Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:34:39 (5040): wrapper (7.7.26015): starting
16:34:39 (5040): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 16:34:39] Arguments: --nthreads 8
[2026-01-09 16:34:39] Threads: 8
[2026-01-09 16:34:39] Checking for CVMFS
[2026-01-09 16:34:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 16:34:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 16:34:39] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 16:34:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 16:34:39] 2.11.2.0 4234 35602 97752 154948 2 57 15017147 25165824 0 130560 0 16200437 99.870 8067373 3153 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 16:34:39] CVMFS is ok
[2026-01-09 16:34:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 16:34:39] Checking for apptainer binary...
[2026-01-09 16:34:39] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 16:34:39] Running /usr/bin/apptainer --version
[2026-01-09 16:34:39] apptainer version 1.3.2-1.el7
[2026-01-09 16:34:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 16:34:41] cg-vwn359.simple-grid.lan
[2026-01-09 16:34:41] apptainer works
[2026-01-09 16:34:41] Set ATHENA_PROC_NUMBER=8
[2026-01-09 16:34:41] Set ATHENA_CORE_NUMBER=8
[2026-01-09 16:34:41] Starting ATLAS job with PandaID=6963162202
[2026-01-09 16:34:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 19:26:21]  *** The last 200 lines of the pilot log: ***
[2026-01-09 19:26:21] 2026-01-09 18:25:38,439 | INFO     | monitor loop #704: job 0:6963162202 is in state 'finished'
[2026-01-09 19:26:21] 2026-01-09 18:25:38,439 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 19:26:21] 2026-01-09 18:25:39,364 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 19:26:21] 2026-01-09 18:25:39,365 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 19:26:21] 2026-01-09 18:25:39,367 | INFO     | using path: /var/lib/boinc/slots/14/PanDA_Pilot-6963162202/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 19:26:21] 2026-01-09 18:25:39,368 | INFO     | extracted standard info from prmon json
[2026-01-09 19:26:21] 2026-01-09 18:25:39,368 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 19:26:21] 2026-01-09 18:25:39,368 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 19:26:21] 2026-01-09 18:25:39,369 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 19:26:21] 2026-01-09 18:25:39,369 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 19:26:21] 2026-01-09 18:25:39,373 | INFO     | fitting pss+swap vs Time
[2026-01-09 19:26:21] 2026-01-09 18:25:39,373 | INFO     | sum of square deviations: 1470248962.0
[2026-01-09 19:26:21] 2026-01-09 18:25:39,375 | INFO     | sum of deviations: -15305128079.0
[2026-01-09 19:26:21] 2026-01-09 18:25:39,375 | INFO     | mean x: 1767978027.5
[2026-01-09 19:26:21] 2026-01-09 18:25:39,375 | INFO     | mean y: 2515322.25
[2026-01-09 19:26:21] 2026-01-09 18:25:39,375 | INFO     | intersect: 18406969840.576187
[2026-01-09 19:26:21] 2026-01-09 18:25:39,375 | INFO     | chi2: 2.4383111965392716
[2026-01-09 19:26:21] 2026-01-09 18:25:39,376 | INFO     | sum of square deviations: 1342841922.0
[2026-01-09 19:26:21] 2026-01-09 18:25:39,377 | INFO     | sum of deviations: -3604416555.9999995
[2026-01-09 19:26:21] 2026-01-09 18:25:39,377 | INFO     | mean x: 1767977875.0
