Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
04:51:12 (1820578): wrapper (7.7.26015): starting
04:51:12 (1820578): wrapper: running run_atlas (--nthreads 3)
[2026-01-10 04:51:12] Arguments: --nthreads 3
[2026-01-10 04:51:12] Threads: 3
[2026-01-10 04:51:12] Checking for CVMFS
[2026-01-10 04:51:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 04:51:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 04:51:12] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 04:51:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 04:51:12] 2.9.2.0 1523556 1265 82940 154966 1 57 36402010 36864000 0 130560 0 810240 99.988 46602 15638 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-10 04:51:12] CVMFS is ok
[2026-01-10 04:51:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 04:51:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 04:51:12] Further information can be found at the LHC@home message board.
[2026-01-10 04:51:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 04:51:12] Checking for apptainer binary...
[2026-01-10 04:51:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 04:51:12] Running /usr/bin/apptainer --version
[2026-01-10 04:51:12] apptainer version 1.4.1-1.1
[2026-01-10 04:51:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 04:51:12] itA179
[2026-01-10 04:51:12] apptainer works
[2026-01-10 04:51:12] Set ATHENA_PROC_NUMBER=3
[2026-01-10 04:51:12] Set ATHENA_CORE_NUMBER=3
[2026-01-10 04:51:12] Starting ATLAS job with PandaID=6963152516
[2026-01-10 04:51:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 06:44:49]  *** The last 200 lines of the pilot log: ***
[2026-01-10 06:44:49] 2026-01-10 05:44:13,298 | INFO     | total number of processed events: 400 (read)
[2026-01-10 06:44:49] 2026-01-10 05:44:13,299 | INFO     | executing command: lscpu
[2026-01-10 06:44:49] 2026-01-10 05:44:13,313 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 06:44:49] 2026-01-10 05:44:13,717 | INFO     | monitor loop #519: job 0:6963152516 is in state 'finished'
[2026-01-10 06:44:49] 2026-01-10 05:44:13,717 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 06:44:49] 2026-01-10 05:44:14,329 | INFO     | time since job start (6776s) is within the limit (349056.0s)
[2026-01-10 06:44:49] 2026-01-10 05:44:16,220 | INFO     | monitor loop #520: job 0:6963152516 is in state 'finished'
[2026-01-10 06:44:49] 2026-01-10 05:44:16,220 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 06:44:49] 2026-01-10 05:44:16,334 | INFO     | time since job start (6778s) is within the limit (349056.0s)
[2026-01-10 06:44:49] 2026-01-10 05:44:17,502 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 06:44:49] 2026-01-10 05:44:17,503 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3779.902583333334
[2026-01-10 06:44:49] 2026-01-10 05:44:17,504 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6963152516/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 06:44:49] 2026-01-10 05:44:17,505 | INFO     | extracted standard info from prmon json
[2026-01-10 06:44:49] 2026-01-10 05:44:17,505 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 06:44:49] 2026-01-10 05:44:17,505 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 06:44:49] 2026-01-10 05:44:17,505 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 06:44:49] 2026-01-10 05:44:17,505 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 06:44:49] 2026-01-10 05:44:17,506 | INFO     | fitting pss+swap vs Time
[2026-01-10 06:44:49] 2026-01-10 05:44:17,506 | INFO     | sum of square deviations: 424045160.0
[2026-01-10 06:44:49] 2026-01-10 05:44:17,506 | INFO     | sum of deviations: 334738842.00000167
[2026-01-10 06:44:49] 2026-01-10 05:44:17,506 | INFO     | mean x: 1768020452.0
[2026-01-10 06:44:49] 2026-01-10 05:44:17,506 | INFO     | mean y: 2379661.5405405406
[2026-01-10 06:44:49] 2026-01-10 05:44:17,506 | INFO     | intersect: -1393285646.217717
[2026-01-10 06:44:49] 2026-01-10 05:44:17,506 | INFO     | chi2: 1.6015965430284294
[2026-01-10 06:44:49] 2026-01-10 05:44:17,506 | INFO     | sum of square deviations: 369281342.5
[2026-01-10 06:44:49] 2026-01-10 05:44:17,507 | INFO     | sum of deviations: 487149049.99999446
[2026-01-10 06:44:49] 2026-01-10 05:44:17,507 | INFO     | mean x: 1768020299.5
[2026-01-10 06:44:49] 2026-01-10 05:44:17,507 | INFO     | mean y: 2380086.3018867923
[2026-01-10 06:44:49] 2026-01-10 05:44:17,507 | INFO     | intersect: -2329959271.682685
[2026-01-10 06:44:49] 2026-01-10 05:44:17,507 | INFO     | chi2: 1.602905498369751
[2026-01-10 06:44:49] 2026-01-10 05:44:17,507 | INFO     | current chi2=1.602905498369751 (change=-0.08172815725779566 %)
[2026-01-10 06:44:49] 2026-01-10 05:44:17,507 | INFO     | right removable region: 105
[2026-01-10 06:44:49] 2026-01-10 05:44:17,507 | INFO     | sum of square deviations: 369281342.5
[2026-01-10 06:44:49] 2026-01-10 05:44:17,507 | INFO     | sum of deviations: -12688523288.5
[2026-01-10 06:44:49] 2026-01-10 05:44:17,507 | INFO     | mean x: 1768020604.5
[2026-01-10 06:44:49] 2026-01-10 05:44:17,507 | INFO     | mean y: 2414838.1603773586
[2026-01-10 06:44:49] 2026-01-10 05:44:17,507 | INFO     | intersect: 60751681137.05577
[2026-01-10 06:44:49] 2026-01-10 05:44:17,507 | INFO     | chi2: 0.14983183216778573
[2026-01-10 06:44:49] 2026-01-10 05:44:17,507 | INFO     | current chi2=0.14983183216778573 (change=90.64484543126751 %)
[2026-01-10 06:44:49] 2026-01-10 05:44:17,507 | INFO     | sum of square deviations: 319447850.0
[2026-01-10 06:44:49] 2026-01-10 05:44:17,507 | INFO     | sum of deviations: -7778359063.0
[2026-01-10 06:44:49] 2026-01-10 05:44:17,507 | INFO     | mean x: 1768020757.0
[2026-01-10 06:44:49] 2026-01-10 05:44:17,507 | INFO     | mean y: 2399794.2574257427
[2026-01-10 06:44:49] 2026-01-10 05:44:17,507 | INFO     | intersect: 43052619975.05711
[2026-01-10 06:44:49] 2026-01-10 05:44:17,508 | INFO     | chi2: 0.11379107252996008
[2026-01-10 06:44:49] 2026-01-10 05:44:17,508 | INFO     | current chi2=0.11379107252996008 (change=24.05414064313532 %)
[2026-01-10 06:44:49] 2026-01-10 05:44:17,508 | INFO     | left removable region: 20
[2026-01-10 06:44:49] 2026-01-10 05:44:17,508 | INFO     | sum of square deviations: 190403570.0
[2026-01-10 06:44:49] 2026-01-10 05:44:17,508 | INFO     | sum of deviations: 376345783.0
[2026-01-10 06:44:49] 2026-01-10 05:44:17,508 | INFO     | mean x: 1768020879.0
[2026-01-10 06:44:49] 2026-01-10 05:44:17,508 | INFO     | mean y: 2371215.564705882
[2026-01-10 06:44:49] 2026-01-10 05:44:17,508 | INFO     | intersect: -3492243943.529229
[2026-01-10 06:44:49] 2026-01-10 05:44:17,508 | INFO     | chi2: 0.011400511905536571
[2026-01-10 06:44:49] 2026-01-10 05:44:17,508 | INFO     | current memory leak: 1.98 B/s (using 85 data points, chi2=0.01)
[2026-01-10 06:44:49] 2026-01-10 05:44:17,508 | INFO     | could have reported an average CPU frequency of 3816 MHz (7 samples)
[2026-01-10 06:44:49] 2026-01-10 05:44:17,508 | INFO     | ..............................
[2026-01-10 06:44:49] 2026-01-10 05:44:17,508 | INFO     | . Timing measurements:
[2026-01-10 06:44:49] 2026-01-10 05:44:17,508 | INFO     | . get job = 0 s
[2026-01-10 06:44:49] 2026-01-10 05:44:17,508 | INFO     | . initial setup = 1 s
[2026-01-10 06:44:49] 2026-01-10 05:44:17,508 | INFO     | . payload setup = 2 s
[2026-01-10 06:44:49] 2026-01-10 05:44:17,508 | INFO     | . stage-in = 0 s
[2026-01-10 06:44:49] 2026-01-10 05:44:17,508 | INFO     | . payload execution = 6750 s
[2026-01-10 06:44:49] 2026-01-10 05:44:17,508 | INFO     | . stage-out = 0 s
[2026-01-10 06:44:49] 2026-01-10 05:44:17,508 | INFO     | . log creation = 0 s
[2026-01-10 06:44:49] 2026-01-10 05:44:17,508 | INFO     | ..............................
[2026-01-10 06:44:49] 2026-01-10 05:44:17,984 | INFO     | 
[2026-01-10 06:44:49] 2026-01-10 05:44:17,984 | INFO     | job summary report
[2026-01-10 06:44:49] 2026-01-10 05:44:17,984 | INFO     | --------------------------------------------------
[2026-01-10 06:44:49] 2026-01-10 05:44:17,984 | INFO     | PanDA job id: 6963152516
[2026-01-10 06:44:49] 2026-01-10 05:44:17,984 | INFO     | task id: 47898826
[2026-01-10 06:44:49] 2026-01-10 05:44:17,984 | INFO     | errors: (none)
[2026-01-10 06:44:49] 2026-01-10 05:44:17,984 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 06:44:49] 2026-01-10 05:44:17,984 | INFO     | pilot state: finished 
[2026-01-10 06:44:49] 2026-01-10 05:44:17,984 | INFO     | transexitcode: 0
[2026-01-10 06:44:49] 2026-01-10 05:44:17,984 | INFO     | exeerrorcode: 0
[2026-01-10 06:44:49] 2026-01-10 05:44:17,984 | INFO     | exeerrordiag: 
[2026-01-10 06:44:49] 2026-01-10 05:44:17,984 | INFO     | exitcode: 0
[2026-01-10 06:44:49] 2026-01-10 05:44:17,984 | INFO     | exitmsg: OK
[2026-01-10 06:44:49] 2026-01-10 05:44:17,984 | INFO     | cpuconsumptiontime: 19544 s
[2026-01-10 06:44:49] 2026-01-10 05:44:17,984 | INFO     | nevents: 400
[2026-01-10 06:44:49] 2026-01-10 05:44:17,984 | INFO     | neventsw: 0
[2026-01-10 06:44:49] 2026-01-10 05:44:17,984 | INFO     | pid: 1830743
[2026-01-10 06:44:49] 2026-01-10 05:44:17,984 | INFO     | pgrp: 1830743
[2026-01-10 06:44:49] 2026-01-10 05:44:17,984 | INFO     | corecount: 3
[2026-01-10 06:44:49] 2026-01-10 05:44:17,984 | INFO     | event service: False
[2026-01-10 06:44:49] 2026-01-10 05:44:17,984 | INFO     | sizes: {0: 2283969, 3: 2284231, 11: 2284259, 6757: 2311580, 6758: 2320584, 6761: 2320640, 6766: 2320962}
[2026-01-10 06:44:49] 2026-01-10 05:44:17,985 | INFO     | --------------------------------------------------
[2026-01-10 06:44:49] 2026-01-10 05:44:17,985 | INFO     | 
[2026-01-10 06:44:49] 2026-01-10 05:44:17,985 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-01-10 06:44:49] 2026-01-10 05:44:17,998 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 06:44:49] 2026-01-10 05:44:17,998 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 06:44:49] 2026-01-10 05:44:17,998 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 06:44:49] 2026-01-10 05:44:17,998 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 06:44:49] 2026-01-10 05:44:17,998 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 06:44:49] 2026-01-10 05:44:17,998 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 06:44:49] 2026-01-10 05:44:17,998 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 06:44:49] 2026-01-10 05:44:17,998 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 06:44:49] 2026-01-10 05:44:17,998 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 06:44:49] 2026-01-10 05:44:17,998 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 06:44:49] 2026-01-10 05:44:17,998 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 06:44:49] 2026-01-10 05:44:17,998 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 06:44:49] 2026-01-10 05:44:17,998 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 06:44:49] 2026-01-10 05:44:17,998 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 06:44:49] 2026-01-10 05:44:17,999 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 06:44:49] 2026-01-10 05:44:17,999 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 06:44:49] 2026-01-10 05:44:17,999 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 06:44:49] 2026-01-10 05:44:17,999 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 06:44:49] 2026-01-10 05:44:17,999 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 06:44:49] 2026-01-10 05:44:17,999 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 06:44:49] 2026-01-10 05:44:17,999 | INFO     | job 6963152516 has completed (purged errors)
[2026-01-10 06:44:49] 2026-01-10 05:44:17,999 | INFO     | overall cleanup function is called
[2026-01-10 06:44:49] 2026-01-10 05:44:19,005 | INFO     | --- collectZombieJob: --- 10, [1830743]
[2026-01-10 06:44:49] 2026-01-10 05:44:19,006 | INFO     | zombie collector waiting for pid 1830743
[2026-01-10 06:44:49] 2026-01-10 05:44:19,006 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 06:44:49] 2026-01-10 05:44:19,006 | INFO     | collected zombie processes
[2026-01-10 06:44:49] 2026-01-10 05:44:19,006 | INFO     | will attempt to kill all subprocesses of pid=1830743
[2026-01-10 06:44:49] 2026-01-10 05:44:19,049 | INFO     | process IDs to be killed: [1830743] (in reverse order)
[2026-01-10 06:44:49] 2026-01-10 05:44:19,073 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 06:44:49] 2026-01-10 05:44:19,073 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 06:44:49] 2026-01-10 05:44:19,074 | INFO     | did not find any defunct processes belonging to 1830743
[2026-01-10 06:44:49] 2026-01-10 05:44:19,075 | INFO     | did not find any defunct processes belonging to 1830743
[2026-01-10 06:44:49] 2026-01-10 05:44:19,075 | INFO     | ready for new job
[2026-01-10 06:44:49] 2026-01-10 05:44:19,075 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 06:44:49] 2026-01-10 05:44:19,076 | INFO     | ***************************************
[2026-01-10 06:44:49] 2026-01-10 05:44:19,076 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 06:44:49] 2026-01-10 05:44:19,076 | INFO     | ***************************************
[2026-01-10 06:44:49] 2026-01-10 05:44:19,076 | INFO     | 
[2026-01-10 06:44:49] 2026-01-10 05:44:19,077 | INFO     | architecture information:
[2026-01-10 06:44:49] 2026-01-10 05:44:19,077 | INFO     | executing command: cat /etc/os-release
[2026-01-10 06:44:49] 2026-01-10 05:44:19,086 | INFO     | cat /etc/os-release:
[2026-01-10 06:44:49] NAME="CentOS Linux"
[2026-01-10 06:44:49] VERSION="7 (Core)"
[2026-01-10 06:44:49] ID="centos"
[2026-01-10 06:44:49] ID_LIKE="rhel fedora"
[2026-01-10 06:44:49] VERSION_ID="7"
[2026-01-10 06:44:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 06:44:49] ANSI_COLOR="0;31"
[2026-01-10 06:44:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 06:44:49] HOME_URL="https://www.centos.org/"
[2026-01-10 06:44:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 06:44:49] 
[2026-01-10 06:44:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 06:44:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 06:44:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 06:44:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 06:44:49] 
[2026-01-10 06:44:49] 2026-01-10 05:44:19,086 | INFO     | ***************************************
[2026-01-10 06:44:49] 2026-01-10 05:44:19,586 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-10 06:44:49] 2026-01-10 05:44:19,598 | INFO     | sufficient remaining disk space (123445706752 B)
[2026-01-10 06:44:49] 2026-01-10 05:44:19,598 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 06:44:49] 2026-01-10 05:44:19,598 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 06:44:49] 2026-01-10 05:44:19,598 | INFO     | update_server=False
[2026-01-10 06:44:49] 2026-01-10 05:44:19,598 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 06:44:49] 2026-01-10 05:44:19,598 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 06:44:49] 2026-01-10 05:44:19,729 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 06:44:49] 2026-01-10 05:44:19,729 | INFO     | aborting loop
[2026-01-10 06:44:49] 2026-01-10 05:44:19,909 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 06:44:49] 2026-01-10 05:44:20,217 | INFO     | all job control threads have been joined
[2026-01-10 06:44:49] 2026-01-10 05:44:20,503 | INFO     | all data control threads have been joined
[2026-01-10 06:44:49] 2026-01-10 05:44:20,593 | INFO     | all payload control threads have been joined
[2026-01-10 06:44:49] 2026-01-10 05:44:20,604 | INFO     | [job] retrieve thread has finished
[2026-01-10 06:44:49] 2026-01-10 05:44:20,642 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 06:44:49] 2026-01-10 05:44:20,707 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 06:44:49] 2026-01-10 05:44:20,730 | INFO     | [job] job monitor thread has finished
[2026-01-10 06:44:49] 2026-01-10 05:44:21,026 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 06:44:49] 2026-01-10 05:44:21,223 | INFO     | [job] control thread has finished
[2026-01-10 06:44:49] 2026-01-10 05:44:21,454 | INFO     | [payload] failed_post thread has finished
[2026-01-10 06:44:49] 2026-01-10 05:44:21,496 | INFO     | [data] copytool_in thread has finished
[2026-01-10 06:44:49] 2026-01-10 05:44:21,508 | INFO     | [data] control thread has finished
[2026-01-10 06:44:49] 2026-01-10 05:44:21,599 | INFO     | [payload] control thread has finished
[2026-01-10 06:44:49] 2026-01-10 05:44:21,915 | INFO     | [data] copytool_out thread has finished
[2026-01-10 06:44:49] 2026-01-10 05:44:21,980 | INFO     | [payload] validate_post thread has finished
[2026-01-10 06:44:49] 2026-01-10 05:44:22,047 | INFO     | [job] validate thread has finished
[2026-01-10 06:44:49] 2026-01-10 05:44:22,547 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 06:44:49] 2026-01-10 05:44:23,553 | INFO     | [job] queue monitor thread has finished
[2026-01-10 06:44:49] 2026-01-10 05:44:23,602 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 06:44:49] 2026-01-10 05:44:25,441 | INFO     | [monitor] cgroup control has ended
[2026-01-10 06:44:49] 2026-01-10 05:44:29,739 | INFO     | job.realtimelogging is not enabled
[2026-01-10 06:44:49] 2026-01-10 05:44:30,745 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 06:44:49] 2026-01-10 05:44:32,723 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139820524083008)>', '<ExcThread(monitor, started 139819866892032)>']
[2026-01-10 06:44:49] 2026-01-10 05:44:37,746 | INFO     | all workflow threads have been joined
[2026-01-10 06:44:49] 2026-01-10 05:44:37,746 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 06:44:49] 2026-01-10 05:44:37,746 | INFO     | traces error code: 0
[2026-01-10 06:44:49] 2026-01-10 05:44:37,746 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 06:44:49] 2026-01-10 05:44:49,434 | INFO     | PID=1824302 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 06:44:49] 2026-01-10 05:44:49,434 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 06:44:49] 2026-01-10 05:44:49,434 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 06:44:49] 2026-01-10 05:44:49,434 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 06:44:49] 2026-01-10 05:44:49,434 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 06:44:49] 2026-01-10 05:44:49,434 | INFO     | [monitor] control thread has ended
[2026-01-10 06:44:49] 2026-01-10 05:44:49,480 [wrapper] ==== pilot stdout END ====
[2026-01-10 06:44:49] 2026-01-10 05:44:49,482 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 06:44:49] 2026-01-10 05:44:49,484 [wrapper] pilotpid: 1824302
[2026-01-10 06:44:49] 2026-01-10 05:44:49,487 [wrapper] Pilot exit status: 0
[2026-01-10 06:44:49] 2026-01-10 05:44:49,494 [wrapper] pandaids: 6963152516
[2026-01-10 06:44:49] 2026-01-10 05:44:49,509 [wrapper] cleanup supervisor_pilot 1845120 1824303
[2026-01-10 06:44:49] 2026-01-10 05:44:49,511 [wrapper] Test setup, not cleaning
[2026-01-10 06:44:49] 2026-01-10 05:44:49,513 [wrapper] apfmon messages muted
[2026-01-10 06:44:49] 2026-01-10 05:44:49,516 [wrapper] ==== wrapper stdout END ====
[2026-01-10 06:44:49] 2026-01-10 05:44:49,518 [wrapper] ==== wrapper stderr END ====
[2026-01-10 06:44:49]  *** Error codes and diagnostics ***
[2026-01-10 06:44:49]     "exeErrorCode": 0,
[2026-01-10 06:44:49]     "exeErrorDiag": "",
[2026-01-10 06:44:49]     "pilotErrorCode": 0,
[2026-01-10 06:44:49]     "pilotErrorDiag": "",
[2026-01-10 06:44:49]  *** Listing of results directory ***
[2026-01-10 06:44:49] total 444600
[2026-01-10 06:44:49] -rw-r--r-- 1 boinc boinc    579449 Jan  8 17:02 pilot3.tar.gz
[2026-01-10 06:44:49] -rwx------ 1 boinc boinc     36322 Jan  8 17:04 runpilot2-wrapper.sh
[2026-01-10 06:44:49] -rw-r--r-- 1 boinc boinc      5112 Jan  8 17:04 queuedata.json
[2026-01-10 06:44:49] -rw-r--r-- 1 boinc boinc       100 Jan 10 04:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 06:44:49] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 04:51 run_atlas
[2026-01-10 06:44:49] -rw-r--r-- 1 boinc boinc       105 Jan 10 04:51 job.xml
[2026-01-10 06:44:49] -rw-r--r-- 2 boinc boinc 227415352 Jan 10 04:51 EVNT.47898824._000872.pool.root.1
[2026-01-10 06:44:49] -rw-r--r-- 2 boinc boinc    592387 Jan 10 04:51 input.tar.gz
[2026-01-10 06:44:49] -rw-r--r-- 2 boinc boinc     15847 Jan 10 04:51 start_atlas.sh
[2026-01-10 06:44:49] drwxrwx--x 2 boinc boinc      4096 Jan 10 04:51 shared
[2026-01-10 06:44:49] -rw-r--r-- 1 boinc boinc         0 Jan 10 04:51 boinc_setup_complete
[2026-01-10 06:44:49] -rw-r--r-- 1 boinc boinc      6441 Jan 10 04:51 init_data.xml
[2026-01-10 06:44:49] -rw-r--r-- 1 boinc boinc         0 Jan 10 04:51 boinc_lockfile
[2026-01-10 06:44:49] -rw-r--r-- 1 boinc boinc      2517 Jan 10 04:51 pandaJob.out
[2026-01-10 06:44:49] -rw------- 1 boinc boinc    989374 Jan 10 04:51 agis_schedconf.cvmfs.json
[2026-01-10 06:44:49] -rw------- 1 boinc boinc   1516240 Jan 10 04:51 agis_ddmendpoints.agis.ALL.json
[2026-01-10 06:44:49] drwx------ 5 boinc boinc      4096 Jan 10 04:51 pilot3
[2026-01-10 06:44:49] -rw------- 1 boinc boinc 221459870 Jan 10 06:43 HITS.47898826._029274.pool.root.1
[2026-01-10 06:44:49] -rw-r--r-- 1 boinc boinc       529 Jan 10 06:43 boinc_task_state.xml
[2026-01-10 06:44:49] -rw------- 1 boinc boinc        95 Jan 10 06:43 pilot_heartbeat.json
[2026-01-10 06:44:49] -rw------- 1 boinc boinc      1024 Jan 10 06:44 memory_monitor_summary.json
[2026-01-10 06:44:49] -rw------- 1 boinc boinc    263460 Jan 10 06:44 log.47898826._029274.job.log.tgz.1
[2026-01-10 06:44:49] -rw------- 1 boinc boinc      7759 Jan 10 06:44 heartbeat.json
[2026-01-10 06:44:49] -rw-r--r-- 1 boinc boinc        27 Jan 10 06:44 wrapper_checkpoint.txt
[2026-01-10 06:44:49] -rw------- 1 boinc boinc       747 Jan 10 06:44 pilotlog.txt
[2026-01-10 06:44:49] -rw------- 1 boinc boinc    977975 Jan 10 06:44 log.47898826._029274.job.log.1
[2026-01-10 06:44:49] -rw------- 1 boinc boinc       357 Jan 10 06:44 output.list
[2026-01-10 06:44:49] -rw-r--r-- 1 boinc boinc       620 Jan 10 06:44 runtime_log
[2026-01-10 06:44:49] -rw------- 1 boinc boinc   1259520 Jan 10 06:44 result.tar.gz
[2026-01-10 06:44:49] -rw-r--r-- 1 boinc boinc      8192 Jan 10 06:44 boinc_mmap_file
[2026-01-10 06:44:49] -rw-r--r-- 1 boinc boinc      8897 Jan 10 06:44 runtime_log.err
[2026-01-10 06:44:49] -rw------- 1 boinc boinc       659 Jan 10 06:44 ObWLDmgf7x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmXkfKDmCeVaDm.diag
[2026-01-10 06:44:49] -rw-r--r-- 1 boinc boinc     21324 Jan 10 06:44 stderr.txt
[2026-01-10 06:44:49] HITS file was successfully produced:
[2026-01-10 06:44:49] -rw------- 1 boinc boinc 221459870 Jan 10 06:43 shared/HITS.pool.root.1
[2026-01-10 06:44:49]  *** Contents of shared directory: ***
[2026-01-10 06:44:49] total 440196
[2026-01-10 06:44:49] -rw-r--r-- 2 boinc boinc 227415352 Jan 10 04:51 ATLAS.root_0
[2026-01-10 06:44:49] -rw-r--r-- 2 boinc boinc    592387 Jan 10 04:51 input.tar.gz
[2026-01-10 06:44:49] -rw-r--r-- 2 boinc boinc     15847 Jan 10 04:51 start_atlas.sh
[2026-01-10 06:44:49] -rw------- 1 boinc boinc 221459870 Jan 10 06:43 HITS.pool.root.1
[2026-01-10 06:44:49] -rw------- 1 boinc boinc   1259520 Jan 10 06:44 result.tar.gz
06:45:10 (1820578): run_atlas exited; CPU time 19571.038403
06:45:10 (1820578): called boinc_finish(0)

</stderr_txt>
]]>

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