Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:49:21 (674567): wrapper (7.7.26015): starting
09:49:21 (674567): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 09:49:21] Arguments: --nthreads 8
[2026-01-09 09:49:21] Threads: 8
[2026-01-09 09:49:21] Checking for CVMFS
[2026-01-09 09:49:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 09:49:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 09:49:22] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 09:49:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 09:49:23] 2.13.3.0 12846 93504 157608 154946 3 535 24654650 32935937 18382 16776704 0 423610254 99.469 608349871 38378 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 09:49:23] CVMFS is ok
[2026-01-09 09:49:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 09:49:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 09:49:23] Further information can be found at the LHC@home message board.
[2026-01-09 09:49:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 09:49:23] Checking for apptainer binary...
[2026-01-09 09:49:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 09:49:23] Running /usr/bin/apptainer --version
[2026-01-09 09:49:23] apptainer version 1.4.5-2.el9
[2026-01-09 09:49:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 09:49:24] c7-16-9.aglt2.org
[2026-01-09 09:49:24] apptainer works
[2026-01-09 09:49:24] Set ATHENA_PROC_NUMBER=8
[2026-01-09 09:49:24] Set ATHENA_CORE_NUMBER=8
[2026-01-09 09:49:24] Starting ATLAS job with PandaID=6963165994
[2026-01-09 09:49:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 15:45:27]  *** The last 200 lines of the pilot log: ***
[2026-01-09 15:45:27] 2026-01-09 20:44:38,171 | INFO     | mean y: 2505078.6379310344
[2026-01-09 15:45:27] 2026-01-09 20:44:38,172 | INFO     | intersect: -9150821111.862286
[2026-01-09 15:45:27] 2026-01-09 20:44:38,172 | INFO     | chi2: 1.448336749432086
[2026-01-09 15:45:27] 2026-01-09 20:44:38,172 | INFO     | sum of square deviations: 12513128829.539331
[2026-01-09 15:45:27] 2026-01-09 20:44:38,202 | INFO     | sum of deviations: 66493888741.47807
[2026-01-09 15:45:27] 2026-01-09 20:44:38,202 | INFO     | mean x: 1767980649.5247812
[2026-01-09 15:45:27] 2026-01-09 20:44:38,202 | INFO     | mean y: 2504758.7084548105
[2026-01-09 15:45:27] 2026-01-09 20:44:38,202 | INFO     | intersect: -9392420380.163858
[2026-01-09 15:45:27] 2026-01-09 20:44:38,203 | INFO     | chi2: 1.4485088400640047
[2026-01-09 15:45:27] 2026-01-09 20:44:38,203 | INFO     | current chi2=1.4485088400640047 (change=-0.011881948862112138 %)
[2026-01-09 15:45:27] 2026-01-09 20:44:38,203 | INFO     | right removable region: 342
[2026-01-09 15:45:27] 2026-01-09 20:44:38,203 | INFO     | sum of square deviations: 12513101381.294445
[2026-01-09 15:45:27] 2026-01-09 20:44:38,205 | INFO     | sum of deviations: 12795998766.218662
[2026-01-09 15:45:27] 2026-01-09 20:44:38,205 | INFO     | mean x: 1767980954.5364432
[2026-01-09 15:45:27] 2026-01-09 20:44:38,205 | INFO     | mean y: 2520054.9825072885
[2026-01-09 15:45:27] 2026-01-09 20:44:38,205 | INFO     | intersect: -1805431580.953661
[2026-01-09 15:45:27] 2026-01-09 20:44:38,223 | INFO     | chi2: 0.033757855846768214
[2026-01-09 15:45:27] 2026-01-09 20:44:38,223 | INFO     | current chi2=0.033757855846768214 (change=97.66919841949705 %)
[2026-01-09 15:45:27] 2026-01-09 20:44:38,223 | INFO     | sum of square deviations: 11973770032.334297
[2026-01-09 15:45:27] 2026-01-09 20:44:38,225 | INFO     | sum of deviations: 5097368291.810651
