Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:32:41 (10270): wrapper (7.7.26015): starting
19:32:41 (10270): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 19:32:41] Arguments: --nthreads 8
[2026-01-09 19:32:41] Threads: 8
[2026-01-09 19:32:41] Checking for CVMFS
[2026-01-09 19:32:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 19:32:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 19:32:41] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 19:32:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 19:32:41] 2.11.2.0 27806 35762 96584 154952 0 56 14041073 25165824 0 130560 0 18211184 99.823 10694957 3931 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 19:32:41] CVMFS is ok
[2026-01-09 19:32:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 19:32:41] Checking for apptainer binary...
[2026-01-09 19:32:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 19:32:41] Running /usr/bin/apptainer --version
[2026-01-09 19:32:41] apptainer version 1.3.2-1.el7
[2026-01-09 19:32:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 19:32:43] cg-vwn467.simple-grid.lan
[2026-01-09 19:32:43] apptainer works
[2026-01-09 19:32:43] Set ATHENA_PROC_NUMBER=8
[2026-01-09 19:32:43] Set ATHENA_CORE_NUMBER=8
[2026-01-09 19:32:43] Starting ATLAS job with PandaID=6963163209
[2026-01-09 19:32:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 21:59:19]  *** The last 200 lines of the pilot log: ***
[2026-01-09 21:59:19] 2026-01-09 20:58:16,916 | INFO     | time since job start (8717s) is within the limit (349056.0s)
[2026-01-09 21:59:19] 2026-01-09 20:58:18,066 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 21:59:19] 2026-01-09 20:58:18,067 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2250.0
[2026-01-09 21:59:19] 2026-01-09 20:58:18,069 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6963163209/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 21:59:19] 2026-01-09 20:58:18,070 | INFO     | extracted standard info from prmon json
[2026-01-09 21:59:19] 2026-01-09 20:58:18,070 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 21:59:19] 2026-01-09 20:58:18,070 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 21:59:19] 2026-01-09 20:58:18,070 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 21:59:19] 2026-01-09 20:58:18,070 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 21:59:19] 2026-01-09 20:58:18,074 | INFO     | fitting pss+swap vs Time
[2026-01-09 21:59:19] 2026-01-09 20:58:18,074 | INFO     | sum of square deviations: 906703512.0
[2026-01-09 21:59:19] 2026-01-09 20:58:18,075 | INFO     | sum of deviations: 13214380224.0
[2026-01-09 21:59:19] 2026-01-09 20:58:18,075 | INFO     | mean x: 1767987945.0
[2026-01-09 21:59:19] 2026-01-09 20:58:18,075 | INFO     | mean y: 2449196.72027972
[2026-01-09 21:59:19] 2026-01-09 20:58:18,076 | INFO     | intersect: -25764369424.225353
[2026-01-09 21:59:19] 2026-01-09 20:58:18,076 | INFO     | chi2: 2.182514977548527
[2026-01-09 21:59:19] 2026-01-09 20:58:18,076 | INFO     | sum of square deviations: 814878534.5
[2026-01-09 21:59:19] 2026-01-09 20:58:18,077 | INFO     | sum of deviations: 21934530120.999996
[2026-01-09 21:59:19] 2026-01-09 20:58:18,077 | INFO     | mean x: 1767987792.5
[2026-01-09 21:59:19] 2026-01-09 20:58:18,077 | INFO     | mean y: 2463236.5507246377
[2026-01-09 21:59:19] 2026-01-09 20:58:18,078 | INFO     | intersect: -47587428810.30075
[2026-01-09 21:59:19] 2026-01-09 20:58:18,078 | INFO     | chi2: 1.4121663780077338
[2026-01-09 21:59:19] 2026-01-09 20:58:18,078 | INFO     | current chi2=1.4121663780077338 (change=35.29637173010717 %)
[2026-01-09 21:59:19] 2026-01-09 20:58:18,078 | INFO     | sum of square deviations: 729472282.0
[2026-01-09 21:59:19] 2026-01-09 20:58:18,079 | INFO     | sum of deviations: 21075101853.0
[2026-01-09 21:59:19] 2026-01-09 20:58:18,079 | INFO     | mean x: 1767987640.0
[2026-01-09 21:59:19] 2026-01-09 20:58:18,079 | INFO     | mean y: 2461701.3082706765
[2026-01-09 21:59:19] 2026-01-09 20:58:18,080 | INFO     | intersect: -51076270838.99831
[2026-01-09 21:59:19] 2026-01-09 20:58:18,080 | INFO     | chi2: 1.4133554178193082
[2026-01-09 21:59:19] 2026-01-09 20:58:18,080 | INFO     | current chi2=1.4133554178193082 (change=-0.08419969701104542 %)
[2026-01-09 21:59:19] 2026-01-09 20:58:18,080 | INFO     | right removable region: 132
[2026-01-09 21:59:19] 2026-01-09 20:58:18,080 | INFO     | sum of square deviations: 814878534.5
[2026-01-09 21:59:19] 2026-01-09 20:58:18,081 | INFO     | sum of deviations: -6819640363.0
[2026-01-09 21:59:19] 2026-01-09 20:58:18,081 | INFO     | mean x: 1767988097.5
[2026-01-09 21:59:19] 2026-01-09 20:58:18,082 | INFO     | mean y: 2481883.15942029
[2026-01-09 21:59:19] 2026-01-09 20:58:18,082 | INFO     | intersect: 14798604839.585854
[2026-01-09 21:59:19] 2026-01-09 20:58:18,082 | INFO     | chi2: 0.8164316906916802
[2026-01-09 21:59:19] 2026-01-09 20:58:18,082 | INFO     | current chi2=0.8164316906916802 (change=62.59216092030107 %)
[2026-01-09 21:59:19] 2026-01-09 20:58:18,083 | INFO     | sum of square deviations: 729472282.0
[2026-01-09 21:59:19] 2026-01-09 20:58:18,083 | INFO     | sum of deviations: -5711924527.000001
[2026-01-09 21:59:19] 2026-01-09 20:58:18,084 | INFO     | mean x: 1767988250.0
[2026-01-09 21:59:19] 2026-01-09 20:58:18,084 | INFO     | mean y: 2479930.4511278197
[2026-01-09 21:59:19] 2026-01-09 20:58:18,084 | INFO     | intersect: 13846207372.617065
[2026-01-09 21:59:19] 2026-01-09 20:58:18,084 | INFO     | chi2: 0.8004119255287582
[2026-01-09 21:59:19] 2026-01-09 20:58:18,084 | INFO     | current chi2=0.8004119255287582 (change=1.962168463763343 %)
[2026-01-09 21:59:19] 2026-01-09 20:58:18,084 | INFO     | left removable region: 20
[2026-01-09 21:59:19] 2026-01-09 20:58:18,085 | INFO     | sum of square deviations: 435610028.0
[2026-01-09 21:59:19] 2026-01-09 20:58:18,085 | INFO     | sum of deviations: 1262826178.5
[2026-01-09 21:59:19] 2026-01-09 20:58:18,085 | INFO     | mean x: 1767988219.5
[2026-01-09 21:59:19] 2026-01-09 20:58:18,085 | INFO     | mean y: 2499666.3125
[2026-01-09 21:59:19] 2026-01-09 20:58:18,086 | INFO     | intersect: -5122868583.621829
[2026-01-09 21:59:19] 2026-01-09 20:58:18,086 | INFO     | chi2: 0.0003617557520588305
[2026-01-09 21:59:19] 2026-01-09 20:58:18,086 | INFO     | current memory leak: 2.90 B/s (using 112 data points, chi2=0.00)
[2026-01-09 21:59:19] 2026-01-09 20:58:18,087 | INFO     | could have reported an average CPU frequency of 2250 MHz (8 samples)
[2026-01-09 21:59:19] 2026-01-09 20:58:18,087 | INFO     | ..............................
[2026-01-09 21:59:19] 2026-01-09 20:58:18,087 | INFO     | . Timing measurements:
[2026-01-09 21:59:19] 2026-01-09 20:58:18,087 | INFO     | . get job = 0 s
[2026-01-09 21:59:19] 2026-01-09 20:58:18,087 | INFO     | . initial setup = 2 s
[2026-01-09 21:59:19] 2026-01-09 20:58:18,087 | INFO     | . payload setup = 8 s
[2026-01-09 21:59:19] 2026-01-09 20:58:18,087 | INFO     | . stage-in = 0 s
[2026-01-09 21:59:19] 2026-01-09 20:58:18,087 | INFO     | . payload execution = 8676 s
[2026-01-09 21:59:19] 2026-01-09 20:58:18,088 | INFO     | . stage-out = 1 s
[2026-01-09 21:59:19] 2026-01-09 20:58:18,088 | INFO     | . log creation = 0 s
[2026-01-09 21:59:19] 2026-01-09 20:58:18,088 | INFO     | ..............................
[2026-01-09 21:59:19] 2026-01-09 20:58:18,195 | INFO     | 
[2026-01-09 21:59:19] 2026-01-09 20:58:18,195 | INFO     | job summary report
[2026-01-09 21:59:19] 2026-01-09 20:58:18,195 | INFO     | --------------------------------------------------
[2026-01-09 21:59:19] 2026-01-09 20:58:18,195 | INFO     | PanDA job id: 6963163209
[2026-01-09 21:59:19] 2026-01-09 20:58:18,196 | INFO     | task id: 47898826
[2026-01-09 21:59:19] 2026-01-09 20:58:18,196 | INFO     | errors: (none)
[2026-01-09 21:59:19] 2026-01-09 20:58:18,196 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 21:59:19] 2026-01-09 20:58:18,196 | INFO     | pilot state: finished 
[2026-01-09 21:59:19] 2026-01-09 20:58:18,196 | INFO     | transexitcode: 0
[2026-01-09 21:59:19] 2026-01-09 20:58:18,196 | INFO     | exeerrorcode: 0
[2026-01-09 21:59:19] 2026-01-09 20:58:18,196 | INFO     | exeerrordiag: 
[2026-01-09 21:59:19] 2026-01-09 20:58:18,197 | INFO     | exitcode: 0
[2026-01-09 21:59:19] 2026-01-09 20:58:18,197 | INFO     | exitmsg: OK
[2026-01-09 21:59:19] 2026-01-09 20:58:18,197 | INFO     | cpuconsumptiontime: 65293 s
[2026-01-09 21:59:19] 2026-01-09 20:58:18,197 | INFO     | nevents: 400
[2026-01-09 21:59:19] 2026-01-09 20:58:18,197 | INFO     | neventsw: 0
[2026-01-09 21:59:19] 2026-01-09 20:58:18,197 | INFO     | pid: 20413
[2026-01-09 21:59:19] 2026-01-09 20:58:18,197 | INFO     | pgrp: 20413
[2026-01-09 21:59:19] 2026-01-09 20:58:18,197 | INFO     | corecount: 8
[2026-01-09 21:59:19] 2026-01-09 20:58:18,197 | INFO     | event service: False
[2026-01-09 21:59:19] 2026-01-09 20:58:18,197 | INFO     | sizes: {0: 2283971, 6: 2284233, 11: 2284261, 8688: 2311972, 8690: 2321026, 8701: 2321164}
[2026-01-09 21:59:19] 2026-01-09 20:58:18,198 | INFO     | --------------------------------------------------
[2026-01-09 21:59:19] 2026-01-09 20:58:18,198 | INFO     | 
[2026-01-09 21:59:19] 2026-01-09 20:58:18,198 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-01-09 21:59:19] 2026-01-09 20:58:18,235 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 21:59:19] 2026-01-09 20:58:18,235 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 21:59:19] 2026-01-09 20:58:18,235 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 21:59:19] 2026-01-09 20:58:18,235 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 21:59:19] 2026-01-09 20:58:18,235 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 21:59:19] 2026-01-09 20:58:18,235 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 21:59:19] 2026-01-09 20:58:18,235 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 21:59:19] 2026-01-09 20:58:18,236 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 21:59:19] 2026-01-09 20:58:18,236 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 21:59:19] 2026-01-09 20:58:18,236 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 21:59:19] 2026-01-09 20:58:18,236 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 21:59:19] 2026-01-09 20:58:18,236 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 21:59:19] 2026-01-09 20:58:18,236 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 21:59:19] 2026-01-09 20:58:18,236 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 21:59:19] 2026-01-09 20:58:18,236 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 21:59:19] 2026-01-09 20:58:18,236 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 21:59:19] 2026-01-09 20:58:18,236 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 21:59:19] 2026-01-09 20:58:18,237 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 21:59:19] 2026-01-09 20:58:18,237 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 21:59:19] 2026-01-09 20:58:18,237 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 21:59:19] 2026-01-09 20:58:18,237 | INFO     | job 6963163209 has completed (purged errors)
[2026-01-09 21:59:19] 2026-01-09 20:58:18,237 | INFO     | overall cleanup function is called
[2026-01-09 21:59:19] 2026-01-09 20:58:19,245 | INFO     | --- collectZombieJob: --- 10, [20413]
[2026-01-09 21:59:19] 2026-01-09 20:58:19,245 | INFO     | zombie collector waiting for pid 20413
[2026-01-09 21:59:19] 2026-01-09 20:58:19,246 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 21:59:19] 2026-01-09 20:58:19,246 | INFO     | collected zombie processes
[2026-01-09 21:59:19] 2026-01-09 20:58:19,246 | INFO     | will attempt to kill all subprocesses of pid=20413
[2026-01-09 21:59:19] 2026-01-09 20:58:19,303 | INFO     | process IDs to be killed: [20413] (in reverse order)
[2026-01-09 21:59:19] 2026-01-09 20:58:19,363 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 21:59:19] 2026-01-09 20:58:19,363 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 21:59:19] 2026-01-09 20:58:19,365 | INFO     | did not find any defunct processes belonging to 20413
[2026-01-09 21:59:19] 2026-01-09 20:58:19,367 | INFO     | did not find any defunct processes belonging to 20413
[2026-01-09 21:59:19] 2026-01-09 20:58:19,367 | INFO     | ready for new job
[2026-01-09 21:59:19] 2026-01-09 20:58:19,367 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 21:59:19] 2026-01-09 20:58:19,369 | INFO     | ***************************************
[2026-01-09 21:59:19] 2026-01-09 20:58:19,369 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 21:59:19] 2026-01-09 20:58:19,369 | INFO     | ***************************************
[2026-01-09 21:59:19] 2026-01-09 20:58:19,369 | INFO     | 
[2026-01-09 21:59:19] 2026-01-09 20:58:19,369 | INFO     | pilot is running in a VM
[2026-01-09 21:59:19] 2026-01-09 20:58:19,370 | INFO     | architecture information:
[2026-01-09 21:59:19] 2026-01-09 20:58:19,370 | INFO     | executing command: cat /etc/os-release
[2026-01-09 21:59:19] 2026-01-09 20:58:19,414 | INFO     | cat /etc/os-release:
[2026-01-09 21:59:19] NAME="CentOS Linux"
