Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:53:52 (4098071): wrapper (7.7.26015): starting
08:53:52 (4098071): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 08:53:52] Arguments: --nthreads 12
[2026-01-09 08:53:52] Threads: 12
[2026-01-09 08:53:52] Checking for CVMFS
[2026-01-09 08:53:55] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 08:53:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 08:53:56] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 08:53:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 08:53:57] 2.8.1.0 4098360 0 30188 154945 3 1 2072725 4096001 0 130560 0 0 0.000 1336 726 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-09 08:53:57] CVMFS is ok
[2026-01-09 08:53:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 08:53:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 08:53:57] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-09 08:53:57] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-09 08:53:57] Further information can be found at the LHC@home message board.
[2026-01-09 08:53:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 08:53:57] Checking for apptainer binary...
[2026-01-09 08:53:57] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2026-01-09 08:53:57] apptainer is not installed, using version from CVMFS
[2026-01-09 08:53:57] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 08:53:57] farmville.blisteringsheep.pec
[2026-01-09 08:53:57] apptainer works
[2026-01-09 08:53:57] Set ATHENA_PROC_NUMBER=12
[2026-01-09 08:53:57] Set ATHENA_CORE_NUMBER=12
[2026-01-09 08:53:57] Starting ATLAS job with PandaID=6963148846
[2026-01-09 08:53:57] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/36 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 10:02:23]  *** The last 200 lines of the pilot log: ***
[2026-01-09 10:02:23]  status_code=0
[2026-01-09 10:02:23]  storage_token=
[2026-01-09 10:02:23]  surl=/var/lib/boinc/slots/36/PanDA_Pilot-6963148846/log.47898826._028194.job.log.tgz.1
[2026-01-09 10:02:23]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f7/8a/log.47898826._028194.job.log.tgz.1
[2026-01-09 10:02:23]  workdir=None
[2026-01-09 10:02:23] ]
[2026-01-09 10:02:23] 2026-01-09 15:01:20,842 | INFO     | transferring file log.47898826._028194.job.log.tgz.1 from /var/lib/boinc/slots/36/PanDA_Pilot-6963148846/log.47898826._028194.job.log.tgz.1 to /var/lib/boinc/slots
[2026-01-09 10:02:23] 2026-01-09 15:01:20,842 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/36/PanDA_Pilot-6963148846/log.47898826._028194.job.log.tgz.1 /var/lib/boinc/slots/36/log.47898826._028194.j
[2026-01-09 10:02:23] 2026-01-09 15:01:20,855 | INFO     | adding to output.list: log.47898826._028194.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f7/8a/log.47898826._028194.job.log.tg
[2026-01-09 10:02:23] 2026-01-09 15:01:20,856 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-09 10:02:23] 2026-01-09 15:01:20,856 | INFO     | summary of transferred files:
[2026-01-09 10:02:23] 2026-01-09 15:01:20,856 | INFO     |  -- lfn=log.47898826._028194.job.log.tgz.1, status_code=0, status=transferred
[2026-01-09 10:02:23] 2026-01-09 15:01:20,856 | INFO     | stage-out finished correctly
[2026-01-09 10:02:23] 2026-01-09 15:01:21,235 | INFO     | time since job start (4030s) is within the limit (349056.0s)
[2026-01-09 10:02:23] 2026-01-09 15:01:22,768 | INFO     | monitor loop #304: job 0:6963148846 is in state 'finished'
[2026-01-09 10:02:23] 2026-01-09 15:01:22,768 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 10:02:23] 2026-01-09 15:01:23,241 | INFO     | time since job start (4032s) is within the limit (349056.0s)
[2026-01-09 10:02:23] 2026-01-09 15:01:23,925 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-09 10:02:23] 2026-01-09 15:01:23,973 | INFO     | job 6963148846 has state=finished
[2026-01-09 10:02:23] 2026-01-09 15:01:23,973 | INFO     | preparing for final server update for job 6963148846 in state='finished'
[2026-01-09 10:02:23] 2026-01-09 15:01:23,974 | INFO     | this job has now completed (state=finished)
[2026-01-09 10:02:23] 2026-01-09 15:01:23,974 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-09 10:02:23] 2026-01-09 15:01:23,974 | INFO     | log transfer has been attempted: DONE
[2026-01-09 10:02:23] 2026-01-09 15:01:23,974 | INFO     | job 6963148846 has finished - writing final server update
[2026-01-09 10:02:23] 2026-01-09 15:01:23,974 | INFO     | total number of processed events: 400 (read)
[2026-01-09 10:02:23] 2026-01-09 15:01:23,975 | INFO     | executing command: lscpu
[2026-01-09 10:02:23] 2026-01-09 15:01:23,999 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 10:02:23] 2026-01-09 15:01:25,246 | INFO     | time since job start (4034s) is within the limit (349056.0s)
[2026-01-09 10:02:23] 2026-01-09 15:01:25,271 | INFO     | monitor loop #305: job 0:6963148846 is in state 'finished'
[2026-01-09 10:02:23] 2026-01-09 15:01:25,271 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 10:02:23] 2026-01-09 15:01:27,251 | INFO     | time since job start (4036s) is within the limit (349056.0s)
[2026-01-09 10:02:23] 2026-01-09 15:01:27,774 | INFO     | monitor loop #306: job 0:6963148846 is in state 'finished'
[2026-01-09 10:02:23] 2026-01-09 15:01:27,774 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 10:02:23] 2026-01-09 15:01:29,256 | INFO     | time since job start (4038s) is within the limit (349056.0s)
[2026-01-09 10:02:23] 2026-01-09 15:01:30,277 | INFO     | monitor loop #307: job 0:6963148846 is in state 'finished'
[2026-01-09 10:02:23] 2026-01-09 15:01:30,278 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 10:02:23] 2026-01-09 15:01:30,530 | INFO     | PID=4102797 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 10:02:23] 2026-01-09 15:01:30,581 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 10:02:23] 2026-01-09 15:01:30,585 | INFO     | found 24 cores (12 cores per socket, 2 sockets) HT, CPU MHz: 2774.8695000000002
[2026-01-09 10:02:23] 2026-01-09 15:01:30,592 | INFO     | using path: /var/lib/boinc/slots/36/PanDA_Pilot-6963148846/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 10:02:23] 2026-01-09 15:01:30,593 | INFO     | extracted standard info from prmon json
[2026-01-09 10:02:23] 2026-01-09 15:01:30,593 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 10:02:23] 2026-01-09 15:01:30,593 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 10:02:23] 2026-01-09 15:01:30,593 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 10:02:23] 2026-01-09 15:01:30,593 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 10:02:23] 2026-01-09 15:01:30,595 | INFO     | fitting pss+swap vs Time
[2026-01-09 10:02:23] 2026-01-09 15:01:30,595 | INFO     | sum of square deviations: 63666310.0
[2026-01-09 10:02:23] 2026-01-09 15:01:30,595 | INFO     | sum of deviations: -6421123093.000001
[2026-01-09 10:02:23] 2026-01-09 15:01:30,596 | INFO     | mean x: 1767968946.0
[2026-01-09 10:02:23] 2026-01-09 15:01:30,596 | INFO     | mean y: 2852755.338983051
[2026-01-09 10:02:23] 2026-01-09 15:01:30,596 | INFO     | intersect: 178312954705.13742
[2026-01-09 10:02:23] 2026-01-09 15:01:30,596 | INFO     | chi2: 0.04221379901681636
[2026-01-09 10:02:23] 2026-01-09 15:01:30,596 | INFO     | current memory leak: -100.86 B/s (using 59 data points, chi2=0.04)
[2026-01-09 10:02:23] 2026-01-09 15:01:30,596 | INFO     | could have reported an average CPU frequency of 2906 MHz (6 samples)
[2026-01-09 10:02:23] 2026-01-09 15:01:30,597 | INFO     | ..............................
[2026-01-09 10:02:23] 2026-01-09 15:01:30,597 | INFO     | . Timing measurements:
[2026-01-09 10:02:23] 2026-01-09 15:01:30,597 | INFO     | . get job = 0 s
[2026-01-09 10:02:23] 2026-01-09 15:01:30,597 | INFO     | . initial setup = 2 s
[2026-01-09 10:02:23] 2026-01-09 15:01:30,597 | INFO     | . payload setup = 3 s
[2026-01-09 10:02:23] 2026-01-09 15:01:30,597 | INFO     | . stage-in = 0 s
[2026-01-09 10:02:23] 2026-01-09 15:01:30,597 | INFO     | . payload execution = 4006 s
[2026-01-09 10:02:23] 2026-01-09 15:01:30,597 | INFO     | . stage-out = 1 s
[2026-01-09 10:02:23] 2026-01-09 15:01:30,597 | INFO     | . log creation = 0 s
[2026-01-09 10:02:23] 2026-01-09 15:01:30,597 | INFO     | ..............................
[2026-01-09 10:02:23] 2026-01-09 15:01:30,668 | INFO     | 
[2026-01-09 10:02:23] 2026-01-09 15:01:30,668 | INFO     | job summary report
[2026-01-09 10:02:23] 2026-01-09 15:01:30,668 | INFO     | --------------------------------------------------
[2026-01-09 10:02:23] 2026-01-09 15:01:30,668 | INFO     | PanDA job id: 6963148846
[2026-01-09 10:02:23] 2026-01-09 15:01:30,668 | INFO     | task id: 47898826
[2026-01-09 10:02:23] 2026-01-09 15:01:30,668 | INFO     | errors: (none)
[2026-01-09 10:02:23] 2026-01-09 15:01:30,668 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 10:02:23] 2026-01-09 15:01:30,669 | INFO     | pilot state: finished 
[2026-01-09 10:02:23] 2026-01-09 15:01:30,669 | INFO     | transexitcode: 0
[2026-01-09 10:02:23] 2026-01-09 15:01:30,669 | INFO     | exeerrorcode: 0
[2026-01-09 10:02:23] 2026-01-09 15:01:30,669 | INFO     | exeerrordiag: 
[2026-01-09 10:02:23] 2026-01-09 15:01:30,669 | INFO     | exitcode: 0
[2026-01-09 10:02:23] 2026-01-09 15:01:30,669 | INFO     | exitmsg: OK
[2026-01-09 10:02:23] 2026-01-09 15:01:30,669 | INFO     | cpuconsumptiontime: 44394 s
[2026-01-09 10:02:23] 2026-01-09 15:01:30,669 | INFO     | nevents: 400
[2026-01-09 10:02:23] 2026-01-09 15:01:30,669 | INFO     | neventsw: 0
[2026-01-09 10:02:23] 2026-01-09 15:01:30,669 | INFO     | pid: 4110090
[2026-01-09 10:02:23] 2026-01-09 15:01:30,669 | INFO     | pgrp: 4110090
[2026-01-09 10:02:23] 2026-01-09 15:01:30,670 | INFO     | corecount: 12
[2026-01-09 10:02:23] 2026-01-09 15:01:30,670 | INFO     | event service: False
[2026-01-09 10:02:23] 2026-01-09 15:01:30,670 | INFO     | sizes: {0: 2283972, 2: 2284234, 11: 2284262, 4013: 2310182, 4016: 2319182, 4019: 2319238, 4026: 2319560}
[2026-01-09 10:02:23] 2026-01-09 15:01:30,670 | INFO     | --------------------------------------------------
[2026-01-09 10:02:23] 2026-01-09 15:01:30,670 | INFO     | 
[2026-01-09 10:02:23] 2026-01-09 15:01:30,670 | INFO     | executing command: ls -lF /var/lib/boinc/slots/36
[2026-01-09 10:02:23] 2026-01-09 15:01:30,682 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 10:02:23] 2026-01-09 15:01:30,682 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 10:02:23] 2026-01-09 15:01:30,682 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 10:02:23] 2026-01-09 15:01:30,682 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 10:02:23] 2026-01-09 15:01:30,682 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 10:02:23] 2026-01-09 15:01:30,682 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 10:02:23] 2026-01-09 15:01:30,683 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 10:02:23] 2026-01-09 15:01:30,683 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 10:02:23] 2026-01-09 15:01:30,683 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 10:02:23] 2026-01-09 15:01:30,683 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 10:02:23] 2026-01-09 15:01:30,683 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 10:02:23] 2026-01-09 15:01:30,683 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 10:02:23] 2026-01-09 15:01:30,683 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 10:02:23] 2026-01-09 15:01:30,683 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 10:02:23] 2026-01-09 15:01:30,683 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 10:02:23] 2026-01-09 15:01:30,683 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 10:02:23] 2026-01-09 15:01:30,684 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 10:02:23] 2026-01-09 15:01:30,684 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 10:02:23] 2026-01-09 15:01:30,684 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 10:02:23] 2026-01-09 15:01:30,684 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 10:02:23] 2026-01-09 15:01:30,684 | INFO     | job 6963148846 has completed (purged errors)
[2026-01-09 10:02:23] 2026-01-09 15:01:30,684 | INFO     | overall cleanup function is called
[2026-01-09 10:02:23] 2026-01-09 15:01:31,692 | INFO     | --- collectZombieJob: --- 10, [4110090]
[2026-01-09 10:02:23] 2026-01-09 15:01:31,692 | INFO     | zombie collector waiting for pid 4110090
[2026-01-09 10:02:23] 2026-01-09 15:01:31,692 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 10:02:23] 2026-01-09 15:01:31,692 | INFO     | collected zombie processes
[2026-01-09 10:02:23] 2026-01-09 15:01:31,692 | INFO     | will attempt to kill all subprocesses of pid=4110090
[2026-01-09 10:02:23] 2026-01-09 15:01:31,869 | INFO     | process IDs to be killed: [4110090] (in reverse order)
[2026-01-09 10:02:23] 2026-01-09 15:01:31,912 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 10:02:23] 2026-01-09 15:01:31,912 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 10:02:23] 2026-01-09 15:01:31,915 | INFO     | did not find any defunct processes belonging to 4110090
[2026-01-09 10:02:23] 2026-01-09 15:01:31,918 | INFO     | did not find any defunct processes belonging to 4110090
[2026-01-09 10:02:23] 2026-01-09 15:01:31,918 | INFO     | ready for new job
[2026-01-09 10:02:23] 2026-01-09 15:01:31,918 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 10:02:23] 2026-01-09 15:01:31,919 | INFO     | ***************************************
[2026-01-09 10:02:23] 2026-01-09 15:01:31,919 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 10:02:23] 2026-01-09 15:01:31,919 | INFO     | ***************************************
[2026-01-09 10:02:23] 2026-01-09 15:01:31,919 | INFO     | 
[2026-01-09 10:02:23] 2026-01-09 15:01:31,921 | INFO     | architecture information:
[2026-01-09 10:02:23] 2026-01-09 15:01:31,921 | INFO     | executing command: cat /etc/os-release
[2026-01-09 10:02:23] 2026-01-09 15:01:31,930 | INFO     | cat /etc/os-release:
[2026-01-09 10:02:23] NAME="CentOS Linux"
[2026-01-09 10:02:23] VERSION="7 (Core)"
[2026-01-09 10:02:23] ID="centos"
[2026-01-09 10:02:23] ID_LIKE="rhel fedora"
[2026-01-09 10:02:23] VERSION_ID="7"
[2026-01-09 10:02:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 10:02:23] ANSI_COLOR="0;31"
[2026-01-09 10:02:23] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 10:02:23] HOME_URL="https://www.centos.org/"
[2026-01-09 10:02:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 10:02:23] 
[2026-01-09 10:02:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 10:02:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 10:02:23] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 10:02:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 10:02:23] 
[2026-01-09 10:02:23] 2026-01-09 15:01:31,930 | INFO     | ***************************************
[2026-01-09 10:02:23] 2026-01-09 15:01:32,433 | INFO     | executing command: df -mP /var/lib/boinc/slots/36
[2026-01-09 10:02:23] 2026-01-09 15:01:32,445 | INFO     | sufficient remaining disk space (386435907584 B)
[2026-01-09 10:02:23] 2026-01-09 15:01:32,445 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 10:02:23] 2026-01-09 15:01:32,445 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 10:02:23] 2026-01-09 15:01:32,445 | INFO     | update_server=False
[2026-01-09 10:02:23] 2026-01-09 15:01:32,445 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 10:02:23] 2026-01-09 15:01:32,445 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 10:02:23] 2026-01-09 15:01:32,781 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 10:02:23] 2026-01-09 15:01:32,781 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 10:02:23] 2026-01-09 15:01:32,781 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 10:02:23] 2026-01-09 15:01:32,781 | INFO     | will abort loop
[2026-01-09 10:02:23] 2026-01-09 15:01:32,970 | INFO     | all payload control threads have been joined
[2026-01-09 10:02:23] 2026-01-09 15:01:33,323 | INFO     | all data control threads have been joined
[2026-01-09 10:02:23] 2026-01-09 15:01:33,450 | INFO     | [job] queue monitor thread has finished
[2026-01-09 10:02:23] 2026-01-09 15:01:33,450 | INFO     | [job] retrieve thread has finished
[2026-01-09 10:02:23] 2026-01-09 15:01:33,558 | INFO     | all job control threads have been joined
[2026-01-09 10:02:23] 2026-01-09 15:01:33,670 | INFO     | [data] copytool_in thread has finished
[2026-01-09 10:02:23] 2026-01-09 15:01:33,786 | INFO     | [job] job monitor thread has finished
[2026-01-09 10:02:23] 2026-01-09 15:01:33,893 | INFO     | [payload] validate_post thread has finished
[2026-01-09 10:02:23] 2026-01-09 15:01:33,914 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 10:02:23] 2026-01-09 15:01:33,971 | INFO     | [payload] control thread has finished
[2026-01-09 10:02:23] 2026-01-09 15:01:33,977 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 10:02:23] 2026-01-09 15:01:34,062 | INFO     | [job] validate thread has finished
[2026-01-09 10:02:23] 2026-01-09 15:01:34,218 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 10:02:23] 2026-01-09 15:01:34,232 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 10:02:23] 2026-01-09 15:01:34,325 | INFO     | [data] control thread has finished
[2026-01-09 10:02:23] 2026-01-09 15:01:34,481 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 10:02:23] 2026-01-09 15:01:34,563 | INFO     | [job] control thread has finished
[2026-01-09 10:02:23] 2026-01-09 15:01:34,868 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 10:02:23] 2026-01-09 15:01:34,946 | INFO     | [payload] failed_post thread has finished
[2026-01-09 10:02:23] 2026-01-09 15:01:35,920 | INFO     | [data] copytool_out thread has finished
[2026-01-09 10:02:23] 2026-01-09 15:01:38,486 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 10:02:23] 2026-01-09 15:02:02,878 | INFO     | PID=4102797 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 10:02:23] 2026-01-09 15:02:02,878 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 10:02:23] 2026-01-09 15:02:02,879 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 10:02:23] 2026-01-09 15:02:02,879 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 10:02:23] 2026-01-09 15:02:17,671 | INFO     | [monitor] cgroup control has ended
[2026-01-09 10:02:23] 2026-01-09 15:02:18,631 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140294040266560)>', '<ExcThread(monitor, started 140293712086784)>']
[2026-01-09 10:02:23] 2026-01-09 15:02:18,954 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 10:02:23] 2026-01-09 15:02:18,954 | INFO     | [monitor] control thread has ended
[2026-01-09 10:02:23] 2026-01-09 15:02:23,656 | INFO     | all workflow threads have been joined
[2026-01-09 10:02:23] 2026-01-09 15:02:23,656 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 10:02:23] 2026-01-09 15:02:23,656 | INFO     | traces error code: 0
[2026-01-09 10:02:23] 2026-01-09 15:02:23,656 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 10:02:23] 2026-01-09 15:02:23,748 [wrapper] ==== pilot stdout END ====
[2026-01-09 10:02:23] 2026-01-09 15:02:23,749 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 10:02:23] 2026-01-09 15:02:23,751 [wrapper] pilotpid: 4102797
[2026-01-09 10:02:23] 2026-01-09 15:02:23,752 [wrapper] Pilot exit status: 0
[2026-01-09 10:02:23] 2026-01-09 15:02:23,759 [wrapper] pandaids: 6963148846
[2026-01-09 10:02:23] 2026-01-09 15:02:23,796 [wrapper] cleanup supervisor_pilot    2363 4102798
[2026-01-09 10:02:23] 2026-01-09 15:02:23,798 [wrapper] Test setup, not cleaning
[2026-01-09 10:02:23] 2026-01-09 15:02:23,799 [wrapper] apfmon messages muted
[2026-01-09 10:02:23] 2026-01-09 15:02:23,801 [wrapper] ==== wrapper stdout END ====
[2026-01-09 10:02:23] 2026-01-09 15:02:23,803 [wrapper] ==== wrapper stderr END ====
[2026-01-09 10:02:23]  *** Error codes and diagnostics ***
[2026-01-09 10:02:23]     "exeErrorCode": 0,
[2026-01-09 10:02:23]     "exeErrorDiag": "",
[2026-01-09 10:02:23]     "pilotErrorCode": 0,
[2026-01-09 10:02:23]     "pilotErrorDiag": "",
[2026-01-09 10:02:23]  *** Listing of results directory ***
[2026-01-09 10:02:23] total 435420
[2026-01-09 10:02:23] -rw-r--r-- 1 boinc boinc      5112 Jan  8 11:02 queuedata.json
[2026-01-09 10:02:23] -rw-r--r-- 1 boinc boinc    579449 Jan  8 11:02 pilot3.tar.gz
[2026-01-09 10:02:23] -rwx------ 1 boinc boinc     36322 Jan  8 11:02 runpilot2-wrapper.sh
[2026-01-09 10:02:23] -rw-r--r-- 1 boinc boinc       100 Jan  9 08:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 10:02:23] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 08:53 run_atlas
[2026-01-09 10:02:23] -rw-r--r-- 1 boinc boinc       105 Jan  9 08:53 job.xml
[2026-01-09 10:02:23] -rw-r--r-- 2 boinc boinc 225296660 Jan  9 08:53 EVNT.47898824._001112.pool.root.1
[2026-01-09 10:02:23] -rw-r--r-- 2 boinc boinc    592395 Jan  9 08:53 input.tar.gz
[2026-01-09 10:02:23] -rw-r--r-- 2 boinc boinc     15847 Jan  9 08:53 start_atlas.sh
[2026-01-09 10:02:23] drwxrwx--x 1 boinc boinc        76 Jan  9 08:53 shared
[2026-01-09 10:02:23] -rw-r--r-- 1 boinc boinc         0 Jan  9 08:53 boinc_setup_complete
[2026-01-09 10:02:23] -rw-r--r-- 1 boinc boinc      9259 Jan  9 08:53 init_data.xml
[2026-01-09 10:02:23] -rw-r--r-- 1 boinc boinc         0 Jan  9 08:53 boinc_lockfile
[2026-01-09 10:02:23] -rw-r--r-- 1 boinc boinc      2520 Jan  9 08:53 pandaJob.out
[2026-01-09 10:02:23] -rw------- 1 boinc boinc    989377 Jan  9 08:54 agis_schedconf.cvmfs.json
[2026-01-09 10:02:23] -rw------- 1 boinc boinc   1516240 Jan  9 08:54 agis_ddmendpoints.agis.ALL.json
[2026-01-09 10:02:23] drwx------ 1 boinc boinc       414 Jan  9 08:54 pilot3
[2026-01-09 10:02:23] -rw------- 1 boinc boinc 214716450 Jan  9 10:00 HITS.47898826._028194.pool.root.1
[2026-01-09 10:02:23] -rw------- 1 boinc boinc        95 Jan  9 10:01 pilot_heartbeat.json
[2026-01-09 10:02:23] -rw-r--r-- 1 boinc boinc       529 Jan  9 10:01 boinc_task_state.xml
[2026-01-09 10:02:23] -rw------- 1 boinc boinc      1033 Jan  9 10:01 memory_monitor_summary.json
[2026-01-09 10:02:23] -rw------- 1 boinc boinc    386923 Jan  9 10:01 log.47898826._028194.job.log.tgz.1
[2026-01-09 10:02:23] -rw------- 1 boinc boinc      7835 Jan  9 10:01 heartbeat.json
[2026-01-09 10:02:23] -rw-r--r-- 1 boinc boinc      8192 Jan  9 10:02 boinc_mmap_file
[2026-01-09 10:02:23] -rw-r--r-- 1 boinc boinc        27 Jan  9 10:02 wrapper_checkpoint.txt
[2026-01-09 10:02:23] -rw------- 1 boinc boinc      4936 Jan  9 10:02 pilotlog.txt
[2026-01-09 10:02:23] -rw------- 1 boinc boinc    592381 Jan  9 10:02 log.47898826._028194.job.log.1
[2026-01-09 10:02:23] -rw------- 1 boinc boinc       357 Jan  9 10:02 output.list
[2026-01-09 10:02:23] -rw-r--r-- 1 boinc boinc       620 Jan  9 10:02 runtime_log
[2026-01-09 10:02:23] -rw------- 1 boinc boinc    993280 Jan  9 10:02 result.tar.gz
[2026-01-09 10:02:23] -rw-r--r-- 1 boinc boinc      8920 Jan  9 10:02 runtime_log.err
[2026-01-09 10:02:23] -rw------- 1 boinc boinc       672 Jan  9 10:02 JteKDm5d7x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmmqkKDmNAO8Qo.diag
[2026-01-09 10:02:23] -rw-r--r-- 1 boinc boinc     22591 Jan  9 10:02 stderr.txt
[2026-01-09 10:02:23] HITS file was successfully produced:
[2026-01-09 10:02:23] -rw------- 1 boinc boinc 214716450 Jan  9 10:00 shared/HITS.pool.root.1
[2026-01-09 10:02:23]  *** Contents of shared directory: ***
[2026-01-09 10:02:23] total 431276
[2026-01-09 10:02:23] -rw-r--r-- 2 boinc boinc 225296660 Jan  9 08:53 ATLAS.root_0
[2026-01-09 10:02:23] -rw-r--r-- 2 boinc boinc    592395 Jan  9 08:53 input.tar.gz
[2026-01-09 10:02:23] -rw-r--r-- 2 boinc boinc     15847 Jan  9 08:53 start_atlas.sh
[2026-01-09 10:02:23] -rw------- 1 boinc boinc 214716450 Jan  9 10:00 HITS.pool.root.1
[2026-01-09 10:02:23] -rw------- 1 boinc boinc    993280 Jan  9 10:02 result.tar.gz
10:02:25 (4098071): run_atlas exited; CPU time 44485.804662
10:02:25 (4098071): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN