Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:37:37 (5357): wrapper (7.7.26015): starting
08:37:37 (5357): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 08:37:37] Arguments: --nthreads 8
[2026-01-09 08:37:37] Threads: 8
[2026-01-09 08:37:37] Checking for CVMFS
[2026-01-09 08:37:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 08:37:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 08:37:37] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 08:37:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 08:37:37] 2.11.2.0 2466 181099 139884 154945 2 59 11804289 18432000 1833 130560 0 118921187 99.979 7133640 30199 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 08:37:37] CVMFS is ok
[2026-01-09 08:37:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 08:37:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 08:37:37] Further information can be found at the LHC@home message board.
[2026-01-09 08:37:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 08:37:37] Checking for apptainer binary...
[2026-01-09 08:37:37] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 08:37:37] Running /usr/bin/apptainer --version
[2026-01-09 08:37:37] apptainer version 1.3.2-1.el7
[2026-01-09 08:37:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 08:37:38] c-206-20.aglt2.org
[2026-01-09 08:37:38] apptainer works
[2026-01-09 08:37:38] Set ATHENA_PROC_NUMBER=8
[2026-01-09 08:37:38] Set ATHENA_CORE_NUMBER=8
[2026-01-09 08:37:38] Starting ATLAS job with PandaID=6963162793
[2026-01-09 08:37:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 12:55:19]  *** The last 200 lines of the pilot log: ***
[2026-01-09 12:55:19] 2026-01-09 17:54:36,875 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2527.875
[2026-01-09 12:55:19] 2026-01-09 17:54:36,879 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6963162793/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 12:55:19] 2026-01-09 17:54:36,880 | INFO     | extracted standard info from prmon json
[2026-01-09 12:55:19] 2026-01-09 17:54:36,881 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 12:55:19] 2026-01-09 17:54:36,881 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 12:55:19] 2026-01-09 17:54:36,881 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 12:55:19] 2026-01-09 17:54:36,881 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 12:55:19] 2026-01-09 17:54:36,889 | INFO     | fitting pss+swap vs Time
[2026-01-09 12:55:19] 2026-01-09 17:54:36,889 | INFO     | sum of square deviations: 5021496942.0
[2026-01-09 12:55:19] 2026-01-09 17:54:36,892 | INFO     | sum of deviations: -19875525567.999996
[2026-01-09 12:55:19] 2026-01-09 17:54:36,892 | INFO     | mean x: 1767973580.0
[2026-01-09 12:55:19] 2026-01-09 17:54:36,892 | INFO     | mean y: 2492692.1581027666
[2026-01-09 12:55:19] 2026-01-09 17:54:36,892 | INFO     | intersect: 7000287273.875582
[2026-01-09 12:55:19] 2026-01-09 17:54:36,893 | INFO     | chi2: 2.678241163392312
[2026-01-09 12:55:19] 2026-01-09 17:54:36,893 | INFO     | sum of square deviations: 4729621702.0
[2026-01-09 12:55:19] 2026-01-09 17:54:36,896 | INFO     | sum of deviations: -595777361.9999982
[2026-01-09 12:55:19] 2026-01-09 17:54:36,896 | INFO     | mean x: 1767973427.5
[2026-01-09 12:55:19] 2026-01-09 17:54:36,896 | INFO     | mean y: 2502607.3387096776
[2026-01-09 12:55:19] 2026-01-09 17:54:36,896 | INFO     | intersect: 225209329.1631278
[2026-01-09 12:55:19] 2026-01-09 17:54:36,897 | INFO     | chi2: 1.6873998690168563
[2026-01-09 12:55:19] 2026-01-09 17:54:36,897 | INFO     | current chi2=1.6873998690168563 (change=36.99596988944927 %)
[2026-01-09 12:55:19] 2026-01-09 17:54:36,897 | INFO     | sum of square deviations: 4449281562.0
[2026-01-09 12:55:19] 2026-01-09 17:54:36,900 | INFO     | sum of deviations: -542880480.0000054
[2026-01-09 12:55:19] 2026-01-09 17:54:36,900 | INFO     | mean x: 1767973275.0
[2026-01-09 12:55:19] 2026-01-09 17:54:36,900 | INFO     | mean y: 2502636.111111111
[2026-01-09 12:55:19] 2026-01-09 17:54:36,900 | INFO     | intersect: 218222447.67721525
[2026-01-09 12:55:19] 2026-01-09 17:54:36,901 | INFO     | chi2: 1.6874247253202495
[2026-01-09 12:55:19] 2026-01-09 17:54:36,901 | INFO     | current chi2=1.6874247253202495 (change=-0.0014730535333979961 %)
[2026-01-09 12:55:19] 2026-01-09 17:54:36,901 | INFO     | right removable region: 242
[2026-01-09 12:55:19] 2026-01-09 17:54:36,902 | INFO     | sum of square deviations: 4729621702.0
[2026-01-09 12:55:19] 2026-01-09 17:54:36,904 | INFO     | sum of deviations: -58851749183.50001
[2026-01-09 12:55:19] 2026-01-09 17:54:36,904 | INFO     | mean x: 1767973732.5
[2026-01-09 12:55:19] 2026-01-09 17:54:36,905 | INFO     | mean y: 2512878.584677419
[2026-01-09 12:55:19] 2026-01-09 17:54:36,905 | INFO     | intersect: 22001808641.31085
[2026-01-09 12:55:19] 2026-01-09 17:54:36,905 | INFO     | chi2: 1.2181425449978214
[2026-01-09 12:55:19] 2026-01-09 17:54:36,905 | INFO     | current chi2=1.2181425449978214 (change=54.5170703203255 %)
[2026-01-09 12:55:19] 2026-01-09 17:54:36,906 | INFO     | sum of square deviations: 4449281562.0
[2026-01-09 12:55:19] 2026-01-09 17:54:36,908 | INFO     | sum of deviations: -58742954433.0
[2026-01-09 12:55:19] 2026-01-09 17:54:36,908 | INFO     | mean x: 1767973885.0
[2026-01-09 12:55:19] 2026-01-09 17:54:36,909 | INFO     | mean y: 2512791.975308642
[2026-01-09 12:55:19] 2026-01-09 17:54:36,909 | INFO     | intersect: 23344710384.56924
[2026-01-09 12:55:19] 2026-01-09 17:54:36,909 | INFO     | chi2: 1.2013557032502136
[2026-01-09 12:55:19] 2026-01-09 17:54:36,910 | INFO     | current chi2=1.2013557032502136 (change=1.378068750372546 %)
[2026-01-09 12:55:19] 2026-01-09 17:54:36,910 | INFO     | left removable region: 20
[2026-01-09 12:55:19] 2026-01-09 17:54:36,910 | INFO     | sum of square deviations: 3392567795.5
[2026-01-09 12:55:19] 2026-01-09 17:54:36,912 | INFO     | sum of deviations: -24280187002.500004
[2026-01-09 12:55:19] 2026-01-09 17:54:36,912 | INFO     | mean x: 1767973854.5
[2026-01-09 12:55:19] 2026-01-09 17:54:36,913 | INFO     | mean y: 2515058.707207207
[2026-01-09 12:55:19] 2026-01-09 17:54:36,913 | INFO     | intersect: 12655684690.196959
[2026-01-09 12:55:19] 2026-01-09 17:54:36,913 | INFO     | chi2: 0.15025114944295337
[2026-01-09 12:55:19] 2026-01-09 17:54:36,913 | INFO     | current memory leak: -7.16 B/s (using 222 data points, chi2=0.15)
[2026-01-09 12:55:19] 2026-01-09 17:54:36,914 | INFO     | could have reported an average CPU frequency of 2566 MHz (12 samples)
[2026-01-09 12:55:19] 2026-01-09 17:54:36,914 | INFO     | ..............................
[2026-01-09 12:55:19] 2026-01-09 17:54:36,914 | INFO     | . Timing measurements:
[2026-01-09 12:55:19] 2026-01-09 17:54:36,914 | INFO     | . get job = 0 s
[2026-01-09 12:55:19] 2026-01-09 17:54:36,914 | INFO     | . initial setup = 2 s
[2026-01-09 12:55:19] 2026-01-09 17:54:36,914 | INFO     | . payload setup = 4 s
[2026-01-09 12:55:19] 2026-01-09 17:54:36,914 | INFO     | . stage-in = 0 s
[2026-01-09 12:55:19] 2026-01-09 17:54:36,914 | INFO     | . payload execution = 15377 s
[2026-01-09 12:55:19] 2026-01-09 17:54:36,914 | INFO     | . stage-out = 2 s
[2026-01-09 12:55:19] 2026-01-09 17:54:36,914 | INFO     | . log creation = 0 s
[2026-01-09 12:55:19] 2026-01-09 17:54:36,915 | INFO     | ..............................
[2026-01-09 12:55:19] 2026-01-09 17:54:37,185 | INFO     | 
[2026-01-09 12:55:19] 2026-01-09 17:54:37,185 | INFO     | job summary report
[2026-01-09 12:55:19] 2026-01-09 17:54:37,186 | INFO     | --------------------------------------------------
[2026-01-09 12:55:19] 2026-01-09 17:54:37,186 | INFO     | PanDA job id: 6963162793
[2026-01-09 12:55:19] 2026-01-09 17:54:37,186 | INFO     | task id: 47898826
[2026-01-09 12:55:19] 2026-01-09 17:54:37,186 | INFO     | errors: (none)
[2026-01-09 12:55:19] 2026-01-09 17:54:37,186 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 12:55:19] 2026-01-09 17:54:37,186 | INFO     | pilot state: finished 
[2026-01-09 12:55:19] 2026-01-09 17:54:37,187 | INFO     | transexitcode: 0
[2026-01-09 12:55:19] 2026-01-09 17:54:37,187 | INFO     | exeerrorcode: 0
[2026-01-09 12:55:19] 2026-01-09 17:54:37,187 | INFO     | exeerrordiag: 
[2026-01-09 12:55:19] 2026-01-09 17:54:37,187 | INFO     | exitcode: 0
[2026-01-09 12:55:19] 2026-01-09 17:54:37,187 | INFO     | exitmsg: OK
[2026-01-09 12:55:19] 2026-01-09 17:54:37,187 | INFO     | cpuconsumptiontime: 117395 s
[2026-01-09 12:55:19] 2026-01-09 17:54:37,188 | INFO     | nevents: 400
[2026-01-09 12:55:19] 2026-01-09 17:54:37,188 | INFO     | neventsw: 0
[2026-01-09 12:55:19] 2026-01-09 17:54:37,188 | INFO     | pid: 15481
[2026-01-09 12:55:19] 2026-01-09 17:54:37,188 | INFO     | pgrp: 15481
[2026-01-09 12:55:19] 2026-01-09 17:54:37,188 | INFO     | corecount: 8
[2026-01-09 12:55:19] 2026-01-09 17:54:37,188 | INFO     | event service: False
[2026-01-09 12:55:19] 2026-01-09 17:54:37,189 | INFO     | sizes: {0: 2283137, 1: 2283993, 2: 2283993, 4: 2284283, 12: 2284311, 15385: 2315621, 15389: 2324675, 15392: 2324813}
[2026-01-09 12:55:19] 2026-01-09 17:54:37,189 | INFO     | --------------------------------------------------
[2026-01-09 12:55:19] 2026-01-09 17:54:37,189 | INFO     | 
[2026-01-09 12:55:19] 2026-01-09 17:54:37,189 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-09 12:55:19] 2026-01-09 17:54:37,208 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 12:55:19] 2026-01-09 17:54:37,208 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 12:55:19] 2026-01-09 17:54:37,208 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 12:55:19] 2026-01-09 17:54:37,209 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 12:55:19] 2026-01-09 17:54:37,209 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 12:55:19] 2026-01-09 17:54:37,209 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 12:55:19] 2026-01-09 17:54:37,209 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 12:55:19] 2026-01-09 17:54:37,209 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 12:55:19] 2026-01-09 17:54:37,209 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 12:55:19] 2026-01-09 17:54:37,210 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 12:55:19] 2026-01-09 17:54:37,210 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 12:55:19] 2026-01-09 17:54:37,210 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 12:55:19] 2026-01-09 17:54:37,210 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 12:55:19] 2026-01-09 17:54:37,210 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 12:55:19] 2026-01-09 17:54:37,210 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 12:55:19] 2026-01-09 17:54:37,211 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 12:55:19] 2026-01-09 17:54:37,211 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 12:55:19] 2026-01-09 17:54:37,211 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 12:55:19] 2026-01-09 17:54:37,211 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 12:55:19] 2026-01-09 17:54:37,211 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 12:55:19] 2026-01-09 17:54:37,212 | INFO     | job 6963162793 has completed (purged errors)
[2026-01-09 12:55:19] 2026-01-09 17:54:37,212 | INFO     | overall cleanup function is called
[2026-01-09 12:55:19] 2026-01-09 17:54:38,220 | INFO     | --- collectZombieJob: --- 10, [15481]
[2026-01-09 12:55:19] 2026-01-09 17:54:38,220 | INFO     | zombie collector waiting for pid 15481
[2026-01-09 12:55:19] 2026-01-09 17:54:38,220 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 12:55:19] 2026-01-09 17:54:38,220 | INFO     | collected zombie processes
[2026-01-09 12:55:19] 2026-01-09 17:54:38,220 | INFO     | will attempt to kill all subprocesses of pid=15481
[2026-01-09 12:55:19] 2026-01-09 17:54:38,363 | INFO     | process IDs to be killed: [15481] (in reverse order)
[2026-01-09 12:55:19] 2026-01-09 17:54:38,498 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 12:55:19] 2026-01-09 17:54:38,499 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 12:55:19] 2026-01-09 17:54:38,504 | INFO     | did not find any defunct processes belonging to 15481
[2026-01-09 12:55:19] 2026-01-09 17:54:38,508 | INFO     | did not find any defunct processes belonging to 15481
[2026-01-09 12:55:19] 2026-01-09 17:54:38,508 | INFO     | ready for new job
[2026-01-09 12:55:19] 2026-01-09 17:54:38,509 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 12:55:19] 2026-01-09 17:54:38,510 | INFO     | ***************************************
[2026-01-09 12:55:19] 2026-01-09 17:54:38,510 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 12:55:19] 2026-01-09 17:54:38,510 | INFO     | ***************************************
[2026-01-09 12:55:19] 2026-01-09 17:54:38,510 | INFO     | 
[2026-01-09 12:55:19] 2026-01-09 17:54:38,511 | INFO     | architecture information:
[2026-01-09 12:55:19] 2026-01-09 17:54:38,511 | INFO     | executing command: cat /etc/os-release
[2026-01-09 12:55:19] 2026-01-09 17:54:38,523 | INFO     | cat /etc/os-release:
[2026-01-09 12:55:19] NAME="CentOS Linux"
[2026-01-09 12:55:19] VERSION="7 (Core)"
[2026-01-09 12:55:19] ID="centos"
[2026-01-09 12:55:19] ID_LIKE="rhel fedora"
[2026-01-09 12:55:19] VERSION_ID="7"
[2026-01-09 12:55:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 12:55:19] ANSI_COLOR="0;31"
[2026-01-09 12:55:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 12:55:19] HOME_URL="https://www.centos.org/"
[2026-01-09 12:55:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 12:55:19] 
[2026-01-09 12:55:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 12:55:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 12:55:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 12:55:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 12:55:19] 
[2026-01-09 12:55:19] 2026-01-09 17:54:38,524 | INFO     | ***************************************
[2026-01-09 12:55:19] 2026-01-09 17:54:39,027 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-09 12:55:19] 2026-01-09 17:54:39,043 | INFO     | sufficient remaining disk space (27931967488 B)
[2026-01-09 12:55:19] 2026-01-09 17:54:39,043 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 12:55:19] 2026-01-09 17:54:39,044 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 12:55:19] 2026-01-09 17:54:39,044 | INFO     | update_server=False
[2026-01-09 12:55:19] 2026-01-09 17:54:39,044 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 12:55:19] 2026-01-09 17:54:39,093 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 12:55:19] 2026-01-09 17:54:39,133 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 12:55:19] 2026-01-09 17:54:39,133 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 12:55:19] 2026-01-09 17:54:39,133 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:55:19] 2026-01-09 17:54:39,133 | INFO     | will abort loop
[2026-01-09 12:55:19] 2026-01-09 17:54:39,613 | INFO     | all job control threads have been joined
[2026-01-09 12:55:19] 2026-01-09 17:54:39,654 | INFO     | all payload control threads have been joined
[2026-01-09 12:55:19] 2026-01-09 17:54:39,673 | INFO     | all data control threads have been joined
[2026-01-09 12:55:19] 2026-01-09 17:54:39,700 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 12:55:19] 2026-01-09 17:54:40,050 | INFO     | [job] retrieve thread has finished
[2026-01-09 12:55:19] 2026-01-09 17:54:40,081 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 12:55:19] 2026-01-09 17:54:40,139 | INFO     | [job] job monitor thread has finished
[2026-01-09 12:55:19] 2026-01-09 17:54:40,550 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 12:55:19] 2026-01-09 17:54:40,561 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 12:55:19] 2026-01-09 17:54:40,567 | INFO     | [data] copytool_in thread has finished
[2026-01-09 12:55:19] 2026-01-09 17:54:40,573 | INFO     | [job] validate thread has finished
[2026-01-09 12:55:19] 2026-01-09 17:54:40,619 | INFO     | [job] control thread has finished
[2026-01-09 12:55:19] 2026-01-09 17:54:40,659 | INFO     | [payload] control thread has finished
[2026-01-09 12:55:19] 2026-01-09 17:54:40,679 | INFO     | [data] control thread has finished
[2026-01-09 12:55:19] 2026-01-09 17:54:40,839 | INFO     | [payload] validate_post thread has finished
[2026-01-09 12:55:19] 2026-01-09 17:54:40,976 | INFO     | [payload] failed_post thread has finished
[2026-01-09 12:55:19] 2026-01-09 17:54:41,100 | INFO     | [data] copytool_out thread has finished
[2026-01-09 12:55:19] 2026-01-09 17:54:42,007 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:55:19] 2026-01-09 17:54:43,012 | INFO     | [job] queue monitor thread has finished
[2026-01-09 12:55:19] 2026-01-09 17:54:43,706 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 12:55:19] 2026-01-09 17:54:49,818 | INFO     | job.realtimelogging is not enabled
[2026-01-09 12:55:19] 2026-01-09 17:54:50,823 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 12:55:19] 2026-01-09 17:55:09,889 | INFO     | PID=9028 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 12:55:19] 2026-01-09 17:55:09,889 | INFO     | .. there are 3 such processes running
[2026-01-09 12:55:19] 2026-01-09 17:55:09,890 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 12:55:19] 2026-01-09 17:55:09,890 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 12:55:19] 2026-01-09 17:55:09,890 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 12:55:19] 2026-01-09 17:55:13,879 | INFO     | [monitor] cgroup control has ended
[2026-01-09 12:55:19] 2026-01-09 17:55:14,255 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139658337711936)>', '<ExcThread(monitor, started 139657773840128)>']
[2026-01-09 12:55:19] 2026-01-09 17:55:14,913 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 12:55:19] 2026-01-09 17:55:14,913 | INFO     | [monitor] control thread has ended
[2026-01-09 12:55:19] 2026-01-09 17:55:19,280 | INFO     | all workflow threads have been joined
[2026-01-09 12:55:19] 2026-01-09 17:55:19,280 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 12:55:19] 2026-01-09 17:55:19,280 | INFO     | traces error code: 0
[2026-01-09 12:55:19] 2026-01-09 17:55:19,281 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 12:55:19] 2026-01-09 17:55:19,382 [wrapper] ==== pilot stdout END ====
[2026-01-09 12:55:19] 2026-01-09 17:55:19,385 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 12:55:19] 2026-01-09 17:55:19,387 [wrapper] pilotpid: 9028
[2026-01-09 12:55:19] 2026-01-09 17:55:19,390 [wrapper] Pilot exit status: 0
[2026-01-09 12:55:19] 2026-01-09 17:55:19,398 [wrapper] pandaids: 6963162793
[2026-01-09 12:55:19] 2026-01-09 17:55:19,424 [wrapper] cleanup supervisor_pilot  9857 9029
[2026-01-09 12:55:19] 2026-01-09 17:55:19,427 [wrapper] Test setup, not cleaning
[2026-01-09 12:55:19] 2026-01-09 17:55:19,429 [wrapper] apfmon messages muted
[2026-01-09 12:55:19] 2026-01-09 17:55:19,431 [wrapper] ==== wrapper stdout END ====
[2026-01-09 12:55:19] 2026-01-09 17:55:19,433 [wrapper] ==== wrapper stderr END ====
[2026-01-09 12:55:19]  *** Error codes and diagnostics ***
[2026-01-09 12:55:19]     "exeErrorCode": 0,
[2026-01-09 12:55:19]     "exeErrorDiag": "",
[2026-01-09 12:55:19]     "pilotErrorCode": 0,
[2026-01-09 12:55:19]     "pilotErrorDiag": "",
[2026-01-09 12:55:19]  *** Listing of results directory ***
[2026-01-09 12:55:19] total 444076
[2026-01-09 12:55:19] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 19:55 pilot3.tar.gz
[2026-01-09 12:55:19] -rwx------ 1 boincer umatlas     36322 Jan  8 19:55 runpilot2-wrapper.sh
[2026-01-09 12:55:19] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 19:55 queuedata.json
[2026-01-09 12:55:19] -rw-r--r-- 1 boincer umatlas       100 Jan  9 08:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 12:55:19] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 08:37 run_atlas
[2026-01-09 12:55:19] -rw-r--r-- 1 boincer umatlas       105 Jan  9 08:37 job.xml
[2026-01-09 12:55:19] -rw-r--r-- 2 boincer umatlas 225761115 Jan  9 08:37 EVNT.47898824._001310.pool.root.1
[2026-01-09 12:55:19] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 08:37 start_atlas.sh
[2026-01-09 12:55:19] drwxrwx--x 2 boincer umatlas      4096 Jan  9 08:37 shared
[2026-01-09 12:55:19] -rw-r--r-- 2 boincer umatlas    592397 Jan  9 08:37 input.tar.gz
[2026-01-09 12:55:19] -rw-r--r-- 1 boincer umatlas         0 Jan  9 08:37 boinc_lockfile
[2026-01-09 12:55:19] -rw-r--r-- 1 boincer umatlas      2517 Jan  9 08:37 pandaJob.out
[2026-01-09 12:55:19] -rw------- 1 boincer umatlas        57 Jan  9 08:37 setup.sh.local
[2026-01-09 12:55:19] -rw------- 1 boincer umatlas    989377 Jan  9 08:37 agis_schedconf.cvmfs.json
[2026-01-09 12:55:19] drwx------ 5 boincer umatlas      4096 Jan  9 08:37 pilot3
[2026-01-09 12:55:19] -rw-r--r-- 1 boincer umatlas      5953 Jan  9 12:49 init_data.xml
[2026-01-09 12:55:19] -rw------- 1 boincer umatlas 219830452 Jan  9 12:53 HITS.47898826._034349.pool.root.1
[2026-01-09 12:55:19] -rw-r--r-- 1 boincer umatlas       532 Jan  9 12:54 boinc_task_state.xml
[2026-01-09 12:55:19] -rw------- 1 boincer umatlas      1054 Jan  9 12:54 memory_monitor_summary.json
[2026-01-09 12:55:19] -rw------- 1 boincer umatlas   1516240 Jan  9 12:54 agis_ddmendpoints.agis.ALL.json
[2026-01-09 12:55:19] -rw------- 1 boincer umatlas    466742 Jan  9 12:54 log.47898826._034349.job.log.tgz.1
[2026-01-09 12:55:19] -rw------- 1 boincer umatlas      7858 Jan  9 12:54 heartbeat.json
[2026-01-09 12:55:19] -rw------- 1 boincer umatlas        95 Jan  9 12:55 pilot_heartbeat.json
[2026-01-09 12:55:19] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 12:55 boinc_mmap_file
[2026-01-09 12:55:19] -rw-r--r-- 1 boincer umatlas        29 Jan  9 12:55 wrapper_checkpoint.txt
[2026-01-09 12:55:19] -rw------- 1 boincer umatlas      5078 Jan  9 12:55 pilotlog.txt
[2026-01-09 12:55:19] -rw------- 1 boincer umatlas   2145416 Jan  9 12:55 log.47898826._034349.job.log.1
[2026-01-09 12:55:19] -rw------- 1 boincer umatlas       357 Jan  9 12:55 output.list
[2026-01-09 12:55:19] -rw-r--r-- 1 boincer umatlas       620 Jan  9 12:55 runtime_log
[2026-01-09 12:55:19] -rw------- 1 boincer umatlas   2631680 Jan  9 12:55 result.tar.gz
[2026-01-09 12:55:19] -rw-r--r-- 1 boincer umatlas      9343 Jan  9 12:55 runtime_log.err
[2026-01-09 12:55:19] -rw------- 1 boincer umatlas       663 Jan  9 12:55 FfOMDmhxFy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmyglKDmLYz4Wm.diag
[2026-01-09 12:55:19] -rw-r--r-- 1 boincer umatlas     21054 Jan  9 12:55 stderr.txt
[2026-01-09 12:55:19] HITS file was successfully produced:
[2026-01-09 12:55:19] -rw------- 1 boincer umatlas 219830452 Jan  9 12:53 shared/HITS.pool.root.1
[2026-01-09 12:55:19]  *** Contents of shared directory: ***
[2026-01-09 12:55:19] total 438328
[2026-01-09 12:55:19] -rw-r--r-- 2 boincer umatlas 225761115 Jan  9 08:37 ATLAS.root_0
[2026-01-09 12:55:19] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 08:37 start_atlas.sh
[2026-01-09 12:55:19] -rw-r--r-- 2 boincer umatlas    592397 Jan  9 08:37 input.tar.gz
[2026-01-09 12:55:19] -rw------- 1 boincer umatlas 219830452 Jan  9 12:53 HITS.pool.root.1
[2026-01-09 12:55:19] -rw------- 1 boincer umatlas   2631680 Jan  9 12:55 result.tar.gz
12:55:21 (5357): run_atlas exited; CPU time 117603.749323
12:55:21 (5357): called boinc_finish(0)

</stderr_txt>
]]>

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