[2026-01-09 21:59:19] VERSION="7 (Core)"
[2026-01-09 21:59:19] ID="centos"
[2026-01-09 21:59:19] ID_LIKE="rhel fedora"
[2026-01-09 21:59:19] VERSION_ID="7"
[2026-01-09 21:59:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 21:59:19] ANSI_COLOR="0;31"
[2026-01-09 21:59:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 21:59:19] HOME_URL="https://www.centos.org/"
[2026-01-09 21:59:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 21:59:19] 
[2026-01-09 21:59:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 21:59:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 21:59:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 21:59:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 21:59:19] 
[2026-01-09 21:59:19] 2026-01-09 20:58:19,414 | INFO     | ***************************************
[2026-01-09 21:59:19] 2026-01-09 20:58:19,917 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-01-09 21:59:19] 2026-01-09 20:58:19,942 | INFO     | sufficient remaining disk space (497878564864 B)
[2026-01-09 21:59:19] 2026-01-09 20:58:19,942 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 21:59:19] 2026-01-09 20:58:19,942 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 21:59:19] 2026-01-09 20:58:19,942 | INFO     | update_server=False
[2026-01-09 21:59:19] 2026-01-09 20:58:19,943 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 21:59:19] 2026-01-09 20:58:19,943 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:59:19] 2026-01-09 20:58:19,943 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 21:59:19] 2026-01-09 20:58:19,959 | INFO     | all payload control threads have been joined
[2026-01-09 21:59:19] 2026-01-09 20:58:20,079 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:59:19] 2026-01-09 20:58:20,080 | INFO     | aborting loop
[2026-01-09 21:59:19] 2026-01-09 20:58:20,576 | INFO     | all job control threads have been joined
[2026-01-09 21:59:19] 2026-01-09 20:58:20,671 | INFO     | all data control threads have been joined
[2026-01-09 21:59:19] 2026-01-09 20:58:20,948 | INFO     | [job] retrieve thread has finished
[2026-01-09 21:59:19] 2026-01-09 20:58:20,949 | INFO     | [job] queue monitor thread has finished
[2026-01-09 21:59:19] 2026-01-09 20:58:20,965 | INFO     | [payload] control thread has finished
[2026-01-09 21:59:19] 2026-01-09 20:58:21,085 | INFO     | [job] job monitor thread has finished
[2026-01-09 21:59:19] 2026-01-09 20:58:21,192 | INFO     | [data] copytool_in thread has finished
[2026-01-09 21:59:19] 2026-01-09 20:58:21,427 | INFO     | [job] validate thread has finished
[2026-01-09 21:59:19] 2026-01-09 20:58:21,431 | INFO     | [payload] failed_post thread has finished
[2026-01-09 21:59:19] 2026-01-09 20:58:21,581 | INFO     | [job] control thread has finished
[2026-01-09 21:59:19] 2026-01-09 20:58:21,677 | INFO     | [data] control thread has finished
[2026-01-09 21:59:19] 2026-01-09 20:58:21,732 | INFO     | [payload] validate_post thread has finished
[2026-01-09 21:59:19] 2026-01-09 20:58:21,827 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 21:59:19] 2026-01-09 20:58:21,949 | INFO     | [data] copytool_out thread has finished
[2026-01-09 21:59:19] 2026-01-09 20:58:22,202 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 21:59:19] 2026-01-09 20:58:22,206 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 21:59:19] 2026-01-09 20:58:22,344 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 21:59:19] 2026-01-09 20:58:26,208 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 21:59:19] 2026-01-09 20:58:30,611 | INFO     | job.realtimelogging is not enabled
[2026-01-09 21:59:19] 2026-01-09 20:58:31,617 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 21:59:19] 2026-01-09 20:58:50,004 | INFO     | PID=13984 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 21:59:19] 2026-01-09 20:58:50,005 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 21:59:19] 2026-01-09 20:58:50,005 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 21:59:19] 2026-01-09 20:58:50,005 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 21:59:19] 2026-01-09 20:59:13,227 | INFO     | [monitor] cgroup control has ended
[2026-01-09 21:59:19] 2026-01-09 20:59:14,200 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140313518028608)>', '<ExcThread(monitor, started 140313075111680)>']
[2026-01-09 21:59:19] 2026-01-09 20:59:15,131 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 21:59:19] 2026-01-09 20:59:15,132 | INFO     | [monitor] control thread has ended
[2026-01-09 21:59:19] 2026-01-09 20:59:19,225 | INFO     | all workflow threads have been joined
[2026-01-09 21:59:19] 2026-01-09 20:59:19,226 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 21:59:19] 2026-01-09 20:59:19,226 | INFO     | traces error code: 0
[2026-01-09 21:59:19] 2026-01-09 20:59:19,226 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 21:59:19] 2026-01-09 20:59:19,365 [wrapper] ==== pilot stdout END ====
[2026-01-09 21:59:19] 2026-01-09 20:59:19,368 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 21:59:19] 2026-01-09 20:59:19,372 [wrapper] pilotpid: 13984
[2026-01-09 21:59:19] 2026-01-09 20:59:19,376 [wrapper] Pilot exit status: 0
[2026-01-09 21:59:19] 2026-01-09 20:59:19,397 [wrapper] pandaids: 6963163209
[2026-01-09 21:59:19] 2026-01-09 20:59:19,432 [wrapper] cleanup supervisor_pilot  4471 13985
[2026-01-09 21:59:19] 2026-01-09 20:59:19,437 [wrapper] Test setup, not cleaning
[2026-01-09 21:59:19] 2026-01-09 20:59:19,441 [wrapper] apfmon messages muted
[2026-01-09 21:59:19] 2026-01-09 20:59:19,444 [wrapper] ==== wrapper stdout END ====
[2026-01-09 21:59:19] 2026-01-09 20:59:19,447 [wrapper] ==== wrapper stderr END ====
[2026-01-09 21:59:19]  *** Error codes and diagnostics ***
[2026-01-09 21:59:19]     "exeErrorCode": 0,
[2026-01-09 21:59:19]     "exeErrorDiag": "",
[2026-01-09 21:59:19]     "pilotErrorCode": 0,
[2026-01-09 21:59:19]     "pilotErrorDiag": "",
[2026-01-09 21:59:19]  *** Listing of results directory ***
[2026-01-09 21:59:19] total 433832
[2026-01-09 21:59:19] -rwx------. 1 boinc boinc     36322 Jan  9 01:56 runpilot2-wrapper.sh
[2026-01-09 21:59:19] -rw-r--r--. 1 boinc boinc      5112 Jan  9 01:56 queuedata.json
[2026-01-09 21:59:19] -rw-r--r--. 1 boinc boinc    579449 Jan  9 01:57 pilot3.tar.gz
[2026-01-09 21:59:19] -rw-r--r--. 1 boinc boinc       100 Jan  9 19:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 21:59:19] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 19:32 run_atlas
[2026-01-09 21:59:19] -rw-r--r--. 1 boinc boinc       105 Jan  9 19:32 job.xml
[2026-01-09 21:59:19] -rw-r--r--. 2 boinc boinc 223159227 Jan  9 19:32 EVNT.47898824._001313.pool.root.1
[2026-01-09 21:59:19] drwxrwx--x. 2 boinc boinc        68 Jan  9 19:32 shared
[2026-01-09 21:59:19] -rw-r--r--. 2 boinc boinc    592393 Jan  9 19:32 input.tar.gz
[2026-01-09 21:59:19] -rw-r--r--. 1 boinc boinc      6390 Jan  9 19:32 init_data.xml
[2026-01-09 21:59:19] -rw-r--r--. 2 boinc boinc     15847 Jan  9 19:32 start_atlas.sh
[2026-01-09 21:59:19] -rw-r--r--. 1 boinc boinc         0 Jan  9 19:32 boinc_lockfile
[2026-01-09 21:59:19] -rw-r--r--. 1 boinc boinc      2520 Jan  9 19:32 pandaJob.out
[2026-01-09 21:59:19] -rw-------. 1 boinc boinc    989372 Jan  9 19:32 agis_schedconf.cvmfs.json
[2026-01-09 21:59:19] -rw-------. 1 boinc boinc   1516240 Jan  9 19:32 agis_ddmendpoints.agis.ALL.json
[2026-01-09 21:59:19] drwx------. 5 boinc boinc      4096 Jan  9 19:32 pilot3
[2026-01-09 21:59:19] -rw-------. 1 boinc boinc 214087831 Jan  9 21:57 HITS.47898826._034436.pool.root.1
[2026-01-09 21:59:19] -rw-r--r--. 1 boinc boinc       529 Jan  9 21:57 boinc_task_state.xml
[2026-01-09 21:59:19] -rw-------. 1 boinc boinc      1015 Jan  9 21:58 memory_monitor_summary.json
[2026-01-09 21:59:19] -rw-------. 1 boinc boinc    379573 Jan  9 21:58 log.47898826._034436.job.log.tgz.1
[2026-01-09 21:59:19] -rw-------. 1 boinc boinc      7777 Jan  9 21:58 heartbeat.json
[2026-01-09 21:59:19] -rw-------. 1 boinc boinc        95 Jan  9 21:58 pilot_heartbeat.json
[2026-01-09 21:59:19] -rw-r--r--. 1 boinc boinc      8192 Jan  9 21:59 boinc_mmap_file
[2026-01-09 21:59:19] -rw-r--r--. 1 boinc boinc        27 Jan  9 21:59 wrapper_checkpoint.txt
[2026-01-09 21:59:19] -rw-------. 1 boinc boinc      4881 Jan  9 21:59 pilotlog.txt
[2026-01-09 21:59:19] -rw-------. 1 boinc boinc   1171387 Jan  9 21:59 log.47898826._034436.job.log.1
[2026-01-09 21:59:19] -rw-------. 1 boinc boinc       357 Jan  9 21:59 output.list
[2026-01-09 21:59:19] -rw-r--r--. 1 boinc boinc       620 Jan  9 21:59 runtime_log
[2026-01-09 21:59:19] -rw-------. 1 boinc boinc   1566720 Jan  9 21:59 result.tar.gz
[2026-01-09 21:59:19] -rw-r--r--. 1 boinc boinc      8816 Jan  9 21:59 runtime_log.err
[2026-01-09 21:59:19] -rw-------. 1 boinc boinc       652 Jan  9 21:59 qqIODm0yFy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmcilKDmeBeZFn.diag
[2026-01-09 21:59:19] -rw-r--r--. 1 boinc boinc     20669 Jan  9 21:59 stderr.txt
[2026-01-09 21:59:19] HITS file was successfully produced:
[2026-01-09 21:59:19] -rw-------. 1 boinc boinc 214087831 Jan  9 21:57 shared/HITS.pool.root.1
[2026-01-09 21:59:19]  *** Contents of shared directory: ***
[2026-01-09 21:59:19] total 429132
[2026-01-09 21:59:19] -rw-r--r--. 2 boinc boinc 223159227 Jan  9 19:32 ATLAS.root_0
[2026-01-09 21:59:19] -rw-r--r--. 2 boinc boinc    592393 Jan  9 19:32 input.tar.gz
[2026-01-09 21:59:19] -rw-r--r--. 2 boinc boinc     15847 Jan  9 19:32 start_atlas.sh
[2026-01-09 21:59:19] -rw-------. 1 boinc boinc 214087831 Jan  9 21:57 HITS.pool.root.1
[2026-01-09 21:59:19] -rw-------. 1 boinc boinc   1566720 Jan  9 21:59 result.tar.gz
21:59:20 (10270): run_atlas exited; CPU time 65345.333552
21:59:20 (10270): called boinc_finish(0)

</stderr_txt>
]]>

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