[2026-01-09 15:45:27] 2026-01-09 20:44:38,226 | INFO     | mean x: 1767981107.0443788
[2026-01-09 15:45:27] 2026-01-09 20:44:38,226 | INFO     | mean y: 2522218.479289941
[2026-01-09 15:45:27] 2026-01-09 20:44:38,226 | INFO     | intersect: -750127181.9377817
[2026-01-09 15:45:27] 2026-01-09 20:44:38,226 | INFO     | chi2: 0.005897777248065552
[2026-01-09 15:45:27] 2026-01-09 20:44:38,226 | INFO     | current chi2=0.005897777248065552 (change=82.5291710621776 %)
[2026-01-09 15:45:27] 2026-01-09 20:44:38,226 | INFO     | sum of square deviations: 11450159908.330347
[2026-01-09 15:45:27] 2026-01-09 20:44:38,274 | INFO     | sum of deviations: 8628761324.861858
[2026-01-09 15:45:27] 2026-01-09 20:44:38,274 | INFO     | mean x: 1767981259.5525525
[2026-01-09 15:45:27] 2026-01-09 20:44:38,274 | INFO     | mean y: 2521188.750750751
[2026-01-09 15:45:27] 2026-01-09 20:44:38,275 | INFO     | intersect: -1329817262.2091155
[2026-01-09 15:45:27] 2026-01-09 20:44:38,275 | INFO     | chi2: 0.001385846212539598
[2026-01-09 15:45:27] 2026-01-09 20:44:38,275 | INFO     | current chi2=0.001385846212539598 (change=76.50222864903637 %)
[2026-01-09 15:45:27] 2026-01-09 20:44:38,275 | INFO     | sum of square deviations: 10942058881.899445
[2026-01-09 15:45:27] 2026-01-09 20:44:38,277 | INFO     | sum of deviations: 7318941901.753053
[2026-01-09 15:45:27] 2026-01-09 20:44:38,282 | INFO     | mean x: 1767981412.057927
[2026-01-09 15:45:27] 2026-01-09 20:44:38,282 | INFO     | mean y: 2521579.9603658537
[2026-01-09 15:45:27] 2026-01-09 20:44:38,282 | INFO     | intersect: -1180048663.710729
[2026-01-09 15:45:27] 2026-01-09 20:44:38,282 | INFO     | chi2: 0.0009021284057543836
[2026-01-09 15:45:27] 2026-01-09 20:44:38,282 | INFO     | current chi2=0.0009021284057543836 (change=34.90414754598126 %)
[2026-01-09 15:45:27] 2026-01-09 20:44:38,282 | INFO     | sum of square deviations: 10449193825.318903
[2026-01-09 15:45:27] 2026-01-09 20:44:38,284 | INFO     | sum of deviations: 7189774742.464402
[2026-01-09 15:45:27] 2026-01-09 20:44:38,285 | INFO     | mean x: 1767981564.5665634
[2026-01-09 15:45:27] 2026-01-09 20:44:38,285 | INFO     | mean y: 2521619.931888545
[2026-01-09 15:45:27] 2026-01-09 20:44:38,285 | INFO     | intersect: -1213973107.8492215
[2026-01-09 15:45:27] 2026-01-09 20:44:38,285 | INFO     | chi2: 0.0008886368100091695
[2026-01-09 15:45:27] 2026-01-09 20:44:38,285 | INFO     | current chi2=0.0008886368100091695 (change=1.4955294234341412 %)
[2026-01-09 15:45:27] 2026-01-09 20:44:38,285 | INFO     | left removable region: 50
[2026-01-09 15:45:27] 2026-01-09 20:44:38,285 | INFO     | sum of square deviations: 7720088586.01026
[2026-01-09 15:45:27] 2026-01-09 20:44:38,311 | INFO     | sum of deviations: 4971687239.513694
[2026-01-09 15:45:27] 2026-01-09 20:44:38,311 | INFO     | mean x: 1767982144.0582192
[2026-01-09 15:45:27] 2026-01-09 20:44:38,311 | INFO     | mean y: 2522196.9109589043
[2026-01-09 15:45:27] 2026-01-09 20:44:38,311 | INFO     | intersect: -1136046896.8725755
[2026-01-09 15:45:27] 2026-01-09 20:44:38,311 | INFO     | chi2: 0.0007766978611326228
[2026-01-09 15:45:27] 2026-01-09 20:44:38,312 | INFO     | current memory leak: 0.64 B/s (using 292 data points, chi2=0.00)
[2026-01-09 15:45:27] 2026-01-09 20:44:38,312 | INFO     | could have reported an average CPU frequency of 3177 MHz (15 samples)
[2026-01-09 15:45:27] 2026-01-09 20:44:38,312 | INFO     | ..............................
