Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:39:09 (28232): wrapper (7.7.26015): starting
17:39:09 (28232): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 17:39:09] Arguments: --nthreads 8
[2026-01-09 17:39:09] Threads: 8
[2026-01-09 17:39:09] Checking for CVMFS
[2026-01-09 17:39:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 17:39:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 17:39:09] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 17:39:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 17:39:09] 2.11.2.0 22272 35665 95172 154950 0 57 12764206 25165824 0 130560 0 15966450 99.852 10924654 2885 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 17:39:09] CVMFS is ok
[2026-01-09 17:39:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 17:39:09] Checking for apptainer binary...
[2026-01-09 17:39:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 17:39:09] Running /usr/bin/apptainer --version
[2026-01-09 17:39:09] apptainer version 1.3.2-1.el7
[2026-01-09 17:39:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 17:39:11] cg-vwn457.simple-grid.lan
[2026-01-09 17:39:11] apptainer works
[2026-01-09 17:39:11] Set ATHENA_PROC_NUMBER=8
[2026-01-09 17:39:11] Set ATHENA_CORE_NUMBER=8
[2026-01-09 17:39:11] Starting ATLAS job with PandaID=6963162786
[2026-01-09 17:39:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 20:09:45]  *** The last 200 lines of the pilot log: ***
[2026-01-09 20:09:45] 2026-01-09 19:08:38,536 | INFO     | using path: /var/lib/boinc/slots/16/PanDA_Pilot-6963162786/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 20:09:45] 2026-01-09 19:08:38,537 | INFO     | extracted standard info from prmon json
[2026-01-09 20:09:45] 2026-01-09 19:08:38,537 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 20:09:45] 2026-01-09 19:08:38,537 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 20:09:45] 2026-01-09 19:08:38,538 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 20:09:45] 2026-01-09 19:08:38,538 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 20:09:45] 2026-01-09 19:08:38,541 | INFO     | fitting pss+swap vs Time
[2026-01-09 20:09:45] 2026-01-09 19:08:38,541 | INFO     | sum of square deviations: 984941258.0
[2026-01-09 20:09:45] 2026-01-09 19:08:38,542 | INFO     | sum of deviations: -8788783437.000004
[2026-01-09 20:09:45] 2026-01-09 19:08:38,542 | INFO     | mean x: 1767981247.0
[2026-01-09 20:09:45] 2026-01-09 19:08:38,543 | INFO     | mean y: 2510407.0272108843
[2026-01-09 20:09:45] 2026-01-09 19:08:38,543 | INFO     | intersect: 15778480978.218588
[2026-01-09 20:09:45] 2026-01-09 19:08:38,543 | INFO     | chi2: 2.364919288948174
[2026-01-09 20:09:45] 2026-01-09 19:08:38,543 | INFO     | sum of square deviations: 887813855.5
[2026-01-09 20:09:45] 2026-01-09 19:08:38,544 | INFO     | sum of deviations: 1235608313.9999995
[2026-01-09 20:09:45] 2026-01-09 19:08:38,544 | INFO     | mean x: 1767981094.5
[2026-01-09 20:09:45] 2026-01-09 19:08:38,545 | INFO     | mean y: 2525728.676056338
[2026-01-09 20:09:45] 2026-01-09 19:08:38,545 | INFO     | intersect: -2458048777.8219657
[2026-01-09 20:09:45] 2026-01-09 19:08:38,545 | INFO     | chi2: 1.6087429527232027
