Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:14:56 (2624285): wrapper (7.7.26015): starting
12:14:56 (2624285): wrapper: running run_atlas (--nthreads 11)
[2026-01-09 12:14:56] Arguments: --nthreads 11
[2026-01-09 12:14:56] Threads: 11
[2026-01-09 12:14:56] Checking for CVMFS
[2026-01-09 12:14:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 12:14:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 12:14:56] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 12:14:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 12:14:57] 2.13.3.0 11235 92001 220992 154950 3 370 20865379 32935936 19285 16776704 0 735858820 99.564 842539121 21660 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 12:14:57] CVMFS is ok
[2026-01-09 12:14:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 12:14:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 12:14:57] Further information can be found at the LHC@home message board.
[2026-01-09 12:14:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 12:14:57] Checking for apptainer binary...
[2026-01-09 12:14:57] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 12:14:57] Running /usr/bin/apptainer --version
[2026-01-09 12:14:57] apptainer version 1.4.5-2.el9
[2026-01-09 12:14:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 12:14:58] c7-2-37.aglt2.org
[2026-01-09 12:14:58] apptainer works
[2026-01-09 12:14:59] Set ATHENA_PROC_NUMBER=11
[2026-01-09 12:14:59] Set ATHENA_CORE_NUMBER=11
[2026-01-09 12:14:59] Starting ATLAS job with PandaID=6963148972
[2026-01-09 12:14:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 16:36:23]  *** The last 200 lines of the pilot log: ***
[2026-01-09 16:36:23] 2026-01-09 21:35:43,119 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 16:36:23] 2026-01-09 21:35:44,910 | INFO     | PID=2630365 has CPU usage=10.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-09 16:36:23] 2026-01-09 21:35:44,910 | INFO     | .. there are 22 such processes running
[2026-01-09 16:36:23] 2026-01-09 21:35:45,624 | INFO     | monitor loop #1033: job 0:6963148972 is in state 'finished'
[2026-01-09 16:36:23] 2026-01-09 21:35:45,624 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 16:36:23] 2026-01-09 21:35:45,911 | INFO     | time since job start (15612s) is within the limit (349056.0s)
[2026-01-09 16:36:23] 2026-01-09 21:35:47,926 | INFO     | time since job start (15614s) is within the limit (349056.0s)
[2026-01-09 16:36:23] 2026-01-09 21:35:48,138 | INFO     | monitor loop #1034: job 0:6963148972 is in state 'finished'
[2026-01-09 16:36:23] 2026-01-09 21:35:48,138 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 16:36:23] 2026-01-09 21:35:49,571 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 16:36:23] 2026-01-09 21:35:49,589 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3255.709989583334
[2026-01-09 16:36:23] 2026-01-09 21:35:49,606 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963148972/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 16:36:23] 2026-01-09 21:35:49,607 | INFO     | extracted standard info from prmon json
[2026-01-09 16:36:23] 2026-01-09 21:35:49,607 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 16:36:23] 2026-01-09 21:35:49,607 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 16:36:23] 2026-01-09 21:35:49,607 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 16:36:23] 2026-01-09 21:35:49,607 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 16:36:23] 2026-01-09 21:35:49,611 | INFO     | fitting pss+swap vs Time
[2026-01-09 16:36:23] 2026-01-09 21:35:49,613 | INFO     | sum of square deviations: 5141927595.631352
[2026-01-09 16:36:23] 2026-01-09 21:35:49,615 | INFO     | sum of deviations: 83594869733.34892
[2026-01-09 16:36:23] 2026-01-09 21:35:49,615 | INFO     | mean x: 1767986750.145098
[2026-01-09 16:36:23] 2026-01-09 21:35:49,615 | INFO     | mean y: 2575388.6392156864
[2026-01-09 16:36:23] 2026-01-09 21:35:49,615 | INFO     | intersect: -28740462960.29331
[2026-01-09 16:36:23] 2026-01-09 21:35:49,615 | INFO     | chi2: 2.9896422596857164
[2026-01-09 16:36:23] 2026-01-09 21:35:49,616 | INFO     | sum of square deviations: 4845384483.024039
[2026-01-09 16:36:23] 2026-01-09 21:35:49,638 | INFO     | sum of deviations: 98426213013.13602
[2026-01-09 16:36:23] 2026-01-09 21:35:49,638 | INFO     | mean x: 1767986597.648
[2026-01-09 16:36:23] 2026-01-09 21:35:49,638 | INFO     | mean y: 2582876.672
[2026-01-09 16:36:23] 2026-01-09 21:35:49,638 | INFO     | intersect: -35911228725.718506
[2026-01-09 16:36:23] 2026-01-09 21:35:49,638 | INFO     | chi2: 2.2857982334728493
[2026-01-09 16:36:23] 2026-01-09 21:35:49,638 | INFO     | current chi2=2.2857982334728493 (change=23.54275077336036 %)
[2026-01-09 16:36:23] 2026-01-09 21:35:49,638 | INFO     | right removable region: 249
[2026-01-09 16:36:23] 2026-01-09 21:35:49,639 | INFO     | sum of square deviations: 4845361913.02404
[2026-01-09 16:36:23] 2026-01-09 21:35:49,640 | INFO     | sum of deviations: 27483791133.224007
[2026-01-09 16:36:23] 2026-01-09 21:35:49,640 | INFO     | mean x: 1767986902.648
[2026-01-09 16:36:23] 2026-01-09 21:35:49,640 | INFO     | mean y: 2604104.048
[2026-01-09 16:36:23] 2026-01-09 21:35:49,640 | INFO     | intersect: -10025745404.384724
[2026-01-09 16:36:23] 2026-01-09 21:35:49,641 | INFO     | chi2: 1.0748932736603405
[2026-01-09 16:36:23] 2026-01-09 21:35:49,641 | INFO     | current chi2=1.0748932736603405 (change=64.0460904585508 %)
[2026-01-09 16:36:23] 2026-01-09 21:35:49,641 | INFO     | sum of square deviations: 4560424355.412229
[2026-01-09 16:36:23] 2026-01-09 21:35:49,642 | INFO     | sum of deviations: 5052263396.812218
[2026-01-09 16:36:23] 2026-01-09 21:35:49,642 | INFO     | mean x: 1767987055.1510205
[2026-01-09 16:36:23] 2026-01-09 21:35:49,642 | INFO     | mean y: 2616082.951020408
[2026-01-09 16:36:23] 2026-01-09 21:35:49,643 | INFO     | intersect: -1956047319.5405898
[2026-01-09 16:36:23] 2026-01-09 21:35:49,643 | INFO     | chi2: 0.8267989430585205
[2026-01-09 16:36:23] 2026-01-09 21:35:49,643 | INFO     | current chi2=0.8267989430585205 (change=23.08083385404235 %)
[2026-01-09 16:36:23] 2026-01-09 21:35:49,643 | INFO     | left removable region: 20
[2026-01-09 16:36:23] 2026-01-09 21:35:49,643 | INFO     | sum of square deviations: 3724069336.3406105
[2026-01-09 16:36:23] 2026-01-09 21:35:49,644 | INFO     | sum of deviations: 6310891163.969433
[2026-01-09 16:36:23] 2026-01-09 21:35:49,645 | INFO     | mean x: 1767987177.1572053
[2026-01-09 16:36:23] 2026-01-09 21:35:49,645 | INFO     | mean y: 2633061.139737991
[2026-01-09 16:36:23] 2026-01-09 21:35:49,645 | INFO     | intersect: -2993437539.7627835
[2026-01-09 16:36:23] 2026-01-09 21:35:49,645 | INFO     | chi2: 0.00776930366530162
[2026-01-09 16:36:23] 2026-01-09 21:35:49,645 | INFO     | current memory leak: 1.69 B/s (using 229 data points, chi2=0.01)
[2026-01-09 16:36:23] 2026-01-09 21:35:49,646 | INFO     | could have reported an average CPU frequency of 3219 MHz (12 samples)
[2026-01-09 16:36:23] 2026-01-09 21:35:49,646 | INFO     | ..............................
[2026-01-09 16:36:23] 2026-01-09 21:35:49,646 | INFO     | . Timing measurements:
[2026-01-09 16:36:23] 2026-01-09 21:35:49,648 | INFO     | . get job = 0 s
[2026-01-09 16:36:23] 2026-01-09 21:35:49,649 | INFO     | . initial setup = 3 s
[2026-01-09 16:36:23] 2026-01-09 21:35:49,649 | INFO     | . payload setup = 17 s
[2026-01-09 16:36:23] 2026-01-09 21:35:49,649 | INFO     | . stage-in = 0 s
[2026-01-09 16:36:23] 2026-01-09 21:35:49,649 | INFO     | . payload execution = 15531 s
[2026-01-09 16:36:23] 2026-01-09 21:35:49,649 | INFO     | . stage-out = 4 s
[2026-01-09 16:36:23] 2026-01-09 21:35:49,649 | INFO     | . log creation = 0 s
[2026-01-09 16:36:23] 2026-01-09 21:35:49,649 | INFO     | ..............................
[2026-01-09 16:36:23] 2026-01-09 21:35:49,881 | INFO     | 
[2026-01-09 16:36:23] 2026-01-09 21:35:49,881 | INFO     | job summary report
[2026-01-09 16:36:23] 2026-01-09 21:35:49,881 | INFO     | --------------------------------------------------
[2026-01-09 16:36:23] 2026-01-09 21:35:49,881 | INFO     | PanDA job id: 6963148972
[2026-01-09 16:36:23] 2026-01-09 21:35:49,881 | INFO     | task id: 47898826
[2026-01-09 16:36:23] 2026-01-09 21:35:49,881 | INFO     | errors: (none)
[2026-01-09 16:36:23] 2026-01-09 21:35:49,881 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 16:36:23] 2026-01-09 21:35:49,881 | INFO     | pilot state: finished 
[2026-01-09 16:36:23] 2026-01-09 21:35:49,881 | INFO     | transexitcode: 0
[2026-01-09 16:36:23] 2026-01-09 21:35:49,881 | INFO     | exeerrorcode: 0
[2026-01-09 16:36:23] 2026-01-09 21:35:49,898 | INFO     | exeerrordiag: 
[2026-01-09 16:36:23] 2026-01-09 21:35:49,898 | INFO     | exitcode: 0
[2026-01-09 16:36:23] 2026-01-09 21:35:49,898 | INFO     | exitmsg: OK
[2026-01-09 16:36:23] 2026-01-09 21:35:49,898 | INFO     | cpuconsumptiontime: 48159 s
[2026-01-09 16:36:23] 2026-01-09 21:35:49,898 | INFO     | nevents: 400
[2026-01-09 16:36:23] 2026-01-09 21:35:49,898 | INFO     | neventsw: 0
[2026-01-09 16:36:23] 2026-01-09 21:35:49,898 | INFO     | pid: 2639056
[2026-01-09 16:36:23] 2026-01-09 21:35:49,898 | INFO     | pgrp: 2639056
[2026-01-09 16:36:23] 2026-01-09 21:35:49,898 | INFO     | corecount: 11
[2026-01-09 16:36:23] 2026-01-09 21:35:49,898 | INFO     | event service: False
[2026-01-09 16:36:23] 2026-01-09 21:35:49,898 | INFO     | sizes: {0: 2283800, 1: 2283999, 2: 2283999, 12: 2284027, 14: 2284317, 23: 2284345, 15554: 2315682, 15555: 2315681, 15560: 2324735, 15563: 2324791, 15579: 2324985}
[2026-01-09 16:36:23] 2026-01-09 21:35:49,898 | INFO     | --------------------------------------------------
[2026-01-09 16:36:23] 2026-01-09 21:35:49,898 | INFO     | 
[2026-01-09 16:36:23] 2026-01-09 21:35:49,898 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 16:36:23] 2026-01-09 21:35:49,924 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 16:36:23] 2026-01-09 21:35:49,924 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 16:36:23] 2026-01-09 21:35:49,924 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 16:36:23] 2026-01-09 21:35:49,925 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 16:36:23] 2026-01-09 21:35:49,925 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 16:36:23] 2026-01-09 21:35:49,925 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 16:36:23] 2026-01-09 21:35:49,925 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 16:36:23] 2026-01-09 21:35:49,925 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 16:36:23] 2026-01-09 21:35:49,925 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 16:36:23] 2026-01-09 21:35:49,925 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 16:36:23] 2026-01-09 21:35:49,925 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 16:36:23] 2026-01-09 21:35:49,925 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 16:36:23] 2026-01-09 21:35:49,925 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 16:36:23] 2026-01-09 21:35:49,925 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 16:36:23] 2026-01-09 21:35:49,925 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 16:36:23] 2026-01-09 21:35:49,925 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 16:36:23] 2026-01-09 21:35:49,925 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 16:36:23] 2026-01-09 21:35:49,925 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 16:36:23] 2026-01-09 21:35:49,925 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 16:36:23] 2026-01-09 21:35:49,925 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 16:36:23] 2026-01-09 21:35:49,926 | INFO     | job 6963148972 has completed (purged errors)
[2026-01-09 16:36:23] 2026-01-09 21:35:49,926 | INFO     | overall cleanup function is called
[2026-01-09 16:36:23] 2026-01-09 21:35:50,935 | INFO     | --- collectZombieJob: --- 10, [2639056]
[2026-01-09 16:36:23] 2026-01-09 21:35:50,935 | INFO     | zombie collector waiting for pid 2639056
[2026-01-09 16:36:23] 2026-01-09 21:35:50,935 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 16:36:23] 2026-01-09 21:35:50,935 | INFO     | collected zombie processes
[2026-01-09 16:36:23] 2026-01-09 21:35:50,935 | INFO     | will attempt to kill all subprocesses of pid=2639056
[2026-01-09 16:36:23] 2026-01-09 21:35:52,213 | INFO     | process IDs to be killed: [2639056] (in reverse order)
[2026-01-09 16:36:23] 2026-01-09 21:35:52,488 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 16:36:23] 2026-01-09 21:35:52,489 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 16:36:23] 2026-01-09 21:35:52,504 | INFO     | did not find any defunct processes belonging to 2639056
[2026-01-09 16:36:23] 2026-01-09 21:35:52,540 | INFO     | did not find any defunct processes belonging to 2639056
[2026-01-09 16:36:23] 2026-01-09 21:35:52,540 | INFO     | ready for new job
[2026-01-09 16:36:23] 2026-01-09 21:35:52,540 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 16:36:23] 2026-01-09 21:35:52,542 | INFO     | ***************************************
[2026-01-09 16:36:23] 2026-01-09 21:35:52,542 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 16:36:23] 2026-01-09 21:35:52,542 | INFO     | ***************************************
[2026-01-09 16:36:23] 2026-01-09 21:35:52,542 | INFO     | 
[2026-01-09 16:36:23] 2026-01-09 21:35:52,551 | INFO     | architecture information:
[2026-01-09 16:36:23] 2026-01-09 21:35:52,566 | INFO     | executing command: cat /etc/os-release
[2026-01-09 16:36:23] 2026-01-09 21:35:52,669 | INFO     | cat /etc/os-release:
[2026-01-09 16:36:23] NAME="CentOS Linux"
[2026-01-09 16:36:23] VERSION="7 (Core)"
[2026-01-09 16:36:23] ID="centos"
[2026-01-09 16:36:23] ID_LIKE="rhel fedora"
[2026-01-09 16:36:23] VERSION_ID="7"
[2026-01-09 16:36:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 16:36:23] ANSI_COLOR="0;31"
[2026-01-09 16:36:23] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 16:36:23] HOME_URL="https://www.centos.org/"
[2026-01-09 16:36:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 16:36:23] 
[2026-01-09 16:36:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 16:36:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 16:36:23] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 16:36:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 16:36:23] 
[2026-01-09 16:36:23] 2026-01-09 21:35:52,669 | INFO     | ***************************************
[2026-01-09 16:36:23] 2026-01-09 21:35:53,174 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 16:36:23] 2026-01-09 21:35:53,326 | INFO     | sufficient remaining disk space (73792487424 B)
[2026-01-09 16:36:23] 2026-01-09 21:35:53,326 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 16:36:23] 2026-01-09 21:35:53,326 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 16:36:23] 2026-01-09 21:35:53,326 | INFO     | update_server=False
[2026-01-09 16:36:23] 2026-01-09 21:35:53,326 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 16:36:23] 2026-01-09 21:35:53,330 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 16:36:23] 2026-01-09 21:35:53,454 | INFO     | all job control threads have been joined
[2026-01-09 16:36:23] 2026-01-09 21:35:54,200 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 16:36:23] 2026-01-09 21:35:54,200 | INFO     | aborting loop
[2026-01-09 16:36:23] 2026-01-09 21:35:54,321 | INFO     | all data control threads have been joined
[2026-01-09 16:36:23] 2026-01-09 21:35:54,332 | INFO     | [job] retrieve thread has finished
[2026-01-09 16:36:23] 2026-01-09 21:35:54,398 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 16:36:23] 2026-01-09 21:35:54,405 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 16:36:23] 2026-01-09 21:35:54,460 | INFO     | [job] control thread has finished
[2026-01-09 16:36:23] 2026-01-09 21:35:54,494 | INFO     | all payload control threads have been joined
[2026-01-09 16:36:23] 2026-01-09 21:35:54,516 | INFO     | [data] copytool_in thread has finished
[2026-01-09 16:36:23] 2026-01-09 21:35:54,862 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 16:36:23] 2026-01-09 21:35:54,901 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 16:36:23] 2026-01-09 21:35:55,200 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 16:36:23] 2026-01-09 21:35:55,206 | INFO     | [job] job monitor thread has finished
[2026-01-09 16:36:23] 2026-01-09 21:35:55,327 | INFO     | [data] control thread has finished
[2026-01-09 16:36:23] 2026-01-09 21:35:55,500 | INFO     | [payload] control thread has finished
[2026-01-09 16:36:23] 2026-01-09 21:35:55,513 | INFO     | [payload] failed_post thread has finished
[2026-01-09 16:36:23] 2026-01-09 21:35:55,752 | INFO     | [job] validate thread has finished
[2026-01-09 16:36:23] 2026-01-09 21:35:55,810 | INFO     | [payload] validate_post thread has finished
[2026-01-09 16:36:23] 2026-01-09 21:35:55,820 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 16:36:23] 2026-01-09 21:35:55,907 | INFO     | [job] queue monitor thread has finished
[2026-01-09 16:36:23] 2026-01-09 21:35:56,405 | INFO     | [data] copytool_out thread has finished
[2026-01-09 16:36:23] 2026-01-09 21:35:57,342 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 16:36:23] 2026-01-09 21:35:59,944 | INFO     | [monitor] cgroup control has ended
[2026-01-09 16:36:23] 2026-01-09 21:36:01,797 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140085372004160)>', '<ExcThread(monitor, started 140084451997440)>']
[2026-01-09 16:36:23] 2026-01-09 21:36:06,828 | INFO     | all workflow threads have been joined
[2026-01-09 16:36:23] 2026-01-09 21:36:06,828 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 16:36:23] 2026-01-09 21:36:06,828 | INFO     | traces error code: 0
[2026-01-09 16:36:23] 2026-01-09 21:36:06,828 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 16:36:23] 2026-01-09 21:36:22,291 | INFO     | PID=2630365 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 16:36:23] 2026-01-09 21:36:22,292 | INFO     | .. there are 22 such processes running
[2026-01-09 16:36:23] 2026-01-09 21:36:22,292 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 16:36:23] 2026-01-09 21:36:22,292 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 16:36:23] 2026-01-09 21:36:22,292 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 16:36:23] 2026-01-09 21:36:22,292 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 16:36:23] 2026-01-09 21:36:22,306 | INFO     | [monitor] control thread has ended
[2026-01-09 16:36:23] 2026-01-09 21:36:22,687 [wrapper] ==== pilot stdout END ====
[2026-01-09 16:36:23] 2026-01-09 21:36:22,697 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 16:36:23] 2026-01-09 21:36:22,704 [wrapper] pilotpid: 2630365
[2026-01-09 16:36:23] 2026-01-09 21:36:22,718 [wrapper] Pilot exit status: 0
[2026-01-09 16:36:23] 2026-01-09 21:36:22,823 [wrapper] pandaids: 6963148972
[2026-01-09 16:36:23] 2026-01-09 21:36:22,942 [wrapper] cleanup supervisor_pilot 3830246 2630366
[2026-01-09 16:36:23] 2026-01-09 21:36:22,946 [wrapper] Test setup, not cleaning
[2026-01-09 16:36:23] 2026-01-09 21:36:22,954 [wrapper] apfmon messages muted
[2026-01-09 16:36:23] 2026-01-09 21:36:22,971 [wrapper] ==== wrapper stdout END ====
[2026-01-09 16:36:23] 2026-01-09 21:36:23,021 [wrapper] ==== wrapper stderr END ====
[2026-01-09 16:36:23]  *** Error codes and diagnostics ***
[2026-01-09 16:36:23]     "exeErrorCode": 0,
[2026-01-09 16:36:23]     "exeErrorDiag": "",
[2026-01-09 16:36:23]     "pilotErrorCode": 0,
[2026-01-09 16:36:23]     "pilotErrorDiag": "",
[2026-01-09 16:36:23]  *** Listing of results directory ***
[2026-01-09 16:36:23] total 445124
[2026-01-09 16:36:23] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 11:02 pilot3.tar.gz
[2026-01-09 16:36:23] -rwx------. 1 boincer umatlas     36322 Jan  8 11:05 runpilot2-wrapper.sh
[2026-01-09 16:36:23] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 11:07 queuedata.json
[2026-01-09 16:36:23] -rw-r--r--. 1 boincer umatlas       100 Jan  9 12:14 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 16:36:23] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 12:14 run_atlas
[2026-01-09 16:36:23] -rw-r--r--. 1 boincer umatlas       105 Jan  9 12:14 job.xml
[2026-01-09 16:36:23] -rw-r--r--. 2 boincer umatlas 227069158 Jan  9 12:14 EVNT.47898824._001117.pool.root.1
[2026-01-09 16:36:23] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 12:14 start_atlas.sh
[2026-01-09 16:36:23] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 12:14 shared
[2026-01-09 16:36:23] -rw-r--r--. 2 boincer umatlas    592402 Jan  9 12:14 input.tar.gz
[2026-01-09 16:36:23] -rw-r--r--. 1 boincer umatlas         0 Jan  9 12:14 boinc_lockfile
[2026-01-09 16:36:23] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 12:14 pandaJob.out
[2026-01-09 16:36:23] -rw-------. 1 boincer umatlas        57 Jan  9 12:14 setup.sh.local
[2026-01-09 16:36:23] -rw-------. 1 boincer umatlas    989356 Jan  9 12:15 agis_schedconf.cvmfs.json
[2026-01-09 16:36:23] drwx------. 5 boincer umatlas      4096 Jan  9 12:15 pilot3
[2026-01-09 16:36:23] -rw-r--r--. 1 boincer umatlas      6944 Jan  9 16:30 init_data.xml
[2026-01-09 16:36:23] -rw-------. 1 boincer umatlas 219590792 Jan  9 16:34 HITS.47898826._028320.pool.root.1
[2026-01-09 16:36:23] -rw-r--r--. 1 boincer umatlas       530 Jan  9 16:34 boinc_task_state.xml
[2026-01-09 16:36:23] -rw-------. 1 boincer umatlas      1047 Jan  9 16:35 memory_monitor_summary.json
[2026-01-09 16:36:23] -rw-------. 1 boincer umatlas   1516240 Jan  9 16:35 agis_ddmendpoints.agis.ALL.json
[2026-01-09 16:36:23] -rw-------. 1 boincer umatlas    534845 Jan  9 16:35 log.47898826._028320.job.log.tgz.1
[2026-01-09 16:36:23] -rw-------. 1 boincer umatlas      7775 Jan  9 16:35 heartbeat.json
[2026-01-09 16:36:23] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 16:36 boinc_mmap_file
[2026-01-09 16:36:23] -rw-r--r--. 1 boincer umatlas        28 Jan  9 16:36 wrapper_checkpoint.txt
[2026-01-09 16:36:23] -rw-------. 1 boincer umatlas        95 Jan  9 16:36 pilot_heartbeat.json
[2026-01-09 16:36:23] -rw-------. 1 boincer umatlas       823 Jan  9 16:36 pilotlog.txt
[2026-01-09 16:36:23] -rw-------. 1 boincer umatlas   2082773 Jan  9 16:36 log.47898826._028320.job.log.1
[2026-01-09 16:36:23] -rw-------. 1 boincer umatlas       357 Jan  9 16:36 output.list
[2026-01-09 16:36:23] -rw-r--r--. 1 boincer umatlas       620 Jan  9 16:36 runtime_log
[2026-01-09 16:36:23] -rw-------. 1 boincer umatlas   2631680 Jan  9 16:36 result.tar.gz
[2026-01-09 16:36:23] -rw-r--r--. 1 boincer umatlas      9340 Jan  9 16:36 runtime_log.err
[2026-01-09 16:36:23] -rw-------. 1 boincer umatlas       655 Jan  9 16:36 d5CODmDh7x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmxnfKDmBi3jzm.diag
[2026-01-09 16:36:23] -rw-r--r--. 1 boincer umatlas     21522 Jan  9 16:36 stderr.txt
[2026-01-09 16:36:23] HITS file was successfully produced:
[2026-01-09 16:36:23] -rw-------. 1 boincer umatlas 219590792 Jan  9 16:34 shared/HITS.pool.root.1
[2026-01-09 16:36:23]  *** Contents of shared directory: ***
[2026-01-09 16:36:23] total 439372
[2026-01-09 16:36:23] -rw-r--r--. 2 boincer umatlas 227069158 Jan  9 12:14 ATLAS.root_0
[2026-01-09 16:36:23] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 12:14 start_atlas.sh
[2026-01-09 16:36:23] -rw-r--r--. 2 boincer umatlas    592402 Jan  9 12:14 input.tar.gz
[2026-01-09 16:36:23] -rw-------. 1 boincer umatlas 219590792 Jan  9 16:34 HITS.pool.root.1
[2026-01-09 16:36:23] -rw-------. 1 boincer umatlas   2631680 Jan  9 16:36 result.tar.gz
16:36:24 (2624285): run_atlas exited; CPU time 48711.505799
16:36:24 (2624285): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN