Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:36:19 (30832): wrapper (7.7.26015): starting
16:36:19 (30832): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 16:36:19] Arguments: --nthreads 8
[2026-01-09 16:36:19] Threads: 8
[2026-01-09 16:36:19] Checking for CVMFS
[2026-01-09 16:36:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 16:36:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 16:36:19] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 16:36:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 16:36:19] 2.11.2.0 26786 35602 97408 154948 0 57 18777434 25165824 0 130560 0 15114462 99.836 9531192 3291 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 16:36:19] CVMFS is ok
[2026-01-09 16:36:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 16:36:19] Checking for apptainer binary...
[2026-01-09 16:36:19] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 16:36:19] Running /usr/bin/apptainer --version
[2026-01-09 16:36:19] apptainer version 1.3.2-1.el7
[2026-01-09 16:36:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 16:36:21] cg-vwn410.simple-grid.lan
[2026-01-09 16:36:21] apptainer works
[2026-01-09 16:36:21] Set ATHENA_PROC_NUMBER=8
[2026-01-09 16:36:21] Set ATHENA_CORE_NUMBER=8
[2026-01-09 16:36:21] Starting ATLAS job with PandaID=6963162682
[2026-01-09 16:36:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 19:24:00]  *** The last 200 lines of the pilot log: ***
[2026-01-09 19:24:00] 2026-01-09 18:23:01,524 | WARNING  | process 8590 can no longer be monitored (due to stat problems) - aborting
[2026-01-09 19:24:00] 2026-01-09 18:23:01,525 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6963162682/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 19:24:00] 2026-01-09 18:23:01,588 | INFO     | number of running child processes to parent process 8590: 1
[2026-01-09 19:24:00] 2026-01-09 18:23:01,589 | INFO     | maximum number of monitored processes: 6
[2026-01-09 19:24:00] 2026-01-09 18:23:02,074 | INFO     | time since job start (9984s) is within the limit (349056.0s)
[2026-01-09 19:24:00] 2026-01-09 18:23:04,080 | INFO     | time since job start (9986s) is within the limit (349056.0s)
[2026-01-09 19:24:00] 2026-01-09 18:23:04,091 | INFO     | monitor loop #683: job 0:6963162682 is in state 'finished'
[2026-01-09 19:24:00] 2026-01-09 18:23:04,091 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 19:24:00] 2026-01-09 18:23:05,444 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 19:24:00] 2026-01-09 18:23:05,445 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 19:24:00] 2026-01-09 18:23:05,447 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6963162682/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 19:24:00] 2026-01-09 18:23:05,448 | INFO     | extracted standard info from prmon json
[2026-01-09 19:24:00] 2026-01-09 18:23:05,448 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 19:24:00] 2026-01-09 18:23:05,448 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 19:24:00] 2026-01-09 18:23:05,448 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 19:24:00] 2026-01-09 18:23:05,449 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 19:24:00] 2026-01-09 18:23:05,453 | INFO     | fitting pss+swap vs Time
[2026-01-09 19:24:00] 2026-01-09 18:23:05,453 | INFO     | sum of square deviations: 1342841922.0
[2026-01-09 19:24:00] 2026-01-09 18:23:05,454 | INFO     | sum of deviations: -1640625927.0000029
[2026-01-09 19:24:00] 2026-01-09 18:23:05,454 | INFO     | mean x: 1767977972.0
[2026-01-09 19:24:00] 2026-01-09 18:23:05,455 | INFO     | mean y: 2523369.9509202456
[2026-01-09 19:24:00] 2026-01-09 18:23:05,455 | INFO     | intersect: 2162562054.8528686
[2026-01-09 19:24:00] 2026-01-09 18:23:05,455 | INFO     | chi2: 1.691161548920967
[2026-01-09 19:24:00] 2026-01-09 18:23:05,456 | INFO     | sum of square deviations: 1223016419.5
[2026-01-09 19:24:00] 2026-01-09 18:23:05,457 | INFO     | sum of deviations: -1415378485.9999986
[2026-01-09 19:24:00] 2026-01-09 18:23:05,457 | INFO     | mean x: 1767977819.5
[2026-01-09 19:24:00] 2026-01-09 18:23:05,457 | INFO     | mean y: 2523656.7215189873
[2026-01-09 19:24:00] 2026-01-09 18:23:05,457 | INFO     | intersect: 2048577764.8654764
[2026-01-09 19:24:00] 2026-01-09 18:23:05,457 | INFO     | chi2: 1.6914093891274067
[2026-01-09 19:24:00] 2026-01-09 18:23:05,458 | INFO     | current chi2=1.6914093891274067 (change=-0.014655028468319595 %)
[2026-01-09 19:24:00] 2026-01-09 18:23:05,458 | INFO     | right removable region: 157
[2026-01-09 19:24:00] 2026-01-09 18:23:05,458 | INFO     | sum of square deviations: 1223016419.5
[2026-01-09 19:24:00] 2026-01-09 18:23:05,459 | INFO     | sum of deviations: -27044932397.500004
[2026-01-09 19:24:00] 2026-01-09 18:23:05,459 | INFO     | mean x: 1767978124.5
[2026-01-09 19:24:00] 2026-01-09 18:23:05,460 | INFO     | mean y: 2555258.3734177216
[2026-01-09 19:24:00] 2026-01-09 18:23:05,460 | INFO     | intersect: 39098390845.690605
[2026-01-09 19:24:00] 2026-01-09 18:23:05,460 | INFO     | chi2: 0.16570179776456503
[2026-01-09 19:24:00] 2026-01-09 18:23:05,460 | INFO     | current chi2=0.16570179776456503 (change=90.20189420281642 %)
[2026-01-09 19:24:00] 2026-01-09 18:23:05,461 | INFO     | sum of square deviations: 1110539892.0
[2026-01-09 19:24:00] 2026-01-09 18:23:05,462 | INFO     | sum of deviations: -26166829559.000008
[2026-01-09 19:24:00] 2026-01-09 18:23:05,462 | INFO     | mean x: 1767978277.0
[2026-01-09 19:24:00] 2026-01-09 18:23:05,462 | INFO     | mean y: 2553992.947712418
[2026-01-09 19:24:00] 2026-01-09 18:23:05,462 | INFO     | intersect: 41660117644.225815
[2026-01-09 19:24:00] 2026-01-09 18:23:05,462 | INFO     | chi2: 0.1476067625243563
[2026-01-09 19:24:00] 2026-01-09 18:23:05,463 | INFO     | current chi2=0.1476067625243563 (change=10.92024074833442 %)
[2026-01-09 19:24:00] 2026-01-09 18:23:05,463 | INFO     | left removable region: 20
[2026-01-09 19:24:00] 2026-01-09 18:23:05,463 | INFO     | sum of square deviations: 797291228.0
[2026-01-09 19:24:00] 2026-01-09 18:23:05,464 | INFO     | sum of deviations: -15842174031.0
[2026-01-09 19:24:00] 2026-01-09 18:23:05,464 | INFO     | mean x: 1767978399.0
[2026-01-09 19:24:00] 2026-01-09 18:23:05,464 | INFO     | mean y: 2540583.861313869
[2026-01-09 19:24:00] 2026-01-09 18:23:05,464 | INFO     | intersect: 35132265452.7354
[2026-01-09 19:24:00] 2026-01-09 18:23:05,465 | INFO     | chi2: 0.12471283686108685
[2026-01-09 19:24:00] 2026-01-09 18:23:05,465 | INFO     | current memory leak: -19.87 B/s (using 137 data points, chi2=0.12)
[2026-01-09 19:24:00] 2026-01-09 18:23:05,465 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-01-09 19:24:00] 2026-01-09 18:23:05,466 | INFO     | ..............................
[2026-01-09 19:24:00] 2026-01-09 18:23:05,466 | INFO     | . Timing measurements:
[2026-01-09 19:24:00] 2026-01-09 18:23:05,466 | INFO     | . get job = 0 s
[2026-01-09 19:24:00] 2026-01-09 18:23:05,466 | INFO     | . initial setup = 2 s
[2026-01-09 19:24:00] 2026-01-09 18:23:05,466 | INFO     | . payload setup = 7 s
[2026-01-09 19:24:00] 2026-01-09 18:23:05,466 | INFO     | . stage-in = 0 s
[2026-01-09 19:24:00] 2026-01-09 18:23:05,466 | INFO     | . payload execution = 9950 s
[2026-01-09 19:24:00] 2026-01-09 18:23:05,466 | INFO     | . stage-out = 1 s
[2026-01-09 19:24:00] 2026-01-09 18:23:05,466 | INFO     | . log creation = 0 s
[2026-01-09 19:24:00] 2026-01-09 18:23:05,467 | INFO     | ..............................
[2026-01-09 19:24:00] 2026-01-09 18:23:05,584 | INFO     | 
[2026-01-09 19:24:00] 2026-01-09 18:23:05,585 | INFO     | job summary report
[2026-01-09 19:24:00] 2026-01-09 18:23:05,585 | INFO     | --------------------------------------------------
[2026-01-09 19:24:00] 2026-01-09 18:23:05,585 | INFO     | PanDA job id: 6963162682
[2026-01-09 19:24:00] 2026-01-09 18:23:05,585 | INFO     | task id: 47898826
[2026-01-09 19:24:00] 2026-01-09 18:23:05,585 | INFO     | errors: (none)
[2026-01-09 19:24:00] 2026-01-09 18:23:05,585 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 19:24:00] 2026-01-09 18:23:05,585 | INFO     | pilot state: finished 
[2026-01-09 19:24:00] 2026-01-09 18:23:05,585 | INFO     | transexitcode: 0
[2026-01-09 19:24:00] 2026-01-09 18:23:05,586 | INFO     | exeerrorcode: 0
[2026-01-09 19:24:00] 2026-01-09 18:23:05,586 | INFO     | exeerrordiag: 
[2026-01-09 19:24:00] 2026-01-09 18:23:05,586 | INFO     | exitcode: 0
[2026-01-09 19:24:00] 2026-01-09 18:23:05,586 | INFO     | exitmsg: OK
[2026-01-09 19:24:00] 2026-01-09 18:23:05,586 | INFO     | cpuconsumptiontime: 74088 s
[2026-01-09 19:24:00] 2026-01-09 18:23:05,586 | INFO     | nevents: 400
[2026-01-09 19:24:00] 2026-01-09 18:23:05,586 | INFO     | neventsw: 0
[2026-01-09 19:24:00] 2026-01-09 18:23:05,586 | INFO     | pid: 8590
[2026-01-09 19:24:00] 2026-01-09 18:23:05,586 | INFO     | pgrp: 8590
[2026-01-09 19:24:00] 2026-01-09 18:23:05,586 | INFO     | corecount: 8
[2026-01-09 19:24:00] 2026-01-09 18:23:05,587 | INFO     | event service: False
[2026-01-09 19:24:00] 2026-01-09 18:23:05,587 | INFO     | sizes: {0: 2283971, 6: 2284233, 11: 2284261, 9962: 2312603, 9964: 2321657, 9971: 2321859}
[2026-01-09 19:24:00] 2026-01-09 18:23:05,587 | INFO     | --------------------------------------------------
[2026-01-09 19:24:00] 2026-01-09 18:23:05,587 | INFO     | 
[2026-01-09 19:24:00] 2026-01-09 18:23:05,587 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-01-09 19:24:00] 2026-01-09 18:23:05,611 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 19:24:00] 2026-01-09 18:23:05,612 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 19:24:00] 2026-01-09 18:23:05,612 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 19:24:00] 2026-01-09 18:23:05,612 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 19:24:00] 2026-01-09 18:23:05,612 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 19:24:00] 2026-01-09 18:23:05,612 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 19:24:00] 2026-01-09 18:23:05,612 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 19:24:00] 2026-01-09 18:23:05,612 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 19:24:00] 2026-01-09 18:23:05,612 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 19:24:00] 2026-01-09 18:23:05,613 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 19:24:00] 2026-01-09 18:23:05,613 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 19:24:00] 2026-01-09 18:23:05,613 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 19:24:00] 2026-01-09 18:23:05,613 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 19:24:00] 2026-01-09 18:23:05,613 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 19:24:00] 2026-01-09 18:23:05,613 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 19:24:00] 2026-01-09 18:23:05,613 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 19:24:00] 2026-01-09 18:23:05,613 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 19:24:00] 2026-01-09 18:23:05,613 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 19:24:00] 2026-01-09 18:23:05,614 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 19:24:00] 2026-01-09 18:23:05,614 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 19:24:00] 2026-01-09 18:23:05,614 | INFO     | job 6963162682 has completed (purged errors)
[2026-01-09 19:24:00] 2026-01-09 18:23:05,614 | INFO     | overall cleanup function is called
[2026-01-09 19:24:00] 2026-01-09 18:23:06,622 | INFO     | --- collectZombieJob: --- 10, [8590]
[2026-01-09 19:24:00] 2026-01-09 18:23:06,622 | INFO     | zombie collector waiting for pid 8590
[2026-01-09 19:24:00] 2026-01-09 18:23:06,622 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 19:24:00] 2026-01-09 18:23:06,623 | INFO     | collected zombie processes
[2026-01-09 19:24:00] 2026-01-09 18:23:06,623 | INFO     | will attempt to kill all subprocesses of pid=8590
[2026-01-09 19:24:00] 2026-01-09 18:23:06,687 | INFO     | process IDs to be killed: [8590] (in reverse order)
[2026-01-09 19:24:00] 2026-01-09 18:23:06,735 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 19:24:00] 2026-01-09 18:23:06,735 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 19:24:00] 2026-01-09 18:23:06,737 | INFO     | did not find any defunct processes belonging to 8590
[2026-01-09 19:24:00] 2026-01-09 18:23:06,739 | INFO     | did not find any defunct processes belonging to 8590
[2026-01-09 19:24:00] 2026-01-09 18:23:06,739 | INFO     | ready for new job
[2026-01-09 19:24:00] 2026-01-09 18:23:06,739 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 19:24:00] 2026-01-09 18:23:06,741 | INFO     | ***************************************
[2026-01-09 19:24:00] 2026-01-09 18:23:06,741 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 19:24:00] 2026-01-09 18:23:06,742 | INFO     | ***************************************
[2026-01-09 19:24:00] 2026-01-09 18:23:06,742 | INFO     | 
[2026-01-09 19:24:00] 2026-01-09 18:23:06,742 | INFO     | pilot is running in a VM
[2026-01-09 19:24:00] 2026-01-09 18:23:06,742 | INFO     | architecture information:
[2026-01-09 19:24:00] 2026-01-09 18:23:06,743 | INFO     | executing command: cat /etc/os-release
[2026-01-09 19:24:00] 2026-01-09 18:23:06,761 | INFO     | cat /etc/os-release:
[2026-01-09 19:24:00] NAME="CentOS Linux"
[2026-01-09 19:24:00] VERSION="7 (Core)"
[2026-01-09 19:24:00] ID="centos"
[2026-01-09 19:24:00] ID_LIKE="rhel fedora"
[2026-01-09 19:24:00] VERSION_ID="7"
[2026-01-09 19:24:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 19:24:00] ANSI_COLOR="0;31"
[2026-01-09 19:24:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 19:24:00] HOME_URL="https://www.centos.org/"
[2026-01-09 19:24:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 19:24:00] 
[2026-01-09 19:24:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 19:24:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 19:24:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 19:24:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 19:24:00] 
[2026-01-09 19:24:00] 2026-01-09 18:23:06,762 | INFO     | ***************************************
[2026-01-09 19:24:00] 2026-01-09 18:23:07,264 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-01-09 19:24:00] 2026-01-09 18:23:07,289 | INFO     | sufficient remaining disk space (497970839552 B)
[2026-01-09 19:24:00] 2026-01-09 18:23:07,289 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 19:24:00] 2026-01-09 18:23:07,289 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 19:24:00] 2026-01-09 18:23:07,289 | INFO     | update_server=False
[2026-01-09 19:24:00] 2026-01-09 18:23:07,290 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 19:24:00] 2026-01-09 18:23:07,290 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 19:24:00] 2026-01-09 18:23:07,350 | INFO     | all job control threads have been joined
[2026-01-09 19:24:00] 2026-01-09 18:23:07,388 | INFO     | all data control threads have been joined
[2026-01-09 19:24:00] 2026-01-09 18:23:07,600 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 19:24:00] 2026-01-09 18:23:07,600 | INFO     | aborting loop
[2026-01-09 19:24:00] 2026-01-09 18:23:08,155 | INFO     | all payload control threads have been joined
[2026-01-09 19:24:00] 2026-01-09 18:23:08,295 | INFO     | [job] retrieve thread has finished
[2026-01-09 19:24:00] 2026-01-09 18:23:08,296 | INFO     | [job] queue monitor thread has finished
[2026-01-09 19:24:00] 2026-01-09 18:23:08,356 | INFO     | [job] control thread has finished
[2026-01-09 19:24:00] 2026-01-09 18:23:08,394 | INFO     | [data] control thread has finished
[2026-01-09 19:24:00] 2026-01-09 18:23:08,516 | INFO     | [data] copytool_in thread has finished
[2026-01-09 19:24:00] 2026-01-09 18:23:08,598 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 19:24:00] 2026-01-09 18:23:08,606 | INFO     | [job] job monitor thread has finished
[2026-01-09 19:24:00] 2026-01-09 18:23:08,646 | INFO     | [job] validate thread has finished
[2026-01-09 19:24:00] 2026-01-09 18:23:08,704 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 19:24:00] 2026-01-09 18:23:08,705 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 19:24:00] 2026-01-09 18:23:09,086 | INFO     | [payload] validate_post thread has finished
[2026-01-09 19:24:00] 2026-01-09 18:23:09,161 | INFO     | [payload] control thread has finished
[2026-01-09 19:24:00] 2026-01-09 18:23:09,632 | INFO     | [payload] failed_post thread has finished
[2026-01-09 19:24:00] 2026-01-09 18:23:09,777 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 19:24:00] 2026-01-09 18:23:09,778 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 19:24:00] 2026-01-09 18:23:10,604 | INFO     | [data] copytool_out thread has finished
[2026-01-09 19:24:00] 2026-01-09 18:23:12,713 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 19:24:00] 2026-01-09 18:23:18,143 | INFO     | job.realtimelogging is not enabled
[2026-01-09 19:24:00] 2026-01-09 18:23:19,148 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 19:24:00] 2026-01-09 18:23:37,176 | INFO     | PID=2153 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 19:24:00] 2026-01-09 18:23:37,176 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 19:24:00] 2026-01-09 18:23:37,177 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 19:24:00] 2026-01-09 18:23:37,177 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 19:24:00] 2026-01-09 18:23:54,177 | INFO     | [monitor] cgroup control has ended
[2026-01-09 19:24:00] 2026-01-09 18:23:55,494 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140664775644992)>', '<ExcThread(monitor, started 140664163510016)>']
[2026-01-09 19:24:00] 2026-01-09 18:23:56,272 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 19:24:00] 2026-01-09 18:23:56,272 | INFO     | [monitor] control thread has ended
[2026-01-09 19:24:00] 2026-01-09 18:24:00,520 | INFO     | all workflow threads have been joined
[2026-01-09 19:24:00] 2026-01-09 18:24:00,520 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 19:24:00] 2026-01-09 18:24:00,521 | INFO     | traces error code: 0
[2026-01-09 19:24:00] 2026-01-09 18:24:00,521 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 19:24:00] 2026-01-09 18:24:00,677 [wrapper] ==== pilot stdout END ====
[2026-01-09 19:24:00] 2026-01-09 18:24:00,688 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 19:24:00] 2026-01-09 18:24:00,697 [wrapper] pilotpid: 2153
[2026-01-09 19:24:00] 2026-01-09 18:24:00,707 [wrapper] Pilot exit status: 0
[2026-01-09 19:24:00] 2026-01-09 18:24:00,744 [wrapper] pandaids: 6963162682
[2026-01-09 19:24:00] 2026-01-09 18:24:00,794 [wrapper] cleanup supervisor_pilot 27801 2154
[2026-01-09 19:24:00] 2026-01-09 18:24:00,802 [wrapper] Test setup, not cleaning
[2026-01-09 19:24:00] 2026-01-09 18:24:00,807 [wrapper] apfmon messages muted
[2026-01-09 19:24:00] 2026-01-09 18:24:00,814 [wrapper] ==== wrapper stdout END ====
[2026-01-09 19:24:00] 2026-01-09 18:24:00,818 [wrapper] ==== wrapper stderr END ====
[2026-01-09 19:24:00]  *** Error codes and diagnostics ***
[2026-01-09 19:24:00]     "exeErrorCode": 0,
[2026-01-09 19:24:00]     "exeErrorDiag": "",
[2026-01-09 19:24:00]     "pilotErrorCode": 0,
[2026-01-09 19:24:00]     "pilotErrorDiag": "",
[2026-01-09 19:24:00]  *** Listing of results directory ***
[2026-01-09 19:24:00] total 437168
[2026-01-09 19:24:00] -rw-r--r--. 1 boinc boinc    579449 Jan  9 01:55 pilot3.tar.gz
[2026-01-09 19:24:00] -rwx------. 1 boinc boinc     36322 Jan  9 01:56 runpilot2-wrapper.sh
[2026-01-09 19:24:00] -rw-r--r--. 1 boinc boinc      5112 Jan  9 01:56 queuedata.json
[2026-01-09 19:24:00] -rw-r--r--. 1 boinc boinc       100 Jan  9 16:36 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 19:24:00] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 16:36 run_atlas
[2026-01-09 19:24:00] -rw-r--r--. 1 boinc boinc       105 Jan  9 16:36 job.xml
[2026-01-09 19:24:00] -rw-r--r--. 1 boinc boinc      6390 Jan  9 16:36 init_data.xml
[2026-01-09 19:24:00] -rw-r--r--. 2 boinc boinc 222798720 Jan  9 16:36 EVNT.47898824._001305.pool.root.1
[2026-01-09 19:24:00] -rw-r--r--. 2 boinc boinc     15847 Jan  9 16:36 start_atlas.sh
[2026-01-09 19:24:00] drwxrwx--x. 2 boinc boinc        68 Jan  9 16:36 shared
[2026-01-09 19:24:00] -rw-r--r--. 2 boinc boinc    592390 Jan  9 16:36 input.tar.gz
[2026-01-09 19:24:00] -rw-r--r--. 1 boinc boinc         0 Jan  9 16:36 boinc_lockfile
[2026-01-09 19:24:00] -rw-r--r--. 1 boinc boinc      2520 Jan  9 16:36 pandaJob.out
[2026-01-09 19:24:00] -rw-------. 1 boinc boinc    989377 Jan  9 16:36 agis_schedconf.cvmfs.json
[2026-01-09 19:24:00] -rw-------. 1 boinc boinc   1516240 Jan  9 16:36 agis_ddmendpoints.agis.ALL.json
[2026-01-09 19:24:00] drwx------. 5 boinc boinc      4096 Jan  9 16:36 pilot3
[2026-01-09 19:24:00] -rw-------. 1 boinc boinc 217480597 Jan  9 19:22 HITS.47898826._034238.pool.root.1
[2026-01-09 19:24:00] -rw-r--r--. 1 boinc boinc       530 Jan  9 19:22 boinc_task_state.xml
[2026-01-09 19:24:00] -rw-------. 1 boinc boinc        95 Jan  9 19:22 pilot_heartbeat.json
[2026-01-09 19:24:00] -rw-------. 1 boinc boinc      1013 Jan  9 19:22 memory_monitor_summary.json
[2026-01-09 19:24:00] -rw-------. 1 boinc boinc    398315 Jan  9 19:22 log.47898826._034238.job.log.tgz.1
[2026-01-09 19:24:00] -rw-------. 1 boinc boinc      7764 Jan  9 19:23 heartbeat.json
[2026-01-09 19:24:00] -rw-r--r--. 1 boinc boinc      8192 Jan  9 19:23 boinc_mmap_file
[2026-01-09 19:24:00] -rw-r--r--. 1 boinc boinc        28 Jan  9 19:23 wrapper_checkpoint.txt
[2026-01-09 19:24:00] -rw-------. 1 boinc boinc      4880 Jan  9 19:24 pilotlog.txt
[2026-01-09 19:24:00] -rw-------. 1 boinc boinc   1340753 Jan  9 19:24 log.47898826._034238.job.log.1
[2026-01-09 19:24:00] -rw-------. 1 boinc boinc       357 Jan  9 19:24 output.list
[2026-01-09 19:24:00] -rw-r--r--. 1 boinc boinc       620 Jan  9 19:24 runtime_log
[2026-01-09 19:24:00] -rw-------. 1 boinc boinc   1761280 Jan  9 19:24 result.tar.gz
[2026-01-09 19:24:00] -rw-r--r--. 1 boinc boinc      8817 Jan  9 19:24 runtime_log.err
[2026-01-09 19:24:00] -rw-------. 1 boinc boinc       655 Jan  9 19:24 H62KDmqyFy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm1SgKDmO9v3pm.diag
[2026-01-09 19:24:00] -rw-r--r--. 1 boinc boinc     20931 Jan  9 19:24 stderr.txt
[2026-01-09 19:24:00] HITS file was successfully produced:
[2026-01-09 19:24:01] -rw-------. 1 boinc boinc 217480597 Jan  9 19:22 shared/HITS.pool.root.1
[2026-01-09 19:24:01]  *** Contents of shared directory: ***
[2026-01-09 19:24:01] total 432280
[2026-01-09 19:24:01] -rw-r--r--. 2 boinc boinc 222798720 Jan  9 16:36 ATLAS.root_0
[2026-01-09 19:24:01] -rw-r--r--. 2 boinc boinc     15847 Jan  9 16:36 start_atlas.sh
[2026-01-09 19:24:01] -rw-r--r--. 2 boinc boinc    592390 Jan  9 16:36 input.tar.gz
[2026-01-09 19:24:01] -rw-------. 1 boinc boinc 217480597 Jan  9 19:22 HITS.pool.root.1
[2026-01-09 19:24:01] -rw-------. 1 boinc boinc   1761280 Jan  9 19:24 result.tar.gz
19:24:02 (30832): run_atlas exited; CPU time 74157.082017
19:24:02 (30832): called boinc_finish(0)

</stderr_txt>
]]>

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