[2026-01-09 20:09:45] 2026-01-09 19:08:38,545 | INFO     | current chi2=1.6087429527232027 (change=31.974720649400666 %)
[2026-01-09 20:09:45] 2026-01-09 19:08:38,545 | INFO     | sum of square deviations: 797291228.0
[2026-01-09 20:09:45] 2026-01-09 19:08:38,546 | INFO     | sum of deviations: 1327549343.999987
[2026-01-09 20:09:45] 2026-01-09 19:08:38,546 | INFO     | mean x: 1767980942.0
[2026-01-09 20:09:45] 2026-01-09 19:08:38,547 | INFO     | mean y: 2525883.576642336
[2026-01-09 20:09:45] 2026-01-09 19:08:38,547 | INFO     | intersect: -2941294212.932156
[2026-01-09 20:09:45] 2026-01-09 19:08:38,547 | INFO     | chi2: 1.6095540202821017
[2026-01-09 20:09:45] 2026-01-09 19:08:38,547 | INFO     | current chi2=1.6095540202821017 (change=-0.05041623073009275 %)
[2026-01-09 20:09:45] 2026-01-09 19:08:38,547 | INFO     | right removable region: 136
[2026-01-09 20:09:45] 2026-01-09 19:08:38,548 | INFO     | sum of square deviations: 887813855.5
[2026-01-09 20:09:45] 2026-01-09 19:08:38,548 | INFO     | sum of deviations: -30638713573.0
[2026-01-09 20:09:45] 2026-01-09 19:08:38,549 | INFO     | mean x: 1767981399.5
[2026-01-09 20:09:45] 2026-01-09 19:08:38,549 | INFO     | mean y: 2544163.028169014
[2026-01-09 20:09:45] 2026-01-09 19:08:38,549 | INFO     | intersect: 61016094882.13179
[2026-01-09 20:09:45] 2026-01-09 19:08:38,549 | INFO     | chi2: 0.9170802262512074
[2026-01-09 20:09:45] 2026-01-09 19:08:38,549 | INFO     | current chi2=0.9170802262512074 (change=61.221500009030336 %)
[2026-01-09 20:09:45] 2026-01-09 19:08:38,550 | INFO     | sum of square deviations: 797291228.0
[2026-01-09 20:09:45] 2026-01-09 19:08:38,550 | INFO     | sum of deviations: -28183966762.000008
[2026-01-09 20:09:45] 2026-01-09 19:08:38,551 | INFO     | mean x: 1767981552.0
[2026-01-09 20:09:45] 2026-01-09 19:08:38,551 | INFO     | mean y: 2539953.722627737
[2026-01-09 20:09:45] 2026-01-09 19:08:38,551 | INFO     | intersect: 62500071028.27396
[2026-01-09 20:09:45] 2026-01-09 19:08:38,551 | INFO     | chi2: 0.906879083055399
[2026-01-09 20:09:45] 2026-01-09 19:08:38,551 | INFO     | current chi2=0.906879083055399 (change=1.1123501416564339 %)
[2026-01-09 20:09:45] 2026-01-09 19:08:38,551 | INFO     | left removable region: 20
[2026-01-09 20:09:45] 2026-01-09 19:08:38,552 | INFO     | sum of square deviations: 483971865.0
[2026-01-09 20:09:45] 2026-01-09 19:08:38,552 | INFO     | sum of deviations: -9432641090.5
[2026-01-09 20:09:45] 2026-01-09 19:08:38,552 | INFO     | mean x: 1767981521.5
[2026-01-09 20:09:45] 2026-01-09 19:08:38,553 | INFO     | mean y: 2541515.129310345
[2026-01-09 20:09:45] 2026-01-09 19:08:38,553 | INFO     | intersect: 34460608921.4766
[2026-01-09 20:09:45] 2026-01-09 19:08:38,553 | INFO     | chi2: 0.08940813480366869
[2026-01-09 20:09:45] 2026-01-09 19:08:38,553 | INFO     | current memory leak: -19.49 B/s (using 116 data points, chi2=0.09)
[2026-01-09 20:09:45] 2026-01-09 19:08:38,554 | INFO     | could have reported an average CPU frequency of 2250 MHz (8 samples)
[2026-01-09 20:09:45] 2026-01-09 19:08:38,554 | INFO     | ..............................