[2026-01-09 15:45:27] 2026-01-09 20:44:38,312 | INFO     | . Timing measurements:
[2026-01-09 15:45:27] 2026-01-09 20:44:38,336 | INFO     | . get job = 0 s
[2026-01-09 15:45:27] 2026-01-09 20:44:38,336 | INFO     | . initial setup = 2 s
[2026-01-09 15:45:27] 2026-01-09 20:44:38,336 | INFO     | . payload setup = 9 s
[2026-01-09 15:45:27] 2026-01-09 20:44:38,336 | INFO     | . stage-in = 0 s
[2026-01-09 15:45:27] 2026-01-09 20:44:38,336 | INFO     | . payload execution = 21224 s
[2026-01-09 15:45:27] 2026-01-09 20:44:38,336 | INFO     | . stage-out = 3 s
[2026-01-09 15:45:27] 2026-01-09 20:44:38,336 | INFO     | . log creation = 0 s
[2026-01-09 15:45:27] 2026-01-09 20:44:38,336 | INFO     | ..............................
[2026-01-09 15:45:27] 2026-01-09 20:44:38,787 | INFO     | 
[2026-01-09 15:45:27] 2026-01-09 20:44:38,787 | INFO     | job summary report
[2026-01-09 15:45:27] 2026-01-09 20:44:38,787 | INFO     | --------------------------------------------------
[2026-01-09 15:45:27] 2026-01-09 20:44:38,787 | INFO     | PanDA job id: 6963165994
[2026-01-09 15:45:27] 2026-01-09 20:44:38,787 | INFO     | task id: 47898826
[2026-01-09 15:45:27] 2026-01-09 20:44:38,787 | INFO     | errors: (none)
[2026-01-09 15:45:27] 2026-01-09 20:44:38,787 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 15:45:27] 2026-01-09 20:44:38,787 | INFO     | pilot state: finished 
[2026-01-09 15:45:27] 2026-01-09 20:44:38,787 | INFO     | transexitcode: 0
[2026-01-09 15:45:27] 2026-01-09 20:44:38,787 | INFO     | exeerrorcode: 0
[2026-01-09 15:45:27] 2026-01-09 20:44:38,788 | INFO     | exeerrordiag: 
[2026-01-09 15:45:27] 2026-01-09 20:44:38,788 | INFO     | exitcode: 0
[2026-01-09 15:45:27] 2026-01-09 20:44:38,788 | INFO     | exitmsg: OK
[2026-01-09 15:45:27] 2026-01-09 20:44:38,788 | INFO     | cpuconsumptiontime: 49377 s
[2026-01-09 15:45:27] 2026-01-09 20:44:38,788 | INFO     | nevents: 400
[2026-01-09 15:45:27] 2026-01-09 20:44:38,788 | INFO     | neventsw: 0
[2026-01-09 15:45:27] 2026-01-09 20:44:38,788 | INFO     | pid: 688281
[2026-01-09 15:45:27] 2026-01-09 20:44:38,788 | INFO     | pgrp: 688281
[2026-01-09 15:45:27] 2026-01-09 20:44:38,788 | INFO     | corecount: 8
[2026-01-09 15:45:27] 2026-01-09 20:44:38,788 | INFO     | event service: False
[2026-01-09 15:45:27] 2026-01-09 20:44:38,788 | INFO     | sizes: {0: 2283971, 9: 2284233, 11: 2284261, 21238: 2317986, 21243: 2327040, 21278: 2327178}
[2026-01-09 15:45:27] 2026-01-09 20:44:38,788 | INFO     | --------------------------------------------------
[2026-01-09 15:45:27] 2026-01-09 20:44:38,788 | INFO     | 
[2026-01-09 15:45:27] 2026-01-09 20:44:38,788 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 15:45:27] 2026-01-09 20:44:39,008 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 15:45:27] 2026-01-09 20:44:39,008 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 15:45:27] 2026-01-09 20:44:39,008 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 15:45:27] 2026-01-09 20:44:39,009 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 15:45:27] 2026-01-09 20:44:39,009 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 15:45:27] 2026-01-09 20:44:39,009 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 15:45:27] 2026-01-09 20:44:39,009 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 15:45:27] 2026-01-09 20:44:39,009 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 15:45:27] 2026-01-09 20:44:39,009 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 15:45:27] 2026-01-09 20:44:39,009 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 15:45:27] 2026-01-09 20:44:39,009 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 15:45:27] 2026-01-09 20:44:39,009 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 15:45:27] 2026-01-09 20:44:39,009 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 15:45:27] 2026-01-09 20:44:39,009 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 15:45:27] 2026-01-09 20:44:39,009 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 15:45:27] 2026-01-09 20:44:39,009 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 15:45:27] 2026-01-09 20:44:39,009 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 15:45:27] 2026-01-09 20:44:39,009 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 15:45:27] 2026-01-09 20:44:39,010 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 15:45:27] 2026-01-09 20:44:39,010 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 15:45:27] 2026-01-09 20:44:39,010 | INFO     | job 6963165994 has completed (purged errors)
[2026-01-09 15:45:27] 2026-01-09 20:44:39,010 | INFO     | overall cleanup function is called
[2026-01-09 15:45:27] 2026-01-09 20:44:40,050 | INFO     | --- collectZombieJob: --- 10, [688281]
[2026-01-09 15:45:27] 2026-01-09 20:44:40,069 | INFO     | zombie collector waiting for pid 688281
[2026-01-09 15:45:27] 2026-01-09 20:44:40,069 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 15:45:27] 2026-01-09 20:44:40,069 | INFO     | collected zombie processes
[2026-01-09 15:45:27] 2026-01-09 20:44:40,069 | INFO     | will attempt to kill all subprocesses of pid=688281
[2026-01-09 15:45:27] 2026-01-09 20:44:42,224 | INFO     | process IDs to be killed: [688281] (in reverse order)
[2026-01-09 15:45:27] 2026-01-09 20:44:43,143 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 15:45:27] 2026-01-09 20:44:43,144 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 15:45:27] 2026-01-09 20:44:43,240 | INFO     | did not find any defunct processes belonging to 688281
[2026-01-09 15:45:27] 2026-01-09 20:44:43,392 | INFO     | did not find any defunct processes belonging to 688281
[2026-01-09 15:45:27] 2026-01-09 20:44:43,392 | INFO     | ready for new job
[2026-01-09 15:45:27] 2026-01-09 20:44:43,392 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 15:45:27] 2026-01-09 20:44:43,395 | INFO     | ***************************************
[2026-01-09 15:45:27] 2026-01-09 20:44:43,395 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 15:45:27] 2026-01-09 20:44:43,395 | INFO     | ***************************************
[2026-01-09 15:45:27] 2026-01-09 20:44:43,395 | INFO     | 
[2026-01-09 15:45:27] 2026-01-09 20:44:43,441 | INFO     | architecture information:
[2026-01-09 15:45:27] 2026-01-09 20:44:43,449 | INFO     | executing command: cat /etc/os-release
[2026-01-09 15:45:27] 2026-01-09 20:44:43,640 | INFO     | cat /etc/os-release:
[2026-01-09 15:45:27] NAME="CentOS Linux"
[2026-01-09 15:45:27] VERSION="7 (Core)"
[2026-01-09 15:45:27] ID="centos"
[2026-01-09 15:45:27] ID_LIKE="rhel fedora"
[2026-01-09 15:45:27] VERSION_ID="7"
[2026-01-09 15:45:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 15:45:27] ANSI_COLOR="0;31"
[2026-01-09 15:45:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 15:45:27] HOME_URL="https://www.centos.org/"
[2026-01-09 15:45:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 15:45:27] 
[2026-01-09 15:45:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 15:45:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 15:45:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 15:45:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 15:45:27] 
[2026-01-09 15:45:27] 2026-01-09 20:44:43,640 | INFO     | ***************************************
[2026-01-09 15:45:27] 2026-01-09 20:44:44,144 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 15:45:27] 2026-01-09 20:44:44,279 | INFO     | sufficient remaining disk space (74651271168 B)
[2026-01-09 15:45:27] 2026-01-09 20:44:44,280 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 15:45:27] 2026-01-09 20:44:44,280 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 15:45:27] 2026-01-09 20:44:44,280 | INFO     | update_server=False
[2026-01-09 15:45:27] 2026-01-09 20:44:44,280 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 15:45:27] 2026-01-09 20:44:44,281 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 15:45:27] 2026-01-09 20:44:44,485 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 15:45:27] 2026-01-09 20:44:44,527 | INFO     | all job control threads have been joined
[2026-01-09 15:45:27] 2026-01-09 20:44:44,834 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 15:45:27] 2026-01-09 20:44:44,834 | INFO     | aborting loop
[2026-01-09 15:45:27] 2026-01-09 20:44:44,905 | INFO     | all payload control threads have been joined
[2026-01-09 15:45:27] 2026-01-09 20:44:44,927 | INFO     | all data control threads have been joined
[2026-01-09 15:45:27] 2026-01-09 20:44:45,285 | INFO     | [job] retrieve thread has finished
[2026-01-09 15:45:27] 2026-01-09 20:44:45,287 | INFO     | [job] queue monitor thread has finished
[2026-01-09 15:45:27] 2026-01-09 20:44:45,449 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 15:45:27] 2026-01-09 20:44:45,449 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 15:45:27] 2026-01-09 20:44:45,533 | INFO     | [job] control thread has finished
[2026-01-09 15:45:27] 2026-01-09 20:44:45,643 | INFO     | [data] copytool_in thread has finished
[2026-01-09 15:45:27] 2026-01-09 20:44:45,825 | INFO     | [payload] failed_post thread has finished
[2026-01-09 15:45:27] 2026-01-09 20:44:45,840 | INFO     | [job] job monitor thread has finished
[2026-01-09 15:45:27] 2026-01-09 20:44:45,911 | INFO     | [payload] control thread has finished
[2026-01-09 15:45:27] 2026-01-09 20:44:45,933 | INFO     | [data] control thread has finished
[2026-01-09 15:45:27] 2026-01-09 20:44:46,037 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 15:45:27] 2026-01-09 20:44:46,417 | INFO     | [job] validate thread has finished
[2026-01-09 15:45:27] 2026-01-09 20:44:46,492 | INFO     | [data] copytool_out thread has finished
[2026-01-09 15:45:27] 2026-01-09 20:44:46,538 | INFO     | [payload] validate_post thread has finished
[2026-01-09 15:45:27] 2026-01-09 20:44:46,685 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 15:45:27] 2026-01-09 20:44:46,703 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 15:45:27] 2026-01-09 20:44:50,048 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 15:45:27] 2026-01-09 20:45:13,771 | INFO     | PID=679219 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 15:45:27] 2026-01-09 20:45:13,771 | INFO     | .. there are 16 such processes running
[2026-01-09 15:45:27] 2026-01-09 20:45:13,771 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 15:45:27] 2026-01-09 20:45:13,772 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 15:45:27] 2026-01-09 20:45:13,772 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 15:45:27] 2026-01-09 20:45:18,582 | INFO     | [monitor] cgroup control has ended
[2026-01-09 15:45:27] 2026-01-09 20:45:20,004 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140021384226624)>', '<ExcThread(monitor, started 140020748900096)>']
[2026-01-09 15:45:27] 2026-01-09 20:45:20,816 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 15:45:27] 2026-01-09 20:45:20,818 | INFO     | [monitor] control thread has ended
[2026-01-09 15:45:27] 2026-01-09 20:45:25,048 | INFO     | all workflow threads have been joined
[2026-01-09 15:45:27] 2026-01-09 20:45:25,048 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 15:45:27] 2026-01-09 20:45:25,048 | INFO     | traces error code: 0
[2026-01-09 15:45:27] 2026-01-09 20:45:25,048 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 15:45:27] 2026-01-09 20:45:25,837 [wrapper] ==== pilot stdout END ====
[2026-01-09 15:45:27] 2026-01-09 20:45:25,884 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 15:45:27] 2026-01-09 20:45:25,928 [wrapper] pilotpid: 679219
[2026-01-09 15:45:27] 2026-01-09 20:45:25,966 [wrapper] Pilot exit status: 0
[2026-01-09 15:45:27] 2026-01-09 20:45:26,089 [wrapper] pandaids: 6963165994
[2026-01-09 15:45:27] 2026-01-09 20:45:26,853 [wrapper] cleanup supervisor_pilot 1547096 679220
[2026-01-09 15:45:27] 2026-01-09 20:45:26,856 [wrapper] Test setup, not cleaning
[2026-01-09 15:45:27] 2026-01-09 20:45:26,859 [wrapper] apfmon messages muted
[2026-01-09 15:45:27] 2026-01-09 20:45:26,862 [wrapper] ==== wrapper stdout END ====
[2026-01-09 15:45:27] 2026-01-09 20:45:26,865 [wrapper] ==== wrapper stderr END ====
[2026-01-09 15:45:27]  *** Error codes and diagnostics ***
[2026-01-09 15:45:27]     "exeErrorCode": 0,
[2026-01-09 15:45:27]     "exeErrorDiag": "",
[2026-01-09 15:45:27]     "pilotErrorCode": 0,
[2026-01-09 15:45:27]     "pilotErrorDiag": "",
[2026-01-09 15:45:27]  *** Listing of results directory ***
[2026-01-09 15:45:27] total 446400
[2026-01-09 15:45:27] -rwx------. 1 boincer umatlas     36322 Jan  8 19:57 runpilot2-wrapper.sh
[2026-01-09 15:45:27] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 19:57 pilot3.tar.gz
[2026-01-09 15:45:27] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 19:57 queuedata.json
[2026-01-09 15:45:27] -rw-r--r--. 1 boincer umatlas       100 Jan  9 09:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 15:45:27] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 09:49 run_atlas
[2026-01-09 15:45:27] -rw-r--r--. 1 boincer umatlas       105 Jan  9 09:49 job.xml
[2026-01-09 15:45:27] -rw-r--r--. 2 boincer umatlas 225341910 Jan  9 09:49 EVNT.47898824._001360.pool.root.1
[2026-01-09 15:45:27] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 09:49 start_atlas.sh
[2026-01-09 15:45:27] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 09:49 shared
[2026-01-09 15:45:27] -rw-r--r--. 2 boincer umatlas    592395 Jan  9 09:49 input.tar.gz
[2026-01-09 15:45:27] -rw-r--r--. 1 boincer umatlas         0 Jan  9 09:49 boinc_lockfile
[2026-01-09 15:45:27] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 09:49 pandaJob.out
[2026-01-09 15:45:27] -rw-------. 1 boincer umatlas        57 Jan  9 09:49 setup.sh.local
[2026-01-09 15:45:27] -rw-------. 1 boincer umatlas    989377 Jan  9 09:49 agis_schedconf.cvmfs.json
[2026-01-09 15:45:27] drwx------. 5 boincer umatlas      4096 Jan  9 09:49 pilot3
[2026-01-09 15:45:27] -rw-r--r--. 1 boincer umatlas      6946 Jan  9 15:38 init_data.xml
[2026-01-09 15:45:27] -rw-------. 1 boincer umatlas 221295208 Jan  9 15:43 HITS.47898826._035107.pool.root.1
[2026-01-09 15:45:27] -rw-r--r--. 1 boincer umatlas       531 Jan  9 15:43 boinc_task_state.xml
[2026-01-09 15:45:27] -rw-------. 1 boincer umatlas      1030 Jan  9 15:43 memory_monitor_summary.json
[2026-01-09 15:45:27] -rw-------. 1 boincer umatlas   1516240 Jan  9 15:44 agis_ddmendpoints.agis.ALL.json
[2026-01-09 15:45:27] -rw-------. 1 boincer umatlas    544447 Jan  9 15:44 log.47898826._035107.job.log.tgz.1
[2026-01-09 15:45:27] -rw-------. 1 boincer umatlas      7771 Jan  9 15:44 heartbeat.json
[2026-01-09 15:45:27] -rw-------. 1 boincer umatlas        95 Jan  9 15:44 pilot_heartbeat.json
[2026-01-09 15:45:27] -rw-------. 1 boincer umatlas      4823 Jan  9 15:45 pilotlog.txt
[2026-01-09 15:45:27] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 15:45 boinc_mmap_file
[2026-01-09 15:45:27] -rw-r--r--. 1 boincer umatlas        28 Jan  9 15:45 wrapper_checkpoint.txt
[2026-01-09 15:45:27] -rw-------. 1 boincer umatlas   2733888 Jan  9 15:45 log.47898826._035107.job.log.1
[2026-01-09 15:45:27] -rw-------. 1 boincer umatlas       357 Jan  9 15:45 output.list
[2026-01-09 15:45:27] -rw-r--r--. 1 boincer umatlas       620 Jan  9 15:45 runtime_log
[2026-01-09 15:45:27] -rw-------. 1 boincer umatlas   3297280 Jan  9 15:45 result.tar.gz
[2026-01-09 15:45:27] -rw-------. 1 boincer umatlas       654 Jan  9 15:45 UWkNDmPzFy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmFmlKDmY6Pzon.diag
[2026-01-09 15:45:27] -rw-r--r--. 1 boincer umatlas      9338 Jan  9 15:45 runtime_log.err
[2026-01-09 15:45:27] -rw-r--r--. 1 boincer umatlas     20990 Jan  9 15:45 stderr.txt
[2026-01-09 15:45:27] HITS file was successfully produced:
[2026-01-09 15:45:27] -rw-------. 1 boincer umatlas 221295208 Jan  9 15:43 shared/HITS.pool.root.1
[2026-01-09 15:45:27]  *** Contents of shared directory: ***
[2026-01-09 15:45:27] total 440000
[2026-01-09 15:45:27] -rw-r--r--. 2 boincer umatlas 225341910 Jan  9 09:49 ATLAS.root_0
[2026-01-09 15:45:27] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 09:49 start_atlas.sh
[2026-01-09 15:45:27] -rw-r--r--. 2 boincer umatlas    592395 Jan  9 09:49 input.tar.gz
[2026-01-09 15:45:27] -rw-------. 1 boincer umatlas 221295208 Jan  9 15:43 HITS.pool.root.1
[2026-01-09 15:45:27] -rw-------. 1 boincer umatlas   3297280 Jan  9 15:45 result.tar.gz
15:45:29 (674567): run_atlas exited; CPU time 50096.404398
15:45:29 (674567): called boinc_finish(0)

</stderr_txt>
]]>

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