Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:16:58 (4119): wrapper (7.7.26015): starting
17:16:58 (4119): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 17:16:58] Arguments: --nthreads 8
[2026-01-09 17:16:58] Threads: 8
[2026-01-09 17:16:58] Checking for CVMFS
[2026-01-09 17:16:58] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 17:16:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 17:16:58] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 17:16:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 17:16:59] 2.11.2.0 10325 35642 96176 154949 0 56 15929916 25165825 0 130560 0 15194087 99.833 9704659 3929 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 17:16:59] CVMFS is ok
[2026-01-09 17:16:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 17:16:59] Checking for apptainer binary...
[2026-01-09 17:16:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 17:16:59] Running /usr/bin/apptainer --version
[2026-01-09 17:16:59] apptainer version 1.3.2-1.el7
[2026-01-09 17:16:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 17:17:00] cg-vwn405.simple-grid.lan
[2026-01-09 17:17:00] apptainer works
[2026-01-09 17:17:00] Set ATHENA_PROC_NUMBER=8
[2026-01-09 17:17:00] Set ATHENA_CORE_NUMBER=8
[2026-01-09 17:17:00] Starting ATLAS job with PandaID=6963162236
[2026-01-09 17:17:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 20:06:37]  *** The last 200 lines of the pilot log: ***
[2026-01-09 20:06:37] 2026-01-09 19:05:33,821 | INFO     | total number of processed events: 400 (read)
[2026-01-09 20:06:37] 2026-01-09 19:05:33,822 | INFO     | executing command: lscpu
[2026-01-09 20:06:37] 2026-01-09 19:05:33,845 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 20:06:37] 2026-01-09 19:05:34,453 | INFO     | monitor loop #693: job 0:6963162236 is in state 'finished'
[2026-01-09 20:06:37] 2026-01-09 19:05:34,454 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 20:06:37] 2026-01-09 19:05:35,239 | INFO     | time since job start (10101s) is within the limit (349056.0s)
[2026-01-09 20:06:37] 2026-01-09 19:05:36,956 | INFO     | monitor loop #694: job 0:6963162236 is in state 'finished'
[2026-01-09 20:06:37] 2026-01-09 19:05:36,957 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 20:06:37] 2026-01-09 19:05:37,245 | INFO     | time since job start (10103s) is within the limit (349056.0s)
[2026-01-09 20:06:37] 2026-01-09 19:05:38,238 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 20:06:37] 2026-01-09 19:05:38,239 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 20:06:37] 2026-01-09 19:05:38,241 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6963162236/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 20:06:37] 2026-01-09 19:05:38,242 | INFO     | extracted standard info from prmon json
[2026-01-09 20:06:37] 2026-01-09 19:05:38,242 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 20:06:37] 2026-01-09 19:05:38,242 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 20:06:37] 2026-01-09 19:05:38,243 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 20:06:37] 2026-01-09 19:05:38,243 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 20:06:37] 2026-01-09 19:05:38,247 | INFO     | fitting pss+swap vs Time
[2026-01-09 20:06:37] 2026-01-09 19:05:38,247 | INFO     | sum of square deviations: 1392881930.0
[2026-01-09 20:06:37] 2026-01-09 19:05:38,248 | INFO     | sum of deviations: -14093143722.999994
[2026-01-09 20:06:37] 2026-01-09 19:05:38,248 | INFO     | mean x: 1767980466.0
[2026-01-09 20:06:37] 2026-01-09 19:05:38,249 | INFO     | mean y: 2555958.9757575756
[2026-01-09 20:06:37] 2026-01-09 19:05:38,249 | INFO     | intersect: 17890937070.212162
[2026-01-09 20:06:37] 2026-01-09 19:05:38,249 | INFO     | chi2: 1.7449160403970345
[2026-01-09 20:06:37] 2026-01-09 19:05:38,250 | INFO     | sum of square deviations: 1270051720.0
[2026-01-09 20:06:37] 2026-01-09 19:05:38,251 | INFO     | sum of deviations: -12966835483.5
[2026-01-09 20:06:37] 2026-01-09 19:05:38,251 | INFO     | mean x: 1767980313.5
[2026-01-09 20:06:37] 2026-01-09 19:05:38,251 | INFO     | mean y: 2557358.09375
[2026-01-09 20:06:37] 2026-01-09 19:05:38,251 | INFO     | intersect: 18053089869.65261
[2026-01-09 20:06:37] 2026-01-09 19:05:38,252 | INFO     | chi2: 1.7445322142654478
[2026-01-09 20:06:37] 2026-01-09 19:05:38,252 | INFO     | current chi2=1.7445322142654478 (change=0.02199682521683866 %)
[2026-01-09 20:06:37] 2026-01-09 19:05:38,252 | INFO     | right removable region: 159
[2026-01-09 20:06:37] 2026-01-09 19:05:38,252 | INFO     | sum of square deviations: 1270051720.0
[2026-01-09 20:06:37] 2026-01-09 19:05:38,253 | INFO     | sum of deviations: -40162831270.0
[2026-01-09 20:06:37] 2026-01-09 19:05:38,254 | INFO     | mean x: 1767980618.5
[2026-01-09 20:06:37] 2026-01-09 19:05:38,254 | INFO     | mean y: 2587888.6875
[2026-01-09 20:06:37] 2026-01-09 19:05:38,254 | INFO     | intersect: 55911419120.730354
[2026-01-09 20:06:37] 2026-01-09 19:05:38,254 | INFO     | chi2: 0.19734856286263183
[2026-01-09 20:06:37] 2026-01-09 19:05:38,254 | INFO     | current chi2=0.19734856286263183 (change=88.69008260032227 %)
[2026-01-09 20:06:37] 2026-01-09 19:05:38,255 | INFO     | sum of square deviations: 1154663510.0
[2026-01-09 20:06:37] 2026-01-09 19:05:38,256 | INFO     | sum of deviations: -41593987345.0
[2026-01-09 20:06:37] 2026-01-09 19:05:38,256 | INFO     | mean x: 1767980771.0
[2026-01-09 20:06:37] 2026-01-09 19:05:38,256 | INFO     | mean y: 2589709.5483870967
[2026-01-09 20:06:37] 2026-01-09 19:05:38,256 | INFO     | intersect: 63689862389.688194
[2026-01-09 20:06:37] 2026-01-09 19:05:38,257 | INFO     | chi2: 0.15152809551276367
[2026-01-09 20:06:37] 2026-01-09 19:05:38,257 | INFO     | current chi2=0.15152809551276367 (change=23.218039536351913 %)
[2026-01-09 20:06:37] 2026-01-09 19:05:38,257 | INFO     | left removable region: 20
[2026-01-09 20:06:37] 2026-01-09 19:05:38,257 | INFO     | sum of square deviations: 832722590.0
[2026-01-09 20:06:37] 2026-01-09 19:05:38,259 | INFO     | sum of deviations: -31668881206.99999
[2026-01-09 20:06:37] 2026-01-09 19:05:38,259 | INFO     | mean x: 1767980893.0
[2026-01-09 20:06:37] 2026-01-09 19:05:38,259 | INFO     | mean y: 2580667.4820143883
[2026-01-09 20:06:37] 2026-01-09 19:05:38,259 | INFO     | intersect: 67239830562.02705
[2026-01-09 20:06:37] 2026-01-09 19:05:38,259 | INFO     | chi2: 0.1433246161526069
[2026-01-09 20:06:37] 2026-01-09 19:05:38,259 | INFO     | current memory leak: -38.03 B/s (using 139 data points, chi2=0.14)
[2026-01-09 20:06:37] 2026-01-09 19:05:38,260 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-01-09 20:06:37] 2026-01-09 19:05:38,260 | INFO     | ..............................
[2026-01-09 20:06:37] 2026-01-09 19:05:38,260 | INFO     | . Timing measurements:
[2026-01-09 20:06:37] 2026-01-09 19:05:38,261 | INFO     | . get job = 0 s
[2026-01-09 20:06:37] 2026-01-09 19:05:38,261 | INFO     | . initial setup = 1 s
[2026-01-09 20:06:37] 2026-01-09 19:05:38,261 | INFO     | . payload setup = 6 s
[2026-01-09 20:06:37] 2026-01-09 19:05:38,261 | INFO     | . stage-in = 0 s
[2026-01-09 20:06:37] 2026-01-09 19:05:38,261 | INFO     | . payload execution = 10068 s
[2026-01-09 20:06:37] 2026-01-09 19:05:38,261 | INFO     | . stage-out = 0 s
[2026-01-09 20:06:37] 2026-01-09 19:05:38,261 | INFO     | . log creation = 0 s
[2026-01-09 20:06:37] 2026-01-09 19:05:38,261 | INFO     | ..............................
[2026-01-09 20:06:37] 2026-01-09 19:05:38,377 | INFO     | 
[2026-01-09 20:06:37] 2026-01-09 19:05:38,377 | INFO     | job summary report
[2026-01-09 20:06:37] 2026-01-09 19:05:38,378 | INFO     | --------------------------------------------------
[2026-01-09 20:06:37] 2026-01-09 19:05:38,378 | INFO     | PanDA job id: 6963162236
[2026-01-09 20:06:37] 2026-01-09 19:05:38,378 | INFO     | task id: 47898826
[2026-01-09 20:06:37] 2026-01-09 19:05:38,378 | INFO     | errors: (none)
[2026-01-09 20:06:37] 2026-01-09 19:05:38,378 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 20:06:37] 2026-01-09 19:05:38,378 | INFO     | pilot state: finished 
[2026-01-09 20:06:37] 2026-01-09 19:05:38,378 | INFO     | transexitcode: 0
[2026-01-09 20:06:37] 2026-01-09 19:05:38,378 | INFO     | exeerrorcode: 0
[2026-01-09 20:06:37] 2026-01-09 19:05:38,378 | INFO     | exeerrordiag: 
[2026-01-09 20:06:37] 2026-01-09 19:05:38,378 | INFO     | exitcode: 0
[2026-01-09 20:06:37] 2026-01-09 19:05:38,379 | INFO     | exitmsg: OK
[2026-01-09 20:06:37] 2026-01-09 19:05:38,379 | INFO     | cpuconsumptiontime: 74889 s
[2026-01-09 20:06:37] 2026-01-09 19:05:38,379 | INFO     | nevents: 400
[2026-01-09 20:06:37] 2026-01-09 19:05:38,379 | INFO     | neventsw: 0
[2026-01-09 20:06:37] 2026-01-09 19:05:38,379 | INFO     | pid: 14336
[2026-01-09 20:06:37] 2026-01-09 19:05:38,379 | INFO     | pgrp: 14336
[2026-01-09 20:06:37] 2026-01-09 19:05:38,379 | INFO     | corecount: 8
[2026-01-09 20:06:37] 2026-01-09 19:05:38,379 | INFO     | event service: False
[2026-01-09 20:06:37] 2026-01-09 19:05:38,379 | INFO     | sizes: {0: 2283970, 1: 2283970, 5: 2284260, 11: 2284316, 10078: 2312716, 10079: 2312715, 10080: 2321897, 10081: 2321953, 10088: 2322211}
[2026-01-09 20:06:37] 2026-01-09 19:05:38,379 | INFO     | --------------------------------------------------
[2026-01-09 20:06:37] 2026-01-09 19:05:38,379 | INFO     | 
[2026-01-09 20:06:37] 2026-01-09 19:05:38,380 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2026-01-09 20:06:37] 2026-01-09 19:05:38,404 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 20:06:37] 2026-01-09 19:05:38,404 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 20:06:37] 2026-01-09 19:05:38,404 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 20:06:37] 2026-01-09 19:05:38,405 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 20:06:37] 2026-01-09 19:05:38,405 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 20:06:37] 2026-01-09 19:05:38,405 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 20:06:37] 2026-01-09 19:05:38,405 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 20:06:37] 2026-01-09 19:05:38,405 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 20:06:37] 2026-01-09 19:05:38,405 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 20:06:37] 2026-01-09 19:05:38,405 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 20:06:37] 2026-01-09 19:05:38,405 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 20:06:37] 2026-01-09 19:05:38,406 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 20:06:37] 2026-01-09 19:05:38,406 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 20:06:37] 2026-01-09 19:05:38,406 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 20:06:37] 2026-01-09 19:05:38,406 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 20:06:37] 2026-01-09 19:05:38,406 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 20:06:37] 2026-01-09 19:05:38,406 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 20:06:37] 2026-01-09 19:05:38,406 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 20:06:37] 2026-01-09 19:05:38,406 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 20:06:37] 2026-01-09 19:05:38,406 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 20:06:37] 2026-01-09 19:05:38,407 | INFO     | job 6963162236 has completed (purged errors)
[2026-01-09 20:06:37] 2026-01-09 19:05:38,407 | INFO     | overall cleanup function is called
[2026-01-09 20:06:37] 2026-01-09 19:05:39,415 | INFO     | --- collectZombieJob: --- 10, [14336]
[2026-01-09 20:06:37] 2026-01-09 19:05:39,415 | INFO     | zombie collector waiting for pid 14336
[2026-01-09 20:06:37] 2026-01-09 19:05:39,415 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 20:06:37] 2026-01-09 19:05:39,416 | INFO     | collected zombie processes
[2026-01-09 20:06:37] 2026-01-09 19:05:39,416 | INFO     | will attempt to kill all subprocesses of pid=14336
[2026-01-09 20:06:37] 2026-01-09 19:05:39,479 | INFO     | process IDs to be killed: [14336] (in reverse order)
[2026-01-09 20:06:37] 2026-01-09 19:05:39,525 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 20:06:37] 2026-01-09 19:05:39,526 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 20:06:37] 2026-01-09 19:05:39,528 | INFO     | did not find any defunct processes belonging to 14336
[2026-01-09 20:06:37] 2026-01-09 19:05:39,529 | INFO     | did not find any defunct processes belonging to 14336
[2026-01-09 20:06:37] 2026-01-09 19:05:39,530 | INFO     | ready for new job
[2026-01-09 20:06:37] 2026-01-09 19:05:39,530 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 20:06:37] 2026-01-09 19:05:39,532 | INFO     | ***************************************
[2026-01-09 20:06:37] 2026-01-09 19:05:39,532 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 20:06:37] 2026-01-09 19:05:39,532 | INFO     | ***************************************
[2026-01-09 20:06:37] 2026-01-09 19:05:39,532 | INFO     | 
[2026-01-09 20:06:37] 2026-01-09 19:05:39,533 | INFO     | pilot is running in a VM
[2026-01-09 20:06:37] 2026-01-09 19:05:39,533 | INFO     | architecture information:
[2026-01-09 20:06:37] 2026-01-09 19:05:39,533 | INFO     | executing command: cat /etc/os-release
[2026-01-09 20:06:37] 2026-01-09 19:05:39,550 | INFO     | cat /etc/os-release:
[2026-01-09 20:06:37] NAME="CentOS Linux"
[2026-01-09 20:06:37] VERSION="7 (Core)"
[2026-01-09 20:06:37] ID="centos"
[2026-01-09 20:06:37] ID_LIKE="rhel fedora"
[2026-01-09 20:06:37] VERSION_ID="7"
[2026-01-09 20:06:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 20:06:37] ANSI_COLOR="0;31"
[2026-01-09 20:06:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 20:06:37] HOME_URL="https://www.centos.org/"
[2026-01-09 20:06:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 20:06:37] 
[2026-01-09 20:06:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 20:06:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 20:06:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 20:06:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 20:06:37] 
[2026-01-09 20:06:37] 2026-01-09 19:05:39,551 | INFO     | ***************************************
[2026-01-09 20:06:37] 2026-01-09 19:05:40,054 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2026-01-09 20:06:37] 2026-01-09 19:05:40,075 | INFO     | sufficient remaining disk space (498367201280 B)
[2026-01-09 20:06:37] 2026-01-09 19:05:40,075 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 20:06:37] 2026-01-09 19:05:40,075 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 20:06:37] 2026-01-09 19:05:40,075 | INFO     | update_server=False
[2026-01-09 20:06:37] 2026-01-09 19:05:40,076 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 20:06:37] 2026-01-09 19:05:40,076 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 20:06:37] 2026-01-09 19:05:40,465 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 20:06:37] 2026-01-09 19:05:40,465 | INFO     | aborting loop
[2026-01-09 20:06:37] 2026-01-09 19:05:40,907 | INFO     | all data control threads have been joined
[2026-01-09 20:06:37] 2026-01-09 19:05:41,032 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 20:06:37] 2026-01-09 19:05:41,081 | INFO     | [job] retrieve thread has finished
[2026-01-09 20:06:37] 2026-01-09 19:05:41,082 | INFO     | [job] queue monitor thread has finished
[2026-01-09 20:06:37] 2026-01-09 19:05:41,189 | INFO     | all payload control threads have been joined
[2026-01-09 20:06:37] 2026-01-09 19:05:41,233 | INFO     | [payload] failed_post thread has finished
[2026-01-09 20:06:37] 2026-01-09 19:05:41,373 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 20:06:37] 2026-01-09 19:05:41,414 | INFO     | all job control threads have been joined
[2026-01-09 20:06:37] 2026-01-09 19:05:41,471 | INFO     | [job] job monitor thread has finished
[2026-01-09 20:06:37] 2026-01-09 19:05:41,639 | INFO     | [payload] validate_post thread has finished
[2026-01-09 20:06:37] 2026-01-09 19:05:41,739 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 20:06:37] 2026-01-09 19:05:41,740 | INFO     | [job] validate thread has finished
[2026-01-09 20:06:37] 2026-01-09 19:05:41,912 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 20:06:37] 2026-01-09 19:05:41,913 | INFO     | [data] control thread has finished
[2026-01-09 20:06:37] 2026-01-09 19:05:41,943 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 20:06:37] 2026-01-09 19:05:41,948 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 20:06:37] 2026-01-09 19:05:42,023 | INFO     | [data] copytool_in thread has finished
[2026-01-09 20:06:37] 2026-01-09 19:05:42,194 | INFO     | [payload] control thread has finished
[2026-01-09 20:06:37] 2026-01-09 19:05:42,419 | INFO     | [job] control thread has finished
[2026-01-09 20:06:37] 2026-01-09 19:05:43,038 | INFO     | [data] copytool_out thread has finished
[2026-01-09 20:06:37] 2026-01-09 19:05:45,919 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 20:06:37] 2026-01-09 19:06:10,336 | INFO     | PID=7869 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 20:06:37] 2026-01-09 19:06:10,336 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 20:06:37] 2026-01-09 19:06:10,336 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 20:06:37] 2026-01-09 19:06:10,337 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 20:06:37] 2026-01-09 19:06:30,690 | INFO     | [monitor] cgroup control has ended
[2026-01-09 20:06:37] 2026-01-09 19:06:31,696 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140486081996608)>', '<ExcThread(monitor, started 140485393889024)>']
[2026-01-09 20:06:37] 2026-01-09 19:06:32,446 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 20:06:37] 2026-01-09 19:06:32,447 | INFO     | [monitor] control thread has ended
[2026-01-09 20:06:37] 2026-01-09 19:06:36,722 | INFO     | all workflow threads have been joined
[2026-01-09 20:06:37] 2026-01-09 19:06:36,722 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 20:06:37] 2026-01-09 19:06:36,723 | INFO     | traces error code: 0
[2026-01-09 20:06:37] 2026-01-09 19:06:36,723 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 20:06:37] 2026-01-09 19:06:37,003 [wrapper] ==== pilot stdout END ====
[2026-01-09 20:06:37] 2026-01-09 19:06:37,008 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 20:06:37] 2026-01-09 19:06:37,013 [wrapper] pilotpid: 7869
[2026-01-09 20:06:37] 2026-01-09 19:06:37,017 [wrapper] Pilot exit status: 0
[2026-01-09 20:06:37] 2026-01-09 19:06:37,048 [wrapper] pandaids: 6963162236
[2026-01-09 20:06:37] 2026-01-09 19:06:37,090 [wrapper] cleanup supervisor_pilot  1117 7870
[2026-01-09 20:06:37] 2026-01-09 19:06:37,095 [wrapper] Test setup, not cleaning
[2026-01-09 20:06:37] 2026-01-09 19:06:37,102 [wrapper] apfmon messages muted
[2026-01-09 20:06:37] 2026-01-09 19:06:37,107 [wrapper] ==== wrapper stdout END ====
[2026-01-09 20:06:37] 2026-01-09 19:06:37,110 [wrapper] ==== wrapper stderr END ====
[2026-01-09 20:06:37]  *** Error codes and diagnostics ***
[2026-01-09 20:06:37]     "exeErrorCode": 0,
[2026-01-09 20:06:37]     "exeErrorDiag": "",
[2026-01-09 20:06:37]     "pilotErrorCode": 0,
[2026-01-09 20:06:37]     "pilotErrorDiag": "",
[2026-01-09 20:06:37]  *** Listing of results directory ***
[2026-01-09 20:06:37] total 438984
[2026-01-09 20:06:37] -rw-r--r--. 1 boinc boinc    579449 Jan  8 22:44 pilot3.tar.gz
[2026-01-09 20:06:37] -rwx------. 1 boinc boinc     36322 Jan  8 22:49 runpilot2-wrapper.sh
[2026-01-09 20:06:37] -rw-r--r--. 1 boinc boinc      5112 Jan  8 22:51 queuedata.json
[2026-01-09 20:06:37] -rw-r--r--. 1 boinc boinc       100 Jan  9 17:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 20:06:37] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 17:16 run_atlas
[2026-01-09 20:06:37] -rw-r--r--. 1 boinc boinc       105 Jan  9 17:16 job.xml
[2026-01-09 20:06:37] -rw-r--r--. 1 boinc boinc      6391 Jan  9 17:16 init_data.xml
[2026-01-09 20:06:37] -rw-r--r--. 2 boinc boinc 224174091 Jan  9 17:16 EVNT.47898824._001290.pool.root.1
[2026-01-09 20:06:37] -rw-r--r--. 2 boinc boinc     15847 Jan  9 17:16 start_atlas.sh
[2026-01-09 20:06:37] drwxrwx--x. 2 boinc boinc        68 Jan  9 17:16 shared
[2026-01-09 20:06:37] -rw-r--r--. 2 boinc boinc    592399 Jan  9 17:16 input.tar.gz
[2026-01-09 20:06:37] -rw-r--r--. 1 boinc boinc         0 Jan  9 17:16 boinc_lockfile
[2026-01-09 20:06:37] -rw-r--r--. 1 boinc boinc      2519 Jan  9 17:17 pandaJob.out
[2026-01-09 20:06:37] -rw-------. 1 boinc boinc    989377 Jan  9 17:17 agis_schedconf.cvmfs.json
[2026-01-09 20:06:37] -rw-------. 1 boinc boinc   1516240 Jan  9 17:17 agis_ddmendpoints.agis.ALL.json
[2026-01-09 20:06:37] drwx------. 5 boinc boinc      4096 Jan  9 17:17 pilot3
[2026-01-09 20:06:37] -rw-------. 1 boinc boinc 217926301 Jan  9 20:04 HITS.47898826._033863.pool.root.1
[2026-01-09 20:06:37] -rw-r--r--. 1 boinc boinc       530 Jan  9 20:04 boinc_task_state.xml
[2026-01-09 20:06:37] -rw-------. 1 boinc boinc        95 Jan  9 20:05 pilot_heartbeat.json
[2026-01-09 20:06:37] -rw-------. 1 boinc boinc      1012 Jan  9 20:05 memory_monitor_summary.json
[2026-01-09 20:06:37] -rw-------. 1 boinc boinc    399723 Jan  9 20:05 log.47898826._033863.job.log.tgz.1
[2026-01-09 20:06:37] -rw-------. 1 boinc boinc      7779 Jan  9 20:05 heartbeat.json
[2026-01-09 20:06:37] -rw-r--r--. 1 boinc boinc        28 Jan  9 20:06 wrapper_checkpoint.txt
[2026-01-09 20:06:37] -rw-r--r--. 1 boinc boinc      8192 Jan  9 20:06 boinc_mmap_file
[2026-01-09 20:06:37] -rw-------. 1 boinc boinc      4808 Jan  9 20:06 pilotlog.txt
[2026-01-09 20:06:37] -rw-------. 1 boinc boinc   1358411 Jan  9 20:06 log.47898826._033863.job.log.1
[2026-01-09 20:06:37] -rw-------. 1 boinc boinc       357 Jan  9 20:06 output.list
[2026-01-09 20:06:37] -rw-r--r--. 1 boinc boinc       620 Jan  9 20:06 runtime_log
[2026-01-09 20:06:37] -rw-------. 1 boinc boinc   1781760 Jan  9 20:06 result.tar.gz
[2026-01-09 20:06:37] -rw-r--r--. 1 boinc boinc      8817 Jan  9 20:06 runtime_log.err
[2026-01-09 20:06:37] -rw-------. 1 boinc boinc       656 Jan  9 20:06 G1HLDmz3Cy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmDSgKDmrRGjSn.diag
[2026-01-09 20:06:37] -rw-r--r--. 1 boinc boinc     21028 Jan  9 20:06 stderr.txt
[2026-01-09 20:06:37] HITS file was successfully produced:
[2026-01-09 20:06:37] -rw-------. 1 boinc boinc 217926301 Jan  9 20:04 shared/HITS.pool.root.1
[2026-01-09 20:06:37]  *** Contents of shared directory: ***
[2026-01-09 20:06:37] total 434080
[2026-01-09 20:06:37] -rw-r--r--. 2 boinc boinc 224174091 Jan  9 17:16 ATLAS.root_0
[2026-01-09 20:06:37] -rw-r--r--. 2 boinc boinc     15847 Jan  9 17:16 start_atlas.sh
[2026-01-09 20:06:37] -rw-r--r--. 2 boinc boinc    592399 Jan  9 17:16 input.tar.gz
[2026-01-09 20:06:37] -rw-------. 1 boinc boinc 217926301 Jan  9 20:04 HITS.pool.root.1
[2026-01-09 20:06:37] -rw-------. 1 boinc boinc   1781760 Jan  9 20:06 result.tar.gz
20:06:39 (4119): run_atlas exited; CPU time 74958.549499
20:06:39 (4119): called boinc_finish(0)

</stderr_txt>
]]>

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