[2026-01-09 20:09:45] 2026-01-09 19:08:38,554 | INFO     | . Timing measurements:
[2026-01-09 20:09:45] 2026-01-09 19:08:38,554 | INFO     | . get job = 0 s
[2026-01-09 20:09:45] 2026-01-09 19:08:38,554 | INFO     | . initial setup = 1 s
[2026-01-09 20:09:45] 2026-01-09 19:08:38,554 | INFO     | . payload setup = 6 s
[2026-01-09 20:09:45] 2026-01-09 19:08:38,554 | INFO     | . stage-in = 0 s
[2026-01-09 20:09:45] 2026-01-09 19:08:38,555 | INFO     | . payload execution = 8916 s
[2026-01-09 20:09:45] 2026-01-09 19:08:38,555 | INFO     | . stage-out = 0 s
[2026-01-09 20:09:45] 2026-01-09 19:08:38,555 | INFO     | . log creation = 0 s
[2026-01-09 20:09:45] 2026-01-09 19:08:38,555 | INFO     | ..............................
[2026-01-09 20:09:45] 2026-01-09 19:08:38,696 | INFO     | 
[2026-01-09 20:09:45] 2026-01-09 19:08:38,696 | INFO     | job summary report
[2026-01-09 20:09:45] 2026-01-09 19:08:38,696 | INFO     | --------------------------------------------------
[2026-01-09 20:09:45] 2026-01-09 19:08:38,696 | INFO     | PanDA job id: 6963162786
[2026-01-09 20:09:45] 2026-01-09 19:08:38,696 | INFO     | task id: 47898826
[2026-01-09 20:09:45] 2026-01-09 19:08:38,696 | INFO     | errors: (none)
[2026-01-09 20:09:45] 2026-01-09 19:08:38,697 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 20:09:45] 2026-01-09 19:08:38,697 | INFO     | pilot state: finished 
[2026-01-09 20:09:45] 2026-01-09 19:08:38,697 | INFO     | transexitcode: 0
[2026-01-09 20:09:45] 2026-01-09 19:08:38,697 | INFO     | exeerrorcode: 0
[2026-01-09 20:09:45] 2026-01-09 19:08:38,697 | INFO     | exeerrordiag: 
[2026-01-09 20:09:45] 2026-01-09 19:08:38,697 | INFO     | exitcode: 0
[2026-01-09 20:09:45] 2026-01-09 19:08:38,697 | INFO     | exitmsg: OK
[2026-01-09 20:09:45] 2026-01-09 19:08:38,697 | INFO     | cpuconsumptiontime: 67904 s
[2026-01-09 20:09:45] 2026-01-09 19:08:38,697 | INFO     | nevents: 400
[2026-01-09 20:09:45] 2026-01-09 19:08:38,697 | INFO     | neventsw: 0
[2026-01-09 20:09:45] 2026-01-09 19:08:38,697 | INFO     | pid: 6024
[2026-01-09 20:09:45] 2026-01-09 19:08:38,698 | INFO     | pgrp: 6024
[2026-01-09 20:09:45] 2026-01-09 19:08:38,698 | INFO     | corecount: 8
[2026-01-09 20:09:45] 2026-01-09 19:08:38,698 | INFO     | event service: False
[2026-01-09 20:09:45] 2026-01-09 19:08:38,698 | INFO     | sizes: {0: 2283801, 1: 2284000, 5: 2284262, 11: 2284318, 8926: 2312141, 8928: 2321141, 8929: 2321325, 8937: 2321519}
[2026-01-09 20:09:45] 2026-01-09 19:08:38,698 | INFO     | --------------------------------------------------
[2026-01-09 20:09:45] 2026-01-09 19:08:38,698 | INFO     | 
[2026-01-09 20:09:45] 2026-01-09 19:08:38,698 | INFO     | executing command: ls -lF /var/lib/boinc/slots/16
[2026-01-09 20:09:45] 2026-01-09 19:08:38,721 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 20:09:45] 2026-01-09 19:08:38,721 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 20:09:45] 2026-01-09 19:08:38,721 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 20:09:45] 2026-01-09 19:08:38,721 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 20:09:45] 2026-01-09 19:08:38,722 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 20:09:45] 2026-01-09 19:08:38,722 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 20:09:45] 2026-01-09 19:08:38,722 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 20:09:45] 2026-01-09 19:08:38,722 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 20:09:45] 2026-01-09 19:08:38,722 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 20:09:45] 2026-01-09 19:08:38,722 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 20:09:45] 2026-01-09 19:08:38,722 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 20:09:45] 2026-01-09 19:08:38,722 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 20:09:45] 2026-01-09 19:08:38,722 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 20:09:45] 2026-01-09 19:08:38,723 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 20:09:45] 2026-01-09 19:08:38,723 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 20:09:45] 2026-01-09 19:08:38,723 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 20:09:45] 2026-01-09 19:08:38,723 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 20:09:45] 2026-01-09 19:08:38,723 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 20:09:45] 2026-01-09 19:08:38,723 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 20:09:45] 2026-01-09 19:08:38,723 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 20:09:45] 2026-01-09 19:08:38,723 | INFO     | job 6963162786 has completed (purged errors)
[2026-01-09 20:09:45] 2026-01-09 19:08:38,724 | INFO     | overall cleanup function is called
[2026-01-09 20:09:45] 2026-01-09 19:08:39,731 | INFO     | --- collectZombieJob: --- 10, [6024]
[2026-01-09 20:09:45] 2026-01-09 19:08:39,732 | INFO     | zombie collector waiting for pid 6024
[2026-01-09 20:09:45] 2026-01-09 19:08:39,732 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 20:09:45] 2026-01-09 19:08:39,732 | INFO     | collected zombie processes
[2026-01-09 20:09:45] 2026-01-09 19:08:39,732 | INFO     | will attempt to kill all subprocesses of pid=6024
[2026-01-09 20:09:45] 2026-01-09 19:08:39,793 | INFO     | process IDs to be killed: [6024] (in reverse order)
[2026-01-09 20:09:45] 2026-01-09 19:08:39,836 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 20:09:45] 2026-01-09 19:08:39,836 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 20:09:45] 2026-01-09 19:08:39,838 | INFO     | did not find any defunct processes belonging to 6024
[2026-01-09 20:09:45] 2026-01-09 19:08:39,840 | INFO     | did not find any defunct processes belonging to 6024
[2026-01-09 20:09:45] 2026-01-09 19:08:39,840 | INFO     | ready for new job
[2026-01-09 20:09:45] 2026-01-09 19:08:39,840 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 20:09:45] 2026-01-09 19:08:39,842 | INFO     | ***************************************
[2026-01-09 20:09:45] 2026-01-09 19:08:39,842 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 20:09:45] 2026-01-09 19:08:39,842 | INFO     | ***************************************
[2026-01-09 20:09:45] 2026-01-09 19:08:39,842 | INFO     | 
[2026-01-09 20:09:45] 2026-01-09 19:08:39,843 | INFO     | pilot is running in a VM
[2026-01-09 20:09:45] 2026-01-09 19:08:39,843 | INFO     | architecture information:
[2026-01-09 20:09:45] 2026-01-09 19:08:39,843 | INFO     | executing command: cat /etc/os-release
[2026-01-09 20:09:45] 2026-01-09 19:08:39,861 | INFO     | cat /etc/os-release:
[2026-01-09 20:09:45] NAME="CentOS Linux"
[2026-01-09 20:09:45] VERSION="7 (Core)"
[2026-01-09 20:09:45] ID="centos"
[2026-01-09 20:09:45] ID_LIKE="rhel fedora"
[2026-01-09 20:09:45] VERSION_ID="7"
[2026-01-09 20:09:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 20:09:45] ANSI_COLOR="0;31"
[2026-01-09 20:09:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 20:09:45] HOME_URL="https://www.centos.org/"
[2026-01-09 20:09:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 20:09:45] 
[2026-01-09 20:09:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 20:09:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 20:09:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 20:09:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 20:09:45] 
[2026-01-09 20:09:45] 2026-01-09 19:08:39,861 | INFO     | ***************************************
[2026-01-09 20:09:45] 2026-01-09 19:08:40,364 | INFO     | executing command: df -mP /var/lib/boinc/slots/16
[2026-01-09 20:09:45] 2026-01-09 19:08:40,383 | INFO     | sufficient remaining disk space (497989713920 B)
[2026-01-09 20:09:45] 2026-01-09 19:08:40,384 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 20:09:45] 2026-01-09 19:08:40,384 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 20:09:45] 2026-01-09 19:08:40,384 | INFO     | update_server=False
[2026-01-09 20:09:45] 2026-01-09 19:08:40,384 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 20:09:45] 2026-01-09 19:08:40,384 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 20:09:45] 2026-01-09 19:08:40,385 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 20:09:45] 2026-01-09 19:08:40,437 | INFO     | all data control threads have been joined
[2026-01-09 20:09:45] 2026-01-09 19:08:40,677 | INFO     | all job control threads have been joined
[2026-01-09 20:09:45] 2026-01-09 19:08:40,809 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 20:09:45] 2026-01-09 19:08:40,810 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 20:09:45] 2026-01-09 19:08:40,810 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 20:09:45] 2026-01-09 19:08:40,810 | INFO     | will abort loop
[2026-01-09 20:09:45] 2026-01-09 19:08:41,285 | INFO     | all payload control threads have been joined
[2026-01-09 20:09:45] 2026-01-09 19:08:41,331 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 20:09:45] 2026-01-09 19:08:41,390 | INFO     | [job] retrieve thread has finished
[2026-01-09 20:09:45] 2026-01-09 19:08:41,391 | INFO     | [job] queue monitor thread has finished
[2026-01-09 20:09:45] 2026-01-09 19:08:41,443 | INFO     | [data] control thread has finished
[2026-01-09 20:09:45] 2026-01-09 19:08:41,543 | INFO     | [payload] validate_post thread has finished
[2026-01-09 20:09:45] 2026-01-09 19:08:41,618 | INFO     | [job] validate thread has finished
[2026-01-09 20:09:45] 2026-01-09 19:08:41,682 | INFO     | [job] control thread has finished
[2026-01-09 20:09:45] 2026-01-09 19:08:41,715 | INFO     | [payload] failed_post thread has finished
[2026-01-09 20:09:45] 2026-01-09 19:08:41,816 | INFO     | [job] job monitor thread has finished
[2026-01-09 20:09:45] 2026-01-09 19:08:42,142 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 20:09:45] 2026-01-09 19:08:42,275 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 20:09:45] 2026-01-09 19:08:42,291 | INFO     | [payload] control thread has finished
[2026-01-09 20:09:45] 2026-01-09 19:08:42,345 | INFO     | [data] copytool_in thread has finished
