Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
20:33:11 (1852844): wrapper (7.7.26015): starting
20:33:11 (1852844): wrapper: running run_atlas (--nthreads 4)
[2026-01-09 20:33:11] Arguments: --nthreads 4
[2026-01-09 20:33:11] Threads: 4
[2026-01-09 20:33:11] Checking for CVMFS
[2026-01-09 20:33:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 20:33:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 20:33:12] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 20:33:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 20:33:12] 2.13.1.0 509021 1737 95252 154955 0 187 10140222 10240001 1768 130560 0 3182243 99.995 64757 325 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2026-01-09 20:33:12] CVMFS is ok
[2026-01-09 20:33:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 20:33:12] Checking for apptainer binary...
[2026-01-09 20:33:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 20:33:12] Running /usr/bin/apptainer --version
[2026-01-09 20:33:12] apptainer version 1.4.4
[2026-01-09 20:33:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 20:33:12] peachesvl
[2026-01-09 20:33:12] apptainer works
[2026-01-09 20:33:12] Set ATHENA_PROC_NUMBER=4
[2026-01-09 20:33:12] Set ATHENA_CORE_NUMBER=4
[2026-01-09 20:33:12] Starting ATLAS job with PandaID=6963165516
[2026-01-09 20:33:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 22:26:43]  *** The last 200 lines of the pilot log: ***
[2026-01-09 22:26:43] 2026-01-09 21:26:19,794 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 22:26:43] 2026-01-09 21:26:19,930 | INFO     | time since job start (6772s) is within the limit (349056.0s)
[2026-01-09 22:26:43] 2026-01-09 21:26:21,935 | INFO     | time since job start (6774s) is within the limit (349056.0s)
[2026-01-09 22:26:43] 2026-01-09 21:26:22,298 | INFO     | monitor loop #505: job 0:6963165516 is in state 'finished'
[2026-01-09 22:26:43] 2026-01-09 21:26:22,298 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 22:26:43] 2026-01-09 21:26:23,941 | INFO     | time since job start (6776s) is within the limit (349056.0s)
[2026-01-09 22:26:43] 2026-01-09 21:26:24,166 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 22:26:43] 2026-01-09 21:26:24,168 | INFO     | found 24 cores (12 cores per socket, 2 sockets) , CPU MHz: 3700.0399999999986
[2026-01-09 22:26:43] 2026-01-09 21:26:24,170 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/4/PanDA_Pilot-6963165516/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 22:26:43] 2026-01-09 21:26:24,170 | INFO     | extracted standard info from prmon json
[2026-01-09 22:26:43] 2026-01-09 21:26:24,170 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 22:26:43] 2026-01-09 21:26:24,171 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 22:26:43] 2026-01-09 21:26:24,171 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 22:26:43] 2026-01-09 21:26:24,171 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 22:26:43] 2026-01-09 21:26:24,172 | INFO     | fitting pss+swap vs Time
[2026-01-09 22:26:43] 2026-01-09 21:26:24,173 | INFO     | sum of square deviations: 424045160.0
[2026-01-09 22:26:43] 2026-01-09 21:26:24,173 | INFO     | sum of deviations: 5014148881.999999
[2026-01-09 22:26:43] 2026-01-09 21:26:24,173 | INFO     | mean x: 1767990596.0
[2026-01-09 22:26:43] 2026-01-09 21:26:24,173 | INFO     | mean y: 2347621.972972973
[2026-01-09 22:26:43] 2026-01-09 21:26:24,173 | INFO     | intersect: -20903369284.028057
[2026-01-09 22:26:43] 2026-01-09 21:26:24,173 | INFO     | chi2: 1.864715496714878
[2026-01-09 22:26:43] 2026-01-09 21:26:24,173 | INFO     | sum of square deviations: 369281342.5
[2026-01-09 22:26:43] 2026-01-09 21:26:24,174 | INFO     | sum of deviations: 4871972247.499999
[2026-01-09 22:26:43] 2026-01-09 21:26:24,174 | INFO     | mean x: 1767990443.5
[2026-01-09 22:26:43] 2026-01-09 21:26:24,174 | INFO     | mean y: 2347238.7641509436
[2026-01-09 22:26:43] 2026-01-09 21:26:24,174 | INFO     | intersect: -23322958925.538517
[2026-01-09 22:26:43] 2026-01-09 21:26:24,174 | INFO     | chi2: 1.8677300306179896
[2026-01-09 22:26:43] 2026-01-09 21:26:24,174 | INFO     | current chi2=1.8677300306179896 (change=-0.16166186790544515 %)
[2026-01-09 22:26:43] 2026-01-09 21:26:24,174 | INFO     | right removable region: 105
[2026-01-09 22:26:43] 2026-01-09 21:26:24,174 | INFO     | sum of square deviations: 369281342.5
[2026-01-09 22:26:43] 2026-01-09 21:26:24,174 | INFO     | sum of deviations: -13336436771.0
[2026-01-09 22:26:43] 2026-01-09 21:26:24,174 | INFO     | mean x: 1767990748.5
[2026-01-09 22:26:43] 2026-01-09 21:26:24,174 | INFO     | mean y: 2397812.0566037735
[2026-01-09 22:26:43] 2026-01-09 21:26:24,174 | INFO     | intersect: 63852622872.05463
[2026-01-09 22:26:43] 2026-01-09 21:26:24,175 | INFO     | chi2: 0.06801386130956817
[2026-01-09 22:26:43] 2026-01-09 21:26:24,175 | INFO     | current chi2=0.06801386130956817 (change=96.35258775778985 %)
[2026-01-09 22:26:43] 2026-01-09 21:26:24,175 | INFO     | sum of square deviations: 319447850.0
[2026-01-09 22:26:43] 2026-01-09 21:26:24,175 | INFO     | sum of deviations: -11872085472.000004
[2026-01-09 22:26:43] 2026-01-09 21:26:24,175 | INFO     | mean x: 1767990901.0
[2026-01-09 22:26:43] 2026-01-09 21:26:24,175 | INFO     | mean y: 2393306.8118811883
[2026-01-09 22:26:43] 2026-01-09 21:26:24,175 | INFO     | intersect: 65708702146.862915
[2026-01-09 22:26:43] 2026-01-09 21:26:24,175 | INFO     | chi2: 0.06737025574264213
[2026-01-09 22:26:43] 2026-01-09 21:26:24,175 | INFO     | current chi2=0.06737025574264213 (change=0.9462858813391574 %)
[2026-01-09 22:26:43] 2026-01-09 21:26:24,175 | INFO     | left removable region: 20
[2026-01-09 22:26:43] 2026-01-09 21:26:24,175 | INFO     | sum of square deviations: 190403570.0
[2026-01-09 22:26:43] 2026-01-09 21:26:24,176 | INFO     | sum of deviations: -7470183586.000001
[2026-01-09 22:26:43] 2026-01-09 21:26:24,176 | INFO     | mean x: 1767991023.0
[2026-01-09 22:26:43] 2026-01-09 21:26:24,176 | INFO     | mean y: 2380812.0705882353
[2026-01-09 22:26:43] 2026-01-09 21:26:24,176 | INFO     | intersect: 69366718467.13635
[2026-01-09 22:26:43] 2026-01-09 21:26:24,176 | INFO     | chi2: 0.05967784625352767
[2026-01-09 22:26:43] 2026-01-09 21:26:24,176 | INFO     | current memory leak: -39.23 B/s (using 85 data points, chi2=0.06)
[2026-01-09 22:26:43] 2026-01-09 21:26:24,176 | INFO     | could have reported an average CPU frequency of 3700 MHz (7 samples)
[2026-01-09 22:26:43] 2026-01-09 21:26:24,176 | INFO     | ..............................
[2026-01-09 22:26:43] 2026-01-09 21:26:24,176 | INFO     | . Timing measurements:
[2026-01-09 22:26:43] 2026-01-09 21:26:24,176 | INFO     | . get job = 0 s
[2026-01-09 22:26:43] 2026-01-09 21:26:24,176 | INFO     | . initial setup = 1 s
[2026-01-09 22:26:43] 2026-01-09 21:26:24,176 | INFO     | . payload setup = 8 s
[2026-01-09 22:26:43] 2026-01-09 21:26:24,176 | INFO     | . stage-in = 0 s
[2026-01-09 22:26:43] 2026-01-09 21:26:24,176 | INFO     | . payload execution = 6737 s
[2026-01-09 22:26:43] 2026-01-09 21:26:24,177 | INFO     | . stage-out = 0 s
[2026-01-09 22:26:43] 2026-01-09 21:26:24,177 | INFO     | . log creation = 0 s
[2026-01-09 22:26:43] 2026-01-09 21:26:24,177 | INFO     | ..............................
[2026-01-09 22:26:43] 2026-01-09 21:26:24,217 | INFO     | 
[2026-01-09 22:26:43] 2026-01-09 21:26:24,217 | INFO     | job summary report
[2026-01-09 22:26:43] 2026-01-09 21:26:24,217 | INFO     | --------------------------------------------------
[2026-01-09 22:26:43] 2026-01-09 21:26:24,217 | INFO     | PanDA job id: 6963165516
[2026-01-09 22:26:43] 2026-01-09 21:26:24,217 | INFO     | task id: 47898826
[2026-01-09 22:26:43] 2026-01-09 21:26:24,217 | INFO     | errors: (none)
[2026-01-09 22:26:43] 2026-01-09 21:26:24,217 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 22:26:43] 2026-01-09 21:26:24,218 | INFO     | pilot state: finished 
[2026-01-09 22:26:43] 2026-01-09 21:26:24,218 | INFO     | transexitcode: 0
[2026-01-09 22:26:43] 2026-01-09 21:26:24,218 | INFO     | exeerrorcode: 0
[2026-01-09 22:26:43] 2026-01-09 21:26:24,218 | INFO     | exeerrordiag: 
[2026-01-09 22:26:43] 2026-01-09 21:26:24,218 | INFO     | exitcode: 0
[2026-01-09 22:26:43] 2026-01-09 21:26:24,218 | INFO     | exitmsg: OK
[2026-01-09 22:26:43] 2026-01-09 21:26:24,218 | INFO     | cpuconsumptiontime: 25832 s
[2026-01-09 22:26:43] 2026-01-09 21:26:24,218 | INFO     | nevents: 400
[2026-01-09 22:26:43] 2026-01-09 21:26:24,218 | INFO     | neventsw: 0
[2026-01-09 22:26:43] 2026-01-09 21:26:24,218 | INFO     | pid: 1863344
[2026-01-09 22:26:43] 2026-01-09 21:26:24,218 | INFO     | pgrp: 1863344
[2026-01-09 22:26:43] 2026-01-09 21:26:24,218 | INFO     | corecount: 4
[2026-01-09 22:26:43] 2026-01-09 21:26:24,218 | INFO     | event service: False
[2026-01-09 22:26:43] 2026-01-09 21:26:24,218 | INFO     | sizes: {0: 2283814, 1: 2284013, 7: 2284275, 11: 2284303, 6749: 2311398, 6750: 2320424, 6751: 2320608, 6759: 2320802}
[2026-01-09 22:26:43] 2026-01-09 21:26:24,218 | INFO     | --------------------------------------------------
[2026-01-09 22:26:43] 2026-01-09 21:26:24,218 | INFO     | 
[2026-01-09 22:26:43] 2026-01-09 21:26:24,219 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/4
[2026-01-09 22:26:43] 2026-01-09 21:26:24,244 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 22:26:43] 2026-01-09 21:26:24,245 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 22:26:43] 2026-01-09 21:26:24,245 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 22:26:43] 2026-01-09 21:26:24,245 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 22:26:43] 2026-01-09 21:26:24,245 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 22:26:43] 2026-01-09 21:26:24,245 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 22:26:43] 2026-01-09 21:26:24,245 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 22:26:43] 2026-01-09 21:26:24,245 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 22:26:43] 2026-01-09 21:26:24,245 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 22:26:43] 2026-01-09 21:26:24,246 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 22:26:43] 2026-01-09 21:26:24,246 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 22:26:43] 2026-01-09 21:26:24,246 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 22:26:43] 2026-01-09 21:26:24,246 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 22:26:43] 2026-01-09 21:26:24,246 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 22:26:43] 2026-01-09 21:26:24,246 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 22:26:43] 2026-01-09 21:26:24,246 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 22:26:43] 2026-01-09 21:26:24,246 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 22:26:43] 2026-01-09 21:26:24,246 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 22:26:43] 2026-01-09 21:26:24,246 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 22:26:43] 2026-01-09 21:26:24,246 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 22:26:43] 2026-01-09 21:26:24,246 | INFO     | job 6963165516 has completed (purged errors)
[2026-01-09 22:26:43] 2026-01-09 21:26:24,247 | INFO     | overall cleanup function is called
[2026-01-09 22:26:43] 2026-01-09 21:26:25,164 | INFO     | PID=1856696 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 22:26:43] 2026-01-09 21:26:25,165 | INFO     | .. there are 3 such processes running
[2026-01-09 22:26:43] 2026-01-09 21:26:25,254 | INFO     | --- collectZombieJob: --- 10, [1863344]
[2026-01-09 22:26:43] 2026-01-09 21:26:25,254 | INFO     | zombie collector waiting for pid 1863344
[2026-01-09 22:26:43] 2026-01-09 21:26:25,254 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 22:26:43] 2026-01-09 21:26:25,255 | INFO     | collected zombie processes
[2026-01-09 22:26:43] 2026-01-09 21:26:25,255 | INFO     | will attempt to kill all subprocesses of pid=1863344
[2026-01-09 22:26:43] 2026-01-09 21:26:25,482 | INFO     | process IDs to be killed: [1863344] (in reverse order)
[2026-01-09 22:26:43] 2026-01-09 21:26:25,569 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 22:26:43] 2026-01-09 21:26:25,570 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 22:26:43] 2026-01-09 21:26:25,574 | INFO     | did not find any defunct processes belonging to 1863344
[2026-01-09 22:26:43] 2026-01-09 21:26:25,579 | INFO     | did not find any defunct processes belonging to 1863344
[2026-01-09 22:26:43] 2026-01-09 21:26:25,579 | INFO     | ready for new job
[2026-01-09 22:26:43] 2026-01-09 21:26:25,579 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 22:26:43] 2026-01-09 21:26:25,581 | INFO     | ***************************************
[2026-01-09 22:26:43] 2026-01-09 21:26:25,581 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 22:26:43] 2026-01-09 21:26:25,582 | INFO     | ***************************************
[2026-01-09 22:26:43] 2026-01-09 21:26:25,582 | INFO     | 
[2026-01-09 22:26:43] 2026-01-09 21:26:25,582 | INFO     | pilot is running in a VM
[2026-01-09 22:26:43] 2026-01-09 21:26:25,582 | INFO     | architecture information:
[2026-01-09 22:26:43] 2026-01-09 21:26:25,583 | INFO     | executing command: cat /etc/os-release
[2026-01-09 22:26:43] 2026-01-09 21:26:25,601 | INFO     | cat /etc/os-release:
[2026-01-09 22:26:43] NAME="CentOS Linux"
[2026-01-09 22:26:43] VERSION="7 (Core)"
[2026-01-09 22:26:43] ID="centos"
[2026-01-09 22:26:43] ID_LIKE="rhel fedora"
[2026-01-09 22:26:43] VERSION_ID="7"
[2026-01-09 22:26:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 22:26:43] ANSI_COLOR="0;31"
[2026-01-09 22:26:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 22:26:43] HOME_URL="https://www.centos.org/"
[2026-01-09 22:26:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 22:26:43] 
[2026-01-09 22:26:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 22:26:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 22:26:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 22:26:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 22:26:43] 
[2026-01-09 22:26:43] 2026-01-09 21:26:25,602 | INFO     | ***************************************
[2026-01-09 22:26:43] 2026-01-09 21:26:26,106 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/4
[2026-01-09 22:26:43] 2026-01-09 21:26:26,124 | INFO     | sufficient remaining disk space (53536096256 B)
[2026-01-09 22:26:43] 2026-01-09 21:26:26,125 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 22:26:43] 2026-01-09 21:26:26,125 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 22:26:43] 2026-01-09 21:26:26,125 | INFO     | update_server=False
[2026-01-09 22:26:43] 2026-01-09 21:26:26,126 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 22:26:43] 2026-01-09 21:26:26,126 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 22:26:43] 2026-01-09 21:26:26,126 | INFO     | aborting loop
[2026-01-09 22:26:43] 2026-01-09 21:26:26,127 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 22:26:43] 2026-01-09 21:26:26,127 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-09 22:26:43] 2026-01-09 21:26:26,127 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 22:26:43] 2026-01-09 21:26:26,128 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 22:26:43] 2026-01-09 21:26:26,128 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 22:26:43] 2026-01-09 21:26:26,129 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 22:26:43] 2026-01-09 21:26:26,371 | INFO     | all data control threads have been joined
[2026-01-09 22:26:43] 2026-01-09 21:26:26,633 | INFO     | all payload control threads have been joined
[2026-01-09 22:26:43] 2026-01-09 21:26:27,131 | INFO     | [job] retrieve thread has finished
[2026-01-09 22:26:43] 2026-01-09 21:26:27,133 | INFO     | [job] job monitor thread has finished
[2026-01-09 22:26:43] 2026-01-09 21:26:27,133 | INFO     | [job] queue monitor thread has finished
[2026-01-09 22:26:43] 2026-01-09 21:26:27,137 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 22:26:43] 2026-01-09 21:26:27,168 | INFO     | [data] copytool_in thread has finished
[2026-01-09 22:26:43] 2026-01-09 21:26:27,174 | INFO     | [payload] validate_post thread has finished
[2026-01-09 22:26:43] 2026-01-09 21:26:27,376 | INFO     | [data] control thread has finished
[2026-01-09 22:26:43] 2026-01-09 21:26:27,546 | INFO     | all job control threads have been joined
[2026-01-09 22:26:43] 2026-01-09 21:26:27,639 | INFO     | [payload] control thread has finished
[2026-01-09 22:26:43] 2026-01-09 21:26:27,740 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 22:26:43] 2026-01-09 21:26:28,110 | INFO     | [job] validate thread has finished
[2026-01-09 22:26:43] 2026-01-09 21:26:28,110 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 22:26:43] 2026-01-09 21:26:28,113 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 22:26:43] 2026-01-09 21:26:28,134 | INFO     | [data] copytool_out thread has finished
[2026-01-09 22:26:43] 2026-01-09 21:26:28,249 | INFO     | [payload] failed_post thread has finished
[2026-01-09 22:26:43] 2026-01-09 21:26:28,551 | INFO     | [job] control thread has finished
[2026-01-09 22:26:43] 2026-01-09 21:26:31,144 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 22:26:43] 2026-01-09 21:26:36,113 | INFO     | [monitor] cgroup control has ended
[2026-01-09 22:26:43] 2026-01-09 21:26:36,817 | INFO     | job.realtimelogging is not enabled
[2026-01-09 22:26:43] 2026-01-09 21:26:37,823 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 22:26:43] 2026-01-09 21:26:38,020 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140321071028032)>', '<ExcThread(monitor, started 140320029255424)>']
[2026-01-09 22:26:43] 2026-01-09 21:26:38,193 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 22:26:43] 2026-01-09 21:26:38,193 | INFO     | [monitor] control thread has ended
[2026-01-09 22:26:43] 2026-01-09 21:26:43,045 | INFO     | all workflow threads have been joined
[2026-01-09 22:26:43] 2026-01-09 21:26:43,045 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 22:26:43] 2026-01-09 21:26:43,046 | INFO     | traces error code: 0
[2026-01-09 22:26:43] 2026-01-09 21:26:43,047 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 22:26:43] 2026-01-09 21:26:43,170 [wrapper] ==== pilot stdout END ====
[2026-01-09 22:26:43] 2026-01-09 21:26:43,176 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 22:26:43] 2026-01-09 21:26:43,182 [wrapper] pilotpid: 1856696
[2026-01-09 22:26:43] 2026-01-09 21:26:43,188 [wrapper] Pilot exit status: 0
[2026-01-09 22:26:43] 2026-01-09 21:26:43,210 [wrapper] pandaids: 6963165516
[2026-01-09 22:26:43] 2026-01-09 21:26:43,287 [wrapper] cleanup supervisor_pilot 1917481 1856697
[2026-01-09 22:26:43] 2026-01-09 21:26:43,294 [wrapper] Test setup, not cleaning
[2026-01-09 22:26:43] 2026-01-09 21:26:43,301 [wrapper] apfmon messages muted
[2026-01-09 22:26:43] 2026-01-09 21:26:43,307 [wrapper] ==== wrapper stdout END ====
[2026-01-09 22:26:43] 2026-01-09 21:26:43,314 [wrapper] ==== wrapper stderr END ====
[2026-01-09 22:26:43]  *** Error codes and diagnostics ***
[2026-01-09 22:26:43]     "exeErrorCode": 0,
[2026-01-09 22:26:43]     "exeErrorDiag": "",
[2026-01-09 22:26:43]     "pilotErrorCode": 0,
[2026-01-09 22:26:43]     "pilotErrorDiag": "",
[2026-01-09 22:26:43]  *** Listing of results directory ***
[2026-01-09 22:26:43] insgesamt 436852
[2026-01-09 22:26:43] -rwx------ 1 yeti boinc     36322 Jan  9 01:56 runpilot2-wrapper.sh
[2026-01-09 22:26:43] -rw-r--r-- 1 yeti boinc      5112 Jan  9 01:56 queuedata.json
[2026-01-09 22:26:43] -rw-r--r-- 1 yeti boinc    579449 Jan  9 01:57 pilot3.tar.gz
[2026-01-09 22:26:43] -rw-r--r-- 1 yeti boinc       100 Jan  9 20:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 22:26:43] -rwxr-xr-x 1 yeti boinc      7986 Jan  9 20:33 run_atlas
[2026-01-09 22:26:43] -rw-r--r-- 1 yeti boinc       105 Jan  9 20:33 job.xml
[2026-01-09 22:26:43] -rw-r--r-- 2 yeti boinc 226415973 Jan  9 20:33 EVNT.47898824._001345.pool.root.1
[2026-01-09 22:26:43] -rw-r--r-- 2 yeti boinc     15847 Jan  9 20:33 start_atlas.sh
[2026-01-09 22:26:43] drwxrwx--x 2 yeti boinc      4096 Jan  9 20:33 shared
[2026-01-09 22:26:43] -rw-r--r-- 2 yeti boinc    592396 Jan  9 20:33 input.tar.gz
[2026-01-09 22:26:43] -rw-r--r-- 1 yeti boinc         0 Jan  9 20:33 boinc_setup_complete
[2026-01-09 22:26:43] -rw-r--r-- 1 yeti boinc      6557 Jan  9 20:33 init_data.xml
[2026-01-09 22:26:43] -rw-r--r-- 1 yeti boinc         0 Jan  9 20:33 boinc_lockfile
[2026-01-09 22:26:43] -rw-r--r-- 1 yeti boinc      2520 Jan  9 20:33 pandaJob.out
[2026-01-09 22:26:43] -rw------- 1 yeti boinc        52 Jan  9 20:33 setup.sh.local
[2026-01-09 22:26:43] -rw------- 1 yeti boinc    989364 Jan  9 20:33 agis_schedconf.cvmfs.json
[2026-01-09 22:26:43] -rw------- 1 yeti boinc   1516240 Jan  9 20:33 agis_ddmendpoints.agis.ALL.json
[2026-01-09 22:26:43] drwx------ 5 yeti boinc      4096 Jan  9 20:33 pilot3
[2026-01-09 22:26:43] -rw------- 1 yeti boinc 214432781 Jan  9 22:25 HITS.47898826._034735.pool.root.1
[2026-01-09 22:26:43] -rw------- 1 yeti boinc      1019 Jan  9 22:26 memory_monitor_summary.json
[2026-01-09 22:26:43] -rw-r--r-- 1 yeti boinc      8192 Jan  9 22:26 boinc_mmap_file
[2026-01-09 22:26:43] -rw------- 1 yeti boinc    296139 Jan  9 22:26 log.47898826._034735.job.log.tgz.1
[2026-01-09 22:26:43] -rw-r--r-- 1 yeti boinc        27 Jan  9 22:26 wrapper_checkpoint.txt
[2026-01-09 22:26:43] -rw-r--r-- 1 yeti boinc       530 Jan  9 22:26 boinc_task_state.xml
[2026-01-09 22:26:43] -rw------- 1 yeti boinc        95 Jan  9 22:26 pilot_heartbeat.json
[2026-01-09 22:26:43] -rw------- 1 yeti boinc      7732 Jan  9 22:26 heartbeat.json
[2026-01-09 22:26:43] -rw------- 1 yeti boinc      4700 Jan  9 22:26 pilotlog.txt
[2026-01-09 22:26:43] -rw------- 1 yeti boinc    990131 Jan  9 22:26 log.47898826._034735.job.log.1
[2026-01-09 22:26:43] -rw------- 1 yeti boinc       357 Jan  9 22:26 output.list
[2026-01-09 22:26:43] -rw-r--r-- 1 yeti boinc       620 Jan  9 22:26 runtime_log
[2026-01-09 22:26:43] -rw------- 1 yeti boinc   1300480 Jan  9 22:26 result.tar.gz
[2026-01-09 22:26:43] -rw-r--r-- 1 yeti boinc      9547 Jan  9 22:26 runtime_log.err
[2026-01-09 22:26:43] -rw------- 1 yeti boinc       638 Jan  9 22:26 O3RNDm2yFy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmSVgKDmiEFRam.diag
[2026-01-09 22:26:43] -rw-r--r-- 1 yeti boinc     21023 Jan  9 22:26 stderr.txt
[2026-01-09 22:26:43] HITS file was successfully produced:
[2026-01-09 22:26:43] -rw------- 1 yeti boinc 214432781 Jan  9 22:25 shared/HITS.pool.root.1
[2026-01-09 22:26:43]  *** Contents of shared directory: ***
[2026-01-09 22:26:43] insgesamt 432396
[2026-01-09 22:26:43] -rw-r--r-- 2 yeti boinc 226415973 Jan  9 20:33 ATLAS.root_0
[2026-01-09 22:26:43] -rw-r--r-- 2 yeti boinc     15847 Jan  9 20:33 start_atlas.sh
[2026-01-09 22:26:43] -rw-r--r-- 2 yeti boinc    592396 Jan  9 20:33 input.tar.gz
[2026-01-09 22:26:43] -rw------- 1 yeti boinc 214432781 Jan  9 22:25 HITS.pool.root.1
[2026-01-09 22:26:43] -rw------- 1 yeti boinc   1300480 Jan  9 22:26 result.tar.gz
22:26:45 (1852844): run_atlas exited; CPU time 26089.193913
22:26:45 (1852844): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN