Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:30:09 (2621632): wrapper (7.7.26015): starting
09:30:09 (2621632): wrapper: running run_atlas (--nthreads 9)
[2026-01-09 09:30:09] Arguments: --nthreads 9
[2026-01-09 09:30:09] Threads: 9
[2026-01-09 09:30:09] Checking for CVMFS
[2026-01-09 09:30:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 09:30:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 09:30:09] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 09:30:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 09:30:10] 2.13.3.0 2033223 17024 209232 154946 1 661 26295792 40960001 23143 16776704 0 66961350 99.618 71743230 36097 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 09:30:10] CVMFS is ok
[2026-01-09 09:30:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 09:30:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 09:30:10] Further information can be found at the LHC@home message board.
[2026-01-09 09:30:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 09:30:10] Checking for apptainer binary...
[2026-01-09 09:30:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 09:30:10] Running /usr/bin/apptainer --version
[2026-01-09 09:30:10] apptainer version 1.4.5-2.el9
[2026-01-09 09:30:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 09:30:10] c-212-17.aglt2.org
[2026-01-09 09:30:10] apptainer works
[2026-01-09 09:30:10] Set ATHENA_PROC_NUMBER=9
[2026-01-09 09:30:10] Set ATHENA_CORE_NUMBER=9
[2026-01-09 09:30:10] Starting ATLAS job with PandaID=6963166834
[2026-01-09 09:30:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 12:03:48]  *** The last 200 lines of the pilot log: ***
[2026-01-09 12:03:48] 2026-01-09 17:03:02,498 | INFO     | time since job start (9156s) is within the limit (349056.0s)
[2026-01-09 12:03:48] 2026-01-09 17:03:03,217 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 12:03:48] 2026-01-09 17:03:03,229 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3229.3043645833327
[2026-01-09 12:03:48] 2026-01-09 17:03:03,242 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963166834/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 12:03:48] 2026-01-09 17:03:03,244 | INFO     | extracted standard info from prmon json
[2026-01-09 12:03:48] 2026-01-09 17:03:03,245 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 12:03:48] 2026-01-09 17:03:03,245 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 12:03:48] 2026-01-09 17:03:03,245 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 12:03:48] 2026-01-09 17:03:03,245 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 12:03:48] 2026-01-09 17:03:03,248 | INFO     | fitting pss+swap vs Time
[2026-01-09 12:03:48] 2026-01-09 17:03:03,267 | INFO     | sum of square deviations: 1046507495.333334
[2026-01-09 12:03:48] 2026-01-09 17:03:03,267 | INFO     | sum of deviations: -12590162521.866667
[2026-01-09 12:03:48] 2026-01-09 17:03:03,267 | INFO     | mean x: 1767973609.5333333
[2026-01-09 12:03:48] 2026-01-09 17:03:03,268 | INFO     | mean y: 2549619.0733333332
[2026-01-09 12:03:48] 2026-01-09 17:03:03,268 | INFO     | intersect: 21272416464.418705
[2026-01-09 12:03:48] 2026-01-09 17:03:03,268 | INFO     | chi2: 2.591326929812844
[2026-01-09 12:03:48] 2026-01-09 17:03:03,268 | INFO     | sum of square deviations: 945307122.8275877
[2026-01-09 12:03:48] 2026-01-09 17:03:03,269 | INFO     | sum of deviations: -1868770043.1379352
[2026-01-09 12:03:48] 2026-01-09 17:03:03,269 | INFO     | mean x: 1767973457.0344827
[2026-01-09 12:03:48] 2026-01-09 17:03:03,269 | INFO     | mean y: 2565357.827586207
[2026-01-09 12:03:48] 2026-01-09 17:03:03,269 | INFO     | intersect: 3497657856.1115026
[2026-01-09 12:03:48] 2026-01-09 17:03:03,269 | INFO     | chi2: 1.8014841966087123
[2026-01-09 12:03:48] 2026-01-09 17:03:03,269 | INFO     | current chi2=1.8014841966087123 (change=30.480242539723747 %)
[2026-01-09 12:03:48] 2026-01-09 17:03:03,269 | INFO     | sum of square deviations: 850851062.821431
[2026-01-09 12:03:48] 2026-01-09 17:03:03,270 | INFO     | sum of deviations: -1617122185.7857127
[2026-01-09 12:03:48] 2026-01-09 17:03:03,270 | INFO     | mean x: 1767973304.5357144
[2026-01-09 12:03:48] 2026-01-09 17:03:03,270 | INFO     | mean y: 2565763.9571428574
[2026-01-09 12:03:48] 2026-01-09 17:03:03,270 | INFO     | intersect: 3362764721.881711
[2026-01-09 12:03:48] 2026-01-09 17:03:03,270 | INFO     | chi2: 1.8017645250957663
[2026-01-09 12:03:48] 2026-01-09 17:03:03,270 | INFO     | current chi2=1.8017645250957663 (change=-0.0155609739781108 %)
[2026-01-09 12:03:48] 2026-01-09 17:03:03,270 | INFO     | right removable region: 139
[2026-01-09 12:03:48] 2026-01-09 17:03:03,271 | INFO     | sum of square deviations: 945304072.8275877
[2026-01-09 12:03:48] 2026-01-09 17:03:03,271 | INFO     | sum of deviations: -35325124632.93102
[2026-01-09 12:03:48] 2026-01-09 17:03:03,271 | INFO     | mean x: 1767973762.0344827
[2026-01-09 12:03:48] 2026-01-09 17:03:03,272 | INFO     | mean y: 2583271.5862068967
[2026-01-09 12:03:48] 2026-01-09 17:03:03,272 | INFO     | intersect: 66070100895.63318
[2026-01-09 12:03:48] 2026-01-09 17:03:03,273 | INFO     | chi2: 0.9849760634279572
[2026-01-09 12:03:48] 2026-01-09 17:03:03,273 | INFO     | current chi2=0.9849760634279572 (change=61.9895100036993 %)
[2026-01-09 12:03:48] 2026-01-09 17:03:03,273 | INFO     | sum of square deviations: 850844962.821431
[2026-01-09 12:03:48] 2026-01-09 17:03:03,273 | INFO     | sum of deviations: -30646180132.28573
[2026-01-09 12:03:48] 2026-01-09 17:03:03,274 | INFO     | mean x: 1767973914.5357144
[2026-01-09 12:03:48] 2026-01-09 17:03:03,274 | INFO     | mean y: 2575644.057142857
[2026-01-09 12:03:48] 2026-01-09 17:03:03,274 | INFO     | intersect: 63682387385.99382
[2026-01-09 12:03:48] 2026-01-09 17:03:03,274 | INFO     | chi2: 0.9688546848628191
[2026-01-09 12:03:48] 2026-01-09 17:03:03,274 | INFO     | current chi2=0.9688546848628191 (change=1.6367279534724666 %)
[2026-01-09 12:03:48] 2026-01-09 17:03:03,274 | INFO     | left removable region: 20
[2026-01-09 12:03:48] 2026-01-09 17:03:03,274 | INFO     | sum of square deviations: 522522832.78991646
[2026-01-09 12:03:48] 2026-01-09 17:03:03,275 | INFO     | sum of deviations: -7252095531.428571
[2026-01-09 12:03:48] 2026-01-09 17:03:03,275 | INFO     | mean x: 1767973884.0420167
[2026-01-09 12:03:48] 2026-01-09 17:03:03,275 | INFO     | mean y: 2570012.285714286
[2026-01-09 12:03:48] 2026-01-09 17:03:03,275 | INFO     | intersect: 24540283389.68083
[2026-01-09 12:03:48] 2026-01-09 17:03:03,275 | INFO     | chi2: 0.058342960397835666
[2026-01-09 12:03:48] 2026-01-09 17:03:03,275 | INFO     | current memory leak: -13.88 B/s (using 119 data points, chi2=0.06)
[2026-01-09 12:03:48] 2026-01-09 17:03:03,276 | INFO     | could have reported an average CPU frequency of 3253 MHz (9 samples)
[2026-01-09 12:03:48] 2026-01-09 17:03:03,276 | INFO     | ..............................
[2026-01-09 12:03:48] 2026-01-09 17:03:03,276 | INFO     | . Timing measurements:
[2026-01-09 12:03:48] 2026-01-09 17:03:03,276 | INFO     | . get job = 0 s
[2026-01-09 12:03:48] 2026-01-09 17:03:03,276 | INFO     | . initial setup = 2 s
[2026-01-09 12:03:48] 2026-01-09 17:03:03,276 | INFO     | . payload setup = 11 s
[2026-01-09 12:03:48] 2026-01-09 17:03:03,276 | INFO     | . stage-in = 0 s
[2026-01-09 12:03:48] 2026-01-09 17:03:03,276 | INFO     | . payload execution = 9110 s
[2026-01-09 12:03:48] 2026-01-09 17:03:03,276 | INFO     | . stage-out = 1 s
[2026-01-09 12:03:48] 2026-01-09 17:03:03,276 | INFO     | . log creation = 0 s
[2026-01-09 12:03:48] 2026-01-09 17:03:03,276 | INFO     | ..............................
[2026-01-09 12:03:48] 2026-01-09 17:03:03,427 | INFO     | 
[2026-01-09 12:03:48] 2026-01-09 17:03:03,428 | INFO     | job summary report
[2026-01-09 12:03:48] 2026-01-09 17:03:03,428 | INFO     | --------------------------------------------------
[2026-01-09 12:03:48] 2026-01-09 17:03:03,428 | INFO     | PanDA job id: 6963166834
[2026-01-09 12:03:48] 2026-01-09 17:03:03,428 | INFO     | task id: 47898826
[2026-01-09 12:03:48] 2026-01-09 17:03:03,428 | INFO     | errors: (none)
[2026-01-09 12:03:48] 2026-01-09 17:03:03,429 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 12:03:48] 2026-01-09 17:03:03,429 | INFO     | pilot state: finished 
[2026-01-09 12:03:48] 2026-01-09 17:03:03,429 | INFO     | transexitcode: 0
[2026-01-09 12:03:48] 2026-01-09 17:03:03,429 | INFO     | exeerrorcode: 0
[2026-01-09 12:03:48] 2026-01-09 17:03:03,429 | INFO     | exeerrordiag: 
[2026-01-09 12:03:48] 2026-01-09 17:03:03,429 | INFO     | exitcode: 0
[2026-01-09 12:03:48] 2026-01-09 17:03:03,429 | INFO     | exitmsg: OK
[2026-01-09 12:03:48] 2026-01-09 17:03:03,429 | INFO     | cpuconsumptiontime: 47016 s
[2026-01-09 12:03:48] 2026-01-09 17:03:03,429 | INFO     | nevents: 400
[2026-01-09 12:03:48] 2026-01-09 17:03:03,429 | INFO     | neventsw: 0
[2026-01-09 12:03:48] 2026-01-09 17:03:03,429 | INFO     | pid: 2643903
[2026-01-09 12:03:48] 2026-01-09 17:03:03,429 | INFO     | pgrp: 2643903
[2026-01-09 12:03:48] 2026-01-09 17:03:03,429 | INFO     | corecount: 9
[2026-01-09 12:03:48] 2026-01-09 17:03:03,429 | INFO     | event service: False
[2026-01-09 12:03:48] 2026-01-09 17:03:03,429 | INFO     | sizes: {0: 2283971, 8: 2284233, 11: 2284261, 9123: 2312657, 9124: 2312656, 9126: 2321710, 9129: 2321894, 9140: 2322152}
[2026-01-09 12:03:48] 2026-01-09 17:03:03,429 | INFO     | --------------------------------------------------
[2026-01-09 12:03:48] 2026-01-09 17:03:03,430 | INFO     | 
[2026-01-09 12:03:48] 2026-01-09 17:03:03,430 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-09 12:03:48] 2026-01-09 17:03:03,459 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 12:03:48] 2026-01-09 17:03:03,460 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 12:03:48] 2026-01-09 17:03:03,460 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 12:03:48] 2026-01-09 17:03:03,460 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 12:03:48] 2026-01-09 17:03:03,460 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 12:03:48] 2026-01-09 17:03:03,460 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 12:03:48] 2026-01-09 17:03:03,460 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 12:03:48] 2026-01-09 17:03:03,460 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 12:03:48] 2026-01-09 17:03:03,460 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 12:03:48] 2026-01-09 17:03:03,460 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 12:03:48] 2026-01-09 17:03:03,460 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 12:03:48] 2026-01-09 17:03:03,460 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 12:03:48] 2026-01-09 17:03:03,460 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 12:03:48] 2026-01-09 17:03:03,461 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 12:03:48] 2026-01-09 17:03:03,461 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 12:03:48] 2026-01-09 17:03:03,461 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 12:03:48] 2026-01-09 17:03:03,461 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 12:03:48] 2026-01-09 17:03:03,461 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 12:03:48] 2026-01-09 17:03:03,461 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 12:03:48] 2026-01-09 17:03:03,461 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 12:03:48] 2026-01-09 17:03:03,461 | INFO     | job 6963166834 has completed (purged errors)
[2026-01-09 12:03:48] 2026-01-09 17:03:03,461 | INFO     | overall cleanup function is called
[2026-01-09 12:03:48] 2026-01-09 17:03:04,470 | INFO     | --- collectZombieJob: --- 10, [2643903]
[2026-01-09 12:03:48] 2026-01-09 17:03:04,470 | INFO     | zombie collector waiting for pid 2643903
[2026-01-09 12:03:48] 2026-01-09 17:03:04,470 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 12:03:48] 2026-01-09 17:03:04,470 | INFO     | collected zombie processes
[2026-01-09 12:03:48] 2026-01-09 17:03:04,470 | INFO     | will attempt to kill all subprocesses of pid=2643903
[2026-01-09 12:03:48] 2026-01-09 17:03:05,841 | INFO     | process IDs to be killed: [2643903] (in reverse order)
[2026-01-09 12:03:48] 2026-01-09 17:03:06,110 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 12:03:48] 2026-01-09 17:03:06,110 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 12:03:48] 2026-01-09 17:03:06,177 | INFO     | did not find any defunct processes belonging to 2643903
[2026-01-09 12:03:48] 2026-01-09 17:03:06,214 | INFO     | did not find any defunct processes belonging to 2643903
[2026-01-09 12:03:48] 2026-01-09 17:03:06,215 | INFO     | ready for new job
[2026-01-09 12:03:48] 2026-01-09 17:03:06,215 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 12:03:48] 2026-01-09 17:03:06,216 | INFO     | ***************************************
[2026-01-09 12:03:48] 2026-01-09 17:03:06,217 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 12:03:48] 2026-01-09 17:03:06,217 | INFO     | ***************************************
[2026-01-09 12:03:48] 2026-01-09 17:03:06,217 | INFO     | 
[2026-01-09 12:03:48] 2026-01-09 17:03:06,221 | INFO     | architecture information:
[2026-01-09 12:03:48] 2026-01-09 17:03:06,222 | INFO     | executing command: cat /etc/os-release
[2026-01-09 12:03:48] 2026-01-09 17:03:06,237 | INFO     | cat /etc/os-release:
[2026-01-09 12:03:48] NAME="CentOS Linux"
[2026-01-09 12:03:48] VERSION="7 (Core)"
[2026-01-09 12:03:48] ID="centos"
[2026-01-09 12:03:48] ID_LIKE="rhel fedora"
[2026-01-09 12:03:48] VERSION_ID="7"
[2026-01-09 12:03:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 12:03:48] ANSI_COLOR="0;31"
[2026-01-09 12:03:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 12:03:48] HOME_URL="https://www.centos.org/"
[2026-01-09 12:03:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 12:03:48] 
[2026-01-09 12:03:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 12:03:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 12:03:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 12:03:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 12:03:48] 
[2026-01-09 12:03:48] 2026-01-09 17:03:06,238 | INFO     | ***************************************
[2026-01-09 12:03:48] 2026-01-09 17:03:06,742 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-09 12:03:48] 2026-01-09 17:03:06,771 | INFO     | sufficient remaining disk space (127283494912 B)
[2026-01-09 12:03:48] 2026-01-09 17:03:06,772 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 12:03:48] 2026-01-09 17:03:06,772 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 12:03:48] 2026-01-09 17:03:06,772 | INFO     | update_server=False
[2026-01-09 12:03:48] 2026-01-09 17:03:06,772 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 12:03:48] 2026-01-09 17:03:06,788 | INFO     | all data control threads have been joined
[2026-01-09 12:03:48] 2026-01-09 17:03:06,792 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:03:48] 2026-01-09 17:03:06,792 | INFO     | aborting loop
[2026-01-09 12:03:48] 2026-01-09 17:03:07,301 | INFO     | all payload control threads have been joined
[2026-01-09 12:03:48] 2026-01-09 17:03:07,403 | INFO     | all job control threads have been joined
[2026-01-09 12:03:48] 2026-01-09 17:03:07,420 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 12:03:48] 2026-01-09 17:03:07,784 | INFO     | [job] retrieve thread has finished
[2026-01-09 12:03:48] 2026-01-09 17:03:07,837 | INFO     | [job] job monitor thread has finished
[2026-01-09 12:03:48] 2026-01-09 17:03:07,860 | INFO     | [data] control thread has finished
[2026-01-09 12:03:48] 2026-01-09 17:03:07,878 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 12:03:48] 2026-01-09 17:03:08,066 | INFO     | [job] validate thread has finished
[2026-01-09 12:03:48] 2026-01-09 17:03:08,081 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 12:03:48] 2026-01-09 17:03:08,307 | INFO     | [payload] control thread has finished
[2026-01-09 12:03:48] 2026-01-09 17:03:08,408 | INFO     | [job] control thread has finished
[2026-01-09 12:03:48] 2026-01-09 17:03:08,443 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:03:48] 2026-01-09 17:03:08,590 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 12:03:48] 2026-01-09 17:03:09,053 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 12:03:48] 2026-01-09 17:03:09,075 | INFO     | [data] copytool_in thread has finished
[2026-01-09 12:03:48] 2026-01-09 17:03:09,133 | INFO     | [payload] validate_post thread has finished
[2026-01-09 12:03:48] 2026-01-09 17:03:09,272 | INFO     | [payload] failed_post thread has finished
[2026-01-09 12:03:48] 2026-01-09 17:03:09,453 | INFO     | [job] queue monitor thread has finished
[2026-01-09 12:03:48] 2026-01-09 17:03:10,093 | INFO     | [data] copytool_out thread has finished
[2026-01-09 12:03:48] 2026-01-09 17:03:11,434 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 12:03:48] 2026-01-09 17:03:17,178 | INFO     | job.realtimelogging is not enabled
[2026-01-09 12:03:48] 2026-01-09 17:03:18,186 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 12:03:48] 2026-01-09 17:03:37,597 | INFO     | PID=2630595 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 12:03:48] 2026-01-09 17:03:37,597 | INFO     | .. there are 28 such processes running
[2026-01-09 12:03:48] 2026-01-09 17:03:37,598 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 12:03:48] 2026-01-09 17:03:37,598 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 12:03:48] 2026-01-09 17:03:37,598 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 12:03:48] 2026-01-09 17:03:41,836 | INFO     | [monitor] cgroup control has ended
[2026-01-09 12:03:48] 2026-01-09 17:03:42,816 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140208951625536)>', '<ExcThread(monitor, started 140208603395840)>']
[2026-01-09 12:03:48] 2026-01-09 17:03:43,652 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 12:03:48] 2026-01-09 17:03:43,652 | INFO     | [monitor] control thread has ended
[2026-01-09 12:03:48] 2026-01-09 17:03:47,842 | INFO     | all workflow threads have been joined
[2026-01-09 12:03:48] 2026-01-09 17:03:47,842 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 12:03:48] 2026-01-09 17:03:47,843 | INFO     | traces error code: 0
[2026-01-09 12:03:48] 2026-01-09 17:03:47,843 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 12:03:48] 2026-01-09 17:03:48,365 [wrapper] ==== pilot stdout END ====
[2026-01-09 12:03:48] 2026-01-09 17:03:48,367 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 12:03:48] 2026-01-09 17:03:48,372 [wrapper] pilotpid: 2630595
[2026-01-09 12:03:48] 2026-01-09 17:03:48,374 [wrapper] Pilot exit status: 0
[2026-01-09 12:03:48] 2026-01-09 17:03:48,389 [wrapper] pandaids: 6963166834
[2026-01-09 12:03:48] 2026-01-09 17:03:48,497 [wrapper] cleanup supervisor_pilot 3988182 2630596
[2026-01-09 12:03:48] 2026-01-09 17:03:48,517 [wrapper] Test setup, not cleaning
[2026-01-09 12:03:48] 2026-01-09 17:03:48,521 [wrapper] apfmon messages muted
[2026-01-09 12:03:48] 2026-01-09 17:03:48,523 [wrapper] ==== wrapper stdout END ====
[2026-01-09 12:03:48] 2026-01-09 17:03:48,526 [wrapper] ==== wrapper stderr END ====
[2026-01-09 12:03:48]  *** Error codes and diagnostics ***
[2026-01-09 12:03:48]     "exeErrorCode": 0,
[2026-01-09 12:03:48]     "exeErrorDiag": "",
[2026-01-09 12:03:48]     "pilotErrorCode": 0,
[2026-01-09 12:03:48]     "pilotErrorDiag": "",
[2026-01-09 12:03:48]  *** Listing of results directory ***
[2026-01-09 12:03:48] total 447804
[2026-01-09 12:03:48] -rwx------. 1 boincer umatlas     36322 Jan  8 19:57 runpilot2-wrapper.sh
[2026-01-09 12:03:48] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 19:57 pilot3.tar.gz
[2026-01-09 12:03:48] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 19:57 queuedata.json
[2026-01-09 12:03:48] -rw-r--r--. 1 boincer umatlas       100 Jan  9 09:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 12:03:48] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 09:30 run_atlas
[2026-01-09 12:03:48] -rw-r--r--. 1 boincer umatlas       105 Jan  9 09:30 job.xml
[2026-01-09 12:03:48] -rw-r--r--. 2 boincer umatlas 226090053 Jan  9 09:30 EVNT.47898824._001365.pool.root.1
[2026-01-09 12:03:48] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 09:30 start_atlas.sh
[2026-01-09 12:03:48] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 09:30 shared
[2026-01-09 12:03:48] -rw-r--r--. 2 boincer umatlas    592393 Jan  9 09:30 input.tar.gz
[2026-01-09 12:03:48] -rw-r--r--. 1 boincer umatlas         0 Jan  9 09:30 boinc_lockfile
[2026-01-09 12:03:48] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 09:30 pandaJob.out
[2026-01-09 12:03:48] -rw-------. 1 boincer umatlas        57 Jan  9 09:30 setup.sh.local
[2026-01-09 12:03:48] -rw-------. 1 boincer umatlas    989377 Jan  9 09:30 agis_schedconf.cvmfs.json
[2026-01-09 12:03:48] -rw-------. 1 boincer umatlas   1516240 Jan  9 09:30 agis_ddmendpoints.agis.ALL.json
[2026-01-09 12:03:48] drwx------. 5 boincer umatlas      4096 Jan  9 09:30 pilot3
[2026-01-09 12:03:48] -rw-------. 1 boincer umatlas 225266999 Jan  9 12:02 HITS.47898826._035240.pool.root.1
[2026-01-09 12:03:48] -rw-r--r--. 1 boincer umatlas       529 Jan  9 12:02 boinc_task_state.xml
[2026-01-09 12:03:48] -rw-------. 1 boincer umatlas      1058 Jan  9 12:02 memory_monitor_summary.json
[2026-01-09 12:03:48] -rw-------. 1 boincer umatlas    412963 Jan  9 12:02 log.47898826._035240.job.log.tgz.1
[2026-01-09 12:03:48] -rw-------. 1 boincer umatlas      7818 Jan  9 12:03 heartbeat.json
[2026-01-09 12:03:48] -rw-r--r--. 1 boincer umatlas      6956 Jan  9 12:03 init_data.xml
[2026-01-09 12:03:48] -rw-------. 1 boincer umatlas        95 Jan  9 12:03 pilot_heartbeat.json
[2026-01-09 12:03:48] -rw-------. 1 boincer umatlas      4897 Jan  9 12:03 pilotlog.txt
[2026-01-09 12:03:48] -rw-r--r--. 1 boincer umatlas        27 Jan  9 12:03 wrapper_checkpoint.txt
[2026-01-09 12:03:48] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 12:03 boinc_mmap_file
[2026-01-09 12:03:48] -rw-------. 1 boincer umatlas   1225641 Jan  9 12:03 log.47898826._035240.job.log.1
[2026-01-09 12:03:48] -rw-------. 1 boincer umatlas       357 Jan  9 12:03 output.list
[2026-01-09 12:03:48] -rw-r--r--. 1 boincer umatlas       620 Jan  9 12:03 runtime_log
[2026-01-09 12:03:48] -rw-------. 1 boincer umatlas   1658880 Jan  9 12:03 result.tar.gz
[2026-01-09 12:03:48] -rw-r--r--. 1 boincer umatlas      9342 Jan  9 12:03 runtime_log.err
[2026-01-09 12:03:48] -rw-------. 1 boincer umatlas       657 Jan  9 12:03 M0jLDmQzFy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmsXgKDmlXlkKn.diag
[2026-01-09 12:03:48] -rw-r--r--. 1 boincer umatlas     21161 Jan  9 12:03 stderr.txt
[2026-01-09 12:03:48] HITS file was successfully produced:
[2026-01-09 12:03:48] -rw-------. 1 boincer umatlas 225266999 Jan  9 12:02 shared/HITS.pool.root.1
[2026-01-09 12:03:48]  *** Contents of shared directory: ***
[2026-01-09 12:03:48] total 443004
[2026-01-09 12:03:48] -rw-r--r--. 2 boincer umatlas 226090053 Jan  9 09:30 ATLAS.root_0
[2026-01-09 12:03:48] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 09:30 start_atlas.sh
[2026-01-09 12:03:48] -rw-r--r--. 2 boincer umatlas    592393 Jan  9 09:30 input.tar.gz
[2026-01-09 12:03:48] -rw-------. 1 boincer umatlas 225266999 Jan  9 12:02 HITS.pool.root.1
[2026-01-09 12:03:48] -rw-------. 1 boincer umatlas   1658880 Jan  9 12:03 result.tar.gz
12:03:49 (2621632): run_atlas exited; CPU time 47346.773019
12:03:49 (2621632): called boinc_finish(0)

</stderr_txt>
]]>

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