[2026-01-09 20:09:45] 2026-01-09 19:08:42,391 | INFO     | [data] copytool_out thread has finished
[2026-01-09 20:09:45] 2026-01-09 19:08:42,891 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 20:09:45] 2026-01-09 19:08:45,337 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 20:09:45] 2026-01-09 19:08:50,838 | INFO     | job.realtimelogging is not enabled
[2026-01-09 20:09:45] 2026-01-09 19:08:51,844 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 20:09:45] 2026-01-09 19:09:10,276 | INFO     | PID=31972 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 20:09:45] 2026-01-09 19:09:10,276 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 20:09:45] 2026-01-09 19:09:10,276 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 20:09:45] 2026-01-09 19:09:10,277 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 20:09:45] 2026-01-09 19:09:32,624 [wrapper] supervise_pilot (15 min periods counter: 11)
[2026-01-09 20:09:45] 2026-01-09 19:09:39,516 | INFO     | [monitor] cgroup control has ended
[2026-01-09 20:09:45] 2026-01-09 19:09:40,344 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140151392347968)>', '<ExcThread(monitor, started 140150780700416)>']
[2026-01-09 20:09:45] 2026-01-09 19:09:40,431 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 20:09:45] 2026-01-09 19:09:40,431 | INFO     | [monitor] control thread has ended
[2026-01-09 20:09:45] 2026-01-09 19:09:45,354 | INFO     | all workflow threads have been joined
[2026-01-09 20:09:45] 2026-01-09 19:09:45,354 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 20:09:45] 2026-01-09 19:09:45,355 | INFO     | traces error code: 0
[2026-01-09 20:09:45] 2026-01-09 19:09:45,355 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 20:09:45] 2026-01-09 19:09:45,477 [wrapper] ==== pilot stdout END ====
[2026-01-09 20:09:45] 2026-01-09 19:09:45,480 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 20:09:45] 2026-01-09 19:09:45,483 [wrapper] pilotpid: 31972
[2026-01-09 20:09:45] 2026-01-09 19:09:45,487 [wrapper] Pilot exit status: 0
[2026-01-09 20:09:45] 2026-01-09 19:09:45,501 [wrapper] pandaids: 6963162786
[2026-01-09 20:09:45] 2026-01-09 19:09:45,536 [wrapper] cleanup supervisor_pilot 25242 31973
[2026-01-09 20:09:45] 2026-01-09 19:09:45,542 [wrapper] Test setup, not cleaning
[2026-01-09 20:09:45] 2026-01-09 19:09:45,546 [wrapper] apfmon messages muted
[2026-01-09 20:09:45] 2026-01-09 19:09:45,550 [wrapper] ==== wrapper stdout END ====
[2026-01-09 20:09:45] 2026-01-09 19:09:45,553 [wrapper] ==== wrapper stderr END ====
[2026-01-09 20:09:45]  *** Error codes and diagnostics ***
[2026-01-09 20:09:45]     "exeErrorCode": 0,
[2026-01-09 20:09:45]     "exeErrorDiag": "",
[2026-01-09 20:09:45]     "pilotErrorCode": 0,
[2026-01-09 20:09:45]     "pilotErrorDiag": "",
[2026-01-09 20:09:45]  *** Listing of results directory ***
[2026-01-09 20:09:45] total 439632
[2026-01-09 20:09:45] -rw-r--r--. 1 boinc boinc    579449 Jan  9 01:55 pilot3.tar.gz
[2026-01-09 20:09:45] -rwx------. 1 boinc boinc     36322 Jan  9 01:56 runpilot2-wrapper.sh
[2026-01-09 20:09:45] -rw-r--r--. 1 boinc boinc      5112 Jan  9 01:56 queuedata.json
[2026-01-09 20:09:45] -rw-r--r--. 1 boinc boinc       100 Jan  9 17:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 20:09:45] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 17:39 run_atlas
[2026-01-09 20:09:45] -rw-r--r--. 1 boinc boinc       105 Jan  9 17:39 job.xml
[2026-01-09 20:09:45] -rw-r--r--. 1 boinc boinc      6391 Jan  9 17:39 init_data.xml
[2026-01-09 20:09:45] -rw-r--r--. 2 boinc boinc 223583834 Jan  9 17:39 EVNT.47898824._001309.pool.root.1
[2026-01-09 20:09:45] -rw-r--r--. 2 boinc boinc     15847 Jan  9 17:39 start_atlas.sh
[2026-01-09 20:09:45] drwxrwx--x. 2 boinc boinc        68 Jan  9 17:39 shared
[2026-01-09 20:09:45] -rw-r--r--. 2 boinc boinc    592405 Jan  9 17:39 input.tar.gz
[2026-01-09 20:09:45] -rw-r--r--. 1 boinc boinc         0 Jan  9 17:39 boinc_lockfile
[2026-01-09 20:09:45] -rw-r--r--. 1 boinc boinc      2520 Jan  9 17:39 pandaJob.out
[2026-01-09 20:09:45] -rw-------. 1 boinc boinc    989356 Jan  9 17:39 agis_schedconf.cvmfs.json
[2026-01-09 20:09:45] -rw-------. 1 boinc boinc   1516240 Jan  9 17:39 agis_ddmendpoints.agis.ALL.json
[2026-01-09 20:09:45] drwx------. 5 boinc boinc      4096 Jan  9 17:39 pilot3
[2026-01-09 20:09:45] -rw-r--r--. 1 boinc boinc       530 Jan  9 20:07 boinc_task_state.xml
[2026-01-09 20:09:45] -rw-------. 1 boinc boinc 219523312 Jan  9 20:07 HITS.47898826._034342.pool.root.1
[2026-01-09 20:09:45] -rw-------. 1 boinc boinc        95 Jan  9 20:08 pilot_heartbeat.json
[2026-01-09 20:09:45] -rw-------. 1 boinc boinc      1015 Jan  9 20:08 memory_monitor_summary.json
[2026-01-09 20:09:45] -rw-------. 1 boinc boinc    388435 Jan  9 20:08 log.47898826._034342.job.log.tgz.1
[2026-01-09 20:09:45] -rw-------. 1 boinc boinc      7774 Jan  9 20:08 heartbeat.json
[2026-01-09 20:09:45] -rw-r--r--. 1 boinc boinc      8192 Jan  9 20:09 boinc_mmap_file
[2026-01-09 20:09:45] -rw-r--r--. 1 boinc boinc        27 Jan  9 20:09 wrapper_checkpoint.txt
[2026-01-09 20:09:45] -rw-------. 1 boinc boinc      5068 Jan  9 20:09 pilotlog.txt
[2026-01-09 20:09:45] -rw-------. 1 boinc boinc   1204031 Jan  9 20:09 log.47898826._034342.job.log.1
[2026-01-09 20:09:45] -rw-------. 1 boinc boinc       357 Jan  9 20:09 output.list
[2026-01-09 20:09:45] -rw-r--r--. 1 boinc boinc       620 Jan  9 20:09 runtime_log
[2026-01-09 20:09:45] -rw-------. 1 boinc boinc   1607680 Jan  9 20:09 result.tar.gz
[2026-01-09 20:09:45] -rw-r--r--. 1 boinc boinc      8832 Jan  9 20:09 runtime_log.err
[2026-01-09 20:09:45] -rw-------. 1 boinc boinc       652 Jan  9 20:09 LpYNDmqyFy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmsTgKDmuAycan.diag
[2026-01-09 20:09:45] -rw-r--r--. 1 boinc boinc     20700 Jan  9 20:09 stderr.txt
[2026-01-09 20:09:45] HITS file was successfully produced:
[2026-01-09 20:09:45] -rw-------. 1 boinc boinc 219523312 Jan  9 20:07 shared/HITS.pool.root.1
[2026-01-09 20:09:45]  *** Contents of shared directory: ***
[2026-01-09 20:09:45] total 434892
[2026-01-09 20:09:45] -rw-r--r--. 2 boinc boinc 223583834 Jan  9 17:39 ATLAS.root_0
[2026-01-09 20:09:45] -rw-r--r--. 2 boinc boinc     15847 Jan  9 17:39 start_atlas.sh
[2026-01-09 20:09:45] -rw-r--r--. 2 boinc boinc    592405 Jan  9 17:39 input.tar.gz
[2026-01-09 20:09:45] -rw-------. 1 boinc boinc 219523312 Jan  9 20:07 HITS.pool.root.1
[2026-01-09 20:09:45] -rw-------. 1 boinc boinc   1607680 Jan  9 20:09 result.tar.gz
20:09:47 (28232): run_atlas exited; CPU time 67956.928501
20:09:47 (28232): called boinc_finish(0)

</stderr_txt>
]]>

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