[2026-01-09 19:26:21] 2026-01-09 18:25:39,377 | INFO     | mean y: 2529007.3312883438
[2026-01-09 19:26:21] 2026-01-09 18:25:39,378 | INFO     | intersect: 4748082909.759795
[2026-01-09 19:26:21] 2026-01-09 18:25:39,378 | INFO     | chi2: 1.6764320755655189
[2026-01-09 19:26:21] 2026-01-09 18:25:39,378 | INFO     | current chi2=1.6764320755655189 (change=31.246180637446862 %)
[2026-01-09 19:26:21] 2026-01-09 18:25:39,378 | INFO     | sum of square deviations: 1223016419.5
[2026-01-09 19:26:21] 2026-01-09 18:25:39,380 | INFO     | sum of deviations: -3194858804.500008
[2026-01-09 19:26:21] 2026-01-09 18:25:39,380 | INFO     | mean x: 1767977722.5
[2026-01-09 19:26:21] 2026-01-09 18:25:39,380 | INFO     | mean y: 2529529.006329114
[2026-01-09 19:26:21] 2026-01-09 18:25:39,380 | INFO     | intersect: 4620978719.7361
[2026-01-09 19:26:21] 2026-01-09 18:25:39,380 | INFO     | chi2: 1.6767040593796445
[2026-01-09 19:26:21] 2026-01-09 18:25:39,380 | INFO     | current chi2=1.6767040593796445 (change=-0.01622396863492855 %)
[2026-01-09 19:26:21] 2026-01-09 18:25:39,381 | INFO     | right removable region: 157
[2026-01-09 19:26:21] 2026-01-09 18:25:39,381 | INFO     | sum of square deviations: 1342841922.0
[2026-01-09 19:26:21] 2026-01-09 18:25:39,382 | INFO     | sum of deviations: -40970083188.0
[2026-01-09 19:26:21] 2026-01-09 18:25:39,382 | INFO     | mean x: 1767978180.0
[2026-01-09 19:26:21] 2026-01-09 18:25:39,382 | INFO     | mean y: 2545617.208588957
[2026-01-09 19:26:21] 2026-01-09 18:25:39,383 | INFO     | intersect: 53943528485.30885
[2026-01-09 19:26:21] 2026-01-09 18:25:39,383 | INFO     | chi2: 0.9442484226078764
[2026-01-09 19:26:21] 2026-01-09 18:25:39,383 | INFO     | current chi2=0.9442484226078764 (change=61.274490969484894 %)
[2026-01-09 19:26:21] 2026-01-09 18:25:39,383 | INFO     | sum of square deviations: 1223016419.5
[2026-01-09 19:26:21] 2026-01-09 18:25:39,385 | INFO     | sum of deviations: -38377630981.5
[2026-01-09 19:26:21] 2026-01-09 18:25:39,385 | INFO     | mean x: 1767978332.5
[2026-01-09 19:26:21] 2026-01-09 18:25:39,385 | INFO     | mean y: 2542265.765822785
[2026-01-09 19:26:21] 2026-01-09 18:25:39,385 | INFO     | intersect: 55480799913.12582
[2026-01-09 19:26:21] 2026-01-09 18:25:39,385 | INFO     | chi2: 0.9346998300099222
[2026-01-09 19:26:21] 2026-01-09 18:25:39,385 | INFO     | current chi2=0.9346998300099222 (change=1.0112373364185712 %)
[2026-01-09 19:26:21] 2026-01-09 18:25:39,386 | INFO     | left removable region: 20
[2026-01-09 19:26:21] 2026-01-09 18:25:39,386 | INFO     | sum of square deviations: 797291228.0
[2026-01-09 19:26:21] 2026-01-09 18:25:39,387 | INFO     | sum of deviations: -16627320647.0
[2026-01-09 19:26:21] 2026-01-09 18:25:39,387 | INFO     | mean x: 1767978302.0
[2026-01-09 19:26:21] 2026-01-09 18:25:39,387 | INFO     | mean y: 2545202.1605839417
[2026-01-09 19:26:21] 2026-01-09 18:25:39,387 | INFO     | intersect: 36873315996.96055
[2026-01-09 19:26:21] 2026-01-09 18:25:39,387 | INFO     | chi2: 0.12206155277413921
[2026-01-09 19:26:21] 2026-01-09 18:25:39,388 | INFO     | current memory leak: -20.85 B/s (using 137 data points, chi2=0.12)
[2026-01-09 19:26:21] 2026-01-09 18:25:39,388 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-01-09 19:26:21] 2026-01-09 18:25:39,388 | INFO     | ..............................
[2026-01-09 19:26:21] 2026-01-09 18:25:39,389 | INFO     | . Timing measurements:
[2026-01-09 19:26:21] 2026-01-09 18:25:39,389 | INFO     | . get job = 0 s
[2026-01-09 19:26:21] 2026-01-09 18:25:39,389 | INFO     | . initial setup = 2 s
[2026-01-09 19:26:21] 2026-01-09 18:25:39,389 | INFO     | . payload setup = 8 s
[2026-01-09 19:26:21] 2026-01-09 18:25:39,389 | INFO     | . stage-in = 0 s
[2026-01-09 19:26:21] 2026-01-09 18:25:39,389 | INFO     | . payload execution = 10202 s
[2026-01-09 19:26:21] 2026-01-09 18:25:39,389 | INFO     | . stage-out = 1 s
[2026-01-09 19:26:21] 2026-01-09 18:25:39,389 | INFO     | . log creation = 0 s
[2026-01-09 19:26:21] 2026-01-09 18:25:39,389 | INFO     | ..............................
[2026-01-09 19:26:21] 2026-01-09 18:25:39,656 | INFO     | 
[2026-01-09 19:26:21] 2026-01-09 18:25:39,657 | INFO     | job summary report
[2026-01-09 19:26:21] 2026-01-09 18:25:39,657 | INFO     | --------------------------------------------------
[2026-01-09 19:26:21] 2026-01-09 18:25:39,657 | INFO     | PanDA job id: 6963162202
[2026-01-09 19:26:21] 2026-01-09 18:25:39,657 | INFO     | task id: 47898826
[2026-01-09 19:26:21] 2026-01-09 18:25:39,657 | INFO     | errors: (none)
[2026-01-09 19:26:21] 2026-01-09 18:25:39,657 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 19:26:21] 2026-01-09 18:25:39,657 | INFO     | pilot state: finished 
[2026-01-09 19:26:21] 2026-01-09 18:25:39,658 | INFO     | transexitcode: 0
[2026-01-09 19:26:21] 2026-01-09 18:25:39,658 | INFO     | exeerrorcode: 0
[2026-01-09 19:26:21] 2026-01-09 18:25:39,658 | INFO     | exeerrordiag: 
[2026-01-09 19:26:21] 2026-01-09 18:25:39,658 | INFO     | exitcode: 0
[2026-01-09 19:26:21] 2026-01-09 18:25:39,658 | INFO     | exitmsg: OK
[2026-01-09 19:26:21] 2026-01-09 18:25:39,658 | INFO     | cpuconsumptiontime: 76430 s
[2026-01-09 19:26:21] 2026-01-09 18:25:39,658 | INFO     | nevents: 400
[2026-01-09 19:26:21] 2026-01-09 18:25:39,658 | INFO     | neventsw: 0
[2026-01-09 19:26:21] 2026-01-09 18:25:39,658 | INFO     | pid: 15220
[2026-01-09 19:26:21] 2026-01-09 18:25:39,658 | INFO     | pgrp: 15220
[2026-01-09 19:26:21] 2026-01-09 18:25:39,659 | INFO     | corecount: 8
[2026-01-09 19:26:21] 2026-01-09 18:25:39,659 | INFO     | event service: False
[2026-01-09 19:26:21] 2026-01-09 18:25:39,659 | INFO     | sizes: {0: 2283800, 1: 2283999, 7: 2284261, 12: 2284289, 10214: 2312889, 10216: 2321889, 10217: 2322073, 10224: 2322331}
[2026-01-09 19:26:21] 2026-01-09 18:25:39,659 | INFO     | --------------------------------------------------
[2026-01-09 19:26:21] 2026-01-09 18:25:39,659 | INFO     | 
[2026-01-09 19:26:21] 2026-01-09 18:25:39,659 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2026-01-09 19:26:21] 2026-01-09 18:25:39,689 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 19:26:21] 2026-01-09 18:25:39,689 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 19:26:21] 2026-01-09 18:25:39,689 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 19:26:21] 2026-01-09 18:25:39,689 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 19:26:21] 2026-01-09 18:25:39,689 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 19:26:21] 2026-01-09 18:25:39,690 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 19:26:21] 2026-01-09 18:25:39,690 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 19:26:21] 2026-01-09 18:25:39,690 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 19:26:21] 2026-01-09 18:25:39,690 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 19:26:21] 2026-01-09 18:25:39,690 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 19:26:21] 2026-01-09 18:25:39,690 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 19:26:21] 2026-01-09 18:25:39,690 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 19:26:21] 2026-01-09 18:25:39,690 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 19:26:21] 2026-01-09 18:25:39,690 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 19:26:21] 2026-01-09 18:25:39,691 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 19:26:21] 2026-01-09 18:25:39,691 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 19:26:21] 2026-01-09 18:25:39,691 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 19:26:21] 2026-01-09 18:25:39,691 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 19:26:21] 2026-01-09 18:25:39,691 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 19:26:21] 2026-01-09 18:25:39,691 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 19:26:21] 2026-01-09 18:25:39,692 | INFO     | job 6963162202 has completed (purged errors)
[2026-01-09 19:26:21] 2026-01-09 18:25:39,692 | INFO     | overall cleanup function is called
[2026-01-09 19:26:21] 2026-01-09 18:25:40,700 | INFO     | --- collectZombieJob: --- 10, [15220]
[2026-01-09 19:26:21] 2026-01-09 18:25:40,700 | INFO     | zombie collector waiting for pid 15220
[2026-01-09 19:26:21] 2026-01-09 18:25:40,701 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 19:26:21] 2026-01-09 18:25:40,701 | INFO     | collected zombie processes
[2026-01-09 19:26:21] 2026-01-09 18:25:40,701 | INFO     | will attempt to kill all subprocesses of pid=15220
[2026-01-09 19:26:21] 2026-01-09 18:25:40,766 | INFO     | process IDs to be killed: [15220] (in reverse order)
[2026-01-09 19:26:21] 2026-01-09 18:25:40,816 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 19:26:21] 2026-01-09 18:25:40,816 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 19:26:21] 2026-01-09 18:25:40,818 | INFO     | did not find any defunct processes belonging to 15220
[2026-01-09 19:26:21] 2026-01-09 18:25:40,820 | INFO     | did not find any defunct processes belonging to 15220
[2026-01-09 19:26:21] 2026-01-09 18:25:40,820 | INFO     | ready for new job
[2026-01-09 19:26:21] 2026-01-09 18:25:40,820 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 19:26:21] 2026-01-09 18:25:40,822 | INFO     | ***************************************
[2026-01-09 19:26:21] 2026-01-09 18:25:40,822 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 19:26:21] 2026-01-09 18:25:40,822 | INFO     | ***************************************
[2026-01-09 19:26:21] 2026-01-09 18:25:40,822 | INFO     | 
[2026-01-09 19:26:21] 2026-01-09 18:25:40,823 | INFO     | pilot is running in a VM
[2026-01-09 19:26:21] 2026-01-09 18:25:40,823 | INFO     | architecture information:
[2026-01-09 19:26:21] 2026-01-09 18:25:40,824 | INFO     | executing command: cat /etc/os-release
[2026-01-09 19:26:21] 2026-01-09 18:25:40,842 | INFO     | cat /etc/os-release:
[2026-01-09 19:26:21] NAME="CentOS Linux"
[2026-01-09 19:26:21] VERSION="7 (Core)"
[2026-01-09 19:26:21] ID="centos"
[2026-01-09 19:26:21] ID_LIKE="rhel fedora"
[2026-01-09 19:26:21] VERSION_ID="7"
[2026-01-09 19:26:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 19:26:21] ANSI_COLOR="0;31"
[2026-01-09 19:26:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 19:26:21] HOME_URL="https://www.centos.org/"
[2026-01-09 19:26:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 19:26:21] 
[2026-01-09 19:26:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 19:26:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 19:26:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 19:26:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 19:26:21] 
[2026-01-09 19:26:21] 2026-01-09 18:25:40,842 | INFO     | ***************************************
[2026-01-09 19:26:21] 2026-01-09 18:25:41,345 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2026-01-09 19:26:21] 2026-01-09 18:25:41,364 | INFO     | sufficient remaining disk space (498075697152 B)
[2026-01-09 19:26:21] 2026-01-09 18:25:41,365 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 19:26:21] 2026-01-09 18:25:41,365 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 19:26:21] 2026-01-09 18:25:41,365 | INFO     | update_server=False
[2026-01-09 19:26:21] 2026-01-09 18:25:41,365 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 19:26:21] 2026-01-09 18:25:41,366 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 19:26:21] 2026-01-09 18:25:41,918 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 19:26:21] 2026-01-09 18:25:41,956 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 19:26:21] 2026-01-09 18:25:41,956 | INFO     | aborting loop
[2026-01-09 19:26:21] 2026-01-09 18:25:42,002 | INFO     | all data control threads have been joined
[2026-01-09 19:26:21] 2026-01-09 18:25:42,021 | INFO     | all payload control threads have been joined
[2026-01-09 19:26:21] 2026-01-09 18:25:42,048 | INFO     | all job control threads have been joined
[2026-01-09 19:26:21] 2026-01-09 18:25:42,371 | INFO     | [job] retrieve thread has finished
[2026-01-09 19:26:21] 2026-01-09 18:25:42,372 | INFO     | [job] queue monitor thread has finished
[2026-01-09 19:26:21] 2026-01-09 18:25:42,527 | INFO     | [job] validate thread has finished
[2026-01-09 19:26:21] 2026-01-09 18:25:42,555 | INFO     | [data] copytool_in thread has finished
[2026-01-09 19:26:21] 2026-01-09 18:25:42,810 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 19:26:21] 2026-01-09 18:25:42,961 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 19:26:21] 2026-01-09 18:25:42,962 | INFO     | [job] job monitor thread has finished
[2026-01-09 19:26:21] 2026-01-09 18:25:43,002 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 19:26:21] 2026-01-09 18:25:43,005 | INFO     | [data] control thread has finished
[2026-01-09 19:26:21] 2026-01-09 18:25:43,027 | INFO     | [payload] control thread has finished
[2026-01-09 19:26:21] 2026-01-09 18:25:43,054 | INFO     | [job] control thread has finished
[2026-01-09 19:26:21] 2026-01-09 18:25:43,239 | INFO     | [payload] failed_post thread has finished
[2026-01-09 19:26:21] 2026-01-09 18:25:43,426 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 19:26:21] 2026-01-09 18:25:43,849 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 19:26:21] 2026-01-09 18:25:43,924 | INFO     | [data] copytool_out thread has finished
[2026-01-09 19:26:21] 2026-01-09 18:25:43,947 | INFO     | [payload] validate_post thread has finished
[2026-01-09 19:26:21] 2026-01-09 18:25:47,430 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 19:26:21] 2026-01-09 18:26:10,866 | INFO     | PID=8772 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 19:26:21] 2026-01-09 18:26:10,867 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 19:26:21] 2026-01-09 18:26:10,867 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 19:26:21] 2026-01-09 18:26:10,867 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 19:26:21] 2026-01-09 18:26:15,149 | INFO     | [monitor] cgroup control has ended
[2026-01-09 19:26:21] 2026-01-09 18:26:16,249 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140318826243904)>', '<ExcThread(monitor, started 140318225708800)>']
[2026-01-09 19:26:21] 2026-01-09 18:26:16,898 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 19:26:21] 2026-01-09 18:26:16,899 | INFO     | [monitor] control thread has ended
[2026-01-09 19:26:21] 2026-01-09 18:26:21,277 | INFO     | all workflow threads have been joined
[2026-01-09 19:26:21] 2026-01-09 18:26:21,278 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 19:26:21] 2026-01-09 18:26:21,278 | INFO     | traces error code: 0
[2026-01-09 19:26:21] 2026-01-09 18:26:21,278 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 19:26:21] 2026-01-09 18:26:21,422 [wrapper] ==== pilot stdout END ====
[2026-01-09 19:26:21] 2026-01-09 18:26:21,426 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 19:26:21] 2026-01-09 18:26:21,433 [wrapper] pilotpid: 8772
[2026-01-09 19:26:21] 2026-01-09 18:26:21,439 [wrapper] Pilot exit status: 0
[2026-01-09 19:26:21] 2026-01-09 18:26:21,467 [wrapper] pandaids: 6963162202
[2026-01-09 19:26:21] 2026-01-09 18:26:21,537 [wrapper] cleanup supervisor_pilot  1978 8773
[2026-01-09 19:26:21] 2026-01-09 18:26:21,545 [wrapper] Test setup, not cleaning
[2026-01-09 19:26:21] 2026-01-09 18:26:21,550 [wrapper] apfmon messages muted
[2026-01-09 19:26:21] 2026-01-09 18:26:21,556 [wrapper] ==== wrapper stdout END ====
[2026-01-09 19:26:21] 2026-01-09 18:26:21,560 [wrapper] ==== wrapper stderr END ====
[2026-01-09 19:26:21]  *** Error codes and diagnostics ***
[2026-01-09 19:26:21]     "exeErrorCode": 0,
[2026-01-09 19:26:21]     "exeErrorDiag": "",
[2026-01-09 19:26:21]     "pilotErrorCode": 0,
[2026-01-09 19:26:21]     "pilotErrorDiag": "",
[2026-01-09 19:26:21]  *** Listing of results directory ***
[2026-01-09 19:26:21] total 446516
[2026-01-09 19:26:21] -rw-r--r--. 1 boinc boinc    579449 Jan  8 22:44 pilot3.tar.gz
[2026-01-09 19:26:21] -rwx------. 1 boinc boinc     36322 Jan  8 22:49 runpilot2-wrapper.sh
[2026-01-09 19:26:21] -rw-r--r--. 1 boinc boinc      5112 Jan  8 22:51 queuedata.json
[2026-01-09 19:26:21] -rw-r--r--. 1 boinc boinc       100 Jan  9 16:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 19:26:21] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 16:34 run_atlas
[2026-01-09 19:26:21] -rw-r--r--. 1 boinc boinc       105 Jan  9 16:34 job.xml
[2026-01-09 19:26:21] -rw-r--r--. 2 boinc boinc 225000030 Jan  9 16:34 EVNT.47898824._001242.pool.root.1
[2026-01-09 19:26:21] -rw-r--r--. 1 boinc boinc      6393 Jan  9 16:34 init_data.xml
[2026-01-09 19:26:21] -rw-r--r--. 2 boinc boinc     15847 Jan  9 16:34 start_atlas.sh
[2026-01-09 19:26:21] drwxrwx--x. 2 boinc boinc        68 Jan  9 16:34 shared
[2026-01-09 19:26:21] -rw-r--r--. 2 boinc boinc    592402 Jan  9 16:34 input.tar.gz
[2026-01-09 19:26:21] -rw-r--r--. 1 boinc boinc         0 Jan  9 16:34 boinc_lockfile
[2026-01-09 19:26:21] -rw-r--r--. 1 boinc boinc      2519 Jan  9 16:34 pandaJob.out
[2026-01-09 19:26:21] -rw-------. 1 boinc boinc    989377 Jan  9 16:34 agis_schedconf.cvmfs.json
[2026-01-09 19:26:21] -rw-------. 1 boinc boinc   1516240 Jan  9 16:34 agis_ddmendpoints.agis.ALL.json
[2026-01-09 19:26:21] drwx------. 5 boinc boinc      4096 Jan  9 16:34 pilot3
[2026-01-09 19:26:21] -rw-------. 1 boinc boinc 224788752 Jan  9 19:24 HITS.47898826._033829.pool.root.1
[2026-01-09 19:26:21] -rw-r--r--. 1 boinc boinc       531 Jan  9 19:25 boinc_task_state.xml
[2026-01-09 19:26:21] -rw-------. 1 boinc boinc      1018 Jan  9 19:25 memory_monitor_summary.json
[2026-01-09 19:26:21] -rw-------. 1 boinc boinc    392459 Jan  9 19:25 log.47898826._033829.job.log.tgz.1
[2026-01-09 19:26:21] -rw-------. 1 boinc boinc      7781 Jan  9 19:25 heartbeat.json
[2026-01-09 19:26:21] -rw-r--r--. 1 boinc boinc        28 Jan  9 19:26 wrapper_checkpoint.txt
[2026-01-09 19:26:21] -rw-r--r--. 1 boinc boinc      8192 Jan  9 19:26 boinc_mmap_file
[2026-01-09 19:26:21] -rw-------. 1 boinc boinc        95 Jan  9 19:26 pilot_heartbeat.json
[2026-01-09 19:26:21] -rw-------. 1 boinc boinc      4809 Jan  9 19:26 pilotlog.txt
[2026-01-09 19:26:21] -rw-------. 1 boinc boinc   1378939 Jan  9 19:26 log.47898826._033829.job.log.1
[2026-01-09 19:26:21] -rw-------. 1 boinc boinc       357 Jan  9 19:26 output.list
[2026-01-09 19:26:21] -rw-r--r--. 1 boinc boinc       620 Jan  9 19:26 runtime_log
[2026-01-09 19:26:21] -rw-------. 1 boinc boinc   1792000 Jan  9 19:26 result.tar.gz
[2026-01-09 19:26:21] -rw-r--r--. 1 boinc boinc      8833 Jan  9 19:26 runtime_log.err
[2026-01-09 19:26:21] -rw-------. 1 boinc boinc       655 Jan  9 19:26 9GAMDmy3Cy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmgRgKDm6h3Frn.diag
[2026-01-09 19:26:21] -rw-r--r--. 1 boinc boinc     20750 Jan  9 19:26 stderr.txt
[2026-01-09 19:26:21] HITS file was successfully produced:
[2026-01-09 19:26:21] -rw-------. 1 boinc boinc 224788752 Jan  9 19:24 shared/HITS.pool.root.1
[2026-01-09 19:26:21]  *** Contents of shared directory: ***
[2026-01-09 19:26:21] total 441600
[2026-01-09 19:26:21] -rw-r--r--. 2 boinc boinc 225000030 Jan  9 16:34 ATLAS.root_0
[2026-01-09 19:26:21] -rw-r--r--. 2 boinc boinc     15847 Jan  9 16:34 start_atlas.sh
[2026-01-09 19:26:21] -rw-r--r--. 2 boinc boinc    592402 Jan  9 16:34 input.tar.gz
[2026-01-09 19:26:21] -rw-------. 1 boinc boinc 224788752 Jan  9 19:24 HITS.pool.root.1
[2026-01-09 19:26:21] -rw-------. 1 boinc boinc   1792000 Jan  9 19:26 result.tar.gz
19:26:23 (5040): run_atlas exited; CPU time 76501.870290
19:26:23 (5040): called boinc_finish(0)

</stderr_txt>
]]>

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