Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:37:07 (2626490): wrapper (7.7.26015): starting
08:37:07 (2626490): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 08:37:07] Arguments: --nthreads 8
[2026-01-09 08:37:07] Threads: 8
[2026-01-09 08:37:07] Checking for CVMFS
[2026-01-09 08:37:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 08:37:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 08:37:08] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 08:37:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 08:37:09] 2.13.3.0 14106 93430 187280 154945 1 961 21088948 40960000 34975 16776704 0 1059474245 99.712 810416771 48475 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 08:37:09] CVMFS is ok
[2026-01-09 08:37:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 08:37:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 08:37:09] Further information can be found at the LHC@home message board.
[2026-01-09 08:37:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 08:37:09] Checking for apptainer binary...
[2026-01-09 08:37:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 08:37:09] Running /usr/bin/apptainer --version
[2026-01-09 08:37:09] apptainer version 1.4.5-2.el9
[2026-01-09 08:37:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 08:37:09] c8-7-5.aglt2.org
[2026-01-09 08:37:09] apptainer works
[2026-01-09 08:37:09] Set ATHENA_PROC_NUMBER=8
[2026-01-09 08:37:09] Set ATHENA_CORE_NUMBER=8
[2026-01-09 08:37:09] Starting ATLAS job with PandaID=6963148851
[2026-01-09 08:37:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 11:00:11]  *** The last 200 lines of the pilot log: ***
[2026-01-09 11:00:11] 2026-01-09 15:59:10,919 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 11:00:11] 2026-01-09 15:59:12,243 | INFO     | time since job start (8450s) is within the limit (349056.0s)
[2026-01-09 11:00:11] 2026-01-09 15:59:13,429 | INFO     | monitor loop #539: job 0:6963148851 is in state 'finished'
[2026-01-09 11:00:11] 2026-01-09 15:59:13,444 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 11:00:11] 2026-01-09 15:59:14,316 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 11:00:11] 2026-01-09 15:59:14,361 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.9928750000004
[2026-01-09 11:00:11] 2026-01-09 15:59:14,409 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6963148851/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 11:00:11] 2026-01-09 15:59:14,410 | INFO     | extracted standard info from prmon json
[2026-01-09 11:00:11] 2026-01-09 15:59:14,411 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 11:00:11] 2026-01-09 15:59:14,411 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 11:00:11] 2026-01-09 15:59:14,411 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 11:00:11] 2026-01-09 15:59:14,411 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 11:00:11] 2026-01-09 15:59:14,413 | INFO     | fitting pss+swap vs Time
[2026-01-09 11:00:11] 2026-01-09 15:59:14,413 | INFO     | sum of square deviations: 779977797.1102961
[2026-01-09 11:00:11] 2026-01-09 15:59:14,413 | INFO     | sum of deviations: 22243892071.125034
[2026-01-09 11:00:11] 2026-01-09 15:59:14,413 | INFO     | mean x: 1767970162.5808823
[2026-01-09 11:00:11] 2026-01-09 15:59:14,413 | INFO     | mean y: 2431097.125
[2026-01-09 11:00:11] 2026-01-09 15:59:14,413 | INFO     | intersect: -50417641919.2065
[2026-01-09 11:00:11] 2026-01-09 15:59:14,413 | INFO     | chi2: 4.076815251007327
[2026-01-09 11:00:11] 2026-01-09 15:59:14,413 | INFO     | sum of square deviations: 697068853.2366428
[2026-01-09 11:00:11] 2026-01-09 15:59:14,414 | INFO     | sum of deviations: 30242788423.358784
[2026-01-09 11:00:11] 2026-01-09 15:59:14,414 | INFO     | mean x: 1767970010.076336
[2026-01-09 11:00:11] 2026-01-09 15:59:14,414 | INFO     | mean y: 2445318.6641221372
[2026-01-09 11:00:11] 2026-01-09 15:59:14,414 | INFO     | intersect: -76702090689.96248
[2026-01-09 11:00:11] 2026-01-09 15:59:14,414 | INFO     | chi2: 3.3422298589039534
[2026-01-09 11:00:11] 2026-01-09 15:59:14,414 | INFO     | current chi2=3.3422298589039534 (change=18.018608812893035 %)
[2026-01-09 11:00:11] 2026-01-09 15:59:14,414 | INFO     | right removable region: 130
[2026-01-09 11:00:11] 2026-01-09 15:59:14,414 | INFO     | sum of square deviations: 697070562.0763377
[2026-01-09 11:00:11] 2026-01-09 15:59:14,415 | INFO     | sum of deviations: -14001035657.381683
[2026-01-09 11:00:11] 2026-01-09 15:59:14,415 | INFO     | mean x: 1767970315.0839694
[2026-01-09 11:00:11] 2026-01-09 15:59:14,415 | INFO     | mean y: 2497307.580152672
[2026-01-09 11:00:11] 2026-01-09 15:59:14,415 | INFO     | intersect: 35513128181.09018
[2026-01-09 11:00:11] 2026-01-09 15:59:14,415 | INFO     | chi2: 0.916466339803778
[2026-01-09 11:00:11] 2026-01-09 15:59:14,415 | INFO     | current chi2=0.916466339803778 (change=77.5200424013001 %)
[2026-01-09 11:00:11] 2026-01-09 15:59:14,415 | INFO     | sum of square deviations: 620256464.5396805
[2026-01-09 11:00:11] 2026-01-09 15:59:14,415 | INFO     | sum of deviations: -17349000075.634933
[2026-01-09 11:00:11] 2026-01-09 15:59:14,415 | INFO     | mean x: 1767970467.5873015
[2026-01-09 11:00:11] 2026-01-09 15:59:14,415 | INFO     | mean y: 2503774.103174603
[2026-01-09 11:00:11] 2026-01-09 15:59:14,415 | INFO     | intersect: 49453854190.347275
[2026-01-09 11:00:11] 2026-01-09 15:59:14,415 | INFO     | chi2: 0.8410328213257671
[2026-01-09 11:00:11] 2026-01-09 15:59:14,416 | INFO     | current chi2=0.8410328213257671 (change=8.23090987653314 %)
[2026-01-09 11:00:11] 2026-01-09 15:59:14,416 | INFO     | left removable region: 20
[2026-01-09 11:00:11] 2026-01-09 15:59:14,416 | INFO     | sum of square deviations: 412697008.76363593
[2026-01-09 11:00:11] 2026-01-09 15:59:14,416 | INFO     | sum of deviations: -4870493962.727275
[2026-01-09 11:00:11] 2026-01-09 15:59:14,416 | INFO     | mean x: 1767970589.581818
[2026-01-09 11:00:11] 2026-01-09 15:59:14,416 | INFO     | mean y: 2513373.6363636362
[2026-01-09 11:00:11] 2026-01-09 15:59:14,416 | INFO     | intersect: 20867433399.67257
[2026-01-09 11:00:11] 2026-01-09 15:59:14,416 | INFO     | chi2: 0.029030474729017954
[2026-01-09 11:00:11] 2026-01-09 15:59:14,416 | INFO     | current memory leak: -11.80 B/s (using 110 data points, chi2=0.03)
[2026-01-09 11:00:11] 2026-01-09 15:59:14,416 | INFO     | could have reported an average CPU frequency of 3799 MHz (8 samples)
[2026-01-09 11:00:11] 2026-01-09 15:59:14,416 | INFO     | ..............................
[2026-01-09 11:00:11] 2026-01-09 15:59:14,417 | INFO     | . Timing measurements:
[2026-01-09 11:00:11] 2026-01-09 15:59:14,417 | INFO     | . get job = 0 s
[2026-01-09 11:00:11] 2026-01-09 15:59:14,417 | INFO     | . initial setup = 6 s
[2026-01-09 11:00:11] 2026-01-09 15:59:14,417 | INFO     | . payload setup = 47 s
[2026-01-09 11:00:11] 2026-01-09 15:59:14,417 | INFO     | . stage-in = 0 s
[2026-01-09 11:00:11] 2026-01-09 15:59:14,417 | INFO     | . payload execution = 8297 s
[2026-01-09 11:00:11] 2026-01-09 15:59:14,417 | INFO     | . stage-out = 2 s
[2026-01-09 11:00:11] 2026-01-09 15:59:14,417 | INFO     | . log creation = 0 s
[2026-01-09 11:00:11] 2026-01-09 15:59:14,417 | INFO     | ..............................
[2026-01-09 11:00:11] 2026-01-09 15:59:14,574 | INFO     | 
[2026-01-09 11:00:11] 2026-01-09 15:59:14,575 | INFO     | job summary report
[2026-01-09 11:00:11] 2026-01-09 15:59:14,575 | INFO     | --------------------------------------------------
[2026-01-09 11:00:11] 2026-01-09 15:59:14,575 | INFO     | PanDA job id: 6963148851
[2026-01-09 11:00:11] 2026-01-09 15:59:14,575 | INFO     | task id: 47898826
[2026-01-09 11:00:11] 2026-01-09 15:59:14,575 | INFO     | errors: (none)
[2026-01-09 11:00:11] 2026-01-09 15:59:14,575 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 11:00:11] 2026-01-09 15:59:14,575 | INFO     | pilot state: finished 
[2026-01-09 11:00:11] 2026-01-09 15:59:14,575 | INFO     | transexitcode: 0
[2026-01-09 11:00:11] 2026-01-09 15:59:14,575 | INFO     | exeerrorcode: 0
[2026-01-09 11:00:11] 2026-01-09 15:59:14,575 | INFO     | exeerrordiag: 
[2026-01-09 11:00:11] 2026-01-09 15:59:14,575 | INFO     | exitcode: 0
[2026-01-09 11:00:11] 2026-01-09 15:59:14,575 | INFO     | exitmsg: OK
[2026-01-09 11:00:11] 2026-01-09 15:59:14,575 | INFO     | cpuconsumptiontime: 31582 s
[2026-01-09 11:00:11] 2026-01-09 15:59:14,575 | INFO     | nevents: 400
[2026-01-09 11:00:11] 2026-01-09 15:59:14,575 | INFO     | neventsw: 0
[2026-01-09 11:00:11] 2026-01-09 15:59:14,575 | INFO     | pid: 2666861
[2026-01-09 11:00:11] 2026-01-09 15:59:14,575 | INFO     | pgrp: 2666861
[2026-01-09 11:00:11] 2026-01-09 15:59:14,575 | INFO     | corecount: 8
[2026-01-09 11:00:11] 2026-01-09 15:59:14,575 | INFO     | event service: False
[2026-01-09 11:00:11] 2026-01-09 15:59:14,575 | INFO     | sizes: {0: 2283969, 1: 2283969, 12: 2283997, 22: 2284025, 29: 2284315, 33: 2284343, 8349: 2312310, 8352: 2321336, 8354: 2321392, 8389: 2321586}
[2026-01-09 11:00:11] 2026-01-09 15:59:14,575 | INFO     | --------------------------------------------------
[2026-01-09 11:00:11] 2026-01-09 15:59:14,575 | INFO     | 
[2026-01-09 11:00:11] 2026-01-09 15:59:14,576 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2026-01-09 11:00:11] 2026-01-09 15:59:14,664 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 11:00:11] 2026-01-09 15:59:14,664 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 11:00:11] 2026-01-09 15:59:14,664 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 11:00:11] 2026-01-09 15:59:14,664 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 11:00:11] 2026-01-09 15:59:14,664 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 11:00:11] 2026-01-09 15:59:14,664 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 11:00:11] 2026-01-09 15:59:14,664 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 11:00:11] 2026-01-09 15:59:14,664 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 11:00:11] 2026-01-09 15:59:14,664 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 11:00:11] 2026-01-09 15:59:14,664 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 11:00:11] 2026-01-09 15:59:14,664 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 11:00:11] 2026-01-09 15:59:14,664 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 11:00:11] 2026-01-09 15:59:14,664 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 11:00:11] 2026-01-09 15:59:14,664 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 11:00:11] 2026-01-09 15:59:14,664 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 11:00:11] 2026-01-09 15:59:14,664 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 11:00:11] 2026-01-09 15:59:14,664 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 11:00:11] 2026-01-09 15:59:14,664 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 11:00:11] 2026-01-09 15:59:14,665 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 11:00:11] 2026-01-09 15:59:14,665 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 11:00:11] 2026-01-09 15:59:14,665 | INFO     | job 6963148851 has completed (purged errors)
[2026-01-09 11:00:11] 2026-01-09 15:59:14,665 | INFO     | overall cleanup function is called
[2026-01-09 11:00:11] 2026-01-09 15:59:15,204 | INFO     | PID=2639022 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 11:00:11] 2026-01-09 15:59:15,204 | INFO     | .. there are 39 such processes running
[2026-01-09 11:00:11] 2026-01-09 15:59:15,687 | INFO     | --- collectZombieJob: --- 10, [2666861]
[2026-01-09 11:00:11] 2026-01-09 15:59:15,688 | INFO     | zombie collector waiting for pid 2666861
[2026-01-09 11:00:11] 2026-01-09 15:59:15,688 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 11:00:11] 2026-01-09 15:59:15,688 | INFO     | collected zombie processes
[2026-01-09 11:00:11] 2026-01-09 15:59:15,688 | INFO     | will attempt to kill all subprocesses of pid=2666861
[2026-01-09 11:00:11] 2026-01-09 15:59:17,048 | INFO     | process IDs to be killed: [2666861] (in reverse order)
[2026-01-09 11:00:11] 2026-01-09 15:59:17,534 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 11:00:11] 2026-01-09 15:59:17,535 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 11:00:11] 2026-01-09 15:59:17,661 | INFO     | did not find any defunct processes belonging to 2666861
[2026-01-09 11:00:11] 2026-01-09 15:59:17,693 | INFO     | did not find any defunct processes belonging to 2666861
[2026-01-09 11:00:11] 2026-01-09 15:59:17,694 | INFO     | ready for new job
[2026-01-09 11:00:11] 2026-01-09 15:59:17,694 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 11:00:11] 2026-01-09 15:59:17,695 | INFO     | ***************************************
[2026-01-09 11:00:11] 2026-01-09 15:59:17,695 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 11:00:11] 2026-01-09 15:59:17,695 | INFO     | ***************************************
[2026-01-09 11:00:11] 2026-01-09 15:59:17,695 | INFO     | 
[2026-01-09 11:00:11] 2026-01-09 15:59:17,699 | INFO     | architecture information:
[2026-01-09 11:00:11] 2026-01-09 15:59:17,699 | INFO     | executing command: cat /etc/os-release
[2026-01-09 11:00:11] 2026-01-09 15:59:17,755 | INFO     | cat /etc/os-release:
[2026-01-09 11:00:11] NAME="CentOS Linux"
[2026-01-09 11:00:11] VERSION="7 (Core)"
[2026-01-09 11:00:11] ID="centos"
[2026-01-09 11:00:11] ID_LIKE="rhel fedora"
[2026-01-09 11:00:11] VERSION_ID="7"
[2026-01-09 11:00:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 11:00:11] ANSI_COLOR="0;31"
[2026-01-09 11:00:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 11:00:11] HOME_URL="https://www.centos.org/"
[2026-01-09 11:00:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 11:00:11] 
[2026-01-09 11:00:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 11:00:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 11:00:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 11:00:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 11:00:11] 
[2026-01-09 11:00:11] 2026-01-09 15:59:17,755 | INFO     | ***************************************
[2026-01-09 11:00:11] 2026-01-09 15:59:18,260 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2026-01-09 11:00:11] 2026-01-09 15:59:18,327 | INFO     | sufficient remaining disk space (169891332096 B)
[2026-01-09 11:00:11] 2026-01-09 15:59:18,327 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 11:00:11] 2026-01-09 15:59:18,327 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 11:00:11] 2026-01-09 15:59:18,327 | INFO     | update_server=False
[2026-01-09 11:00:11] 2026-01-09 15:59:18,327 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 11:00:11] 2026-01-09 15:59:18,327 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 11:00:11] 2026-01-09 15:59:18,366 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 11:00:11] 2026-01-09 15:59:18,588 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 11:00:11] 2026-01-09 15:59:18,588 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 11:00:11] 2026-01-09 15:59:18,588 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 11:00:11] 2026-01-09 15:59:18,588 | INFO     | will abort loop
[2026-01-09 11:00:11] 2026-01-09 15:59:18,611 | INFO     | all job control threads have been joined
[2026-01-09 11:00:11] 2026-01-09 15:59:18,612 | INFO     | all payload control threads have been joined
[2026-01-09 11:00:11] 2026-01-09 15:59:18,863 | INFO     | all data control threads have been joined
[2026-01-09 11:00:11] 2026-01-09 15:59:19,334 | INFO     | [job] retrieve thread has finished
[2026-01-09 11:00:11] 2026-01-09 15:59:19,340 | INFO     | [payload] validate_post thread has finished
[2026-01-09 11:00:11] 2026-01-09 15:59:19,420 | INFO     | [data] copytool_in thread has finished
[2026-01-09 11:00:11] 2026-01-09 15:59:19,439 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 11:00:11] 2026-01-09 15:59:19,595 | INFO     | [job] job monitor thread has finished
[2026-01-09 11:00:11] 2026-01-09 15:59:19,620 | INFO     | [job] control thread has finished
[2026-01-09 11:00:11] 2026-01-09 15:59:19,620 | INFO     | [payload] control thread has finished
[2026-01-09 11:00:11] 2026-01-09 15:59:19,621 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 11:00:11] 2026-01-09 15:59:19,869 | INFO     | [data] control thread has finished
[2026-01-09 11:00:11] 2026-01-09 15:59:19,980 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 11:00:11] 2026-01-09 15:59:20,095 | INFO     | [payload] failed_post thread has finished
[2026-01-09 11:00:11] 2026-01-09 15:59:20,391 | INFO     | [data] copytool_out thread has finished
[2026-01-09 11:00:11] 2026-01-09 15:59:20,555 | INFO     | [job] validate thread has finished
[2026-01-09 11:00:11] 2026-01-09 15:59:20,568 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 11:00:11] 2026-01-09 15:59:20,627 | INFO     | [job] queue monitor thread has finished
[2026-01-09 11:00:11] 2026-01-09 15:59:22,343 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 11:00:11] 2026-01-09 15:59:28,442 | INFO     | job.realtimelogging is not enabled
[2026-01-09 11:00:11] 2026-01-09 15:59:29,448 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 11:00:11] 2026-01-09 15:59:36,352 | INFO     | [monitor] cgroup control has ended
[2026-01-09 11:00:11] 2026-01-09 15:59:36,479 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140564055668544)>', '<ExcThread(monitor, started 140563173062400)>']
[2026-01-09 11:00:11] 2026-01-09 15:59:41,507 | INFO     | all workflow threads have been joined
[2026-01-09 11:00:11] 2026-01-09 15:59:41,507 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 11:00:11] 2026-01-09 15:59:41,507 | INFO     | traces error code: 0
[2026-01-09 11:00:11] 2026-01-09 15:59:41,507 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 11:00:11] 2026-01-09 15:59:49,124 | INFO     | PID=2639022 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 11:00:11] 2026-01-09 15:59:49,144 | INFO     | .. there are 39 such processes running
[2026-01-09 11:00:11] 2026-01-09 15:59:49,144 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 11:00:11] 2026-01-09 15:59:49,144 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 11:00:11] 2026-01-09 15:59:49,144 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 11:00:11] 2026-01-09 15:59:49,144 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 11:00:11] 2026-01-09 15:59:49,145 | INFO     | [monitor] control thread has ended
[2026-01-09 11:00:11] 2026-01-09 15:59:49,302 [wrapper] ==== pilot stdout END ====
[2026-01-09 11:00:11] 2026-01-09 15:59:49,399 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 11:00:11] 2026-01-09 15:59:49,427 [wrapper] pilotpid: 2639022
[2026-01-09 11:00:11] 2026-01-09 15:59:49,526 [wrapper] Pilot exit status: 0
[2026-01-09 11:00:11] 2026-01-09 15:59:49,717 [wrapper] pandaids: 6963148851
[2026-01-09 11:00:11] 2026-01-09 15:59:50,326 [wrapper] cleanup supervisor_pilot 4131718 2639023
[2026-01-09 11:00:11] 2026-01-09 15:59:50,363 [wrapper] Test setup, not cleaning
[2026-01-09 11:00:11] 2026-01-09 15:59:50,411 [wrapper] apfmon messages muted
[2026-01-09 11:00:11] 2026-01-09 15:59:50,453 [wrapper] ==== wrapper stdout END ====
[2026-01-09 11:00:11] 2026-01-09 15:59:50,495 [wrapper] ==== wrapper stderr END ====
[2026-01-09 11:00:11]  *** Error codes and diagnostics ***
[2026-01-09 11:00:11]     "exeErrorCode": 0,
[2026-01-09 11:00:11]     "exeErrorDiag": "",
[2026-01-09 11:00:11]     "pilotErrorCode": 0,
[2026-01-09 11:00:11]     "pilotErrorDiag": "",
[2026-01-09 11:00:11]  *** Listing of results directory ***
[2026-01-09 11:00:11] total 434268
[2026-01-09 11:00:11] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 11:02 queuedata.json
[2026-01-09 11:00:11] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 11:02 pilot3.tar.gz
[2026-01-09 11:00:11] -rwx------. 1 boincer umatlas     36322 Jan  8 11:02 runpilot2-wrapper.sh
[2026-01-09 11:00:11] -rw-r--r--. 1 boincer umatlas       100 Jan  9 08:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 11:00:11] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 08:37 run_atlas
[2026-01-09 11:00:11] -rw-r--r--. 1 boincer umatlas       105 Jan  9 08:37 job.xml
[2026-01-09 11:00:11] -rw-r--r--. 2 boincer umatlas 224637271 Jan  9 08:37 EVNT.47898824._001113.pool.root.1
[2026-01-09 11:00:11] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 08:37 shared
[2026-01-09 11:00:11] -rw-r--r--. 2 boincer umatlas    592392 Jan  9 08:37 input.tar.gz
[2026-01-09 11:00:11] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 08:37 start_atlas.sh
[2026-01-09 11:00:11] -rw-r--r--. 1 boincer umatlas         0 Jan  9 08:37 boinc_lockfile
[2026-01-09 11:00:11] -rw-r--r--. 1 boincer umatlas      2519 Jan  9 08:37 pandaJob.out
[2026-01-09 11:00:11] -rw-------. 1 boincer umatlas        57 Jan  9 08:37 setup.sh.local
[2026-01-09 11:00:11] -rw-------. 1 boincer umatlas    989377 Jan  9 08:38 agis_schedconf.cvmfs.json
[2026-01-09 11:00:11] -rw-------. 1 boincer umatlas   1516240 Jan  9 08:38 agis_ddmendpoints.agis.ALL.json
[2026-01-09 11:00:11] drwx------. 5 boincer umatlas      4096 Jan  9 08:38 pilot3
[2026-01-09 11:00:11] -rw-r--r--. 1 boincer umatlas      7172 Jan  9 10:57 init_data.xml
[2026-01-09 11:00:11] -rw-------. 1 boincer umatlas 213247402 Jan  9 10:57 HITS.47898826._028199.pool.root.1
[2026-01-09 11:00:11] -rw-r--r--. 1 boincer umatlas       529 Jan  9 10:57 boinc_task_state.xml
[2026-01-09 11:00:11] -rw-------. 1 boincer umatlas      1052 Jan  9 10:58 memory_monitor_summary.json
[2026-01-09 11:00:11] -rw-------. 1 boincer umatlas    360331 Jan  9 10:58 log.47898826._028199.job.log.tgz.1
[2026-01-09 11:00:11] -rw-------. 1 boincer umatlas      7812 Jan  9 10:59 heartbeat.json
[2026-01-09 11:00:11] -rw-------. 1 boincer umatlas        95 Jan  9 10:59 pilot_heartbeat.json
[2026-01-09 11:00:11] -rw-------. 1 boincer umatlas       823 Jan  9 10:59 pilotlog.txt
[2026-01-09 11:00:11] -rw-------. 1 boincer umatlas   1089444 Jan  9 10:59 log.47898826._028199.job.log.1
[2026-01-09 11:00:11] -rw-------. 1 boincer umatlas       357 Jan  9 10:59 output.list
[2026-01-09 11:00:11] -rw-r--r--. 1 boincer umatlas       620 Jan  9 10:59 runtime_log
[2026-01-09 11:00:11] -rw-------. 1 boincer umatlas   1464320 Jan  9 10:59 result.tar.gz
[2026-01-09 11:00:11] -rw-r--r--. 1 boincer umatlas      9332 Jan  9 10:59 runtime_log.err
[2026-01-09 11:00:11] -rw-------. 1 boincer umatlas       655 Jan  9 10:59 q8iKDm5d7x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmoqkKDmCu1vJn.diag
[2026-01-09 11:00:11] -rw-r--r--. 1 boincer umatlas        27 Jan  9 11:00 wrapper_checkpoint.txt
[2026-01-09 11:00:11] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 11:00 boinc_mmap_file
[2026-01-09 11:00:11] -rw-r--r--. 1 boincer umatlas     21454 Jan  9 11:00 stderr.txt
[2026-01-09 11:00:11] HITS file was successfully produced:
[2026-01-09 11:00:11] -rw-------. 1 boincer umatlas 213247402 Jan  9 10:57 shared/HITS.pool.root.1
[2026-01-09 11:00:11]  *** Contents of shared directory: ***
[2026-01-09 11:00:11] total 429660
[2026-01-09 11:00:11] -rw-r--r--. 2 boincer umatlas 224637271 Jan  9 08:37 ATLAS.root_0
[2026-01-09 11:00:11] -rw-r--r--. 2 boincer umatlas    592392 Jan  9 08:37 input.tar.gz
[2026-01-09 11:00:11] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 08:37 start_atlas.sh
[2026-01-09 11:00:11] -rw-------. 1 boincer umatlas 213247402 Jan  9 10:57 HITS.pool.root.1
[2026-01-09 11:00:11] -rw-------. 1 boincer umatlas   1464320 Jan  9 10:59 result.tar.gz
11:00:12 (2626490): run_atlas exited; CPU time 31858.059715
11:00:12 (2626490): called boinc_finish(0)

</stderr_txt>
]]>

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