Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:22:16 (4159413): wrapper (7.7.26015): starting
10:22:16 (4159413): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 10:22:16] Arguments: --nthreads 8
[2026-01-09 10:22:16] Threads: 8
[2026-01-09 10:22:16] Checking for CVMFS
[2026-01-09 10:22:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 10:22:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 10:22:17] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 10:22:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 10:22:17] 2.13.3.0 5955 54242 404036 154948 2 64 19944903 32935936 12732 16776704 0 117546955 99.343 236574677 41459 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 10:22:17] CVMFS is ok
[2026-01-09 10:22:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 10:22:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 10:22:17] Further information can be found at the LHC@home message board.
[2026-01-09 10:22:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 10:22:17] Checking for apptainer binary...
[2026-01-09 10:22:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 10:22:17] Running /usr/bin/apptainer --version
[2026-01-09 10:22:17] apptainer version 1.4.5-2.el9
[2026-01-09 10:22:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 10:22:18] c6-1-24-4.aglt2.org
[2026-01-09 10:22:18] apptainer works
[2026-01-09 10:22:18] Set ATHENA_PROC_NUMBER=8
[2026-01-09 10:22:18] Set ATHENA_CORE_NUMBER=8
[2026-01-09 10:22:18] Starting ATLAS job with PandaID=6963167020
[2026-01-09 10:22:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 15:13:27]  *** The last 200 lines of the pilot log: ***
[2026-01-09 15:13:27] 2026-01-09 20:12:41,535 | INFO     | monitor loop #1092: job 0:6963167020 is in state 'finished'
[2026-01-09 15:13:27] 2026-01-09 20:12:41,535 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 15:13:27] 2026-01-09 20:12:41,913 | INFO     | time since job start (17391s) is within the limit (349056.0s)
[2026-01-09 15:13:27] 2026-01-09 20:12:43,920 | INFO     | time since job start (17393s) is within the limit (349056.0s)
[2026-01-09 15:13:27] 2026-01-09 20:12:44,040 | INFO     | monitor loop #1093: job 0:6963167020 is in state 'finished'
[2026-01-09 15:13:27] 2026-01-09 20:12:44,040 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 15:13:27] 2026-01-09 20:12:45,928 | INFO     | time since job start (17395s) is within the limit (349056.0s)
[2026-01-09 15:13:27] 2026-01-09 20:12:46,546 | INFO     | monitor loop #1094: job 0:6963167020 is in state 'finished'
[2026-01-09 15:13:27] 2026-01-09 20:12:46,546 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 15:13:27] 2026-01-09 20:12:47,735 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 15:13:27] 2026-01-09 20:12:47,740 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2940.164321428571
[2026-01-09 15:13:27] 2026-01-09 20:12:47,752 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963167020/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 15:13:27] 2026-01-09 20:12:47,753 | INFO     | extracted standard info from prmon json
[2026-01-09 15:13:27] 2026-01-09 20:12:47,753 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 15:13:27] 2026-01-09 20:12:47,753 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 15:13:27] 2026-01-09 20:12:47,754 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 15:13:27] 2026-01-09 20:12:47,754 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 15:13:27] 2026-01-09 20:12:47,760 | INFO     | fitting pss+swap vs Time
[2026-01-09 15:13:27] 2026-01-09 20:12:47,761 | INFO     | sum of square deviations: 7102781133.61971
[2026-01-09 15:13:27] 2026-01-09 20:12:47,764 | INFO     | sum of deviations: -71449382888.98589
[2026-01-09 15:13:27] 2026-01-09 20:12:47,764 | INFO     | mean x: 1767980874.9084506
[2026-01-09 15:13:27] 2026-01-09 20:12:47,764 | INFO     | mean y: 2586997.0774647887
[2026-01-09 15:13:27] 2026-01-09 20:12:47,764 | INFO     | intersect: 17787330760.87165
[2026-01-09 15:13:27] 2026-01-09 20:12:47,765 | INFO     | chi2: 1.9371663027125203
[2026-01-09 15:13:27] 2026-01-09 20:12:47,766 | INFO     | sum of square deviations: 6734198453.419391
[2026-01-09 15:13:27] 2026-01-09 20:12:47,768 | INFO     | sum of deviations: -69537083930.20424
[2026-01-09 15:13:27] 2026-01-09 20:12:47,768 | INFO     | mean x: 1767980722.4086022
[2026-01-09 15:13:27] 2026-01-09 20:12:47,768 | INFO     | mean y: 2587789.5017921147
[2026-01-09 15:13:27] 2026-01-09 20:12:47,769 | INFO     | intersect: 18258691278.505054
[2026-01-09 15:13:27] 2026-01-09 20:12:47,769 | INFO     | chi2: 1.9338640591621112
[2026-01-09 15:13:27] 2026-01-09 20:12:47,769 | INFO     | current chi2=1.9338640591621112 (change=0.17046773659985298 %)
[2026-01-09 15:13:27] 2026-01-09 20:12:47,769 | INFO     | right removable region: 278
[2026-01-09 15:13:27] 2026-01-09 20:12:47,770 | INFO     | sum of square deviations: 6734162097.770557
[2026-01-09 15:13:27] 2026-01-09 20:12:47,772 | INFO     | sum of deviations: -114039039847.45868
[2026-01-09 15:13:27] 2026-01-09 20:12:47,773 | INFO     | mean x: 1767981027.4157705
[2026-01-09 15:13:27] 2026-01-09 20:12:47,773 | INFO     | mean y: 2604471.831541219
[2026-01-09 15:13:27] 2026-01-09 20:12:47,773 | INFO     | intersect: 29942314254.25078
[2026-01-09 15:13:27] 2026-01-09 20:12:47,773 | INFO     | chi2: 0.5096249099170631
[2026-01-09 15:13:27] 2026-01-09 20:12:47,774 | INFO     | current chi2=0.5096249099170631 (change=73.69224783626166 %)
[2026-01-09 15:13:27] 2026-01-09 20:12:47,774 | INFO     | sum of square deviations: 6378520049.390532
[2026-01-09 15:13:27] 2026-01-09 20:12:47,776 | INFO     | sum of deviations: -110531749014.90508
[2026-01-09 15:13:27] 2026-01-09 20:12:47,777 | INFO     | mean x: 1767981179.9233577
[2026-01-09 15:13:27] 2026-01-09 20:12:47,777 | INFO     | mean y: 2602945.7664233577
[2026-01-09 15:13:27] 2026-01-09 20:12:47,777 | INFO     | intersect: 30639498421.392708
[2026-01-09 15:13:27] 2026-01-09 20:12:47,777 | INFO     | chi2: 0.4946529912148623
[2026-01-09 15:13:27] 2026-01-09 20:12:47,778 | INFO     | current chi2=0.4946529912148623 (change=2.9378310225529147 %)
[2026-01-09 15:13:27] 2026-01-09 20:12:47,778 | INFO     | left removable region: 20
[2026-01-09 15:13:27] 2026-01-09 20:12:47,778 | INFO     | sum of square deviations: 5325030831.00772
[2026-01-09 15:13:27] 2026-01-09 20:12:47,780 | INFO     | sum of deviations: -82356398703.88377
[2026-01-09 15:13:27] 2026-01-09 20:12:47,781 | INFO     | mean x: 1767981301.9379845
[2026-01-09 15:13:27] 2026-01-09 20:12:47,781 | INFO     | mean y: 2592391.069767442
[2026-01-09 15:13:27] 2026-01-09 20:12:47,781 | INFO     | intersect: 27346015861.138515
[2026-01-09 15:13:27] 2026-01-09 20:12:47,781 | INFO     | chi2: 0.44737598700809966
[2026-01-09 15:13:27] 2026-01-09 20:12:47,781 | INFO     | current memory leak: -15.47 B/s (using 258 data points, chi2=0.45)
[2026-01-09 15:13:27] 2026-01-09 20:12:47,782 | INFO     | could have reported an average CPU frequency of 3015 MHz (13 samples)
[2026-01-09 15:13:27] 2026-01-09 20:12:47,782 | INFO     | ..............................
[2026-01-09 15:13:27] 2026-01-09 20:12:47,782 | INFO     | . Timing measurements:
[2026-01-09 15:13:27] 2026-01-09 20:12:47,783 | INFO     | . get job = 0 s
[2026-01-09 15:13:27] 2026-01-09 20:12:47,783 | INFO     | . initial setup = 4 s
[2026-01-09 15:13:27] 2026-01-09 20:12:47,783 | INFO     | . payload setup = 22 s
[2026-01-09 15:13:27] 2026-01-09 20:12:47,783 | INFO     | . stage-in = 0 s
[2026-01-09 15:13:27] 2026-01-09 20:12:47,783 | INFO     | . payload execution = 17317 s
[2026-01-09 15:13:27] 2026-01-09 20:12:47,783 | INFO     | . stage-out = 3 s
[2026-01-09 15:13:27] 2026-01-09 20:12:47,783 | INFO     | . log creation = 0 s
[2026-01-09 15:13:27] 2026-01-09 20:12:47,783 | INFO     | ..............................
[2026-01-09 15:13:27] 2026-01-09 20:12:47,885 | INFO     | 
[2026-01-09 15:13:27] 2026-01-09 20:12:47,885 | INFO     | job summary report
[2026-01-09 15:13:27] 2026-01-09 20:12:47,885 | INFO     | --------------------------------------------------
[2026-01-09 15:13:27] 2026-01-09 20:12:47,885 | INFO     | PanDA job id: 6963167020
[2026-01-09 15:13:27] 2026-01-09 20:12:47,885 | INFO     | task id: 47898826
[2026-01-09 15:13:27] 2026-01-09 20:12:47,885 | INFO     | errors: (none)
[2026-01-09 15:13:27] 2026-01-09 20:12:47,885 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 15:13:27] 2026-01-09 20:12:47,885 | INFO     | pilot state: finished 
[2026-01-09 15:13:27] 2026-01-09 20:12:47,885 | INFO     | transexitcode: 0
[2026-01-09 15:13:27] 2026-01-09 20:12:47,886 | INFO     | exeerrorcode: 0
[2026-01-09 15:13:27] 2026-01-09 20:12:47,886 | INFO     | exeerrordiag: 
[2026-01-09 15:13:27] 2026-01-09 20:12:47,886 | INFO     | exitcode: 0
[2026-01-09 15:13:27] 2026-01-09 20:12:47,886 | INFO     | exitmsg: OK
[2026-01-09 15:13:27] 2026-01-09 20:12:47,886 | INFO     | cpuconsumptiontime: 56997 s
[2026-01-09 15:13:27] 2026-01-09 20:12:47,886 | INFO     | nevents: 400
[2026-01-09 15:13:27] 2026-01-09 20:12:47,886 | INFO     | neventsw: 0
[2026-01-09 15:13:27] 2026-01-09 20:12:47,886 | INFO     | pid: 4172015
[2026-01-09 15:13:27] 2026-01-09 20:12:47,886 | INFO     | pgrp: 4172015
[2026-01-09 15:13:27] 2026-01-09 20:12:47,886 | INFO     | corecount: 8
[2026-01-09 15:13:27] 2026-01-09 20:12:47,886 | INFO     | event service: False
[2026-01-09 15:13:27] 2026-01-09 20:12:47,886 | INFO     | sizes: {0: 2283742, 1: 2283826, 2: 2284025, 13: 2284025, 14: 2284343, 24: 2284371, 17343: 2316564, 17347: 2325618, 17361: 2325756}
[2026-01-09 15:13:27] 2026-01-09 20:12:47,886 | INFO     | --------------------------------------------------
[2026-01-09 15:13:27] 2026-01-09 20:12:47,886 | INFO     | 
[2026-01-09 15:13:27] 2026-01-09 20:12:47,887 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-09 15:13:27] 2026-01-09 20:12:47,906 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 15:13:27] 2026-01-09 20:12:47,906 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 15:13:27] 2026-01-09 20:12:47,906 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 15:13:27] 2026-01-09 20:12:47,906 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 15:13:27] 2026-01-09 20:12:47,906 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 15:13:27] 2026-01-09 20:12:47,906 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 15:13:27] 2026-01-09 20:12:47,906 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 15:13:27] 2026-01-09 20:12:47,907 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 15:13:27] 2026-01-09 20:12:47,907 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 15:13:27] 2026-01-09 20:12:47,907 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 15:13:27] 2026-01-09 20:12:47,907 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 15:13:27] 2026-01-09 20:12:47,907 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 15:13:27] 2026-01-09 20:12:47,907 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 15:13:27] 2026-01-09 20:12:47,907 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 15:13:27] 2026-01-09 20:12:47,907 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 15:13:27] 2026-01-09 20:12:47,907 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 15:13:27] 2026-01-09 20:12:47,907 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 15:13:27] 2026-01-09 20:12:47,907 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 15:13:27] 2026-01-09 20:12:47,907 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 15:13:27] 2026-01-09 20:12:47,907 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 15:13:27] 2026-01-09 20:12:47,908 | INFO     | job 6963167020 has completed (purged errors)
[2026-01-09 15:13:27] 2026-01-09 20:12:47,908 | INFO     | overall cleanup function is called
[2026-01-09 15:13:27] 2026-01-09 20:12:48,916 | INFO     | --- collectZombieJob: --- 10, [4172015]
[2026-01-09 15:13:27] 2026-01-09 20:12:48,917 | INFO     | zombie collector waiting for pid 4172015
[2026-01-09 15:13:27] 2026-01-09 20:12:48,917 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 15:13:27] 2026-01-09 20:12:48,917 | INFO     | collected zombie processes
[2026-01-09 15:13:27] 2026-01-09 20:12:48,917 | INFO     | will attempt to kill all subprocesses of pid=4172015
[2026-01-09 15:13:27] 2026-01-09 20:12:49,242 | INFO     | process IDs to be killed: [4172015] (in reverse order)
[2026-01-09 15:13:27] 2026-01-09 20:12:49,343 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 15:13:27] 2026-01-09 20:12:49,343 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 15:13:27] 2026-01-09 20:12:49,377 | INFO     | did not find any defunct processes belonging to 4172015
[2026-01-09 15:13:27] 2026-01-09 20:12:49,402 | INFO     | did not find any defunct processes belonging to 4172015
[2026-01-09 15:13:27] 2026-01-09 20:12:49,402 | INFO     | ready for new job
[2026-01-09 15:13:27] 2026-01-09 20:12:49,402 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 15:13:27] 2026-01-09 20:12:49,409 | INFO     | ***************************************
[2026-01-09 15:13:27] 2026-01-09 20:12:49,409 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 15:13:27] 2026-01-09 20:12:49,409 | INFO     | ***************************************
[2026-01-09 15:13:27] 2026-01-09 20:12:49,409 | INFO     | 
[2026-01-09 15:13:27] 2026-01-09 20:12:49,416 | INFO     | architecture information:
[2026-01-09 15:13:27] 2026-01-09 20:12:49,417 | INFO     | executing command: cat /etc/os-release
[2026-01-09 15:13:27] 2026-01-09 20:12:49,512 | INFO     | cat /etc/os-release:
[2026-01-09 15:13:27] NAME="CentOS Linux"
[2026-01-09 15:13:27] VERSION="7 (Core)"
[2026-01-09 15:13:27] ID="centos"
[2026-01-09 15:13:27] ID_LIKE="rhel fedora"
[2026-01-09 15:13:27] VERSION_ID="7"
[2026-01-09 15:13:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 15:13:27] ANSI_COLOR="0;31"
[2026-01-09 15:13:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 15:13:27] HOME_URL="https://www.centos.org/"
[2026-01-09 15:13:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 15:13:27] 
[2026-01-09 15:13:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 15:13:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 15:13:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 15:13:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 15:13:27] 
[2026-01-09 15:13:27] 2026-01-09 20:12:49,513 | INFO     | ***************************************
[2026-01-09 15:13:27] 2026-01-09 20:12:50,028 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-09 15:13:27] 2026-01-09 20:12:50,188 | INFO     | sufficient remaining disk space (74892443648 B)
[2026-01-09 15:13:27] 2026-01-09 20:12:50,188 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 15:13:27] 2026-01-09 20:12:50,192 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 15:13:27] 2026-01-09 20:12:50,192 | INFO     | update_server=False
[2026-01-09 15:13:27] 2026-01-09 20:12:50,193 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 15:13:27] 2026-01-09 20:12:50,193 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 15:13:27] 2026-01-09 20:12:50,193 | INFO     | aborting loop
[2026-01-09 15:13:27] 2026-01-09 20:12:50,193 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 15:13:27] 2026-01-09 20:12:50,681 | INFO     | all job control threads have been joined
[2026-01-09 15:13:27] 2026-01-09 20:12:51,198 | INFO     | [job] retrieve thread has finished
[2026-01-09 15:13:27] 2026-01-09 20:12:51,199 | INFO     | [job] job monitor thread has finished
[2026-01-09 15:13:27] 2026-01-09 20:12:51,226 | INFO     | all data control threads have been joined
[2026-01-09 15:13:27] 2026-01-09 20:12:51,518 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 15:13:27] 2026-01-09 20:12:51,564 | INFO     | [data] copytool_in thread has finished
[2026-01-09 15:13:27] 2026-01-09 20:12:51,633 | INFO     | all payload control threads have been joined
[2026-01-09 15:13:27] 2026-01-09 20:12:51,687 | INFO     | [job] control thread has finished
[2026-01-09 15:13:27] 2026-01-09 20:12:52,200 | INFO     | [data] copytool_out thread has finished
[2026-01-09 15:13:27] 2026-01-09 20:12:52,232 | INFO     | [data] control thread has finished
[2026-01-09 15:13:27] 2026-01-09 20:12:52,255 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 15:13:27] 2026-01-09 20:12:52,264 | INFO     | [payload] failed_post thread has finished
[2026-01-09 15:13:27] 2026-01-09 20:12:52,273 | INFO     | [payload] validate_post thread has finished
[2026-01-09 15:13:27] 2026-01-09 20:12:52,331 | INFO     | [job] validate thread has finished
[2026-01-09 15:13:27] 2026-01-09 20:12:52,338 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 15:13:27] 2026-01-09 20:12:52,632 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 15:13:27] 2026-01-09 20:12:52,639 | INFO     | [payload] control thread has finished
[2026-01-09 15:13:27] 2026-01-09 20:12:52,913 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 15:13:27] 2026-01-09 20:12:53,397 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 15:13:27] 2026-01-09 20:12:53,919 | INFO     | [job] queue monitor thread has finished
[2026-01-09 15:13:27] 2026-01-09 20:12:57,406 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 15:13:27] 2026-01-09 20:13:20,105 | INFO     | PID=4164332 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 15:13:27] 2026-01-09 20:13:20,106 | INFO     | .. there are 15 such processes running
[2026-01-09 15:13:27] 2026-01-09 20:13:20,106 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 15:13:27] 2026-01-09 20:13:20,107 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 15:13:27] 2026-01-09 20:13:20,107 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 15:13:27] 2026-01-09 20:13:20,308 | INFO     | [monitor] cgroup control has ended
[2026-01-09 15:13:27] 2026-01-09 20:13:21,347 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140375077848896)>', '<ExcThread(monitor, started 140374186108672)>']
[2026-01-09 15:13:27] 2026-01-09 20:13:22,118 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 15:13:27] 2026-01-09 20:13:22,118 | INFO     | [monitor] control thread has ended
[2026-01-09 15:13:27] 2026-01-09 20:13:26,373 | INFO     | all workflow threads have been joined
[2026-01-09 15:13:27] 2026-01-09 20:13:26,374 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 15:13:27] 2026-01-09 20:13:26,375 | INFO     | traces error code: 0
[2026-01-09 15:13:27] 2026-01-09 20:13:26,375 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 15:13:27] 2026-01-09 20:13:26,594 [wrapper] ==== pilot stdout END ====
[2026-01-09 15:13:27] 2026-01-09 20:13:26,613 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 15:13:27] 2026-01-09 20:13:26,665 [wrapper] pilotpid: 4164332
[2026-01-09 15:13:27] 2026-01-09 20:13:26,723 [wrapper] Pilot exit status: 0
[2026-01-09 15:13:27] 2026-01-09 20:13:26,905 [wrapper] pandaids: 6963167020
[2026-01-09 15:13:27] 2026-01-09 20:13:27,015 [wrapper] cleanup supervisor_pilot 1008818 4164333
[2026-01-09 15:13:27] 2026-01-09 20:13:27,029 [wrapper] Test setup, not cleaning
[2026-01-09 15:13:27] 2026-01-09 20:13:27,058 [wrapper] apfmon messages muted
[2026-01-09 15:13:27] 2026-01-09 20:13:27,111 [wrapper] ==== wrapper stdout END ====
[2026-01-09 15:13:27] 2026-01-09 20:13:27,143 [wrapper] ==== wrapper stderr END ====
[2026-01-09 15:13:27]  *** Error codes and diagnostics ***
[2026-01-09 15:13:27]     "exeErrorCode": 0,
[2026-01-09 15:13:27]     "exeErrorDiag": "",
[2026-01-09 15:13:27]     "pilotErrorCode": 0,
[2026-01-09 15:13:27]     "pilotErrorDiag": "",
[2026-01-09 15:13:27]  *** Listing of results directory ***
[2026-01-09 15:13:27] total 445636
[2026-01-09 15:13:27] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 19:55 pilot3.tar.gz
[2026-01-09 15:13:27] -rwx------. 1 boincer umatlas     36322 Jan  8 19:55 runpilot2-wrapper.sh
[2026-01-09 15:13:27] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 19:55 queuedata.json
[2026-01-09 15:13:27] -rw-r--r--. 1 boincer umatlas       100 Jan  9 10:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 15:13:27] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 10:22 run_atlas
[2026-01-09 15:13:27] -rw-r--r--. 1 boincer umatlas       105 Jan  9 10:22 job.xml
[2026-01-09 15:13:27] -rw-r--r--. 2 boincer umatlas 225625595 Jan  9 10:22 EVNT.47898824._001373.pool.root.1
[2026-01-09 15:13:27] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 10:22 start_atlas.sh
[2026-01-09 15:13:27] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 10:22 shared
[2026-01-09 15:13:27] -rw-r--r--. 2 boincer umatlas    592396 Jan  9 10:22 input.tar.gz
[2026-01-09 15:13:27] -rw-r--r--. 1 boincer umatlas         0 Jan  9 10:22 boinc_lockfile
[2026-01-09 15:13:27] -rw-r--r--. 1 boincer umatlas      2519 Jan  9 10:22 pandaJob.out
[2026-01-09 15:13:27] -rw-------. 1 boincer umatlas        57 Jan  9 10:22 setup.sh.local
[2026-01-09 15:13:27] -rw-------. 1 boincer umatlas    989377 Jan  9 10:22 agis_schedconf.cvmfs.json
[2026-01-09 15:13:27] drwx------. 5 boincer umatlas      4096 Jan  9 10:22 pilot3
[2026-01-09 15:13:27] -rw-r--r--. 1 boincer umatlas      6844 Jan  9 15:11 init_data.xml
[2026-01-09 15:13:27] -rw-r--r--. 1 boincer umatlas       530 Jan  9 15:11 boinc_task_state.xml
[2026-01-09 15:13:27] -rw-------. 1 boincer umatlas 221359527 Jan  9 15:11 HITS.47898826._035426.pool.root.1
[2026-01-09 15:13:27] -rw-------. 1 boincer umatlas      1043 Jan  9 15:12 memory_monitor_summary.json
[2026-01-09 15:13:27] -rw-------. 1 boincer umatlas   1516240 Jan  9 15:12 agis_ddmendpoints.agis.ALL.json
[2026-01-09 15:13:27] -rw-------. 1 boincer umatlas    481776 Jan  9 15:12 log.47898826._035426.job.log.tgz.1
[2026-01-09 15:13:27] -rw-------. 1 boincer umatlas      7822 Jan  9 15:12 heartbeat.json
[2026-01-09 15:13:27] -rw-------. 1 boincer umatlas        95 Jan  9 15:13 pilot_heartbeat.json
[2026-01-09 15:13:27] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 15:13 boinc_mmap_file
[2026-01-09 15:13:27] -rw-r--r--. 1 boincer umatlas        28 Jan  9 15:13 wrapper_checkpoint.txt
[2026-01-09 15:13:27] -rw-------. 1 boincer umatlas      4824 Jan  9 15:13 pilotlog.txt
[2026-01-09 15:13:27] -rw-------. 1 boincer umatlas   2235512 Jan  9 15:13 log.47898826._035426.job.log.1
[2026-01-09 15:13:27] -rw-------. 1 boincer umatlas       357 Jan  9 15:13 output.list
[2026-01-09 15:13:27] -rw-r--r--. 1 boincer umatlas       620 Jan  9 15:13 runtime_log
[2026-01-09 15:13:27] -rw-------. 1 boincer umatlas   2734080 Jan  9 15:13 result.tar.gz
[2026-01-09 15:13:27] -rw-r--r--. 1 boincer umatlas      9348 Jan  9 15:13 runtime_log.err
[2026-01-09 15:13:27] -rw-------. 1 boincer umatlas       657 Jan  9 15:13 B5qNDmhxFy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm4hlKDmLpd1Hn.diag
[2026-01-09 15:13:27] -rw-r--r--. 1 boincer umatlas     21184 Jan  9 15:13 stderr.txt
[2026-01-09 15:13:27] HITS file was successfully produced:
[2026-01-09 15:13:27] -rw-------. 1 boincer umatlas 221359527 Jan  9 15:11 shared/HITS.pool.root.1
[2026-01-09 15:13:27]  *** Contents of shared directory: ***
[2026-01-09 15:13:27] total 439784
[2026-01-09 15:13:27] -rw-r--r--. 2 boincer umatlas 225625595 Jan  9 10:22 ATLAS.root_0
[2026-01-09 15:13:27] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 10:22 start_atlas.sh
[2026-01-09 15:13:27] -rw-r--r--. 2 boincer umatlas    592396 Jan  9 10:22 input.tar.gz
[2026-01-09 15:13:27] -rw-------. 1 boincer umatlas 221359527 Jan  9 15:11 HITS.pool.root.1
[2026-01-09 15:13:27] -rw-------. 1 boincer umatlas   2734080 Jan  9 15:13 result.tar.gz
15:13:29 (4159413): run_atlas exited; CPU time 57539.750621
15:13:29 (4159413): called boinc_finish(0)

</stderr_txt>
]]>

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