 s
[2026-01-12 00:30:05] 2026-01-11 23:05:48,053 | INFO     | . payload execution = 12120 s
[2026-01-12 00:30:05] 2026-01-11 23:05:48,053 | INFO     | . stage-out = 1 s
[2026-01-12 00:30:05] 2026-01-11 23:05:48,053 | INFO     | . log creation = 0 s
[2026-01-12 00:30:05] 2026-01-11 23:05:48,053 | INFO     | ..............................
[2026-01-12 00:30:05] 2026-01-11 23:05:48,180 | INFO     | 
[2026-01-12 00:30:05] 2026-01-11 23:05:48,181 | INFO     | job summary report
[2026-01-12 00:30:05] 2026-01-11 23:05:48,181 | INFO     | --------------------------------------------------
[2026-01-12 00:30:05] 2026-01-11 23:05:48,181 | INFO     | PanDA job id: 6963166809
[2026-01-12 00:30:05] 2026-01-11 23:05:48,181 | INFO     | task id: 47898826
[2026-01-12 00:30:05] 2026-01-11 23:05:48,181 | INFO     | errors: (none)
[2026-01-12 00:30:05] 2026-01-11 23:05:48,181 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-12 00:30:05] 2026-01-11 23:05:48,181 | INFO     | pilot state: finished 
[2026-01-12 00:30:05] 2026-01-11 23:05:48,181 | INFO     | transexitcode: 0
[2026-01-12 00:30:05] 2026-01-11 23:05:48,181 | INFO     | exeerrorcode: 0
[2026-01-12 00:30:05] 2026-01-11 23:05:48,181 | INFO     | exeerrordiag: 
[2026-01-12 00:30:05] 2026-01-11 23:05:48,181 | INFO     | exitcode: 0
[2026-01-12 00:30:05] 2026-01-11 23:05:48,182 | INFO     | exitmsg: OK
[2026-01-12 00:30:05] 2026-01-11 23:05:48,182 | INFO     | cpuconsumptiontime: 46769 s
[2026-01-12 00:30:05] 2026-01-11 23:05:48,182 | INFO     | nevents: 400
[2026-01-12 00:30:05] 2026-01-11 23:05:48,182 | INFO     | neventsw: 0
[2026-01-12 00:30:05] 2026-01-11 23:05:48,182 | INFO     | pid: 2469186
[2026-01-12 00:30:05] 2026-01-11 23:05:48,182 | INFO     | pgrp: 2469186
[2026-01-12 00:30:05] 2026-01-11 23:05:48,182 | INFO     | corecount: 4
[2026-01-12 00:30:05] 2026-01-11 23:05:48,182 | INFO     | event service: False
[2026-01-12 00:30:05] 2026-01-11 23:05:48,182 | INFO     | sizes: {0: 2283983, 7: 2284245, 11: 2284273, 12133: 2314464, 12134: 2323486, 12137: 2323542, 12145: 2323864}
[2026-01-12 00:30:05] 2026-01-11 23:05:48,182 | INFO     | --------------------------------------------------
[2026-01-12 00:30:05] 2026-01-11 23:05:48,183 | INFO     | 
[2026-01-12 00:30:05] 2026-01-11 23:05:48,183 | INFO     | executing command: ls -lF /scratch/boinc/var/slot104/slots/0
[2026-01-12 00:30:05] 2026-01-11 23:05:48,213 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-12 00:30:05] 2026-01-11 23:05:48,214 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-12 00:30:05] 2026-01-11 23:05:48,214 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-12 00:30:05] 2026-01-11 23:05:48,214 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-12 00:30:05] 2026-01-11 23:05:48,214 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-12 00:30:05] 2026-01-11 23:05:48,214 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-12 00:30:05] 2026-01-11 23:05:48,214 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-12 00:30:05] 2026-01-11 23:05:48,214 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-12 00:30:05] 2026-01-11 23:05:48,214 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-12 00:30:05] 2026-01-11 23:05:48,214 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-12 00:30:05] 2026-01-11 23:05:48,214 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-12 00:30:05] 2026-01-11 23:05:48,215 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-12 00:30:05] 2026-01-11 23:05:48,215 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-12 00:30:05] 2026-01-11 23:05:48,215 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-12 00:30:05] 2026-01-11 23:05:48,215 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-12 00:30:05] 2026-01-11 23:05:48,215 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-12 00:30:05] 2026-01-11 23:05:48,215 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-12 00:30:05] 2026-01-11 23:05:48,215 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-12 00:30:05] 2026-01-11 23:05:48,215 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-12 00:30:05] 2026-01-11 23:05:48,215 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-12 00:30:05] 2026-01-11 23:05:48,215 | INFO     | job 6963166809 has completed (purged errors)
[2026-01-12 00:30:05] 2026-01-11 23:05:48,216 | INFO     | overall cleanup function is called
[2026-01-12 00:30:05] 2026-01-11 23:05:49,224 | INFO     | --- collectZombieJob: --- 10, [2469186]
[2026-01-12 00:30:05] 2026-01-11 23:05:49,224 | INFO     | zombie collector waiting for pid 2469186
[2026-01-12 00:30:05] 2026-01-11 23:05:49,224 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-12 00:30:05] 2026-01-11 23:05:49,225 | INFO     | collected zombie processes
[2026-01-12 00:30:05] 2026-01-11 23:05:49,225 | INFO     | will attempt to kill all subprocesses of pid=2469186
[2026-01-12 00:30:05] 2026-01-11 23:05:49,867 | INFO     | process IDs to be killed: [2469186] (in reverse order)
[2026-01-12 00:30:05] 2026-01-11 23:05:50,104 | WARNING  | found no corresponding commands to process id(s)
[2026-01-12 00:30:05] 2026-01-11 23:05:50,105 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-12 00:30:05] 2026-01-11 23:05:50,134 | INFO     | did not find any defunct processes belonging to 2469186
[2026-01-12 00:30:05] 2026-01-11 23:05:50,161 | INFO     | did not find any defunct processes belonging to 2469186
[2026-01-12 00:30:05] 2026-01-11 23:05:50,161 | INFO     | ready for new job
[2026-01-12 00:30:05] 2026-01-11 23:05:50,161 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-12 00:30:05] 2026-01-11 23:05:50,164 | INFO     | ***************************************
[2026-01-12 00:30:05] 2026-01-11 23:05:50,164 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-12 00:30:05] 2026-01-11 23:05:50,164 | INFO     | ***************************************
[2026-01-12 00:30:05] 2026-01-11 23:05:50,164 | INFO     | 
[2026-01-12 00:30:05] 2026-01-11 23:05:50,172 | INFO     | architecture information:
[2026-01-12 00:30:05] 2026-01-11 23:05:50,173 | INFO     | executing command: cat /etc/os-release
[2026-01-12 00:30:05] 2026-01-11 23:05:50,198 | INFO     | cat /etc/os-release:
[2026-01-12 00:30:05] NAME="CentOS Linux"
[2026-01-12 00:30:05] VERSION="7 (Core)"
[2026-01-12 00:30:05] ID="centos"
[2026-01-12 00:30:05] ID_LIKE="rhel fedora"
[2026-01-12 00:30:05] VERSION_ID="7"
[2026-01-12 00:30:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-12 00:30:05] ANSI_COLOR="0;31"
[2026-01-12 00:30:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-12 00:30:05] HOME_URL="https://www.centos.org/"
[2026-01-12 00:30:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-12 00:30:05] 
[2026-01-12 00:30:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-12 00:30:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-12 00:30:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-12 00:30:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-12 00:30:05] 
[2026-01-12 00:30:05] 2026-01-11 23:05:50,198 | INFO     | ***************************************
[2026-01-12 00:30:05] 2026-01-11 23:05:50,701 | INFO     | executing command: df -mP /scratch/boinc/var/slot104/slots/0
[2026-01-12 00:30:05] 2026-01-11 23:05:50,727 | INFO     | sufficient remaining disk space (3364630822912 B)
[2026-01-12 00:30:05] 2026-01-11 23:05:50,727 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-12 00:30:05] 2026-01-11 23:05:50,728 | INFO     | current server update state: UPDATING_FINAL
[2026-01-12 00:30:05] 2026-01-11 23:05:50,728 | INFO     | update_server=False
[2026-01-12 00:30:05] 2026-01-11 23:05:50,728 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-12 00:30:05] 2026-01-11 23:05:50,728 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 00:30:05] 2026-01-11 23:05:50,729 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 00:30:05] 2026-01-11 23:05:50,729 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 00:30:05] 2026-01-11 23:05:50,729 | INFO     | aborting loop
[2026-01-12 00:30:05] 2026-01-11 23:05:50,730 | INFO     | all job control threads have been joined
[2026-01-12 00:30:05] 2026-01-11 23:05:51,733 | INFO     | [job] retrieve thread has finished
[2026-01-12 00:30:05] 2026-01-11 23:05:51,736 | INFO     | [job] control thread has finished
[2026-01-12 00:30:05] 2026-01-11 23:05:51,736 | INFO     | [job] job monitor thread has finished
[2026-01-12 00:30:05] 2026-01-11 23:05:51,744 | INFO     | all data control threads have been joined
[2026-01-12 00:30:05] 2026-01-11 23:05:52,053 | INFO     | [data] copytool_in thread has finished
[2026-01-12 00:30:05] 2026-01-11 23:05:52,134 | INFO     | all payload control threads have been joined
[2026-01-12 00:30:05] 2026-01-11 23:05:52,173 | INFO     | [job] validate thread has finished
[2026-01-12 00:30:05] 2026-01-11 23:05:52,440 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 00:30:05] 2026-01-11 23:05:52,736 | INFO     | [data] copytool_out thread has finished
[2026-01-12 00:30:05] 2026-01-11 23:05:52,751 | INFO     | [data] control thread has finished
[2026-01-12 00:30:05] 2026-01-11 23:05:52,779 | INFO     | [payload] validate_post thread has finished
[2026-01-12 00:30:05] 2026-01-11 23:05:52,899 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 00:30:05] 2026-01-11 23:05:53,137 | INFO     | [payload] control thread has finished
[2026-01-12 00:30:05] 2026-01-11 23:05:53,154 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 00:30:05] 2026-01-11 23:05:53,158 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 00:30:05] 2026-01-11 23:05:53,209 | INFO     | [payload] failed_post thread has finished
[2026-01-12 00:30:05] 2026-01-11 23:05:54,163 | INFO     | [job] queue monitor thread has finished
[2026-01-12 00:30:05] 2026-01-11 23:05:54,736 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 00:30:05] 2026-01-11 23:06:00,993 | INFO     | job.realtimelogging is not enabled
[2026-01-12 00:30:05] 2026-01-11 23:06:01,998 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 00:30:05] 2026-01-11 23:06:21,955 | INFO     | PID=2453985 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-12 00:30:05] 2026-01-11 23:06:21,955 | INFO     | .. there are 5 such processes running
[2026-01-12 00:30:05] 2026-01-11 23:06:21,955 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 00:30:05] 2026-01-11 23:06:21,955 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 00:30:05] 2026-01-11 23:06:21,955 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 00:30:05] 2026-01-11 23:06:23,910 | INFO     | [monitor] cgroup control has ended
[2026-01-12 00:30:05] 2026-01-11 23:06:24,409 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22662829680448)>', '<ExcThread(monitor, started 22662384428800)>']
[2026-01-12 00:30:05] 2026-01-11 23:06:24,965 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 00:30:05] 2026-01-11 23:06:24,966 | INFO     | [monitor] control thread has ended
[2026-01-12 00:30:05] 2026-01-11 23:06:29,428 | INFO     | all workflow threads have been joined
[2026-01-12 00:30:05] 2026-01-11 23:06:29,428 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 00:30:05] 2026-01-11 23:06:29,428 | INFO     | traces error code: 0
[2026-01-12 00:30:05] 2026-01-11 23:06:29,428 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 00:30:05] 2026-01-11 23:06:29,572 [wrapper] ==== pilot stdout END ====
[2026-01-12 00:30:05] 2026-01-11 23:06:29,575 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 00:30:05] 2026-01-11 23:06:29,579 [wrapper] pilotpid: 2453985
[2026-01-12 00:30:05] 2026-01-11 23:06:29,582 [wrapper] Pilot exit status: 0
[2026-01-12 00:30:05] 2026-01-11 23:06:29,597 [wrapper] pandaids: 6963166809
[2026-01-12 00:30:05] 2026-01-11 23:06:29,762 [wrapper] cleanup supervisor_pilot 2724294 2453986
[2026-01-12 00:30:05] 2026-01-11 23:06:29,767 [wrapper] Test setup, not cleaning
[2026-01-12 00:30:05] 2026-01-11 23:06:29,771 [wrapper] apfmon messages muted
[2026-01-12 00:30:05] 2026-01-11 23:06:29,776 [wrapper] ==== wrapper stdout END ====
[2026-01-12 00:30:05] 2026-01-11 23:06:29,780 [wrapper] ==== wrapper stderr END ====
[2026-01-12 00:30:05]  *** Error codes and diagnostics ***
[2026-01-12 00:30:05]     "exeErrorCode": 0,
[2026-01-12 00:30:05]     "exeErrorDiag": "",
[2026-01-12 00:30:05]     "pilotErrorCode": 0,
[2026-01-12 00:30:05]     "pilotErrorDiag": "",
[2026-01-12 00:30:05]  *** Listing of results directory ***
[2026-01-12 00:30:05] total 439744
[2026-01-12 00:30:05] -rwx------ 1 boinc boinc     36322 Jan  9 01:57 runpilot2-wrapper.sh
[2026-01-12 00:30:05] -rw-r--r-- 1 boinc boinc    579449 Jan  9 01:57 pilot3.tar.gz
[2026-01-12 00:30:05] -rw-r--r-- 1 boinc boinc      5112 Jan  9 01:57 queuedata.json
[2026-01-12 00:30:05] -rw-r--r-- 1 boinc boinc       100 Jan 11 20:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 00:30:05] -rwxr-xr-x 1 boinc boinc      7986 Jan 11 20:42 run_atlas
[2026-01-12 00:30:05] -rw-r--r-- 1 boinc boinc       105 Jan 11 20:42 job.xml
[2026-01-12 00:30:05] -rw-r--r-- 2 boinc boinc 222833378 Jan 11 20:42 EVNT.47898824._001364.pool.root.1
[2026-01-12 00:30:05] -rw-r--r-- 1 boinc boinc      6690 Jan 11 20:42 init_data.xml
[2026-01-12 00:30:05] drwxrwx--x 2 boinc boinc      4096 Jan 11 20:42 shared
[2026-01-12 00:30:05] -rw-r--r-- 2 boinc boinc    592390 Jan 11 20:42 input.tar.gz
[2026-01-12 00:30:05] -rw-r--r-- 2 boinc boinc     15847 Jan 11 20:42 start_atlas.sh
[2026-01-12 00:30:05] -rw-r--r-- 1 boinc boinc         0 Jan 11 20:42 boinc_lockfile
[2026-01-12 00:30:05] -rw-r--r-- 1 boinc boinc      2520 Jan 11 20:42 pandaJob.out
[2026-01-12 00:30:05] -rw------- 1 boinc boinc    989946 Jan 11 20:43 agis_schedconf.cvmfs.json
[2026-01-12 00:30:05] drwx------ 5 boinc boinc      4096 Jan 11 20:43 pilot3
[2026-01-12 00:30:05] -rw------- 1 boinc boinc 219393311 Jan 12 00:05 HITS.47898826._035215.pool.root.1
[2026-01-12 00:30:05] -rw-r--r-- 1 boinc boinc       528 Jan 12 00:05 boinc_task_state.xml
[2026-01-12 00:30:05] -rw------- 1 boinc boinc        95 Jan 12 00:05 pilot_heartbeat.json
[2026-01-12 00:30:05] -rw------- 1 boinc boinc      1029 Jan 12 00:05 memory_monitor_summary.json
[2026-01-12 00:30:05] -rw------- 1 boinc boinc   1516240 Jan 12 00:05 agis_ddmendpoints.agis.ALL.json
[2026-01-12 00:30:05] -rw------- 1 boinc boinc    378141 Jan 12 00:05 log.47898826._035215.job.log.tgz.1
[2026-01-12 00:30:05] -rw------- 1 boinc boinc      7786 Jan 12 00:05 heartbeat.json
[2026-01-12 00:30:05] -rw------- 1 boinc boinc      4907 Jan 12 00:06 pilotlog.txt
[2026-01-12 00:30:05] -rw------- 1 boinc boinc   1697041 Jan 12 00:06 log.47898826._035215.job.log.1
[2026-01-12 00:30:05] -rw------- 1 boinc boinc       357 Jan 12 00:06 output.list
[2026-01-12 00:30:05] -rw-r--r-- 1 boinc boinc       620 Jan 12 00:06 runtime_log
[2026-01-12 00:30:05] -rw------- 1 boinc boinc   2099200 Jan 12 00:06 result.tar.gz
[2026-01-12 00:30:05] -rw-r--r-- 1 boinc boinc      9223 Jan 12 00:06 runtime_log.err
[2026-01-12 00:30:05] -rw------- 1 boinc boinc       666 Jan 12 00:06 FFdKDmQzFy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmbXgKDmXxDMDn.diag
[2026-01-12 00:30:05] -rw-r--r-- 1 boinc boinc        26 Jan 12 00:29 wrapper_checkpoint.txt
[2026-01-12 00:30:05] -rw-r--r-- 1 boinc boinc      8192 Jan 12 00:30 boinc_mmap_file
[2026-01-12 00:30:05] -rw-r--r-- 1 boinc boinc     21194 Jan 12 00:30 stderr.txt
[2026-01-12 00:30:05] HITS file was successfully produced:
[2026-01-12 00:30:05] -rw------- 1 boinc boinc 219393311 Jan 12 00:05 shared/HITS.pool.root.1
[2026-01-12 00:30:05]  *** Contents of shared directory: ***
[2026-01-12 00:30:05] total 434520
[2026-01-12 00:30:05] -rw-r--r-- 2 boinc boinc 222833378 Jan 11 20:42 ATLAS.root_0
[2026-01-12 00:30:05] -rw-r--r-- 2 boinc boinc    592390 Jan 11 20:42 input.tar.gz
[2026-01-12 00:30:05] -rw-r--r-- 2 boinc boinc     15847 Jan 11 20:42 start_atlas.sh
[2026-01-12 00:30:05] -rw------- 1 boinc boinc 219393311 Jan 12 00:05 HITS.pool.root.1
[2026-01-12 00:30:05] -rw------- 1 boinc boinc   2099200 Jan 12 00:06 result.tar.gz
00:30:06 (2446588): run_atlas exited; CPU time 47570.121602
00:30:06 (2446588): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN