Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:20:55 (12305): wrapper (7.7.26015): starting
17:20:55 (12305): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 17:20:55] Arguments: --nthreads 8
[2026-01-09 17:20:55] Threads: 8
[2026-01-09 17:20:55] Checking for CVMFS
[2026-01-09 17:20:55] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 17:20:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 17:20:56] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 17:20:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 17:20:56] 2.11.2.0 30928 35630 119452 154950 1 56 21869016 25165824 0 130560 0 17156882 99.803 13717613 3002 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 17:20:56] CVMFS is ok
[2026-01-09 17:20:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 17:20:56] Checking for apptainer binary...
[2026-01-09 17:20:56] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 17:20:56] Running /usr/bin/apptainer --version
[2026-01-09 17:20:56] apptainer version 1.3.2-1.el7
[2026-01-09 17:20:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 17:20:57] cg-vwn464.simple-grid.lan
[2026-01-09 17:20:57] apptainer works
[2026-01-09 17:20:57] Set ATHENA_PROC_NUMBER=8
[2026-01-09 17:20:57] Set ATHENA_CORE_NUMBER=8
[2026-01-09 17:20:57] Starting ATLAS job with PandaID=6963165653
[2026-01-09 17:20:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/18 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 19:55:35]  *** The last 200 lines of the pilot log: ***
[2026-01-09 19:55:35] 2026-01-09 18:54:54,397 | INFO     | fitting pss+swap vs Time
[2026-01-09 19:55:35] 2026-01-09 18:54:54,397 | INFO     | sum of square deviations: 1067554900.0
[2026-01-09 19:55:35] 2026-01-09 18:54:54,398 | INFO     | sum of deviations: -21804914027.0
[2026-01-09 19:55:35] 2026-01-09 18:54:54,399 | INFO     | mean x: 1767980284.0
[2026-01-09 19:55:35] 2026-01-09 18:54:54,399 | INFO     | mean y: 2547598.622516556
[2026-01-09 19:55:35] 2026-01-09 18:54:54,399 | INFO     | intersect: 36113719112.19155
[2026-01-09 19:55:35] 2026-01-09 18:54:54,399 | INFO     | chi2: 2.460424638964333
[2026-01-09 19:55:35] 2026-01-09 18:54:54,399 | INFO     | sum of square deviations: 964976232.5
[2026-01-09 19:55:35] 2026-01-09 18:54:54,400 | INFO     | sum of deviations: -10550581075.500004
[2026-01-09 19:55:35] 2026-01-09 18:54:54,400 | INFO     | mean x: 1767980131.5
[2026-01-09 19:55:35] 2026-01-09 18:54:54,401 | INFO     | mean y: 2563933.212328767
[2026-01-09 19:55:35] 2026-01-09 18:54:54,401 | INFO     | intersect: 19332799320.397274
[2026-01-09 19:55:35] 2026-01-09 18:54:54,401 | INFO     | chi2: 1.7001620922453118
[2026-01-09 19:55:35] 2026-01-09 18:54:54,401 | INFO     | current chi2=1.7001620922453118 (change=30.899647755073644 %)
[2026-01-09 19:55:35] 2026-01-09 18:54:54,401 | INFO     | sum of square deviations: 869188390.0
[2026-01-09 19:55:35] 2026-01-09 18:54:54,402 | INFO     | sum of deviations: -9450410177.000006
[2026-01-09 19:55:35] 2026-01-09 18:54:54,402 | INFO     | mean x: 1767979979.0
[2026-01-09 19:55:35] 2026-01-09 18:54:54,402 | INFO     | mean y: 2565685.496453901
[2026-01-09 19:55:35] 2026-01-09 18:54:54,403 | INFO     | intersect: 19225252249.768044
[2026-01-09 19:55:35] 2026-01-09 18:54:54,403 | INFO     | chi2: 1.7003614424355098
[2026-01-09 19:55:35] 2026-01-09 18:54:54,403 | INFO     | current chi2=1.7003614424355098 (change=-0.01172536378191682 %)
[2026-01-09 19:55:35] 2026-01-09 18:54:54,403 | INFO     | right removable region: 140
[2026-01-09 19:55:35] 2026-01-09 18:54:54,403 | INFO     | sum of square deviations: 964976232.5
[2026-01-09 19:55:35] 2026-01-09 18:54:54,404 | INFO     | sum of deviations: -45295836334.00001
[2026-01-09 19:55:35] 2026-01-09 18:54:54,405 | INFO     | mean x: 1767980436.5
[2026-01-09 19:55:35] 2026-01-09 18:54:54,405 | INFO     | mean y: 2581997.4657534244
[2026-01-09 19:55:35] 2026-01-09 18:54:54,405 | INFO     | intersect: 82991312492.87503
[2026-01-09 19:55:35] 2026-01-09 18:54:54,405 | INFO     | chi2: 0.9431246018188078
[2026-01-09 19:55:35] 2026-01-09 18:54:54,406 | INFO     | current chi2=0.9431246018188078 (change=61.66821828707595 %)
[2026-01-09 19:55:35] 2026-01-09 18:54:54,406 | INFO     | sum of square deviations: 869188390.0
[2026-01-09 19:55:35] 2026-01-09 18:54:54,407 | INFO     | sum of deviations: -43939372441.0
[2026-01-09 19:55:35] 2026-01-09 18:54:54,407 | INFO     | mean x: 1767980589.0
[2026-01-09 19:55:35] 2026-01-09 18:54:54,407 | INFO     | mean y: 2579764.0425531915
[2026-01-09 19:55:35] 2026-01-09 18:54:54,407 | INFO     | intersect: 89377861880.41959
[2026-01-09 19:55:35] 2026-01-09 18:54:54,407 | INFO     | chi2: 0.9255951435778255
[2026-01-09 19:55:35] 2026-01-09 18:54:54,408 | INFO     | current chi2=0.9255951435778255 (change=1.8586577221267344 %)
[2026-01-09 19:55:35] 2026-01-09 18:54:54,408 | INFO     | left removable region: 20
[2026-01-09 19:55:35] 2026-01-09 18:54:54,408 | INFO     | sum of square deviations: 535786790.0
[2026-01-09 19:55:35] 2026-01-09 18:54:54,409 | INFO     | sum of deviations: -23924728168.5
[2026-01-09 19:55:35] 2026-01-09 18:54:54,409 | INFO     | mean x: 1767980558.5
[2026-01-09 19:55:35] 2026-01-09 18:54:54,409 | INFO     | mean y: 2588210.375
[2026-01-09 19:55:35] 2026-01-09 18:54:54,409 | INFO     | intersect: 78949018131.32417
[2026-01-09 19:55:35] 2026-01-09 18:54:54,409 | INFO     | chi2: 0.12021752020667817
[2026-01-09 19:55:35] 2026-01-09 18:54:54,410 | INFO     | current memory leak: -44.65 B/s (using 120 data points, chi2=0.12)
[2026-01-09 19:55:35] 2026-01-09 18:54:54,410 | INFO     | could have reported an average CPU frequency of 2250 MHz (8 samples)
[2026-01-09 19:55:35] 2026-01-09 18:54:54,410 | INFO     | ..............................
[2026-01-09 19:55:35] 2026-01-09 18:54:54,410 | INFO     | . Timing measurements:
[2026-01-09 19:55:35] 2026-01-09 18:54:54,410 | INFO     | . get job = 0 s
[2026-01-09 19:55:35] 2026-01-09 18:54:54,411 | INFO     | . initial setup = 2 s
[2026-01-09 19:55:35] 2026-01-09 18:54:54,411 | INFO     | . payload setup = 8 s
[2026-01-09 19:55:35] 2026-01-09 18:54:54,411 | INFO     | . stage-in = 0 s
[2026-01-09 19:55:35] 2026-01-09 18:54:54,411 | INFO     | . payload execution = 9183 s
[2026-01-09 19:55:35] 2026-01-09 18:54:54,411 | INFO     | . stage-out = 1 s
[2026-01-09 19:55:35] 2026-01-09 18:54:54,411 | INFO     | . log creation = 0 s
[2026-01-09 19:55:35] 2026-01-09 18:54:54,411 | INFO     | ..............................
[2026-01-09 19:55:35] 2026-01-09 18:54:54,428 | INFO     | sufficient remaining disk space (498100862976 B)
[2026-01-09 19:55:35] 2026-01-09 18:54:54,428 | INFO     | work directory size check will use 4404019200 B as a max limit (20% grace limit added, divider=1)
[2026-01-09 19:55:35] 2026-01-09 18:54:54,521 | INFO     | 
[2026-01-09 19:55:35] 2026-01-09 18:54:54,521 | INFO     | job summary report
[2026-01-09 19:55:35] 2026-01-09 18:54:54,521 | INFO     | --------------------------------------------------
[2026-01-09 19:55:35] 2026-01-09 18:54:54,521 | INFO     | PanDA job id: 6963165653
[2026-01-09 19:55:35] 2026-01-09 18:54:54,522 | INFO     | task id: 47898826
[2026-01-09 19:55:35] 2026-01-09 18:54:54,522 | INFO     | errors: (none)
[2026-01-09 19:55:35] 2026-01-09 18:54:54,522 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 19:55:35] 2026-01-09 18:54:54,522 | INFO     | pilot state: finished 
[2026-01-09 19:55:35] 2026-01-09 18:54:54,522 | INFO     | transexitcode: 0
[2026-01-09 19:55:35] 2026-01-09 18:54:54,522 | INFO     | exeerrorcode: 0
[2026-01-09 19:55:35] 2026-01-09 18:54:54,522 | INFO     | exeerrordiag: 
[2026-01-09 19:55:35] 2026-01-09 18:54:54,522 | INFO     | exitcode: 0
[2026-01-09 19:55:35] 2026-01-09 18:54:54,523 | INFO     | exitmsg: OK
[2026-01-09 19:55:35] 2026-01-09 18:54:54,523 | INFO     | cpuconsumptiontime: 69758 s
[2026-01-09 19:55:35] 2026-01-09 18:54:54,523 | INFO     | nevents: 400
[2026-01-09 19:55:35] 2026-01-09 18:54:54,523 | INFO     | neventsw: 0
[2026-01-09 19:55:35] 2026-01-09 18:54:54,523 | INFO     | pid: 22453
[2026-01-09 19:55:35] 2026-01-09 18:54:54,523 | INFO     | pgrp: 22453
[2026-01-09 19:55:35] 2026-01-09 18:54:54,523 | INFO     | corecount: 8
[2026-01-09 19:55:35] 2026-01-09 18:54:54,523 | INFO     | event service: False
[2026-01-09 19:55:35] 2026-01-09 18:54:54,523 | INFO     | sizes: {0: 2283801, 1: 2284000, 7: 2284262, 11: 2284290, 9195: 2312314, 9196: 2321314, 9197: 2321498, 9203: 2321692}
[2026-01-09 19:55:35] 2026-01-09 18:54:54,523 | INFO     | --------------------------------------------------
[2026-01-09 19:55:35] 2026-01-09 18:54:54,524 | INFO     | 
[2026-01-09 19:55:35] 2026-01-09 18:54:54,524 | INFO     | executing command: ls -lF /var/lib/boinc/slots/18
[2026-01-09 19:55:35] 2026-01-09 18:54:54,528 | INFO     | size of work directory /var/lib/boinc/slots/18/PanDA_Pilot-6963165653: 4063435 B (within 4404019200 B limit)
[2026-01-09 19:55:35] 2026-01-09 18:54:54,529 | INFO     | pfn file=/var/lib/boinc/slots/18/PanDA_Pilot-6963165653/HITS.47898826._034872.pool.root.1 does not exist (skip from workdir size calculation)
[2026-01-09 19:55:35] 2026-01-09 18:54:54,529 | INFO     | total size of present files: 0 B (workdir size: 4063435 B)
[2026-01-09 19:55:35] 2026-01-09 18:54:54,529 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/18/PanDA_Pilot-6963165653/HITS.47898826._034872.pool.root.1 since it does not exist
[2026-01-09 19:55:35] 2026-01-09 18:54:54,559 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 19:55:35] 2026-01-09 18:54:54,559 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 19:55:35] 2026-01-09 18:54:54,559 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 19:55:35] 2026-01-09 18:54:54,559 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 19:55:35] 2026-01-09 18:54:54,559 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 19:55:35] 2026-01-09 18:54:54,559 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 19:55:35] 2026-01-09 18:54:54,560 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 19:55:35] 2026-01-09 18:54:54,560 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 19:55:35] 2026-01-09 18:54:54,560 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 19:55:35] 2026-01-09 18:54:54,560 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 19:55:35] 2026-01-09 18:54:54,560 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 19:55:35] 2026-01-09 18:54:54,560 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 19:55:35] 2026-01-09 18:54:54,560 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 19:55:35] 2026-01-09 18:54:54,560 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 19:55:35] 2026-01-09 18:54:54,561 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 19:55:35] 2026-01-09 18:54:54,561 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 19:55:35] 2026-01-09 18:54:54,561 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 19:55:35] 2026-01-09 18:54:54,561 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 19:55:35] 2026-01-09 18:54:54,561 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 19:55:35] 2026-01-09 18:54:54,561 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 19:55:35] 2026-01-09 18:54:54,562 | INFO     | job 6963165653 has completed (purged errors)
[2026-01-09 19:55:35] 2026-01-09 18:54:54,562 | INFO     | overall cleanup function is called
[2026-01-09 19:55:35] 2026-01-09 18:54:54,596 | INFO     | number of running child processes to parent process 22453: 1
[2026-01-09 19:55:35] 2026-01-09 18:54:54,596 | INFO     | maximum number of monitored processes: 6
[2026-01-09 19:55:35] 2026-01-09 18:54:54,596 | INFO     | aborting job monitoring since job object (job id=6963165653) has expired
[2026-01-09 19:55:35] 2026-01-09 18:54:55,572 | INFO     | --- collectZombieJob: --- 10, [22453]
[2026-01-09 19:55:35] 2026-01-09 18:54:55,572 | INFO     | zombie collector waiting for pid 22453
[2026-01-09 19:55:35] 2026-01-09 18:54:55,572 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 19:55:35] 2026-01-09 18:54:55,572 | INFO     | collected zombie processes
[2026-01-09 19:55:35] 2026-01-09 18:54:55,572 | INFO     | will attempt to kill all subprocesses of pid=22453
[2026-01-09 19:55:35] 2026-01-09 18:54:55,625 | INFO     | process IDs to be killed: [22453] (in reverse order)
[2026-01-09 19:55:35] 2026-01-09 18:54:55,683 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 19:55:35] 2026-01-09 18:54:55,684 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 19:55:35] 2026-01-09 18:54:55,685 | INFO     | did not find any defunct processes belonging to 22453
[2026-01-09 19:55:35] 2026-01-09 18:54:55,687 | INFO     | did not find any defunct processes belonging to 22453
[2026-01-09 19:55:35] 2026-01-09 18:54:55,687 | INFO     | ready for new job
[2026-01-09 19:55:35] 2026-01-09 18:54:55,687 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 19:55:35] 2026-01-09 18:54:55,689 | INFO     | ***************************************
[2026-01-09 19:55:35] 2026-01-09 18:54:55,689 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 19:55:35] 2026-01-09 18:54:55,689 | INFO     | ***************************************
[2026-01-09 19:55:35] 2026-01-09 18:54:55,689 | INFO     | 
[2026-01-09 19:55:35] 2026-01-09 18:54:55,690 | INFO     | pilot is running in a VM
[2026-01-09 19:55:35] 2026-01-09 18:54:55,690 | INFO     | architecture information:
[2026-01-09 19:55:35] 2026-01-09 18:54:55,690 | INFO     | executing command: cat /etc/os-release
[2026-01-09 19:55:35] 2026-01-09 18:54:55,709 | INFO     | cat /etc/os-release:
[2026-01-09 19:55:35] NAME="CentOS Linux"
[2026-01-09 19:55:35] VERSION="7 (Core)"
[2026-01-09 19:55:35] ID="centos"
[2026-01-09 19:55:35] ID_LIKE="rhel fedora"
[2026-01-09 19:55:35] VERSION_ID="7"
[2026-01-09 19:55:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 19:55:35] ANSI_COLOR="0;31"
[2026-01-09 19:55:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 19:55:35] HOME_URL="https://www.centos.org/"
[2026-01-09 19:55:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 19:55:35] 
[2026-01-09 19:55:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 19:55:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 19:55:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 19:55:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 19:55:35] 
[2026-01-09 19:55:35] 2026-01-09 18:54:55,710 | INFO     | ***************************************
[2026-01-09 19:55:35] 2026-01-09 18:54:56,213 | INFO     | executing command: df -mP /var/lib/boinc/slots/18
[2026-01-09 19:55:35] 2026-01-09 18:54:56,245 | INFO     | sufficient remaining disk space (498107154432 B)
[2026-01-09 19:55:35] 2026-01-09 18:54:56,245 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 19:55:35] 2026-01-09 18:54:56,245 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 19:55:35] 2026-01-09 18:54:56,246 | INFO     | update_server=False
[2026-01-09 19:55:35] 2026-01-09 18:54:56,246 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 19:55:35] 2026-01-09 18:54:56,246 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 19:55:35] 2026-01-09 18:54:56,247 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 19:55:35] 2026-01-09 18:54:56,247 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 19:55:35] 2026-01-09 18:54:56,247 | INFO     | aborting loop
[2026-01-09 19:55:35] 2026-01-09 18:54:56,561 | INFO     | all data control threads have been joined
[2026-01-09 19:55:35] 2026-01-09 18:54:57,252 | INFO     | [job] retrieve thread has finished
[2026-01-09 19:55:35] 2026-01-09 18:54:57,253 | INFO     | [job] queue monitor thread has finished
[2026-01-09 19:55:35] 2026-01-09 18:54:57,254 | INFO     | [job] job monitor thread has finished
[2026-01-09 19:55:35] 2026-01-09 18:54:57,312 | INFO     | [job] validate thread has finished
[2026-01-09 19:55:35] 2026-01-09 18:54:57,323 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 19:55:35] 2026-01-09 18:54:57,566 | INFO     | [data] control thread has finished
[2026-01-09 19:55:35] 2026-01-09 18:54:57,661 | INFO     | [data] copytool_in thread has finished
[2026-01-09 19:55:35] 2026-01-09 18:54:57,692 | INFO     | all payload control threads have been joined
[2026-01-09 19:55:35] 2026-01-09 18:54:57,734 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 19:55:35] 2026-01-09 18:54:57,754 | INFO     | all job control threads have been joined
[2026-01-09 19:55:35] 2026-01-09 18:54:57,941 | INFO     | [payload] failed_post thread has finished
[2026-01-09 19:55:35] 2026-01-09 18:54:58,015 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 19:55:35] 2026-01-09 18:54:58,254 | INFO     | [data] copytool_out thread has finished
[2026-01-09 19:55:35] 2026-01-09 18:54:58,491 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 19:55:35] 2026-01-09 18:54:58,698 | INFO     | [payload] control thread has finished
[2026-01-09 19:55:35] 2026-01-09 18:54:58,759 | INFO     | [job] control thread has finished
[2026-01-09 19:55:35] 2026-01-09 18:54:58,820 | INFO     | [payload] validate_post thread has finished
[2026-01-09 19:55:35] 2026-01-09 18:55:02,498 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 19:55:35] 2026-01-09 18:55:07,127 | INFO     | job.realtimelogging is not enabled
[2026-01-09 19:55:35] 2026-01-09 18:55:08,133 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 19:55:35] 2026-01-09 18:55:26,032 | INFO     | PID=16023 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 19:55:35] 2026-01-09 18:55:26,033 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 19:55:35] 2026-01-09 18:55:26,033 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 19:55:35] 2026-01-09 18:55:26,034 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 19:55:35] 2026-01-09 18:55:29,296 | INFO     | [monitor] cgroup control has ended
[2026-01-09 19:55:35] 2026-01-09 18:55:29,747 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140307933792064)>', '<ExcThread(monitor, started 140307496683264)>']
[2026-01-09 19:55:35] 2026-01-09 18:55:30,054 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 19:55:35] 2026-01-09 18:55:30,055 | INFO     | [monitor] control thread has ended
[2026-01-09 19:55:35] 2026-01-09 18:55:34,771 | INFO     | all workflow threads have been joined
[2026-01-09 19:55:35] 2026-01-09 18:55:34,771 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 19:55:35] 2026-01-09 18:55:34,771 | INFO     | traces error code: 0
[2026-01-09 19:55:35] 2026-01-09 18:55:34,771 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 19:55:35] 2026-01-09 18:55:34,912 [wrapper] ==== pilot stdout END ====
[2026-01-09 19:55:35] 2026-01-09 18:55:34,917 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 19:55:35] 2026-01-09 18:55:34,921 [wrapper] pilotpid: 16023
[2026-01-09 19:55:35] 2026-01-09 18:55:34,929 [wrapper] Pilot exit status: 0
[2026-01-09 19:55:35] 2026-01-09 18:55:34,946 [wrapper] pandaids: 6963165653
[2026-01-09 19:55:35] 2026-01-09 18:55:34,983 [wrapper] cleanup supervisor_pilot  6849 16024
[2026-01-09 19:55:35] 2026-01-09 18:55:34,987 [wrapper] Test setup, not cleaning
[2026-01-09 19:55:35] 2026-01-09 18:55:34,990 [wrapper] apfmon messages muted
[2026-01-09 19:55:35] 2026-01-09 18:55:34,993 [wrapper] ==== wrapper stdout END ====
[2026-01-09 19:55:35] 2026-01-09 18:55:34,996 [wrapper] ==== wrapper stderr END ====
[2026-01-09 19:55:35]  *** Error codes and diagnostics ***
[2026-01-09 19:55:35]     "exeErrorCode": 0,
[2026-01-09 19:55:35]     "exeErrorDiag": "",
[2026-01-09 19:55:35]     "pilotErrorCode": 0,
[2026-01-09 19:55:35]     "pilotErrorDiag": "",
[2026-01-09 19:55:35]  *** Listing of results directory ***
[2026-01-09 19:55:35] total 439168
[2026-01-09 19:55:35] -rw-r--r--. 1 boinc boinc    579449 Jan  9 01:55 pilot3.tar.gz
[2026-01-09 19:55:35] -rwx------. 1 boinc boinc     36322 Jan  9 01:55 runpilot2-wrapper.sh
[2026-01-09 19:55:35] -rw-r--r--. 1 boinc boinc      5112 Jan  9 01:55 queuedata.json
[2026-01-09 19:55:35] -rw-r--r--. 1 boinc boinc       100 Jan  9 17:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 19:55:35] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 17:20 run_atlas
[2026-01-09 19:55:35] -rw-r--r--. 1 boinc boinc       105 Jan  9 17:20 job.xml
[2026-01-09 19:55:35] -rw-r--r--. 1 boinc boinc      6392 Jan  9 17:20 init_data.xml
[2026-01-09 19:55:35] -rw-r--r--. 2 boinc boinc 224020505 Jan  9 17:20 EVNT.47898824._001350.pool.root.1
[2026-01-09 19:55:35] -rw-r--r--. 2 boinc boinc     15847 Jan  9 17:20 start_atlas.sh
[2026-01-09 19:55:35] drwxrwx--x. 2 boinc boinc        68 Jan  9 17:20 shared
[2026-01-09 19:55:35] -rw-r--r--. 2 boinc boinc    592393 Jan  9 17:20 input.tar.gz
[2026-01-09 19:55:35] -rw-r--r--. 1 boinc boinc         0 Jan  9 17:20 boinc_lockfile
[2026-01-09 19:55:35] -rw-r--r--. 1 boinc boinc      2520 Jan  9 17:20 pandaJob.out
[2026-01-09 19:55:35] -rw-------. 1 boinc boinc    989356 Jan  9 17:21 agis_schedconf.cvmfs.json
[2026-01-09 19:55:35] -rw-------. 1 boinc boinc   1516240 Jan  9 17:21 agis_ddmendpoints.agis.ALL.json
[2026-01-09 19:55:35] drwx------. 5 boinc boinc      4096 Jan  9 17:21 pilot3
[2026-01-09 19:55:35] -rw-------. 1 boinc boinc 218509791 Jan  9 19:54 HITS.47898826._034872.pool.root.1
[2026-01-09 19:55:35] -rw-r--r--. 1 boinc boinc       530 Jan  9 19:54 boinc_task_state.xml
[2026-01-09 19:55:35] -rw-------. 1 boinc boinc      1011 Jan  9 19:54 memory_monitor_summary.json
[2026-01-09 19:55:35] -rw-------. 1 boinc boinc    399243 Jan  9 19:54 log.47898826._034872.job.log.tgz.1
[2026-01-09 19:55:35] -rw-------. 1 boinc boinc      7770 Jan  9 19:54 heartbeat.json
[2026-01-09 19:55:35] -rw-r--r--. 1 boinc boinc        27 Jan  9 19:55 wrapper_checkpoint.txt
[2026-01-09 19:55:35] -rw-r--r--. 1 boinc boinc      8192 Jan  9 19:55 boinc_mmap_file
[2026-01-09 19:55:35] -rw-------. 1 boinc boinc        95 Jan  9 19:55 pilot_heartbeat.json
[2026-01-09 19:55:35] -rw-------. 1 boinc boinc      4882 Jan  9 19:55 pilotlog.txt
[2026-01-09 19:55:35] -rw-------. 1 boinc boinc   1239861 Jan  9 19:55 log.47898826._034872.job.log.1
[2026-01-09 19:55:35] -rw-------. 1 boinc boinc       357 Jan  9 19:55 output.list
[2026-01-09 19:55:35] -rw-r--r--. 1 boinc boinc       620 Jan  9 19:55 runtime_log
[2026-01-09 19:55:35] -rw-------. 1 boinc boinc   1658880 Jan  9 19:55 result.tar.gz
[2026-01-09 19:55:35] -rw-r--r--. 1 boinc boinc      8832 Jan  9 19:55 runtime_log.err
[2026-01-09 19:55:35] -rw-------. 1 boinc boinc       652 Jan  9 19:55 KOGNDmhxFy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmchlKDmYQmMWn.diag
[2026-01-09 19:55:35] -rw-r--r--. 1 boinc boinc     21014 Jan  9 19:55 stderr.txt
[2026-01-09 19:55:35] HITS file was successfully produced:
[2026-01-09 19:55:35] -rw-------. 1 boinc boinc 218509791 Jan  9 19:54 shared/HITS.pool.root.1
[2026-01-09 19:55:35]  *** Contents of shared directory: ***
[2026-01-09 19:55:35] total 434380
[2026-01-09 19:55:35] -rw-r--r--. 2 boinc boinc 224020505 Jan  9 17:20 ATLAS.root_0
[2026-01-09 19:55:35] -rw-r--r--. 2 boinc boinc     15847 Jan  9 17:20 start_atlas.sh
[2026-01-09 19:55:35] -rw-r--r--. 2 boinc boinc    592393 Jan  9 17:20 input.tar.gz
[2026-01-09 19:55:35] -rw-------. 1 boinc boinc 218509791 Jan  9 19:54 HITS.pool.root.1
[2026-01-09 19:55:35] -rw-------. 1 boinc boinc   1658880 Jan  9 19:55 result.tar.gz
19:55:36 (12305): run_atlas exited; CPU time 69815.087515
19:55:36 (12305): called boinc_finish(0)

</stderr_txt>
]]>

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