Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:21:15 (6069): wrapper (7.7.26015): starting
17:21:15 (6069): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 17:21:15] Arguments: --nthreads 8
[2026-01-09 17:21:15] Threads: 8
[2026-01-09 17:21:15] Checking for CVMFS
[2026-01-09 17:21:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 17:21:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 17:21:15] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 17:21:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 17:21:16] 2.11.2.0 1035 35649 95872 154950 3 56 17213319 25165825 0 130560 0 14568445 99.816 10077892 4246 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 17:21:16] CVMFS is ok
[2026-01-09 17:21:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 17:21:16] Checking for apptainer binary...
[2026-01-09 17:21:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 17:21:16] Running /usr/bin/apptainer --version
[2026-01-09 17:21:16] apptainer version 1.3.2-1.el7
[2026-01-09 17:21:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 17:21:17] cg-vwn358.simple-grid.lan
[2026-01-09 17:21:17] apptainer works
[2026-01-09 17:21:17] Set ATHENA_PROC_NUMBER=8
[2026-01-09 17:21:17] Set ATHENA_CORE_NUMBER=8
[2026-01-09 17:21:17] Starting ATLAS job with PandaID=6963162718
[2026-01-09 17:21:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 20:10:53]  *** The last 200 lines of the pilot log: ***
[2026-01-09 20:10:53] 2026-01-09 19:09:53,066 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 20:10:53] 2026-01-09 19:09:53,683 | INFO     | time since job start (10103s) is within the limit (349056.0s)
[2026-01-09 20:10:53] 2026-01-09 19:09:54,213 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 20:10:53] 2026-01-09 19:09:54,214 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 20:10:53] 2026-01-09 19:09:54,216 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6963162718/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 20:10:53] 2026-01-09 19:09:54,216 | INFO     | extracted standard info from prmon json
[2026-01-09 20:10:53] 2026-01-09 19:09:54,217 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 20:10:53] 2026-01-09 19:09:54,217 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 20:10:53] 2026-01-09 19:09:54,217 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 20:10:53] 2026-01-09 19:09:54,217 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 20:10:53] 2026-01-09 19:09:54,221 | INFO     | fitting pss+swap vs Time
[2026-01-09 20:10:53] 2026-01-09 19:09:54,221 | INFO     | sum of square deviations: 1418361477.5
[2026-01-09 20:10:53] 2026-01-09 19:09:54,223 | INFO     | sum of deviations: -28872327057.0
[2026-01-09 20:10:53] 2026-01-09 19:09:54,223 | INFO     | mean x: 1767980750.5
[2026-01-09 20:10:53] 2026-01-09 19:09:54,223 | INFO     | mean y: 2544404.8433734938
[2026-01-09 20:10:53] 2026-01-09 19:09:54,223 | INFO     | intersect: 35991761024.63578
[2026-01-09 20:10:53] 2026-01-09 19:09:54,223 | INFO     | chi2: 2.636983055874401
[2026-01-09 20:10:53] 2026-01-09 19:09:54,224 | INFO     | sum of square deviations: 1294014960.0
[2026-01-09 20:10:53] 2026-01-09 19:09:54,225 | INFO     | sum of deviations: -15112682045.99999
[2026-01-09 20:10:53] 2026-01-09 19:09:54,225 | INFO     | mean x: 1767980598.0
[2026-01-09 20:10:53] 2026-01-09 19:09:54,225 | INFO     | mean y: 2560908.534161491
[2026-01-09 20:10:53] 2026-01-09 19:09:54,225 | INFO     | intersect: 20650644174.179657
[2026-01-09 20:10:53] 2026-01-09 19:09:54,226 | INFO     | chi2: 1.647694045572782
[2026-01-09 20:10:53] 2026-01-09 19:09:54,226 | INFO     | current chi2=1.647694045572782 (change=37.51594110920744 %)
[2026-01-09 20:10:53] 2026-01-09 19:09:54,226 | INFO     | sum of square deviations: 1177156955.0
[2026-01-09 20:10:53] 2026-01-09 19:09:54,227 | INFO     | sum of deviations: -14042474012.0
[2026-01-09 20:10:53] 2026-01-09 19:09:54,227 | INFO     | mean x: 1767980445.5
[2026-01-09 20:10:53] 2026-01-09 19:09:54,227 | INFO     | mean y: 2562305.6153846155
[2026-01-09 20:10:53] 2026-01-09 19:09:54,228 | INFO     | intersect: 21093054405.42032
[2026-01-09 20:10:53] 2026-01-09 19:09:54,228 | INFO     | chi2: 1.6466476404942243
[2026-01-09 20:10:53] 2026-01-09 19:09:54,228 | INFO     | current chi2=1.6466476404942243 (change=0.06350724404019621 %)
[2026-01-09 20:10:53] 2026-01-09 19:09:54,228 | INFO     | right removable region: 155
[2026-01-09 20:10:53] 2026-01-09 19:09:54,229 | INFO     | sum of square deviations: 1294014960.0
[2026-01-09 20:10:53] 2026-01-09 19:09:54,230 | INFO     | sum of deviations: -53889415196.00001
[2026-01-09 20:10:53] 2026-01-09 19:09:54,230 | INFO     | mean x: 1767980903.0
[2026-01-09 20:10:53] 2026-01-09 19:09:54,230 | INFO     | mean y: 2574660.9875776395
[2026-01-09 20:10:53] 2026-01-09 19:09:54,230 | INFO     | intersect: 73630360958.26965
[2026-01-09 20:10:53] 2026-01-09 19:09:54,230 | INFO     | chi2: 1.1968914207721175
[2026-01-09 20:10:53] 2026-01-09 19:09:54,231 | INFO     | current chi2=1.1968914207721175 (change=54.611334414690106 %)
[2026-01-09 20:10:53] 2026-01-09 19:09:54,231 | INFO     | sum of square deviations: 1177156955.0
[2026-01-09 20:10:53] 2026-01-09 19:09:54,232 | INFO     | sum of deviations: -51791837811.50001
[2026-01-09 20:10:53] 2026-01-09 19:09:54,232 | INFO     | mean x: 1767981055.5
[2026-01-09 20:10:53] 2026-01-09 19:09:54,232 | INFO     | mean y: 2571868.1474358975
[2026-01-09 20:10:53] 2026-01-09 19:09:54,232 | INFO     | intersect: 77789130144.27858
[2026-01-09 20:10:53] 2026-01-09 19:09:54,233 | INFO     | chi2: 1.1839162938474515
[2026-01-09 20:10:53] 2026-01-09 19:09:54,233 | INFO     | current chi2=1.1839162938474515 (change=1.0840688386166042 %)
[2026-01-09 20:10:53] 2026-01-09 19:09:54,233 | INFO     | left removable region: 20
[2026-01-09 20:10:53] 2026-01-09 19:09:54,233 | INFO     | sum of square deviations: 762879420.0
[2026-01-09 20:10:53] 2026-01-09 19:09:54,234 | INFO     | sum of deviations: -28546878514.999996
[2026-01-09 20:10:53] 2026-01-09 19:09:54,234 | INFO     | mean x: 1767981025.0
[2026-01-09 20:10:53] 2026-01-09 19:09:54,234 | INFO     | mean y: 2580593.725925926
[2026-01-09 20:10:53] 2026-01-09 19:09:54,235 | INFO     | intersect: 66160269757.10665
[2026-01-09 20:10:53] 2026-01-09 19:09:54,235 | INFO     | chi2: 0.14099265839848144
[2026-01-09 20:10:53] 2026-01-09 19:09:54,235 | INFO     | current memory leak: -37.42 B/s (using 135 data points, chi2=0.14)
[2026-01-09 20:10:53] 2026-01-09 19:09:54,236 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-01-09 20:10:53] 2026-01-09 19:09:54,236 | INFO     | ..............................
[2026-01-09 20:10:53] 2026-01-09 19:09:54,236 | INFO     | . Timing measurements:
[2026-01-09 20:10:53] 2026-01-09 19:09:54,236 | INFO     | . get job = 0 s
[2026-01-09 20:10:53] 2026-01-09 19:09:54,236 | INFO     | . initial setup = 1 s
[2026-01-09 20:10:53] 2026-01-09 19:09:54,236 | INFO     | . payload setup = 6 s
[2026-01-09 20:10:53] 2026-01-09 19:09:54,236 | INFO     | . stage-in = 0 s
[2026-01-09 20:10:53] 2026-01-09 19:09:54,236 | INFO     | . payload execution = 10071 s
[2026-01-09 20:10:53] 2026-01-09 19:09:54,237 | INFO     | . stage-out = 0 s
[2026-01-09 20:10:53] 2026-01-09 19:09:54,237 | INFO     | . log creation = 0 s
[2026-01-09 20:10:53] 2026-01-09 19:09:54,237 | INFO     | ..............................
[2026-01-09 20:10:53] 2026-01-09 19:09:54,350 | INFO     | 
[2026-01-09 20:10:53] 2026-01-09 19:09:54,351 | INFO     | job summary report
[2026-01-09 20:10:53] 2026-01-09 19:09:54,351 | INFO     | --------------------------------------------------
[2026-01-09 20:10:53] 2026-01-09 19:09:54,351 | INFO     | PanDA job id: 6963162718
[2026-01-09 20:10:53] 2026-01-09 19:09:54,351 | INFO     | task id: 47898826
[2026-01-09 20:10:53] 2026-01-09 19:09:54,351 | INFO     | errors: (none)
[2026-01-09 20:10:53] 2026-01-09 19:09:54,351 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 20:10:53] 2026-01-09 19:09:54,351 | INFO     | pilot state: finished 
[2026-01-09 20:10:53] 2026-01-09 19:09:54,351 | INFO     | transexitcode: 0
[2026-01-09 20:10:53] 2026-01-09 19:09:54,352 | INFO     | exeerrorcode: 0
[2026-01-09 20:10:53] 2026-01-09 19:09:54,352 | INFO     | exeerrordiag: 
[2026-01-09 20:10:53] 2026-01-09 19:09:54,352 | INFO     | exitcode: 0
[2026-01-09 20:10:53] 2026-01-09 19:09:54,352 | INFO     | exitmsg: OK
[2026-01-09 20:10:53] 2026-01-09 19:09:54,352 | INFO     | cpuconsumptiontime: 77074 s
[2026-01-09 20:10:53] 2026-01-09 19:09:54,352 | INFO     | nevents: 400
[2026-01-09 20:10:53] 2026-01-09 19:09:54,352 | INFO     | neventsw: 0
[2026-01-09 20:10:53] 2026-01-09 19:09:54,352 | INFO     | pid: 16221
[2026-01-09 20:10:53] 2026-01-09 19:09:54,352 | INFO     | pgrp: 16221
[2026-01-09 20:10:53] 2026-01-09 19:09:54,352 | INFO     | corecount: 8
[2026-01-09 20:10:53] 2026-01-09 19:09:54,353 | INFO     | event service: False
[2026-01-09 20:10:53] 2026-01-09 19:09:54,353 | INFO     | sizes: {0: 2283965, 5: 2284227, 11: 2284283, 10082: 2312679, 10084: 2321733, 10089: 2321935}
[2026-01-09 20:10:53] 2026-01-09 19:09:54,353 | INFO     | --------------------------------------------------
[2026-01-09 20:10:53] 2026-01-09 19:09:54,353 | INFO     | 
[2026-01-09 20:10:53] 2026-01-09 19:09:54,353 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-01-09 20:10:53] 2026-01-09 19:09:54,376 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 20:10:53] 2026-01-09 19:09:54,377 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 20:10:53] 2026-01-09 19:09:54,377 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 20:10:53] 2026-01-09 19:09:54,377 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 20:10:53] 2026-01-09 19:09:54,377 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 20:10:53] 2026-01-09 19:09:54,377 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 20:10:53] 2026-01-09 19:09:54,377 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 20:10:53] 2026-01-09 19:09:54,378 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 20:10:53] 2026-01-09 19:09:54,378 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 20:10:53] 2026-01-09 19:09:54,378 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 20:10:53] 2026-01-09 19:09:54,378 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 20:10:53] 2026-01-09 19:09:54,378 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 20:10:53] 2026-01-09 19:09:54,378 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 20:10:53] 2026-01-09 19:09:54,378 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 20:10:53] 2026-01-09 19:09:54,378 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 20:10:53] 2026-01-09 19:09:54,379 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 20:10:53] 2026-01-09 19:09:54,379 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 20:10:53] 2026-01-09 19:09:54,379 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 20:10:53] 2026-01-09 19:09:54,379 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 20:10:53] 2026-01-09 19:09:54,379 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 20:10:53] 2026-01-09 19:09:54,379 | INFO     | job 6963162718 has completed (purged errors)
[2026-01-09 20:10:53] 2026-01-09 19:09:54,379 | INFO     | overall cleanup function is called
[2026-01-09 20:10:53] 2026-01-09 19:09:55,387 | INFO     | --- collectZombieJob: --- 10, [16221]
[2026-01-09 20:10:53] 2026-01-09 19:09:55,388 | INFO     | zombie collector waiting for pid 16221
[2026-01-09 20:10:53] 2026-01-09 19:09:55,388 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 20:10:53] 2026-01-09 19:09:55,388 | INFO     | collected zombie processes
[2026-01-09 20:10:53] 2026-01-09 19:09:55,388 | INFO     | will attempt to kill all subprocesses of pid=16221
[2026-01-09 20:10:53] 2026-01-09 19:09:55,452 | INFO     | process IDs to be killed: [16221] (in reverse order)
[2026-01-09 20:10:53] 2026-01-09 19:09:55,495 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 20:10:53] 2026-01-09 19:09:55,496 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 20:10:53] 2026-01-09 19:09:55,498 | INFO     | did not find any defunct processes belonging to 16221
[2026-01-09 20:10:53] 2026-01-09 19:09:55,499 | INFO     | did not find any defunct processes belonging to 16221
[2026-01-09 20:10:53] 2026-01-09 19:09:55,499 | INFO     | ready for new job
[2026-01-09 20:10:53] 2026-01-09 19:09:55,500 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 20:10:53] 2026-01-09 19:09:55,501 | INFO     | ***************************************
[2026-01-09 20:10:53] 2026-01-09 19:09:55,502 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 20:10:53] 2026-01-09 19:09:55,502 | INFO     | ***************************************
[2026-01-09 20:10:53] 2026-01-09 19:09:55,502 | INFO     | 
[2026-01-09 20:10:53] 2026-01-09 19:09:55,502 | INFO     | pilot is running in a VM
[2026-01-09 20:10:53] 2026-01-09 19:09:55,502 | INFO     | architecture information:
[2026-01-09 20:10:53] 2026-01-09 19:09:55,503 | INFO     | executing command: cat /etc/os-release
[2026-01-09 20:10:53] 2026-01-09 19:09:55,522 | INFO     | cat /etc/os-release:
[2026-01-09 20:10:53] NAME="CentOS Linux"
[2026-01-09 20:10:53] VERSION="7 (Core)"
[2026-01-09 20:10:53] ID="centos"
[2026-01-09 20:10:53] ID_LIKE="rhel fedora"
[2026-01-09 20:10:53] VERSION_ID="7"
[2026-01-09 20:10:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 20:10:53] ANSI_COLOR="0;31"
[2026-01-09 20:10:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 20:10:53] HOME_URL="https://www.centos.org/"
[2026-01-09 20:10:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 20:10:53] 
[2026-01-09 20:10:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 20:10:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 20:10:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 20:10:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 20:10:53] 
[2026-01-09 20:10:53] 2026-01-09 19:09:55,522 | INFO     | ***************************************
[2026-01-09 20:10:53] 2026-01-09 19:09:56,026 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-01-09 20:10:53] 2026-01-09 19:09:56,044 | INFO     | sufficient remaining disk space (497951965184 B)
[2026-01-09 20:10:53] 2026-01-09 19:09:56,045 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 20:10:53] 2026-01-09 19:09:56,045 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 20:10:53] 2026-01-09 19:09:56,045 | INFO     | update_server=False
[2026-01-09 20:10:53] 2026-01-09 19:09:56,045 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 20:10:53] 2026-01-09 19:09:56,046 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 20:10:53] 2026-01-09 19:09:56,046 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 20:10:53] 2026-01-09 19:09:56,360 | INFO     | all data control threads have been joined
[2026-01-09 20:10:53] 2026-01-09 19:09:56,574 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 20:10:53] 2026-01-09 19:09:56,575 | INFO     | aborting loop
[2026-01-09 20:10:53] 2026-01-09 19:09:56,723 | INFO     | all payload control threads have been joined
[2026-01-09 20:10:53] 2026-01-09 19:09:57,051 | INFO     | [job] retrieve thread has finished
[2026-01-09 20:10:53] 2026-01-09 19:09:57,052 | INFO     | [job] queue monitor thread has finished
[2026-01-09 20:10:53] 2026-01-09 19:09:57,109 | INFO     | [job] validate thread has finished
[2026-01-09 20:10:53] 2026-01-09 19:09:57,140 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 20:10:53] 2026-01-09 19:09:57,181 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 20:10:53] 2026-01-09 19:09:57,183 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 20:10:53] 2026-01-09 19:09:57,271 | INFO     | [payload] failed_post thread has finished
[2026-01-09 20:10:53] 2026-01-09 19:09:57,366 | INFO     | [data] control thread has finished
[2026-01-09 20:10:53] 2026-01-09 19:09:57,580 | INFO     | [job] job monitor thread has finished
[2026-01-09 20:10:53] 2026-01-09 19:09:57,628 | INFO     | all job control threads have been joined
[2026-01-09 20:10:53] 2026-01-09 19:09:57,641 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 20:10:53] 2026-01-09 19:09:57,728 | INFO     | [payload] control thread has finished
[2026-01-09 20:10:53] 2026-01-09 19:09:57,893 | INFO     | [payload] validate_post thread has finished
[2026-01-09 20:10:53] 2026-01-09 19:09:58,093 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 20:10:53] 2026-01-09 19:09:58,147 | INFO     | [data] copytool_in thread has finished
[2026-01-09 20:10:53] 2026-01-09 19:09:58,634 | INFO     | [job] control thread has finished
[2026-01-09 20:10:53] 2026-01-09 19:09:59,187 | INFO     | [data] copytool_out thread has finished
[2026-01-09 20:10:53] 2026-01-09 19:10:00,053 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 20:10:53] 2026-01-09 19:10:26,774 | INFO     | PID=9797 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 20:10:53] 2026-01-09 19:10:26,774 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 20:10:53] 2026-01-09 19:10:26,774 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 20:10:53] 2026-01-09 19:10:26,774 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 20:10:53] 2026-01-09 19:10:46,495 | INFO     | [monitor] cgroup control has ended
[2026-01-09 20:10:53] 2026-01-09 19:10:48,146 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139930043963200)>', '<ExcThread(monitor, started 139929606670080)>']
[2026-01-09 20:10:53] 2026-01-09 19:10:48,896 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 20:10:53] 2026-01-09 19:10:48,896 | INFO     | [monitor] control thread has ended
[2026-01-09 20:10:53] 2026-01-09 19:10:53,155 | INFO     | all workflow threads have been joined
[2026-01-09 20:10:53] 2026-01-09 19:10:53,155 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 20:10:53] 2026-01-09 19:10:53,155 | INFO     | traces error code: 0
[2026-01-09 20:10:53] 2026-01-09 19:10:53,156 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 20:10:53] 2026-01-09 19:10:53,309 [wrapper] ==== pilot stdout END ====
[2026-01-09 20:10:53] 2026-01-09 19:10:53,314 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 20:10:53] 2026-01-09 19:10:53,317 [wrapper] pilotpid: 9797
[2026-01-09 20:10:53] 2026-01-09 19:10:53,321 [wrapper] Pilot exit status: 0
[2026-01-09 20:10:53] 2026-01-09 19:10:53,336 [wrapper] pandaids: 6963162718
[2026-01-09 20:10:53] 2026-01-09 19:10:53,372 [wrapper] cleanup supervisor_pilot  1567 9798
[2026-01-09 20:10:53] 2026-01-09 19:10:53,376 [wrapper] Test setup, not cleaning
[2026-01-09 20:10:53] 2026-01-09 19:10:53,381 [wrapper] apfmon messages muted
[2026-01-09 20:10:53] 2026-01-09 19:10:53,385 [wrapper] ==== wrapper stdout END ====
[2026-01-09 20:10:53] 2026-01-09 19:10:53,388 [wrapper] ==== wrapper stderr END ====
[2026-01-09 20:10:53]  *** Error codes and diagnostics ***
[2026-01-09 20:10:53]     "exeErrorCode": 0,
[2026-01-09 20:10:53]     "exeErrorDiag": "",
[2026-01-09 20:10:53]     "pilotErrorCode": 0,
[2026-01-09 20:10:53]     "pilotErrorDiag": "",
[2026-01-09 20:10:53]  *** Listing of results directory ***
[2026-01-09 20:10:53] total 442436
[2026-01-09 20:10:53] -rw-r--r--. 1 boinc boinc    579449 Jan  9 01:55 pilot3.tar.gz
[2026-01-09 20:10:53] -rwx------. 1 boinc boinc     36322 Jan  9 01:55 runpilot2-wrapper.sh
[2026-01-09 20:10:53] -rw-r--r--. 1 boinc boinc      5112 Jan  9 01:55 queuedata.json
[2026-01-09 20:10:53] -rw-r--r--. 1 boinc boinc       100 Jan  9 17:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 20:10:53] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 17:21 run_atlas
[2026-01-09 20:10:53] -rw-r--r--. 1 boinc boinc       105 Jan  9 17:21 job.xml
[2026-01-09 20:10:53] -rw-r--r--. 1 boinc boinc      6390 Jan  9 17:21 init_data.xml
[2026-01-09 20:10:53] -rw-r--r--. 2 boinc boinc 224003722 Jan  9 17:21 EVNT.47898824._001307.pool.root.1
[2026-01-09 20:10:53] -rw-r--r--. 2 boinc boinc     15847 Jan  9 17:21 start_atlas.sh
[2026-01-09 20:10:53] drwxrwx--x. 2 boinc boinc        68 Jan  9 17:21 shared
[2026-01-09 20:10:53] -rw-r--r--. 2 boinc boinc    592392 Jan  9 17:21 input.tar.gz
[2026-01-09 20:10:53] -rw-r--r--. 1 boinc boinc         0 Jan  9 17:21 boinc_lockfile
[2026-01-09 20:10:53] -rw-r--r--. 1 boinc boinc      2517 Jan  9 17:21 pandaJob.out
[2026-01-09 20:10:53] -rw-------. 1 boinc boinc    989356 Jan  9 17:21 agis_schedconf.cvmfs.json
[2026-01-09 20:10:53] -rw-------. 1 boinc boinc   1516240 Jan  9 17:21 agis_ddmendpoints.agis.ALL.json
[2026-01-09 20:10:53] drwx------. 5 boinc boinc      4096 Jan  9 17:21 pilot3
[2026-01-09 20:10:53] -rw-------. 1 boinc boinc 221680044 Jan  9 20:09 HITS.47898826._034274.pool.root.1
[2026-01-09 20:10:53] -rw-r--r--. 1 boinc boinc       531 Jan  9 20:09 boinc_task_state.xml
[2026-01-09 20:10:53] -rw-------. 1 boinc boinc        95 Jan  9 20:09 pilot_heartbeat.json
[2026-01-09 20:10:53] -rw-------. 1 boinc boinc      1010 Jan  9 20:09 memory_monitor_summary.json
[2026-01-09 20:10:53] -rw-------. 1 boinc boinc    382207 Jan  9 20:09 log.47898826._034274.job.log.tgz.1
[2026-01-09 20:10:53] -rw-------. 1 boinc boinc      7772 Jan  9 20:09 heartbeat.json
[2026-01-09 20:10:53] -rw-r--r--. 1 boinc boinc        28 Jan  9 20:10 wrapper_checkpoint.txt
[2026-01-09 20:10:53] -rw-r--r--. 1 boinc boinc      8192 Jan  9 20:10 boinc_mmap_file
[2026-01-09 20:10:53] -rw-------. 1 boinc boinc      4808 Jan  9 20:10 pilotlog.txt
[2026-01-09 20:10:53] -rw-------. 1 boinc boinc   1354476 Jan  9 20:10 log.47898826._034274.job.log.1
[2026-01-09 20:10:53] -rw-------. 1 boinc boinc       357 Jan  9 20:10 output.list
[2026-01-09 20:10:53] -rw-r--r--. 1 boinc boinc       620 Jan  9 20:10 runtime_log
[2026-01-09 20:10:53] -rw-------. 1 boinc boinc   1751040 Jan  9 20:10 result.tar.gz
[2026-01-09 20:10:53] -rw-r--r--. 1 boinc boinc      8817 Jan  9 20:10 runtime_log.err
[2026-01-09 20:10:53] -rw-------. 1 boinc boinc       655 Jan  9 20:10 9jKMDmhxFy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmvglKDmMlUKbm.diag
[2026-01-09 20:10:53] -rw-r--r--. 1 boinc boinc     20736 Jan  9 20:10 stderr.txt
[2026-01-09 20:10:53] HITS file was successfully produced:
[2026-01-09 20:10:53] -rw-------. 1 boinc boinc 221680044 Jan  9 20:09 shared/HITS.pool.root.1
[2026-01-09 20:10:53]  *** Contents of shared directory: ***
[2026-01-09 20:10:53] total 437552
[2026-01-09 20:10:53] -rw-r--r--. 2 boinc boinc 224003722 Jan  9 17:21 ATLAS.root_0
[2026-01-09 20:10:53] -rw-r--r--. 2 boinc boinc     15847 Jan  9 17:21 start_atlas.sh
[2026-01-09 20:10:53] -rw-r--r--. 2 boinc boinc    592392 Jan  9 17:21 input.tar.gz
[2026-01-09 20:10:53] -rw-------. 1 boinc boinc 221680044 Jan  9 20:09 HITS.pool.root.1
[2026-01-09 20:10:53] -rw-------. 1 boinc boinc   1751040 Jan  9 20:10 result.tar.gz
20:10:54 (6069): run_atlas exited; CPU time 77144.674329
20:10:54 (6069): called boinc_finish(0)

</stderr_txt>
]]>

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