Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:29:21 (483170): wrapper (7.7.26015): starting
09:29:21 (483170): wrapper: running run_atlas (--nthreads 9)
[2026-01-09 09:29:21] Arguments: --nthreads 9
[2026-01-09 09:29:21] Threads: 9
[2026-01-09 09:29:21] Checking for CVMFS
[2026-01-09 09:29:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 09:29:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 09:29:22] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 09:29:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 09:29:42] 2.13.3.0 12500 93531 201356 154946 0 174 30518188 32503808 14945 16776704 0 500232039 99.476 670626763 35382 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 09:29:42] CVMFS is ok
[2026-01-09 09:29:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 09:29:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 09:29:42] Further information can be found at the LHC@home message board.
[2026-01-09 09:29:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 09:29:42] Checking for apptainer binary...
[2026-01-09 09:29:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 09:29:42] Running /usr/bin/apptainer --version
[2026-01-09 09:29:42] apptainer version 1.4.5-2.el9
[2026-01-09 09:29:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 09:29:43] c7-7-36.aglt2.org
[2026-01-09 09:29:43] apptainer works
[2026-01-09 09:29:43] Set ATHENA_PROC_NUMBER=9
[2026-01-09 09:29:43] Set ATHENA_CORE_NUMBER=9
[2026-01-09 09:29:43] Starting ATLAS job with PandaID=6963162703
[2026-01-09 09:29:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 14:47:06]  *** The last 200 lines of the pilot log: ***
[2026-01-09 14:47:06] 2026-01-09 19:46:12,772 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 14:47:06] 2026-01-09 19:46:13,751 | INFO     | monitor loop #1217: job 0:6963162703 is in state 'finished'
[2026-01-09 14:47:06] 2026-01-09 19:46:13,752 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 14:47:06] 2026-01-09 19:46:14,606 | INFO     | time since job start (18947s) is within the limit (349056.0s)
[2026-01-09 14:47:06] 2026-01-09 19:46:16,254 | INFO     | monitor loop #1218: job 0:6963162703 is in state 'finished'
[2026-01-09 14:47:06] 2026-01-09 19:46:16,255 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 14:47:06] 2026-01-09 19:46:16,422 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 14:47:06] 2026-01-09 19:46:16,428 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3194.7108645833323
[2026-01-09 14:47:06] 2026-01-09 19:46:16,442 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6963162703/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 14:47:06] 2026-01-09 19:46:16,443 | INFO     | extracted standard info from prmon json
[2026-01-09 14:47:06] 2026-01-09 19:46:16,443 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 14:47:06] 2026-01-09 19:46:16,444 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 14:47:06] 2026-01-09 19:46:16,444 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 14:47:06] 2026-01-09 19:46:16,444 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 14:47:06] 2026-01-09 19:46:16,457 | INFO     | fitting pss+swap vs Time
[2026-01-09 14:47:06] 2026-01-09 19:46:16,458 | INFO     | sum of square deviations: 9237318408.077423
[2026-01-09 14:47:06] 2026-01-09 19:46:16,461 | INFO     | sum of deviations: 18826192409.451637
[2026-01-09 14:47:06] 2026-01-09 19:46:16,462 | INFO     | mean x: 1767978537.6322582
[2026-01-09 14:47:06] 2026-01-09 19:46:16,462 | INFO     | mean y: 2556362.35483871
[2026-01-09 14:47:06] 2026-01-09 19:46:16,462 | INFO     | intersect: -3600686771.0788755
[2026-01-09 14:47:06] 2026-01-09 19:46:16,462 | INFO     | chi2: 3.0543950435650973
[2026-01-09 14:47:06] 2026-01-09 19:46:16,463 | INFO     | sum of square deviations: 8797518015.488483
[2026-01-09 14:47:06] 2026-01-09 19:46:16,465 | INFO     | sum of deviations: 38277140339.68526
[2026-01-09 14:47:06] 2026-01-09 19:46:16,465 | INFO     | mean x: 1767978385.134426
[2026-01-09 14:47:06] 2026-01-09 19:46:16,465 | INFO     | mean y: 2563014.544262295
[2026-01-09 14:47:06] 2026-01-09 19:46:16,465 | INFO     | intersect: -7689738001.057918
[2026-01-09 14:47:06] 2026-01-09 19:46:16,466 | INFO     | chi2: 2.3533468854279507
[2026-01-09 14:47:06] 2026-01-09 19:46:16,466 | INFO     | current chi2=2.3533468854279507 (change=22.952111568347803 %)
[2026-01-09 14:47:06] 2026-01-09 19:46:16,466 | INFO     | right removable region: 304
[2026-01-09 14:47:06] 2026-01-09 19:46:16,466 | INFO     | sum of square deviations: 8797493005.488483
[2026-01-09 14:47:06] 2026-01-09 19:46:16,469 | INFO     | sum of deviations: -48792091603.28195
[2026-01-09 14:47:06] 2026-01-09 19:46:16,469 | INFO     | mean x: 1767978690.134426
[2026-01-09 14:47:06] 2026-01-09 19:46:16,469 | INFO     | mean y: 2579694.4459016393
[2026-01-09 14:47:06] 2026-01-09 19:46:16,469 | INFO     | intersect: 9808029741.166292
[2026-01-09 14:47:06] 2026-01-09 19:46:16,469 | INFO     | chi2: 0.9616553591711219
[2026-01-09 14:47:06] 2026-01-09 19:46:16,469 | INFO     | current chi2=0.9616553591711219 (change=68.51568492434838 %)
[2026-01-09 14:47:06] 2026-01-09 19:46:16,470 | INFO     | sum of square deviations: 8371872275.66666
[2026-01-09 14:47:06] 2026-01-09 19:46:16,472 | INFO     | sum of deviations: -55060955195.63336
[2026-01-09 14:47:06] 2026-01-09 19:46:16,472 | INFO     | mean x: 1767978842.6333334
[2026-01-09 14:47:06] 2026-01-09 19:46:16,472 | INFO     | mean y: 2581923.5033333334
[2026-01-09 14:47:06] 2026-01-09 19:46:16,472 | INFO     | intersect: 11630399529.369745
[2026-01-09 14:47:06] 2026-01-09 19:46:16,473 | INFO     | chi2: 0.927972927292783
[2026-01-09 14:47:06] 2026-01-09 19:46:16,473 | INFO     | current chi2=0.927972927292783 (change=3.502547098304605 %)
[2026-01-09 14:47:06] 2026-01-09 19:46:16,473 | INFO     | left removable region: 20
[2026-01-09 14:47:06] 2026-01-09 19:46:16,473 | INFO     | sum of square deviations: 7102480575.366166
[2026-01-09 14:47:06] 2026-01-09 19:46:16,475 | INFO     | sum of deviations: -7475084560.119722
[2026-01-09 14:47:06] 2026-01-09 19:46:16,475 | INFO     | mean x: 1767978964.640845
[2026-01-09 14:47:06] 2026-01-09 19:46:16,475 | INFO     | mean y: 2578388.665492958
[2026-01-09 14:47:06] 2026-01-09 19:46:16,476 | INFO     | intersect: 1863307484.7844074
[2026-01-09 14:47:06] 2026-01-09 19:46:16,476 | INFO     | chi2: 0.08593277600877113
[2026-01-09 14:47:06] 2026-01-09 19:46:16,476 | INFO     | current memory leak: -1.05 B/s (using 284 data points, chi2=0.09)
[2026-01-09 14:47:06] 2026-01-09 19:46:16,477 | INFO     | could have reported an average CPU frequency of 3182 MHz (14 samples)
[2026-01-09 14:47:06] 2026-01-09 19:46:16,477 | INFO     | ..............................
[2026-01-09 14:47:06] 2026-01-09 19:46:16,477 | INFO     | . Timing measurements:
[2026-01-09 14:47:06] 2026-01-09 19:46:16,477 | INFO     | . get job = 0 s
[2026-01-09 14:47:06] 2026-01-09 19:46:16,478 | INFO     | . initial setup = 9 s
[2026-01-09 14:47:06] 2026-01-09 19:46:16,478 | INFO     | . payload setup = 30 s
[2026-01-09 14:47:06] 2026-01-09 19:46:16,478 | INFO     | . stage-in = 0 s
[2026-01-09 14:47:06] 2026-01-09 19:46:16,478 | INFO     | . payload execution = 18864 s
[2026-01-09 14:47:06] 2026-01-09 19:46:16,478 | INFO     | . stage-out = 2 s
[2026-01-09 14:47:06] 2026-01-09 19:46:16,478 | INFO     | . log creation = 0 s
[2026-01-09 14:47:06] 2026-01-09 19:46:16,478 | INFO     | ..............................
[2026-01-09 14:47:06] 2026-01-09 19:46:16,584 | INFO     | 
[2026-01-09 14:47:06] 2026-01-09 19:46:16,585 | INFO     | job summary report
[2026-01-09 14:47:06] 2026-01-09 19:46:16,585 | INFO     | --------------------------------------------------
[2026-01-09 14:47:06] 2026-01-09 19:46:16,585 | INFO     | PanDA job id: 6963162703
[2026-01-09 14:47:06] 2026-01-09 19:46:16,585 | INFO     | task id: 47898826
[2026-01-09 14:47:06] 2026-01-09 19:46:16,585 | INFO     | errors: (none)
[2026-01-09 14:47:06] 2026-01-09 19:46:16,585 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 14:47:06] 2026-01-09 19:46:16,585 | INFO     | pilot state: finished 
[2026-01-09 14:47:06] 2026-01-09 19:46:16,585 | INFO     | transexitcode: 0
[2026-01-09 14:47:06] 2026-01-09 19:46:16,585 | INFO     | exeerrorcode: 0
[2026-01-09 14:47:06] 2026-01-09 19:46:16,585 | INFO     | exeerrordiag: 
[2026-01-09 14:47:06] 2026-01-09 19:46:16,585 | INFO     | exitcode: 0
[2026-01-09 14:47:06] 2026-01-09 19:46:16,585 | INFO     | exitmsg: OK
[2026-01-09 14:47:06] 2026-01-09 19:46:16,585 | INFO     | cpuconsumptiontime: 44419 s
[2026-01-09 14:47:06] 2026-01-09 19:46:16,586 | INFO     | nevents: 400
[2026-01-09 14:47:06] 2026-01-09 19:46:16,586 | INFO     | neventsw: 0
[2026-01-09 14:47:06] 2026-01-09 19:46:16,586 | INFO     | pid: 497722
[2026-01-09 14:47:06] 2026-01-09 19:46:16,586 | INFO     | pgrp: 497722
[2026-01-09 14:47:06] 2026-01-09 19:46:16,586 | INFO     | corecount: 9
[2026-01-09 14:47:06] 2026-01-09 19:46:16,586 | INFO     | event service: False
[2026-01-09 14:47:06] 2026-01-09 19:46:16,586 | INFO     | sizes: {0: 2283744, 1: 2283800, 2: 2284027, 3: 2284027, 13: 2284055, 21: 2284373, 24: 2284529, 18898: 2317558, 18901: 2326556, 18904: 2326612, 18909: 2326806}
[2026-01-09 14:47:06] 2026-01-09 19:46:16,586 | INFO     | --------------------------------------------------
[2026-01-09 14:47:06] 2026-01-09 19:46:16,586 | INFO     | 
[2026-01-09 14:47:06] 2026-01-09 19:46:16,586 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-09 14:47:06] 2026-01-09 19:46:16,609 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 14:47:06] 2026-01-09 19:46:16,609 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 14:47:06] 2026-01-09 19:46:16,610 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 14:47:06] 2026-01-09 19:46:16,610 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 14:47:06] 2026-01-09 19:46:16,610 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 14:47:06] 2026-01-09 19:46:16,610 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 14:47:06] 2026-01-09 19:46:16,610 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 14:47:06] 2026-01-09 19:46:16,610 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 14:47:06] 2026-01-09 19:46:16,610 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 14:47:06] 2026-01-09 19:46:16,610 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 14:47:06] 2026-01-09 19:46:16,610 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 14:47:06] 2026-01-09 19:46:16,610 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 14:47:06] 2026-01-09 19:46:16,610 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 14:47:06] 2026-01-09 19:46:16,610 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 14:47:06] 2026-01-09 19:46:16,611 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 14:47:06] 2026-01-09 19:46:16,611 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 14:47:06] 2026-01-09 19:46:16,611 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 14:47:06] 2026-01-09 19:46:16,611 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 14:47:06] 2026-01-09 19:46:16,611 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 14:47:06] 2026-01-09 19:46:16,611 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 14:47:06] 2026-01-09 19:46:16,611 | INFO     | job 6963162703 has completed (purged errors)
[2026-01-09 14:47:06] 2026-01-09 19:46:16,611 | INFO     | overall cleanup function is called
[2026-01-09 14:47:06] 2026-01-09 19:46:17,619 | INFO     | --- collectZombieJob: --- 10, [497722]
[2026-01-09 14:47:06] 2026-01-09 19:46:17,620 | INFO     | zombie collector waiting for pid 497722
[2026-01-09 14:47:06] 2026-01-09 19:46:17,620 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 14:47:06] 2026-01-09 19:46:17,620 | INFO     | collected zombie processes
[2026-01-09 14:47:06] 2026-01-09 19:46:17,620 | INFO     | will attempt to kill all subprocesses of pid=497722
[2026-01-09 14:47:06] 2026-01-09 19:46:18,009 | INFO     | process IDs to be killed: [497722] (in reverse order)
[2026-01-09 14:47:06] 2026-01-09 19:46:18,144 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 14:47:06] 2026-01-09 19:46:18,144 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 14:47:06] 2026-01-09 19:46:18,162 | INFO     | did not find any defunct processes belonging to 497722
[2026-01-09 14:47:06] 2026-01-09 19:46:18,179 | INFO     | did not find any defunct processes belonging to 497722
[2026-01-09 14:47:06] 2026-01-09 19:46:18,180 | INFO     | ready for new job
[2026-01-09 14:47:06] 2026-01-09 19:46:18,180 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 14:47:06] 2026-01-09 19:46:18,184 | INFO     | ***************************************
[2026-01-09 14:47:06] 2026-01-09 19:46:18,184 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 14:47:06] 2026-01-09 19:46:18,184 | INFO     | ***************************************
[2026-01-09 14:47:06] 2026-01-09 19:46:18,184 | INFO     | 
[2026-01-09 14:47:06] 2026-01-09 19:46:18,193 | INFO     | architecture information:
[2026-01-09 14:47:06] 2026-01-09 19:46:18,193 | INFO     | executing command: cat /etc/os-release
[2026-01-09 14:47:06] 2026-01-09 19:46:18,211 | INFO     | cat /etc/os-release:
[2026-01-09 14:47:06] NAME="CentOS Linux"
[2026-01-09 14:47:06] VERSION="7 (Core)"
[2026-01-09 14:47:06] ID="centos"
[2026-01-09 14:47:06] ID_LIKE="rhel fedora"
[2026-01-09 14:47:06] VERSION_ID="7"
[2026-01-09 14:47:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 14:47:06] ANSI_COLOR="0;31"
[2026-01-09 14:47:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 14:47:06] HOME_URL="https://www.centos.org/"
[2026-01-09 14:47:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 14:47:06] 
[2026-01-09 14:47:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 14:47:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 14:47:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 14:47:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 14:47:06] 
[2026-01-09 14:47:06] 2026-01-09 19:46:18,212 | INFO     | ***************************************
[2026-01-09 14:47:06] 2026-01-09 19:46:18,717 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-09 14:47:06] 2026-01-09 19:46:18,741 | INFO     | sufficient remaining disk space (94187290624 B)
[2026-01-09 14:47:06] 2026-01-09 19:46:18,741 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 14:47:06] 2026-01-09 19:46:18,741 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 14:47:06] 2026-01-09 19:46:18,741 | INFO     | update_server=False
[2026-01-09 14:47:06] 2026-01-09 19:46:18,741 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 14:47:06] 2026-01-09 19:46:18,742 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 14:47:06] 2026-01-09 19:46:18,758 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 14:47:06] 2026-01-09 19:46:18,759 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 14:47:06] 2026-01-09 19:46:18,759 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 14:47:06] 2026-01-09 19:46:18,759 | INFO     | will abort loop
[2026-01-09 14:47:06] 2026-01-09 19:46:18,915 | INFO     | all job control threads have been joined
[2026-01-09 14:47:06] 2026-01-09 19:46:19,339 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 14:47:06] 2026-01-09 19:46:19,600 | INFO     | all data control threads have been joined
[2026-01-09 14:47:06] 2026-01-09 19:46:19,747 | INFO     | [job] retrieve thread has finished
[2026-01-09 14:47:06] 2026-01-09 19:46:19,754 | INFO     | all payload control threads have been joined
[2026-01-09 14:47:06] 2026-01-09 19:46:19,763 | INFO     | [job] job monitor thread has finished
[2026-01-09 14:47:06] 2026-01-09 19:46:19,842 | INFO     | [payload] failed_post thread has finished
[2026-01-09 14:47:06] 2026-01-09 19:46:19,850 | INFO     | [data] copytool_in thread has finished
[2026-01-09 14:47:06] 2026-01-09 19:46:19,921 | INFO     | [job] control thread has finished
[2026-01-09 14:47:06] 2026-01-09 19:46:20,093 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 14:47:06] 2026-01-09 19:46:20,243 | INFO     | [job] validate thread has finished
[2026-01-09 14:47:06] 2026-01-09 19:46:20,463 | INFO     | [payload] validate_post thread has finished
[2026-01-09 14:47:06] 2026-01-09 19:46:20,607 | INFO     | [data] control thread has finished
[2026-01-09 14:47:06] 2026-01-09 19:46:20,693 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 14:47:06] 2026-01-09 19:46:20,760 | INFO     | [payload] control thread has finished
[2026-01-09 14:47:06] 2026-01-09 19:46:21,002 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 14:47:06] 2026-01-09 19:46:21,346 | INFO     | [data] copytool_out thread has finished
[2026-01-09 14:47:06] 2026-01-09 19:46:21,599 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 14:47:06] 2026-01-09 19:46:22,604 | INFO     | [job] queue monitor thread has finished
[2026-01-09 14:47:06] 2026-01-09 19:46:22,747 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 14:47:06] 2026-01-09 19:46:29,453 | INFO     | job.realtimelogging is not enabled
[2026-01-09 14:47:06] 2026-01-09 19:46:30,459 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 14:47:06] 2026-01-09 19:46:48,082 | INFO     | PID=488876 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 14:47:06] 2026-01-09 19:46:48,082 | INFO     | .. there are 16 such processes running
[2026-01-09 14:47:06] 2026-01-09 19:46:48,082 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 14:47:06] 2026-01-09 19:46:48,082 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 14:47:06] 2026-01-09 19:46:48,082 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 14:47:06] 2026-01-09 19:46:59,659 | INFO     | [monitor] cgroup control has ended
[2026-01-09 14:47:06] 2026-01-09 19:47:01,547 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140562088642368)>', '<ExcThread(monitor, started 140561411446528)>']
[2026-01-09 14:47:06] 2026-01-09 19:47:02,157 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 14:47:06] 2026-01-09 19:47:02,158 | INFO     | [monitor] control thread has ended
[2026-01-09 14:47:06] 2026-01-09 19:47:06,574 | INFO     | all workflow threads have been joined
[2026-01-09 14:47:06] 2026-01-09 19:47:06,577 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 14:47:06] 2026-01-09 19:47:06,577 | INFO     | traces error code: 0
[2026-01-09 14:47:06] 2026-01-09 19:47:06,577 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 14:47:06] 2026-01-09 19:47:06,764 [wrapper] ==== pilot stdout END ====
[2026-01-09 14:47:06] 2026-01-09 19:47:06,767 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 14:47:06] 2026-01-09 19:47:06,769 [wrapper] pilotpid: 488876
[2026-01-09 14:47:06] 2026-01-09 19:47:06,771 [wrapper] Pilot exit status: 0
[2026-01-09 14:47:06] 2026-01-09 19:47:06,781 [wrapper] pandaids: 6963162703
[2026-01-09 14:47:06] 2026-01-09 19:47:06,862 [wrapper] cleanup supervisor_pilot 1293051 488877
[2026-01-09 14:47:06] 2026-01-09 19:47:06,866 [wrapper] Test setup, not cleaning
[2026-01-09 14:47:06] 2026-01-09 19:47:06,869 [wrapper] apfmon messages muted
[2026-01-09 14:47:06] 2026-01-09 19:47:06,871 [wrapper] ==== wrapper stdout END ====
[2026-01-09 14:47:06] 2026-01-09 19:47:06,873 [wrapper] ==== wrapper stderr END ====
[2026-01-09 14:47:06]  *** Error codes and diagnostics ***
[2026-01-09 14:47:06]     "exeErrorCode": 0,
[2026-01-09 14:47:06]     "exeErrorDiag": "",
[2026-01-09 14:47:06]     "pilotErrorCode": 0,
[2026-01-09 14:47:06]     "pilotErrorDiag": "",
[2026-01-09 14:47:06]  *** Listing of results directory ***
[2026-01-09 14:47:06] total 439880
[2026-01-09 14:47:06] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 19:55 pilot3.tar.gz
[2026-01-09 14:47:06] -rwx------. 1 boincer umatlas     36322 Jan  8 19:56 runpilot2-wrapper.sh
[2026-01-09 14:47:06] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 19:56 queuedata.json
[2026-01-09 14:47:06] -rw-r--r--. 1 boincer umatlas       100 Jan  9 09:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 14:47:06] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 09:29 run_atlas
[2026-01-09 14:47:06] -rw-r--r--. 1 boincer umatlas       105 Jan  9 09:29 job.xml
[2026-01-09 14:47:06] -rw-r--r--. 2 boincer umatlas 225168675 Jan  9 09:29 EVNT.47898824._001306.pool.root.1
[2026-01-09 14:47:06] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 09:29 start_atlas.sh
[2026-01-09 14:47:06] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 09:29 shared
[2026-01-09 14:47:06] -rw-r--r--. 2 boincer umatlas    592389 Jan  9 09:29 input.tar.gz
[2026-01-09 14:47:06] -rw-r--r--. 1 boincer umatlas         0 Jan  9 09:29 boinc_lockfile
[2026-01-09 14:47:06] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 09:29 pandaJob.out
[2026-01-09 14:47:06] -rw-------. 1 boincer umatlas        57 Jan  9 09:29 setup.sh.local
[2026-01-09 14:47:06] -rw-------. 1 boincer umatlas    989377 Jan  9 09:30 agis_schedconf.cvmfs.json
[2026-01-09 14:47:06] drwx------. 5 boincer umatlas      4096 Jan  9 09:30 pilot3
[2026-01-09 14:47:06] -rw-r--r--. 1 boincer umatlas      6946 Jan  9 14:36 init_data.xml
[2026-01-09 14:47:06] -rw-------. 1 boincer umatlas 215366760 Jan  9 14:45 HITS.47898826._034259.pool.root.1
[2026-01-09 14:47:06] -rw-r--r--. 1 boincer umatlas       530 Jan  9 14:45 boinc_task_state.xml
[2026-01-09 14:47:06] -rw-------. 1 boincer umatlas      1033 Jan  9 14:46 memory_monitor_summary.json
[2026-01-09 14:47:06] -rw-------. 1 boincer umatlas        95 Jan  9 14:46 pilot_heartbeat.json
[2026-01-09 14:47:06] -rw-------. 1 boincer umatlas   1516240 Jan  9 14:46 agis_ddmendpoints.agis.ALL.json
[2026-01-09 14:47:06] -rw-------. 1 boincer umatlas    528933 Jan  9 14:46 log.47898826._034259.job.log.tgz.1
[2026-01-09 14:47:06] -rw-------. 1 boincer umatlas      7774 Jan  9 14:46 heartbeat.json
[2026-01-09 14:47:06] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 14:47 boinc_mmap_file
[2026-01-09 14:47:06] -rw-r--r--. 1 boincer umatlas        28 Jan  9 14:47 wrapper_checkpoint.txt
[2026-01-09 14:47:06] -rw-------. 1 boincer umatlas      5081 Jan  9 14:47 pilotlog.txt
[2026-01-09 14:47:06] -rw-------. 1 boincer umatlas   2464910 Jan  9 14:47 log.47898826._034259.job.log.1
[2026-01-09 14:47:06] -rw-------. 1 boincer umatlas       357 Jan  9 14:47 output.list
[2026-01-09 14:47:06] -rw-r--r--. 1 boincer umatlas       620 Jan  9 14:47 runtime_log
[2026-01-09 14:47:06] -rw-------. 1 boincer umatlas   3010560 Jan  9 14:47 result.tar.gz
[2026-01-09 14:47:06] -rw-r--r--. 1 boincer umatlas      9338 Jan  9 14:47 runtime_log.err
[2026-01-09 14:47:06] -rw-------. 1 boincer umatlas       655 Jan  9 14:47 PiXLDmqyFy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmBTgKDmBuWm0n.diag
[2026-01-09 14:47:06] -rw-r--r--. 1 boincer umatlas     21484 Jan  9 14:47 stderr.txt
[2026-01-09 14:47:06] HITS file was successfully produced:
[2026-01-09 14:47:06] -rw-------. 1 boincer umatlas 215366760 Jan  9 14:45 shared/HITS.pool.root.1
[2026-01-09 14:47:06]  *** Contents of shared directory: ***
[2026-01-09 14:47:06] total 433756
[2026-01-09 14:47:06] -rw-r--r--. 2 boincer umatlas 225168675 Jan  9 09:29 ATLAS.root_0
[2026-01-09 14:47:06] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 09:29 start_atlas.sh
[2026-01-09 14:47:06] -rw-r--r--. 2 boincer umatlas    592389 Jan  9 09:29 input.tar.gz
[2026-01-09 14:47:06] -rw-------. 1 boincer umatlas 215366760 Jan  9 14:45 HITS.pool.root.1
[2026-01-09 14:47:06] -rw-------. 1 boincer umatlas   3010560 Jan  9 14:47 result.tar.gz
14:47:08 (483170): run_atlas exited; CPU time 45077.199847
14:47:08 (483170): called boinc_finish(0)

</stderr_txt>
]]>

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