Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:11:55 (2937818): wrapper (7.7.26015): starting
10:11:55 (2937818): wrapper: running run_atlas (--nthreads 3)
[2026-01-10 10:11:55] Arguments: --nthreads 3
[2026-01-10 10:11:55] Threads: 3
[2026-01-10 10:11:55] Checking for CVMFS
[2026-01-10 10:11:55] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 10:11:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 10:11:56] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 10:11:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 10:11:56] 2.9.2.0 2158329 3397 89176 154973 1 57 20676185 36864000 0 130560 0 2083951 99.988 124973 6784 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-10 10:11:56] CVMFS is ok
[2026-01-10 10:11:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 10:11:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 10:11:56] Further information can be found at the LHC@home message board.
[2026-01-10 10:11:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 10:11:56] Checking for apptainer binary...
[2026-01-10 10:11:56] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 10:11:56] Running /usr/bin/apptainer --version
[2026-01-10 10:11:56] apptainer version 1.4.1-1.1
[2026-01-10 10:11:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 10:11:56] thA327
[2026-01-10 10:11:56] apptainer works
[2026-01-10 10:11:56] Set ATHENA_PROC_NUMBER=3
[2026-01-10 10:11:56] Set ATHENA_CORE_NUMBER=3
[2026-01-10 10:11:56] Starting ATLAS job with PandaID=6963167175
[2026-01-10 10:11:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 12:05:16]  *** The last 200 lines of the pilot log: ***
[2026-01-10 12:05:16] 2026-01-10 11:04:46,118 | INFO     | executing command: cat /etc/os-release
[2026-01-10 12:05:16] 2026-01-10 11:04:46,126 | INFO     | cat /etc/os-release:
[2026-01-10 12:05:16] NAME="CentOS Linux"
[2026-01-10 12:05:16] VERSION="7 (Core)"
[2026-01-10 12:05:16] ID="centos"
[2026-01-10 12:05:16] ID_LIKE="rhel fedora"
[2026-01-10 12:05:16] VERSION_ID="7"
[2026-01-10 12:05:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 12:05:16] ANSI_COLOR="0;31"
[2026-01-10 12:05:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 12:05:16] HOME_URL="https://www.centos.org/"
[2026-01-10 12:05:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 12:05:16] 
[2026-01-10 12:05:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 12:05:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 12:05:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 12:05:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 12:05:16] 
[2026-01-10 12:05:16] 2026-01-10 11:04:46,127 | INFO     | ***************************************
[2026-01-10 12:05:16] 2026-01-10 11:04:46,630 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-10 12:05:16] 2026-01-10 11:04:46,641 | INFO     | sufficient remaining disk space (385707147264 B)
[2026-01-10 12:05:16] 2026-01-10 11:04:46,642 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 12:05:16] 2026-01-10 11:04:46,642 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 12:05:16] 2026-01-10 11:04:46,642 | INFO     | update_server=False
[2026-01-10 12:05:16] 2026-01-10 11:04:46,642 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 12:05:16] 2026-01-10 11:04:46,642 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 12:05:16] 2026-01-10 11:04:46,642 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 12:05:16] 2026-01-10 11:04:46,703 | INFO     | all data control threads have been joined
[2026-01-10 12:05:16] 2026-01-10 11:04:46,905 | INFO     | all job control threads have been joined
[2026-01-10 12:05:16] 2026-01-10 11:04:47,326 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 12:05:16] 2026-01-10 11:04:47,326 | INFO     | aborting loop
[2026-01-10 12:05:16] 2026-01-10 11:04:47,647 | INFO     | [job] retrieve thread has finished
[2026-01-10 12:05:16] 2026-01-10 11:04:47,647 | INFO     | [job] queue monitor thread has finished
[2026-01-10 12:05:16] 2026-01-10 11:04:47,709 | INFO     | [data] control thread has finished
[2026-01-10 12:05:16] 2026-01-10 11:04:47,762 | INFO     | all payload control threads have been joined
[2026-01-10 12:05:16] 2026-01-10 11:04:47,911 | INFO     | [job] control thread has finished
[2026-01-10 12:05:16] 2026-01-10 11:04:47,917 | INFO     | [payload] validate_post thread has finished
[2026-01-10 12:05:16] 2026-01-10 11:04:48,051 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 12:05:16] 2026-01-10 11:04:48,332 | INFO     | [job] job monitor thread has finished
[2026-01-10 12:05:16] 2026-01-10 11:04:48,547 | INFO     | [data] copytool_in thread has finished
[2026-01-10 12:05:16] 2026-01-10 11:04:48,648 | INFO     | [data] copytool_out thread has finished
[2026-01-10 12:05:16] 2026-01-10 11:04:48,672 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 12:05:16] 2026-01-10 11:04:48,768 | INFO     | [payload] control thread has finished
[2026-01-10 12:05:16] 2026-01-10 11:04:48,997 | INFO     | [payload] failed_post thread has finished
[2026-01-10 12:05:16] 2026-01-10 11:04:49,071 | INFO     | [job] validate thread has finished
[2026-01-10 12:05:16] 2026-01-10 11:04:49,126 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 12:05:16] 2026-01-10 11:04:49,133 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 12:05:16] 2026-01-10 11:04:52,679 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 12:05:16] 2026-01-10 11:04:57,124 | INFO     | job.realtimelogging is not enabled
[2026-01-10 12:05:16] 2026-01-10 11:04:58,130 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 12:05:16] 2026-01-10 11:05:09,408 | INFO     | [monitor] cgroup control has ended
[2026-01-10 12:05:16] 2026-01-10 11:05:10,461 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140294087014208)>', '<ExcThread(monitor, started 140293714188032)>']
[2026-01-10 12:05:16] 2026-01-10 11:05:15,486 | INFO     | all workflow threads have been joined
[2026-01-10 12:05:16] 2026-01-10 11:05:15,486 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 12:05:16] 2026-01-10 11:05:15,487 | INFO     | traces error code: 0
[2026-01-10 12:05:16] 2026-01-10 11:05:15,487 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 12:05:16] 2026-01-10 11:05:16,443 | INFO     | PID=2941547 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 12:05:16] 2026-01-10 11:05:16,444 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 12:05:16] 2026-01-10 11:05:16,444 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 12:05:16] 2026-01-10 11:05:16,444 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 12:05:16] 2026-01-10 11:05:16,444 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 12:05:16] 2026-01-10 11:05:16,444 | INFO     | [monitor] control thread has ended
[2026-01-10 12:05:16] 2026-01-10 11:05:16,489 [wrapper] ==== pilot stdout END ====
[2026-01-10 12:05:16] 2026-01-10 11:05:16,491 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 12:05:16] 2026-01-10 11:05:16,494 [wrapper] pilotpid: 2941547
[2026-01-10 12:05:16] 2026-01-10 11:05:16,496 [wrapper] Pilot exit status: 0
[2026-01-10 12:05:16] 2026-01-10 11:05:16,503 [wrapper] pandaids: 6963167175
[2026-01-10 12:05:16] 2026-01-10 11:05:16,519 [wrapper] cleanup supervisor_pilot 2962332 2941548
[2026-01-10 12:05:16] 2026-01-10 11:05:16,521 [wrapper] Test setup, not cleaning
[2026-01-10 12:05:16] 2026-01-10 11:05:16,523 [wrapper] apfmon messages muted
[2026-01-10 12:05:16] 2026-01-10 11:05:16,526 [wrapper] ==== wrapper stdout END ====
[2026-01-10 12:05:16] 2026-01-10 11:05:16,528 [wrapper] ==== wrapper stderr END ====
[2026-01-10 12:05:16]  *** Error codes and diagnostics ***
[2026-01-10 12:05:16]     "exeErrorCode": 0,
[2026-01-10 12:05:16]     "exeErrorDiag": "",
[2026-01-10 12:05:16]     "pilotErrorCode": 0,
[2026-01-10 12:05:16]     "pilotErrorDiag": "",
[2026-01-10 12:05:16]  *** Listing of results directory ***
[2026-01-10 12:05:16] total 437876
[2026-01-10 12:05:16] -rw-r--r-- 1 boinc boinc    579449 Jan  9 01:55 pilot3.tar.gz
[2026-01-10 12:05:16] -rwx------ 1 boinc boinc     36322 Jan  9 01:55 runpilot2-wrapper.sh
[2026-01-10 12:05:16] -rw-r--r-- 1 boinc boinc      5112 Jan  9 01:55 queuedata.json
[2026-01-10 12:05:16] -rw-r--r-- 1 boinc boinc       100 Jan 10 10:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 12:05:16] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 10:11 run_atlas
[2026-01-10 12:05:16] -rw-r--r-- 1 boinc boinc       105 Jan 10 10:11 job.xml
[2026-01-10 12:05:16] -rw-r--r-- 2 boinc boinc 222919912 Jan 10 10:11 EVNT.47898824._001378.pool.root.1
[2026-01-10 12:05:16] -rw-r--r-- 2 boinc boinc    592391 Jan 10 10:11 input.tar.gz
[2026-01-10 12:05:16] -rw-r--r-- 2 boinc boinc     15847 Jan 10 10:11 start_atlas.sh
[2026-01-10 12:05:16] drwxrwx--x 2 boinc boinc      4096 Jan 10 10:11 shared
[2026-01-10 12:05:16] -rw-r--r-- 1 boinc boinc         0 Jan 10 10:11 boinc_setup_complete
[2026-01-10 12:05:16] -rw-r--r-- 1 boinc boinc      6446 Jan 10 10:11 init_data.xml
[2026-01-10 12:05:16] -rw-r--r-- 1 boinc boinc         0 Jan 10 10:11 boinc_lockfile
[2026-01-10 12:05:16] -rw-r--r-- 1 boinc boinc      2519 Jan 10 10:11 pandaJob.out
[2026-01-10 12:05:16] -rw------- 1 boinc boinc    989548 Jan 10 10:12 agis_schedconf.cvmfs.json
[2026-01-10 12:05:16] -rw------- 1 boinc boinc   1516240 Jan 10 10:12 agis_ddmendpoints.agis.ALL.json
[2026-01-10 12:05:16] drwx------ 5 boinc boinc      4096 Jan 10 10:12 pilot3
[2026-01-10 12:05:16] -rw------- 1 boinc boinc 219083259 Jan 10 12:04 HITS.47898826._035550.pool.root.1
[2026-01-10 12:05:16] -rw-r--r-- 1 boinc boinc       529 Jan 10 12:04 boinc_task_state.xml
[2026-01-10 12:05:16] -rw------- 1 boinc boinc      1012 Jan 10 12:04 memory_monitor_summary.json
[2026-01-10 12:05:16] -rw------- 1 boinc boinc        95 Jan 10 12:04 pilot_heartbeat.json
[2026-01-10 12:05:16] -rw------- 1 boinc boinc    264643 Jan 10 12:04 log.47898826._035550.job.log.tgz.1
[2026-01-10 12:05:16] -rw------- 1 boinc boinc      7743 Jan 10 12:04 heartbeat.json
[2026-01-10 12:05:16] -rw-r--r-- 1 boinc boinc        27 Jan 10 12:05 wrapper_checkpoint.txt
[2026-01-10 12:05:16] -rw-r--r-- 1 boinc boinc      8192 Jan 10 12:05 boinc_mmap_file
[2026-01-10 12:05:16] -rw------- 1 boinc boinc       747 Jan 10 12:05 pilotlog.txt
[2026-01-10 12:05:16] -rw------- 1 boinc boinc    976052 Jan 10 12:05 log.47898826._035550.job.log.1
[2026-01-10 12:05:16] -rw------- 1 boinc boinc       357 Jan 10 12:05 output.list
[2026-01-10 12:05:16] -rw-r--r-- 1 boinc boinc       620 Jan 10 12:05 runtime_log
[2026-01-10 12:05:16] -rw------- 1 boinc boinc   1259520 Jan 10 12:05 result.tar.gz
[2026-01-10 12:05:16] -rw-r--r-- 1 boinc boinc      8897 Jan 10 12:05 runtime_log.err
[2026-01-10 12:05:16] -rw------- 1 boinc boinc       659 Jan 10 12:05 KPyNDmhxFy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm9hlKDmvzsYpn.diag
[2026-01-10 12:05:16] -rw-r--r-- 1 boinc boinc      8979 Jan 10 12:05 stderr.txt
[2026-01-10 12:05:16] HITS file was successfully produced:
[2026-01-10 12:05:16] -rw------- 1 boinc boinc 219083259 Jan 10 12:04 shared/HITS.pool.root.1
[2026-01-10 12:05:16]  *** Contents of shared directory: ***
[2026-01-10 12:05:16] total 433484
[2026-01-10 12:05:16] -rw-r--r-- 2 boinc boinc 222919912 Jan 10 10:11 ATLAS.root_0
[2026-01-10 12:05:16] -rw-r--r-- 2 boinc boinc    592391 Jan 10 10:11 input.tar.gz
[2026-01-10 12:05:16] -rw-r--r-- 2 boinc boinc     15847 Jan 10 10:11 start_atlas.sh
[2026-01-10 12:05:16] -rw------- 1 boinc boinc 219083259 Jan 10 12:04 HITS.pool.root.1
[2026-01-10 12:05:16] -rw------- 1 boinc boinc   1259520 Jan 10 12:05 result.tar.gz
12:05:18 (2937818): run_atlas exited; CPU time 19567.078142
12:05:18 (2937818): called boinc_finish(0)

</stderr_txt>
]]>

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