Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:54:50 (4540): wrapper (7.7.26015): starting
16:54:50 (4540): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 16:54:50] Arguments: --nthreads 8
[2026-01-09 16:54:50] Threads: 8
[2026-01-09 16:54:50] Checking for CVMFS
[2026-01-09 16:54:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 16:54:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 16:54:50] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 16:54:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 16:54:50] 2.11.2.0 24663 35624 93096 154948 1 57 17230778 25165824 0 130560 0 16315319 99.815 11211146 2781 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 16:54:50] CVMFS is ok
[2026-01-09 16:54:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 16:54:50] Checking for apptainer binary...
[2026-01-09 16:54:50] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 16:54:50] Running /usr/bin/apptainer --version
[2026-01-09 16:54:50] apptainer version 1.3.2-1.el7
[2026-01-09 16:54:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 16:54:52] cg-vwn475.simple-grid.lan
[2026-01-09 16:54:52] apptainer works
[2026-01-09 16:54:52] Set ATHENA_PROC_NUMBER=8
[2026-01-09 16:54:52] Set ATHENA_CORE_NUMBER=8
[2026-01-09 16:54:52] Starting ATLAS job with PandaID=6963162284
[2026-01-09 16:54:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/18 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 19:26:28]  *** The last 200 lines of the pilot log: ***
[2026-01-09 19:26:28] 2026-01-09 18:25:36,177 | INFO     | time since job start (9028s) is within the limit (349056.0s)
[2026-01-09 19:26:28] 2026-01-09 18:25:37,974 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 19:26:28] 2026-01-09 18:25:37,975 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2026-01-09 19:26:28] 2026-01-09 18:25:37,977 | INFO     | using path: /var/lib/boinc/slots/18/PanDA_Pilot-6963162284/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 19:26:28] 2026-01-09 18:25:37,978 | INFO     | extracted standard info from prmon json
[2026-01-09 19:26:28] 2026-01-09 18:25:37,978 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 19:26:28] 2026-01-09 18:25:37,978 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 19:26:28] 2026-01-09 18:25:37,979 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 19:26:28] 2026-01-09 18:25:37,979 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 19:26:28] 2026-01-09 18:25:37,982 | INFO     | fitting pss+swap vs Time
[2026-01-09 19:26:28] 2026-01-09 18:25:37,982 | INFO     | sum of square deviations: 1005179777.0
[2026-01-09 19:26:28] 2026-01-09 18:25:37,983 | INFO     | sum of deviations: 4460069350.999996
[2026-01-09 19:26:28] 2026-01-09 18:25:37,984 | INFO     | mean x: 1767978625.5
[2026-01-09 19:26:28] 2026-01-09 18:25:37,984 | INFO     | mean y: 2475686.3378378376
[2026-01-09 19:26:28] 2026-01-09 18:25:37,984 | INFO     | intersect: -7842197934.484172
[2026-01-09 19:26:28] 2026-01-09 18:25:37,984 | INFO     | chi2: 2.299959680646271
[2026-01-09 19:26:28] 2026-01-09 18:25:37,984 | INFO     | sum of square deviations: 906703512.0
[2026-01-09 19:26:28] 2026-01-09 18:25:37,985 | INFO     | sum of deviations: 13848788763.999998
[2026-01-09 19:26:28] 2026-01-09 18:25:37,986 | INFO     | mean x: 1767978473.0
[2026-01-09 19:26:28] 2026-01-09 18:25:37,986 | INFO     | mean y: 2489812.048951049
[2026-01-09 19:26:28] 2026-01-09 18:25:37,986 | INFO     | intersect: -27001222082.557976
[2026-01-09 19:26:28] 2026-01-09 18:25:37,986 | INFO     | chi2: 1.5391925725421958
[2026-01-09 19:26:28] 2026-01-09 18:25:37,986 | INFO     | current chi2=1.5391925725421958 (change=33.07741063922936 %)
[2026-01-09 19:26:28] 2026-01-09 18:25:37,987 | INFO     | sum of square deviations: 814878534.5
[2026-01-09 19:26:28] 2026-01-09 18:25:37,987 | INFO     | sum of deviations: 13345305713.499987
[2026-01-09 19:26:28] 2026-01-09 18:25:37,988 | INFO     | mean x: 1767978320.5
[2026-01-09 19:26:28] 2026-01-09 18:25:37,988 | INFO     | mean y: 2488975.5579710146
[2026-01-09 19:26:28] 2026-01-09 18:25:37,988 | INFO     | intersect: -28951778664.330093
[2026-01-09 19:26:28] 2026-01-09 18:25:37,988 | INFO     | chi2: 1.5412713166415277
[2026-01-09 19:26:28] 2026-01-09 18:25:37,988 | INFO     | current chi2=1.5412713166415277 (change=-0.13505419246524888 %)
[2026-01-09 19:26:28] 2026-01-09 18:25:37,988 | INFO     | right removable region: 137
[2026-01-09 19:26:28] 2026-01-09 18:25:37,989 | INFO     | sum of square deviations: 906703512.0
[2026-01-09 19:26:28] 2026-01-09 18:25:37,990 | INFO     | sum of deviations: -16995992508.000002
[2026-01-09 19:26:28] 2026-01-09 18:25:37,990 | INFO     | mean x: 1767978778.0
[2026-01-09 19:26:28] 2026-01-09 18:25:37,990 | INFO     | mean y: 2508364.6503496505
[2026-01-09 19:26:28] 2026-01-09 18:25:37,990 | INFO     | intersect: 33142949167.521088
[2026-01-09 19:26:28] 2026-01-09 18:25:37,990 | INFO     | chi2: 0.8797064131112307
[2026-01-09 19:26:28] 2026-01-09 18:25:37,990 | INFO     | current chi2=0.8797064131112307 (change=61.75122457520473 %)
[2026-01-09 19:26:28] 2026-01-09 18:25:37,991 | INFO     | sum of square deviations: 814878534.5
[2026-01-09 19:26:28] 2026-01-09 18:25:37,992 | INFO     | sum of deviations: -14893735569.5
[2026-01-09 19:26:28] 2026-01-09 18:25:37,992 | INFO     | mean x: 1767978930.5
[2026-01-09 19:26:28] 2026-01-09 18:25:37,992 | INFO     | mean y: 2504771.992753623
[2026-01-09 19:26:28] 2026-01-09 18:25:37,992 | INFO     | intersect: 32316290898.990578
[2026-01-09 19:26:28] 2026-01-09 18:25:37,992 | INFO     | chi2: 0.860502037005314
[2026-01-09 19:26:28] 2026-01-09 18:25:37,992 | INFO     | current chi2=0.860502037005314 (change=2.183043776843357 %)
[2026-01-09 19:26:28] 2026-01-09 18:25:37,992 | INFO     | left removable region: 20
[2026-01-09 19:26:28] 2026-01-09 18:25:37,993 | INFO     | sum of square deviations: 496597218.0
[2026-01-09 19:26:28] 2026-01-09 18:25:37,993 | INFO     | sum of deviations: 1397785171.0
[2026-01-09 19:26:28] 2026-01-09 18:25:37,994 | INFO     | mean x: 1767978900.0
[2026-01-09 19:26:28] 2026-01-09 18:25:37,994 | INFO     | mean y: 2507028.6153846155
[2026-01-09 19:26:28] 2026-01-09 18:25:37,994 | INFO     | intersect: -4973869397.764216
[2026-01-09 19:26:28] 2026-01-09 18:25:37,994 | INFO     | chi2: 8.789133695418367e-05
[2026-01-09 19:26:28] 2026-01-09 18:25:37,994 | INFO     | current memory leak: 2.81 B/s (using 117 data points, chi2=0.00)
[2026-01-09 19:26:28] 2026-01-09 18:25:37,995 | INFO     | could have reported an average CPU frequency of 2249 MHz (8 samples)
[2026-01-09 19:26:28] 2026-01-09 18:25:37,995 | INFO     | ..............................
[2026-01-09 19:26:28] 2026-01-09 18:25:37,995 | INFO     | . Timing measurements:
[2026-01-09 19:26:28] 2026-01-09 18:25:37,995 | INFO     | . get job = 0 s
[2026-01-09 19:26:28] 2026-01-09 18:25:37,995 | INFO     | . initial setup = 1 s
[2026-01-09 19:26:28] 2026-01-09 18:25:37,996 | INFO     | . payload setup = 7 s
[2026-01-09 19:26:28] 2026-01-09 18:25:37,996 | INFO     | . stage-in = 0 s
[2026-01-09 19:26:28] 2026-01-09 18:25:37,996 | INFO     | . payload execution = 8988 s
[2026-01-09 19:26:28] 2026-01-09 18:25:37,996 | INFO     | . stage-out = 1 s
[2026-01-09 19:26:28] 2026-01-09 18:25:37,996 | INFO     | . log creation = 0 s
[2026-01-09 19:26:28] 2026-01-09 18:25:37,996 | INFO     | ..............................
[2026-01-09 19:26:28] 2026-01-09 18:25:38,104 | INFO     | 
[2026-01-09 19:26:28] 2026-01-09 18:25:38,105 | INFO     | job summary report
[2026-01-09 19:26:28] 2026-01-09 18:25:38,105 | INFO     | --------------------------------------------------
[2026-01-09 19:26:28] 2026-01-09 18:25:38,105 | INFO     | PanDA job id: 6963162284
[2026-01-09 19:26:28] 2026-01-09 18:25:38,105 | INFO     | task id: 47898826
[2026-01-09 19:26:28] 2026-01-09 18:25:38,105 | INFO     | errors: (none)
[2026-01-09 19:26:28] 2026-01-09 18:25:38,105 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 19:26:28] 2026-01-09 18:25:38,105 | INFO     | pilot state: finished 
[2026-01-09 19:26:28] 2026-01-09 18:25:38,105 | INFO     | transexitcode: 0
[2026-01-09 19:26:28] 2026-01-09 18:25:38,105 | INFO     | exeerrorcode: 0
[2026-01-09 19:26:28] 2026-01-09 18:25:38,105 | INFO     | exeerrordiag: 
[2026-01-09 19:26:28] 2026-01-09 18:25:38,105 | INFO     | exitcode: 0
[2026-01-09 19:26:28] 2026-01-09 18:25:38,106 | INFO     | exitmsg: OK
[2026-01-09 19:26:28] 2026-01-09 18:25:38,106 | INFO     | cpuconsumptiontime: 67865 s
[2026-01-09 19:26:28] 2026-01-09 18:25:38,106 | INFO     | nevents: 400
[2026-01-09 19:26:28] 2026-01-09 18:25:38,106 | INFO     | neventsw: 0
[2026-01-09 19:26:28] 2026-01-09 18:25:38,106 | INFO     | pid: 14703
[2026-01-09 19:26:28] 2026-01-09 18:25:38,106 | INFO     | pgrp: 14703
[2026-01-09 19:26:28] 2026-01-09 18:25:38,106 | INFO     | corecount: 8
[2026-01-09 19:26:28] 2026-01-09 18:25:38,106 | INFO     | event service: False
[2026-01-09 19:26:28] 2026-01-09 18:25:38,106 | INFO     | sizes: {0: 2283971, 6: 2284233, 11: 2284261, 8999: 2312086, 9000: 2312085, 9001: 2321141, 9003: 2321325, 9013: 2321519}
[2026-01-09 19:26:28] 2026-01-09 18:25:38,107 | INFO     | --------------------------------------------------
[2026-01-09 19:26:28] 2026-01-09 18:25:38,107 | INFO     | 
[2026-01-09 19:26:28] 2026-01-09 18:25:38,107 | INFO     | executing command: ls -lF /var/lib/boinc/slots/18
[2026-01-09 19:26:28] 2026-01-09 18:25:38,137 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 19:26:28] 2026-01-09 18:25:38,137 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 19:26:28] 2026-01-09 18:25:38,137 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 19:26:28] 2026-01-09 18:25:38,137 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 19:26:28] 2026-01-09 18:25:38,137 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 19:26:28] 2026-01-09 18:25:38,138 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 19:26:28] 2026-01-09 18:25:38,138 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 19:26:28] 2026-01-09 18:25:38,138 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 19:26:28] 2026-01-09 18:25:38,138 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 19:26:28] 2026-01-09 18:25:38,138 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 19:26:28] 2026-01-09 18:25:38,138 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 19:26:28] 2026-01-09 18:25:38,138 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 19:26:28] 2026-01-09 18:25:38,138 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 19:26:28] 2026-01-09 18:25:38,138 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 19:26:28] 2026-01-09 18:25:38,139 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 19:26:28] 2026-01-09 18:25:38,139 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 19:26:28] 2026-01-09 18:25:38,139 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 19:26:28] 2026-01-09 18:25:38,139 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 19:26:28] 2026-01-09 18:25:38,139 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 19:26:28] 2026-01-09 18:25:38,139 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 19:26:28] 2026-01-09 18:25:38,139 | INFO     | job 6963162284 has completed (purged errors)
[2026-01-09 19:26:28] 2026-01-09 18:25:38,139 | INFO     | overall cleanup function is called
[2026-01-09 19:26:28] 2026-01-09 18:25:39,147 | INFO     | --- collectZombieJob: --- 10, [14703]
[2026-01-09 19:26:28] 2026-01-09 18:25:39,147 | INFO     | zombie collector waiting for pid 14703
[2026-01-09 19:26:28] 2026-01-09 18:25:39,148 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 19:26:28] 2026-01-09 18:25:39,148 | INFO     | collected zombie processes
[2026-01-09 19:26:28] 2026-01-09 18:25:39,148 | INFO     | will attempt to kill all subprocesses of pid=14703
[2026-01-09 19:26:28] 2026-01-09 18:25:39,208 | INFO     | process IDs to be killed: [14703] (in reverse order)
[2026-01-09 19:26:28] 2026-01-09 18:25:39,265 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 19:26:28] 2026-01-09 18:25:39,266 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 19:26:28] 2026-01-09 18:25:39,268 | INFO     | did not find any defunct processes belonging to 14703
[2026-01-09 19:26:28] 2026-01-09 18:25:39,269 | INFO     | did not find any defunct processes belonging to 14703
[2026-01-09 19:26:28] 2026-01-09 18:25:39,269 | INFO     | ready for new job
[2026-01-09 19:26:28] 2026-01-09 18:25:39,269 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 19:26:28] 2026-01-09 18:25:39,271 | INFO     | ***************************************
[2026-01-09 19:26:28] 2026-01-09 18:25:39,271 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 19:26:28] 2026-01-09 18:25:39,271 | INFO     | ***************************************
[2026-01-09 19:26:28] 2026-01-09 18:25:39,272 | INFO     | 
[2026-01-09 19:26:28] 2026-01-09 18:25:39,272 | INFO     | pilot is running in a VM
[2026-01-09 19:26:28] 2026-01-09 18:25:39,272 | INFO     | architecture information:
[2026-01-09 19:26:28] 2026-01-09 18:25:39,273 | INFO     | executing command: cat /etc/os-release
[2026-01-09 19:26:28] 2026-01-09 18:25:39,294 | INFO     | cat /etc/os-release:
[2026-01-09 19:26:28] NAME="CentOS Linux"
[2026-01-09 19:26:28] VERSION="7 (Core)"
[2026-01-09 19:26:28] ID="centos"
[2026-01-09 19:26:28] ID_LIKE="rhel fedora"
[2026-01-09 19:26:28] VERSION_ID="7"
[2026-01-09 19:26:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 19:26:28] ANSI_COLOR="0;31"
[2026-01-09 19:26:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 19:26:28] HOME_URL="https://www.centos.org/"
[2026-01-09 19:26:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 19:26:28] 
[2026-01-09 19:26:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 19:26:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 19:26:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 19:26:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 19:26:28] 
[2026-01-09 19:26:28] 2026-01-09 18:25:39,294 | INFO     | ***************************************
[2026-01-09 19:26:28] 2026-01-09 18:25:39,797 | INFO     | executing command: df -mP /var/lib/boinc/slots/18
[2026-01-09 19:26:28] 2026-01-09 18:25:39,827 | INFO     | sufficient remaining disk space (497722327040 B)
[2026-01-09 19:26:28] 2026-01-09 18:25:39,827 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 19:26:28] 2026-01-09 18:25:39,828 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 19:26:28] 2026-01-09 18:25:39,828 | INFO     | update_server=False
[2026-01-09 19:26:28] 2026-01-09 18:25:39,828 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 19:26:28] 2026-01-09 18:25:39,828 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 19:26:28] 2026-01-09 18:25:39,829 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 19:26:28] 2026-01-09 18:25:39,829 | INFO     | aborting loop
[2026-01-09 19:26:28] 2026-01-09 18:25:39,829 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 19:26:28] 2026-01-09 18:25:39,830 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 19:26:28] 2026-01-09 18:25:39,938 | INFO     | all payload control threads have been joined
[2026-01-09 19:26:28] 2026-01-09 18:25:40,623 | INFO     | all data control threads have been joined
[2026-01-09 19:26:28] 2026-01-09 18:25:40,833 | INFO     | [job] retrieve thread has finished
[2026-01-09 19:26:28] 2026-01-09 18:25:40,834 | INFO     | [job] queue monitor thread has finished
[2026-01-09 19:26:28] 2026-01-09 18:25:40,835 | INFO     | [job] job monitor thread has finished
[2026-01-09 19:26:28] 2026-01-09 18:25:40,889 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 19:26:28] 2026-01-09 18:25:40,899 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 19:26:28] 2026-01-09 18:25:40,943 | INFO     | [payload] control thread has finished
[2026-01-09 19:26:28] 2026-01-09 18:25:40,950 | INFO     | all job control threads have been joined
[2026-01-09 19:26:28] 2026-01-09 18:25:41,083 | INFO     | [job] validate thread has finished
[2026-01-09 19:26:28] 2026-01-09 18:25:41,169 | INFO     | [data] copytool_in thread has finished
[2026-01-09 19:26:28] 2026-01-09 18:25:41,326 | INFO     | [payload] failed_post thread has finished
[2026-01-09 19:26:28] 2026-01-09 18:25:41,568 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 19:26:28] 2026-01-09 18:25:41,629 | INFO     | [data] control thread has finished
[2026-01-09 19:26:28] 2026-01-09 18:25:41,836 | INFO     | [data] copytool_out thread has finished
[2026-01-09 19:26:28] 2026-01-09 18:25:41,956 | INFO     | [job] control thread has finished
[2026-01-09 19:26:28] 2026-01-09 18:25:42,012 | INFO     | [payload] validate_post thread has finished
[2026-01-09 19:26:28] 2026-01-09 18:25:43,836 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 19:26:28] 2026-01-09 18:25:49,901 | INFO     | job.realtimelogging is not enabled
[2026-01-09 19:26:28] 2026-01-09 18:25:50,907 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 19:26:28] 2026-01-09 18:26:09,269 | INFO     | PID=8270 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 19:26:28] 2026-01-09 18:26:09,270 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 19:26:28] 2026-01-09 18:26:09,270 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 19:26:28] 2026-01-09 18:26:09,270 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 19:26:28] 2026-01-09 18:26:22,505 | INFO     | [monitor] cgroup control has ended
[2026-01-09 19:26:28] 2026-01-09 18:26:22,595 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140379182409536)>', '<ExcThread(monitor, started 140378388821760)>']
[2026-01-09 19:26:28] 2026-01-09 18:26:23,342 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 19:26:28] 2026-01-09 18:26:23,343 | INFO     | [monitor] control thread has ended
[2026-01-09 19:26:28] 2026-01-09 18:26:27,621 | INFO     | all workflow threads have been joined
[2026-01-09 19:26:28] 2026-01-09 18:26:27,621 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 19:26:28] 2026-01-09 18:26:27,621 | INFO     | traces error code: 0
[2026-01-09 19:26:28] 2026-01-09 18:26:27,622 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 19:26:28] 2026-01-09 18:26:27,765 [wrapper] ==== pilot stdout END ====
[2026-01-09 19:26:28] 2026-01-09 18:26:27,769 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 19:26:28] 2026-01-09 18:26:27,775 [wrapper] pilotpid: 8270
[2026-01-09 19:26:28] 2026-01-09 18:26:27,780 [wrapper] Pilot exit status: 0
[2026-01-09 19:26:28] 2026-01-09 18:26:27,800 [wrapper] pandaids: 6963162284
[2026-01-09 19:26:28] 2026-01-09 18:26:27,840 [wrapper] cleanup supervisor_pilot 31508 8271
[2026-01-09 19:26:28] 2026-01-09 18:26:27,845 [wrapper] Test setup, not cleaning
[2026-01-09 19:26:28] 2026-01-09 18:26:27,852 [wrapper] apfmon messages muted
[2026-01-09 19:26:28] 2026-01-09 18:26:27,856 [wrapper] ==== wrapper stdout END ====
[2026-01-09 19:26:28] 2026-01-09 18:26:27,860 [wrapper] ==== wrapper stderr END ====
[2026-01-09 19:26:28]  *** Error codes and diagnostics ***
[2026-01-09 19:26:28]     "exeErrorCode": 0,
[2026-01-09 19:26:28]     "exeErrorDiag": "",
[2026-01-09 19:26:28]     "pilotErrorCode": 0,
[2026-01-09 19:26:28]     "pilotErrorDiag": "",
[2026-01-09 19:26:28]  *** Listing of results directory ***
[2026-01-09 19:26:28] total 441728
[2026-01-09 19:26:28] -rw-r--r--. 1 boinc boinc    579449 Jan  8 22:44 pilot3.tar.gz
[2026-01-09 19:26:28] -rwx------. 1 boinc boinc     36322 Jan  8 22:49 runpilot2-wrapper.sh
[2026-01-09 19:26:28] -rw-r--r--. 1 boinc boinc      5112 Jan  8 22:51 queuedata.json
[2026-01-09 19:26:28] -rw-r--r--. 1 boinc boinc       100 Jan  9 16:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 19:26:28] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 16:54 run_atlas
[2026-01-09 19:26:28] -rw-r--r--. 1 boinc boinc       105 Jan  9 16:54 job.xml
[2026-01-09 19:26:28] -rw-r--r--. 1 boinc boinc      6390 Jan  9 16:54 init_data.xml
[2026-01-09 19:26:28] -rw-r--r--. 2 boinc boinc 223941885 Jan  9 16:54 EVNT.47898824._001292.pool.root.1
[2026-01-09 19:26:28] -rw-r--r--. 2 boinc boinc     15847 Jan  9 16:54 start_atlas.sh
[2026-01-09 19:26:28] drwxrwx--x. 2 boinc boinc        68 Jan  9 16:54 shared
[2026-01-09 19:26:28] -rw-r--r--. 2 boinc boinc    592401 Jan  9 16:54 input.tar.gz
[2026-01-09 19:26:28] -rw-r--r--. 1 boinc boinc         0 Jan  9 16:54 boinc_lockfile
[2026-01-09 19:26:28] -rw-r--r--. 1 boinc boinc      2519 Jan  9 16:54 pandaJob.out
[2026-01-09 19:26:28] -rw-------. 1 boinc boinc    989377 Jan  9 16:55 agis_schedconf.cvmfs.json
[2026-01-09 19:26:28] -rw-------. 1 boinc boinc   1516240 Jan  9 16:55 agis_ddmendpoints.agis.ALL.json
[2026-01-09 19:26:28] drwx------. 5 boinc boinc      4096 Jan  9 16:55 pilot3
[2026-01-09 19:26:28] -rw-------. 1 boinc boinc 221310373 Jan  9 19:24 HITS.47898826._033905.pool.root.1
[2026-01-09 19:26:28] -rw-r--r--. 1 boinc boinc       530 Jan  9 19:24 boinc_task_state.xml
[2026-01-09 19:26:28] -rw-------. 1 boinc boinc      1014 Jan  9 19:25 memory_monitor_summary.json
[2026-01-09 19:26:28] -rw-------. 1 boinc boinc    374783 Jan  9 19:25 log.47898826._033905.job.log.tgz.1
[2026-01-09 19:26:28] -rw-------. 1 boinc boinc      7767 Jan  9 19:25 heartbeat.json
[2026-01-09 19:26:28] -rw-------. 1 boinc boinc        95 Jan  9 19:26 pilot_heartbeat.json
[2026-01-09 19:26:28] -rw-r--r--. 1 boinc boinc      8192 Jan  9 19:26 boinc_mmap_file
[2026-01-09 19:26:28] -rw-r--r--. 1 boinc boinc        27 Jan  9 19:26 wrapper_checkpoint.txt
[2026-01-09 19:26:28] -rw-------. 1 boinc boinc      4881 Jan  9 19:26 pilotlog.txt
[2026-01-09 19:26:28] -rw-------. 1 boinc boinc   1213123 Jan  9 19:26 log.47898826._033905.job.log.1
[2026-01-09 19:26:28] -rw-------. 1 boinc boinc       357 Jan  9 19:26 output.list
[2026-01-09 19:26:28] -rw-r--r--. 1 boinc boinc       620 Jan  9 19:26 runtime_log
[2026-01-09 19:26:28] -rw-------. 1 boinc boinc   1607680 Jan  9 19:26 result.tar.gz
[2026-01-09 19:26:28] -rw-r--r--. 1 boinc boinc      8832 Jan  9 19:26 runtime_log.err
[2026-01-09 19:26:28] -rw-------. 1 boinc boinc       652 Jan  9 19:26 IISMDmy3Cy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmselKDmcaU4Gm.diag
[2026-01-09 19:26:28] -rw-r--r--. 1 boinc boinc     20720 Jan  9 19:26 stderr.txt
[2026-01-09 19:26:28] HITS file was successfully produced:
[2026-01-09 19:26:28] -rw-------. 1 boinc boinc 221310373 Jan  9 19:24 shared/HITS.pool.root.1
[2026-01-09 19:26:28]  *** Contents of shared directory: ***
[2026-01-09 19:26:28] total 436988
[2026-01-09 19:26:28] -rw-r--r--. 2 boinc boinc 223941885 Jan  9 16:54 ATLAS.root_0
[2026-01-09 19:26:28] -rw-r--r--. 2 boinc boinc     15847 Jan  9 16:54 start_atlas.sh
[2026-01-09 19:26:28] -rw-r--r--. 2 boinc boinc    592401 Jan  9 16:54 input.tar.gz
[2026-01-09 19:26:28] -rw-------. 1 boinc boinc 221310373 Jan  9 19:24 HITS.pool.root.1
[2026-01-09 19:26:28] -rw-------. 1 boinc boinc   1607680 Jan  9 19:26 result.tar.gz
19:26:29 (4540): run_atlas exited; CPU time 67922.249027
19:26:29 (4540): called boinc_finish(0)

</stderr_txt>
]]>

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