Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:49:49 (29236): wrapper (7.7.26015): starting
08:49:49 (29236): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 08:49:49] Arguments: --nthreads 12
[2026-01-09 08:49:49] Threads: 12
[2026-01-09 08:49:49] Checking for CVMFS
[2026-01-09 08:49:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 08:49:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 08:49:50] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 08:49:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 08:49:50] 2.11.2.0 723 181070 94580 154945 2 59 16312709 20275201 1 130560 0 70480598 99.901 10370214 36049 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 08:49:50] CVMFS is ok
[2026-01-09 08:49:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 08:49:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 08:49:50] Further information can be found at the LHC@home message board.
[2026-01-09 08:49:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 08:49:50] Checking for apptainer binary...
[2026-01-09 08:49:50] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 08:49:50] Running /usr/bin/apptainer --version
[2026-01-09 08:49:50] apptainer version 1.3.2-1.el7
[2026-01-09 08:49:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 08:49:51] c-205-1.aglt2.org
[2026-01-09 08:49:51] apptainer works
[2026-01-09 08:49:51] Set ATHENA_PROC_NUMBER=12
[2026-01-09 08:49:51] Set ATHENA_CORE_NUMBER=12
[2026-01-09 08:49:51] Starting ATLAS job with PandaID=6963162715
[2026-01-09 08:49:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 10:34:21]  *** The last 200 lines of the pilot log: ***
[2026-01-09 10:34:21] 2026-01-09 15:33:26,425 | INFO     | time since job start (6200s) is within the limit (349056.0s)
[2026-01-09 10:34:21] 2026-01-09 15:33:26,779 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 10:34:21] 2026-01-09 15:33:26,783 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1718.0
[2026-01-09 10:34:21] 2026-01-09 15:33:26,785 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963162715/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 10:34:21] 2026-01-09 15:33:26,786 | INFO     | extracted standard info from prmon json
[2026-01-09 10:34:21] 2026-01-09 15:33:26,786 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 10:34:21] 2026-01-09 15:33:26,787 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 10:34:21] 2026-01-09 15:33:26,787 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 10:34:21] 2026-01-09 15:33:26,787 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 10:34:21] 2026-01-09 15:33:26,789 | INFO     | fitting pss+swap vs Time
[2026-01-09 10:34:21] 2026-01-09 15:33:26,789 | INFO     | sum of square deviations: 319447850.0
[2026-01-09 10:34:21] 2026-01-09 15:33:26,789 | INFO     | sum of deviations: 8155364805.0
[2026-01-09 10:34:21] 2026-01-09 15:33:26,790 | INFO     | mean x: 1767969686.0
[2026-01-09 10:34:21] 2026-01-09 15:33:26,790 | INFO     | mean y: 2675833.792079208
[2026-01-09 10:34:21] 2026-01-09 15:33:26,790 | INFO     | intersect: -45132822037.02252
[2026-01-09 10:34:21] 2026-01-09 15:33:26,790 | INFO     | chi2: 1.5758161310202488
[2026-01-09 10:34:21] 2026-01-09 15:33:26,790 | INFO     | sum of square deviations: 274312120.0
[2026-01-09 10:34:21] 2026-01-09 15:33:26,791 | INFO     | sum of deviations: 7816185711.999998
[2026-01-09 10:34:21] 2026-01-09 15:33:26,791 | INFO     | mean x: 1767969533.5
[2026-01-09 10:34:21] 2026-01-09 15:33:26,791 | INFO     | mean y: 2674686.8958333335
[2026-01-09 10:34:21] 2026-01-09 15:33:26,791 | INFO     | intersect: -50373437775.77626
[2026-01-09 10:34:21] 2026-01-09 15:33:26,791 | INFO     | chi2: 1.5794555727775008
[2026-01-09 10:34:21] 2026-01-09 15:33:26,791 | INFO     | current chi2=1.5794555727775008 (change=-0.2309559907154735 %)
[2026-01-09 10:34:21] 2026-01-09 15:33:26,792 | INFO     | right removable region: 95
[2026-01-09 10:34:21] 2026-01-09 15:33:26,792 | INFO     | sum of square deviations: 274312120.0
[2026-01-09 10:34:21] 2026-01-09 15:33:26,792 | INFO     | sum of deviations: -8087874161.0
[2026-01-09 10:34:21] 2026-01-09 15:33:26,792 | INFO     | mean x: 1767969838.5
[2026-01-09 10:34:21] 2026-01-09 15:33:26,792 | INFO     | mean y: 2729562.4583333335
[2026-01-09 10:34:21] 2026-01-09 15:33:26,793 | INFO     | intersect: 52129910724.67418
[2026-01-09 10:34:21] 2026-01-09 15:33:26,793 | INFO     | chi2: 0.12624986248114917
[2026-01-09 10:34:21] 2026-01-09 15:33:26,793 | INFO     | current chi2=0.12624986248114917 (change=91.98828721220097 %)
[2026-01-09 10:34:21] 2026-01-09 15:33:26,793 | INFO     | sum of square deviations: 233641590.0
[2026-01-09 10:34:21] 2026-01-09 15:33:26,793 | INFO     | sum of deviations: -8683861607.0
[2026-01-09 10:34:21] 2026-01-09 15:33:26,794 | INFO     | mean x: 1767969991.0
[2026-01-09 10:34:21] 2026-01-09 15:33:26,794 | INFO     | mean y: 2731470.7802197803
[2026-01-09 10:34:21] 2026-01-09 15:33:26,794 | INFO     | intersect: 65713663874.437614
[2026-01-09 10:34:21] 2026-01-09 15:33:26,794 | INFO     | chi2: 0.08256141297790422
[2026-01-09 10:34:21] 2026-01-09 15:33:26,794 | INFO     | current chi2=0.08256141297790422 (change=34.60475017132651 %)
[2026-01-09 10:34:21] 2026-01-09 15:33:26,794 | INFO     | sum of square deviations: 197203697.5
[2026-01-09 10:34:21] 2026-01-09 15:33:26,795 | INFO     | sum of deviations: -5833772759.0
[2026-01-09 10:34:21] 2026-01-09 15:33:26,795 | INFO     | mean x: 1767970143.5
[2026-01-09 10:34:21] 2026-01-09 15:33:26,795 | INFO     | mean y: 2719511.6511627906
[2026-01-09 10:34:21] 2026-01-09 15:33:26,795 | INFO     | intersect: 52303645876.76468
[2026-01-09 10:34:21] 2026-01-09 15:33:26,795 | INFO     | chi2: 0.07368672941988788
[2026-01-09 10:34:21] 2026-01-09 15:33:26,795 | INFO     | current chi2=0.07368672941988788 (change=10.749190497007909 %)
[2026-01-09 10:34:21] 2026-01-09 15:33:26,795 | INFO     | left removable region: 30
[2026-01-09 10:34:21] 2026-01-09 15:33:26,796 | INFO     | sum of square deviations: 85136480.0
[2026-01-09 10:34:21] 2026-01-09 15:33:26,796 | INFO     | sum of deviations: 718151353.0
[2026-01-09 10:34:21] 2026-01-09 15:33:26,796 | INFO     | mean x: 1767970418.0
[2026-01-09 10:34:21] 2026-01-09 15:33:26,796 | INFO     | mean y: 2684482.1384615386
[2026-01-09 10:34:21] 2026-01-09 15:33:26,796 | INFO     | intersect: -14910668145.908592
[2026-01-09 10:34:21] 2026-01-09 15:33:26,796 | INFO     | chi2: 0.00016683152067309328
[2026-01-09 10:34:21] 2026-01-09 15:33:26,797 | INFO     | current memory leak: 8.44 B/s (using 65 data points, chi2=0.00)
[2026-01-09 10:34:21] 2026-01-09 15:33:26,797 | INFO     | could have reported an average CPU frequency of 2125 MHz (7 samples)
[2026-01-09 10:34:21] 2026-01-09 15:33:26,797 | INFO     | ..............................
[2026-01-09 10:34:21] 2026-01-09 15:33:26,797 | INFO     | . Timing measurements:
[2026-01-09 10:34:21] 2026-01-09 15:33:26,797 | INFO     | . get job = 0 s
[2026-01-09 10:34:21] 2026-01-09 15:33:26,797 | INFO     | . initial setup = 2 s
[2026-01-09 10:34:21] 2026-01-09 15:33:26,797 | INFO     | . payload setup = 7 s
[2026-01-09 10:34:21] 2026-01-09 15:33:26,798 | INFO     | . stage-in = 0 s
[2026-01-09 10:34:21] 2026-01-09 15:33:26,798 | INFO     | . payload execution = 6163 s
[2026-01-09 10:34:21] 2026-01-09 15:33:26,798 | INFO     | . stage-out = 0 s
[2026-01-09 10:34:21] 2026-01-09 15:33:26,798 | INFO     | . log creation = 0 s
[2026-01-09 10:34:21] 2026-01-09 15:33:26,798 | INFO     | ..............................
[2026-01-09 10:34:21] 2026-01-09 15:33:26,878 | INFO     | 
[2026-01-09 10:34:21] 2026-01-09 15:33:26,878 | INFO     | job summary report
[2026-01-09 10:34:21] 2026-01-09 15:33:26,878 | INFO     | --------------------------------------------------
[2026-01-09 10:34:21] 2026-01-09 15:33:26,879 | INFO     | PanDA job id: 6963162715
[2026-01-09 10:34:21] 2026-01-09 15:33:26,879 | INFO     | task id: 47898826
[2026-01-09 10:34:21] 2026-01-09 15:33:26,879 | INFO     | errors: (none)
[2026-01-09 10:34:21] 2026-01-09 15:33:26,879 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 10:34:21] 2026-01-09 15:33:26,879 | INFO     | pilot state: finished 
[2026-01-09 10:34:21] 2026-01-09 15:33:26,879 | INFO     | transexitcode: 0
[2026-01-09 10:34:21] 2026-01-09 15:33:26,880 | INFO     | exeerrorcode: 0
[2026-01-09 10:34:21] 2026-01-09 15:33:26,880 | INFO     | exeerrordiag: 
[2026-01-09 10:34:21] 2026-01-09 15:33:26,880 | INFO     | exitcode: 0
[2026-01-09 10:34:21] 2026-01-09 15:33:26,880 | INFO     | exitmsg: OK
[2026-01-09 10:34:21] 2026-01-09 15:33:26,880 | INFO     | cpuconsumptiontime: 66573 s
[2026-01-09 10:34:21] 2026-01-09 15:33:26,880 | INFO     | nevents: 400
[2026-01-09 10:34:21] 2026-01-09 15:33:26,881 | INFO     | neventsw: 0
[2026-01-09 10:34:21] 2026-01-09 15:33:26,881 | INFO     | pid: 8393
[2026-01-09 10:34:21] 2026-01-09 15:33:26,881 | INFO     | pgrp: 8393
[2026-01-09 10:34:21] 2026-01-09 15:33:26,881 | INFO     | corecount: 12
[2026-01-09 10:34:21] 2026-01-09 15:33:26,881 | INFO     | event service: False
[2026-01-09 10:34:21] 2026-01-09 15:33:26,881 | INFO     | sizes: {0: 2283857, 1: 2283999, 5: 2284261, 11: 2284317, 6174: 2311251, 6175: 2320249, 6179: 2320433, 6184: 2320627}
[2026-01-09 10:34:21] 2026-01-09 15:33:26,881 | INFO     | --------------------------------------------------
[2026-01-09 10:34:21] 2026-01-09 15:33:26,882 | INFO     | 
[2026-01-09 10:34:21] 2026-01-09 15:33:26,882 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 10:34:21] 2026-01-09 15:33:26,905 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 10:34:21] 2026-01-09 15:33:26,906 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 10:34:21] 2026-01-09 15:33:26,906 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 10:34:21] 2026-01-09 15:33:26,906 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 10:34:21] 2026-01-09 15:33:26,906 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 10:34:21] 2026-01-09 15:33:26,907 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 10:34:21] 2026-01-09 15:33:26,907 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 10:34:21] 2026-01-09 15:33:26,907 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 10:34:21] 2026-01-09 15:33:26,907 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 10:34:21] 2026-01-09 15:33:26,907 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 10:34:21] 2026-01-09 15:33:26,907 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 10:34:21] 2026-01-09 15:33:26,907 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 10:34:21] 2026-01-09 15:33:26,908 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 10:34:21] 2026-01-09 15:33:26,908 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 10:34:21] 2026-01-09 15:33:26,908 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 10:34:21] 2026-01-09 15:33:26,908 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 10:34:21] 2026-01-09 15:33:26,908 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 10:34:21] 2026-01-09 15:33:26,908 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 10:34:21] 2026-01-09 15:33:26,909 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 10:34:21] 2026-01-09 15:33:26,909 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 10:34:21] 2026-01-09 15:33:26,909 | INFO     | job 6963162715 has completed (purged errors)
[2026-01-09 10:34:21] 2026-01-09 15:33:26,909 | INFO     | overall cleanup function is called
[2026-01-09 10:34:21] 2026-01-09 15:33:27,547 | INFO     | PID=918 has CPU usage=7.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2026-01-09 10:34:21] 2026-01-09 15:33:27,917 | INFO     | --- collectZombieJob: --- 10, [8393]
[2026-01-09 10:34:21] 2026-01-09 15:33:27,918 | INFO     | zombie collector waiting for pid 8393
[2026-01-09 10:34:21] 2026-01-09 15:33:27,918 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 10:34:21] 2026-01-09 15:33:27,918 | INFO     | collected zombie processes
[2026-01-09 10:34:21] 2026-01-09 15:33:27,918 | INFO     | will attempt to kill all subprocesses of pid=8393
[2026-01-09 10:34:21] 2026-01-09 15:33:28,009 | INFO     | process IDs to be killed: [8393] (in reverse order)
[2026-01-09 10:34:21] 2026-01-09 15:33:28,089 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 10:34:21] 2026-01-09 15:33:28,090 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 10:34:21] 2026-01-09 15:33:28,093 | INFO     | did not find any defunct processes belonging to 8393
[2026-01-09 10:34:21] 2026-01-09 15:33:28,097 | INFO     | did not find any defunct processes belonging to 8393
[2026-01-09 10:34:21] 2026-01-09 15:33:28,097 | INFO     | ready for new job
[2026-01-09 10:34:21] 2026-01-09 15:33:28,097 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 10:34:21] 2026-01-09 15:33:28,098 | INFO     | ***************************************
[2026-01-09 10:34:21] 2026-01-09 15:33:28,098 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 10:34:21] 2026-01-09 15:33:28,099 | INFO     | ***************************************
[2026-01-09 10:34:21] 2026-01-09 15:33:28,099 | INFO     | 
[2026-01-09 10:34:21] 2026-01-09 15:33:28,099 | INFO     | architecture information:
[2026-01-09 10:34:21] 2026-01-09 15:33:28,100 | INFO     | executing command: cat /etc/os-release
[2026-01-09 10:34:21] 2026-01-09 15:33:28,115 | INFO     | cat /etc/os-release:
[2026-01-09 10:34:21] NAME="CentOS Linux"
[2026-01-09 10:34:21] VERSION="7 (Core)"
[2026-01-09 10:34:21] ID="centos"
[2026-01-09 10:34:21] ID_LIKE="rhel fedora"
[2026-01-09 10:34:21] VERSION_ID="7"
[2026-01-09 10:34:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 10:34:21] ANSI_COLOR="0;31"
[2026-01-09 10:34:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 10:34:21] HOME_URL="https://www.centos.org/"
[2026-01-09 10:34:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 10:34:21] 
[2026-01-09 10:34:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 10:34:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 10:34:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 10:34:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 10:34:21] 
[2026-01-09 10:34:21] 2026-01-09 15:33:28,115 | INFO     | ***************************************
[2026-01-09 10:34:21] 2026-01-09 15:33:28,618 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 10:34:21] 2026-01-09 15:33:28,634 | INFO     | sufficient remaining disk space (29427236864 B)
[2026-01-09 10:34:21] 2026-01-09 15:33:28,634 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 10:34:21] 2026-01-09 15:33:28,634 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 10:34:21] 2026-01-09 15:33:28,635 | INFO     | update_server=False
[2026-01-09 10:34:21] 2026-01-09 15:33:28,635 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 10:34:21] 2026-01-09 15:33:28,635 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 10:34:21] 2026-01-09 15:33:28,635 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 10:34:21] 2026-01-09 15:33:29,060 | INFO     | all data control threads have been joined
[2026-01-09 10:34:21] 2026-01-09 15:33:29,087 | INFO     | all payload control threads have been joined
[2026-01-09 10:34:21] 2026-01-09 15:33:29,454 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 10:34:21] 2026-01-09 15:33:29,454 | INFO     | aborting loop
[2026-01-09 10:34:21] 2026-01-09 15:33:29,494 | INFO     | all job control threads have been joined
[2026-01-09 10:34:21] 2026-01-09 15:33:29,640 | INFO     | [job] retrieve thread has finished
[2026-01-09 10:34:21] 2026-01-09 15:33:29,641 | INFO     | [job] queue monitor thread has finished
[2026-01-09 10:34:21] 2026-01-09 15:33:29,691 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 10:34:21] 2026-01-09 15:33:30,066 | INFO     | [data] control thread has finished
[2026-01-09 10:34:21] 2026-01-09 15:33:30,093 | INFO     | [payload] control thread has finished
[2026-01-09 10:34:21] 2026-01-09 15:33:30,148 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 10:34:21] 2026-01-09 15:33:30,224 | INFO     | [data] copytool_in thread has finished
[2026-01-09 10:34:21] 2026-01-09 15:33:30,460 | INFO     | [job] job monitor thread has finished
[2026-01-09 10:34:21] 2026-01-09 15:33:30,500 | INFO     | [job] control thread has finished
[2026-01-09 10:34:21] 2026-01-09 15:33:30,641 | INFO     | [data] copytool_out thread has finished
[2026-01-09 10:34:21] 2026-01-09 15:33:30,972 | INFO     | [payload] validate_post thread has finished
[2026-01-09 10:34:21] 2026-01-09 15:33:30,974 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 10:34:21] 2026-01-09 15:33:30,998 | INFO     | [job] validate thread has finished
[2026-01-09 10:34:21] 2026-01-09 15:33:31,154 | INFO     | [payload] failed_post thread has finished
[2026-01-09 10:34:21] 2026-01-09 15:33:31,927 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 10:34:21] 2026-01-09 15:33:35,931 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 10:34:21] 2026-01-09 15:33:39,386 | INFO     | job.realtimelogging is not enabled
[2026-01-09 10:34:21] 2026-01-09 15:33:40,390 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 10:34:21] 2026-01-09 15:33:59,727 | INFO     | PID=918 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2026-01-09 10:34:21] 2026-01-09 15:33:59,728 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 10:34:21] 2026-01-09 15:33:59,728 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 10:34:21] 2026-01-09 15:33:59,728 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 10:34:21] 2026-01-09 15:34:16,002 | INFO     | [monitor] cgroup control has ended
[2026-01-09 10:34:21] 2026-01-09 15:34:16,302 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139951963735872)>', '<ExcThread(monitor, started 139951660308224)>']
[2026-01-09 10:34:21] 2026-01-09 15:34:16,804 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 10:34:21] 2026-01-09 15:34:16,804 | INFO     | [monitor] control thread has ended
[2026-01-09 10:34:21] 2026-01-09 15:34:21,327 | INFO     | all workflow threads have been joined
[2026-01-09 10:34:21] 2026-01-09 15:34:21,336 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 10:34:21] 2026-01-09 15:34:21,337 | INFO     | traces error code: 0
[2026-01-09 10:34:21] 2026-01-09 15:34:21,337 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 10:34:21] 2026-01-09 15:34:21,424 [wrapper] ==== pilot stdout END ====
[2026-01-09 10:34:21] 2026-01-09 15:34:21,428 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 10:34:21] 2026-01-09 15:34:21,431 [wrapper] pilotpid: 918
[2026-01-09 10:34:21] 2026-01-09 15:34:21,435 [wrapper] Pilot exit status: 0
[2026-01-09 10:34:21] 2026-01-09 15:34:21,450 [wrapper] pandaids: 6963162715
[2026-01-09 10:34:21] 2026-01-09 15:34:21,498 [wrapper] cleanup supervisor_pilot 19028 919
[2026-01-09 10:34:21] 2026-01-09 15:34:21,502 [wrapper] Test setup, not cleaning
[2026-01-09 10:34:21] 2026-01-09 15:34:21,505 [wrapper] apfmon messages muted
[2026-01-09 10:34:21] 2026-01-09 15:34:21,509 [wrapper] ==== wrapper stdout END ====
[2026-01-09 10:34:21] 2026-01-09 15:34:21,513 [wrapper] ==== wrapper stderr END ====
[2026-01-09 10:34:21]  *** Error codes and diagnostics ***
[2026-01-09 10:34:21]     "exeErrorCode": 0,
[2026-01-09 10:34:21]     "exeErrorDiag": "",
[2026-01-09 10:34:21]     "pilotErrorCode": 0,
[2026-01-09 10:34:21]     "pilotErrorDiag": "",
[2026-01-09 10:34:21]  *** Listing of results directory ***
[2026-01-09 10:34:21] total 446720
[2026-01-09 10:34:21] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 19:55 pilot3.tar.gz
[2026-01-09 10:34:21] -rwx------ 1 boincer umatlas     36322 Jan  8 19:56 runpilot2-wrapper.sh
[2026-01-09 10:34:21] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 19:56 queuedata.json
[2026-01-09 10:34:21] -rw-r--r-- 1 boincer umatlas       100 Jan  9 08:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 10:34:21] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 08:49 run_atlas
[2026-01-09 10:34:21] -rw-r--r-- 1 boincer umatlas       105 Jan  9 08:49 job.xml
[2026-01-09 10:34:21] -rw-r--r-- 2 boincer umatlas 225168675 Jan  9 08:49 EVNT.47898824._001306.pool.root.1
[2026-01-09 10:34:21] drwxrwx--x 2 boincer umatlas      4096 Jan  9 08:49 shared
[2026-01-09 10:34:21] -rw-r--r-- 2 boincer umatlas    592394 Jan  9 08:49 input.tar.gz
[2026-01-09 10:34:21] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 08:49 start_atlas.sh
[2026-01-09 10:34:21] -rw-r--r-- 1 boincer umatlas         0 Jan  9 08:49 boinc_lockfile
[2026-01-09 10:34:21] -rw-r--r-- 1 boincer umatlas      2520 Jan  9 08:49 pandaJob.out
[2026-01-09 10:34:21] -rw------- 1 boincer umatlas        57 Jan  9 08:49 setup.sh.local
[2026-01-09 10:34:21] -rw------- 1 boincer umatlas    989377 Jan  9 08:50 agis_schedconf.cvmfs.json
[2026-01-09 10:34:21] -rw------- 1 boincer umatlas   1516240 Jan  9 08:50 agis_ddmendpoints.agis.ALL.json
[2026-01-09 10:34:21] drwx------ 5 boincer umatlas      4096 Jan  9 08:50 pilot3
[2026-01-09 10:34:21] -rw-r--r-- 1 boincer umatlas      5952 Jan  9 10:31 init_data.xml
[2026-01-09 10:34:21] -rw------- 1 boincer umatlas 225750041 Jan  9 10:32 HITS.47898826._034271.pool.root.1
[2026-01-09 10:34:21] -rw-r--r-- 1 boincer umatlas       529 Jan  9 10:32 boinc_task_state.xml
[2026-01-09 10:34:21] -rw------- 1 boincer umatlas      1045 Jan  9 10:33 memory_monitor_summary.json
[2026-01-09 10:34:21] -rw------- 1 boincer umatlas    422258 Jan  9 10:33 log.47898826._034271.job.log.tgz.1
[2026-01-09 10:34:21] -rw------- 1 boincer umatlas      7852 Jan  9 10:33 heartbeat.json
[2026-01-09 10:34:21] -rw-r--r-- 1 boincer umatlas        27 Jan  9 10:33 wrapper_checkpoint.txt
[2026-01-09 10:34:21] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 10:33 boinc_mmap_file
[2026-01-09 10:34:21] -rw------- 1 boincer umatlas        95 Jan  9 10:33 pilot_heartbeat.json
[2026-01-09 10:34:21] -rw------- 1 boincer umatlas      4816 Jan  9 10:34 pilotlog.txt
[2026-01-09 10:34:21] -rw------- 1 boincer umatlas    881739 Jan  9 10:34 log.47898826._034271.job.log.1
[2026-01-09 10:34:21] -rw------- 1 boincer umatlas       357 Jan  9 10:34 output.list
[2026-01-09 10:34:21] -rw-r--r-- 1 boincer umatlas       620 Jan  9 10:34 runtime_log
[2026-01-09 10:34:21] -rw------- 1 boincer umatlas   1320960 Jan  9 10:34 result.tar.gz
[2026-01-09 10:34:21] -rw-r--r-- 1 boincer umatlas      9339 Jan  9 10:34 runtime_log.err
[2026-01-09 10:34:21] -rw------- 1 boincer umatlas       659 Jan  9 10:34 a2nLDmqyFy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmHTgKDm9btjun.diag
[2026-01-09 10:34:21] -rw-r--r-- 1 boincer umatlas     21128 Jan  9 10:34 stderr.txt
[2026-01-09 10:34:21] HITS file was successfully produced:
[2026-01-09 10:34:21] -rw------- 1 boincer umatlas 225750041 Jan  9 10:32 shared/HITS.pool.root.1
[2026-01-09 10:34:21]  *** Contents of shared directory: ***
[2026-01-09 10:34:21] total 442244
[2026-01-09 10:34:21] -rw-r--r-- 2 boincer umatlas 225168675 Jan  9 08:49 ATLAS.root_0
[2026-01-09 10:34:21] -rw-r--r-- 2 boincer umatlas    592394 Jan  9 08:49 input.tar.gz
[2026-01-09 10:34:21] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 08:49 start_atlas.sh
[2026-01-09 10:34:21] -rw------- 1 boincer umatlas 225750041 Jan  9 10:32 HITS.pool.root.1
[2026-01-09 10:34:21] -rw------- 1 boincer umatlas   1320960 Jan  9 10:34 result.tar.gz
10:34:23 (29236): run_atlas exited; CPU time 66550.314002
10:34:23 (29236): called boinc_finish(0)

</stderr_txt>
]]>

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