Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:58:38 (13817): wrapper (7.7.26015): starting
16:58:38 (13817): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 16:58:38] Arguments: --nthreads 8
[2026-01-09 16:58:38] Threads: 8
[2026-01-09 16:58:38] Checking for CVMFS
[2026-01-09 16:58:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 16:58:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 16:58:38] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 16:58:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 16:58:38] 2.11.2.0 7091 35626 96148 154948 2 57 17626830 25165824 0 130560 0 16280763 99.810 9237571 3300 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 16:58:38] CVMFS is ok
[2026-01-09 16:58:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 16:58:38] Checking for apptainer binary...
[2026-01-09 16:58:38] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 16:58:38] Running /usr/bin/apptainer --version
[2026-01-09 16:58:38] apptainer version 1.3.2-1.el7
[2026-01-09 16:58:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 16:58:40] cg-vwn433.simple-grid.lan
[2026-01-09 16:58:40] apptainer works
[2026-01-09 16:58:40] Set ATHENA_PROC_NUMBER=8
[2026-01-09 16:58:40] Set ATHENA_CORE_NUMBER=8
[2026-01-09 16:58:40] Starting ATLAS job with PandaID=6963156622
[2026-01-09 16:58:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 19:50:17]  *** The last 200 lines of the pilot log: ***
[2026-01-09 19:50:17] 2026-01-09 18:49:13,311 | INFO     | intersect: -25099775453.153225
[2026-01-09 19:50:17] 2026-01-09 18:49:13,311 | INFO     | chi2: 1.49270037670517
[2026-01-09 19:50:17] 2026-01-09 18:49:13,312 | INFO     | sum of square deviations: 1318277740.5
[2026-01-09 19:50:17] 2026-01-09 18:49:13,313 | INFO     | sum of deviations: 19859000729.0
[2026-01-09 19:50:17] 2026-01-09 18:49:13,313 | INFO     | mean x: 1767979274.5
[2026-01-09 19:50:17] 2026-01-09 18:49:13,313 | INFO     | mean y: 2486125.061728395
[2026-01-09 19:50:17] 2026-01-09 18:49:13,313 | INFO     | intersect: -26630977084.16735
[2026-01-09 19:50:17] 2026-01-09 18:49:13,314 | INFO     | chi2: 1.494165538606534
[2026-01-09 19:50:17] 2026-01-09 18:49:13,314 | INFO     | current chi2=1.494165538606534 (change=-0.09815512370928484 %)
[2026-01-09 19:50:17] 2026-01-09 18:49:13,314 | INFO     | right removable region: 161
[2026-01-09 19:50:17] 2026-01-09 18:49:13,314 | INFO     | sum of square deviations: 1318277740.5
[2026-01-09 19:50:17] 2026-01-09 18:49:13,315 | INFO     | sum of deviations: -4044492089.0
[2026-01-09 19:50:17] 2026-01-09 18:49:13,316 | INFO     | mean x: 1767979579.5
[2026-01-09 19:50:17] 2026-01-09 18:49:13,316 | INFO     | mean y: 2516221.925925926
[2026-01-09 19:50:17] 2026-01-09 18:49:13,316 | INFO     | intersect: 5426699004.599026
[2026-01-09 19:50:17] 2026-01-09 18:49:13,316 | INFO     | chi2: 0.06717112712467102
[2026-01-09 19:50:17] 2026-01-09 18:49:13,316 | INFO     | current chi2=0.06717112712467102 (change=95.50002611555993 %)
[2026-01-09 19:50:17] 2026-01-09 18:49:13,317 | INFO     | sum of square deviations: 1199940638.0
[2026-01-09 19:50:17] 2026-01-09 18:49:13,318 | INFO     | sum of deviations: -462503525.0000006
[2026-01-09 19:50:17] 2026-01-09 18:49:13,318 | INFO     | mean x: 1767979732.0
[2026-01-09 19:50:17] 2026-01-09 18:49:13,318 | INFO     | mean y: 2511550.9044585987
[2026-01-09 19:50:17] 2026-01-09 18:49:13,318 | INFO     | intersect: 683959309.471459
[2026-01-09 19:50:17] 2026-01-09 18:49:13,318 | INFO     | chi2: 0.04069523724100932
[2026-01-09 19:50:17] 2026-01-09 18:49:13,319 | INFO     | current chi2=0.04069523724100932 (change=39.41558079637684 %)
[2026-01-09 19:50:17] 2026-01-09 18:49:13,319 | INFO     | sum of square deviations: 1088905998.0
[2026-01-09 19:50:17] 2026-01-09 18:49:13,320 | INFO     | sum of deviations: 3879427431.0000005
[2026-01-09 19:50:17] 2026-01-09 18:49:13,320 | INFO     | mean x: 1767979884.5
[2026-01-09 19:50:17] 2026-01-09 18:49:13,320 | INFO     | mean y: 2505634.1578947366
[2026-01-09 19:50:17] 2026-01-09 18:49:13,320 | INFO     | intersect: -6296247126.85455
[2026-01-09 19:50:17] 2026-01-09 18:49:13,321 | INFO     | chi2: 0.0011657552055542957
[2026-01-09 19:50:17] 2026-01-09 18:49:13,321 | INFO     | current chi2=0.0011657552055542957 (change=97.13540137719227 %)
[2026-01-09 19:50:17] 2026-01-09 18:49:13,321 | INFO     | sum of square deviations: 984941258.0
[2026-01-09 19:50:17] 2026-01-09 18:49:13,322 | INFO     | sum of deviations: 3096995315.0
[2026-01-09 19:50:17] 2026-01-09 18:49:13,322 | INFO     | mean x: 1767980037.0
[2026-01-09 19:50:17] 2026-01-09 18:49:13,322 | INFO     | mean y: 2506778.231292517
[2026-01-09 19:50:17] 2026-01-09 18:49:13,323 | INFO     | intersect: -5556632761.44116
[2026-01-09 19:50:17] 2026-01-09 18:49:13,323 | INFO     | chi2: 0.0008466144459656626
[2026-01-09 19:50:17] 2026-01-09 18:49:13,323 | INFO     | current chi2=0.0008466144459656626 (change=27.37631005789825 %)
[2026-01-09 19:50:17] 2026-01-09 18:49:13,323 | INFO     | sum of square deviations: 887813855.5
[2026-01-09 19:50:17] 2026-01-09 18:49:13,324 | INFO     | sum of deviations: 2579879526.9999995
[2026-01-09 19:50:17] 2026-01-09 18:49:13,324 | INFO     | mean x: 1767980189.5
[2026-01-09 19:50:17] 2026-01-09 18:49:13,325 | INFO     | mean y: 2507589.7464788733
[2026-01-09 19:50:17] 2026-01-09 18:49:13,325 | INFO     | intersect: -5135028693.085986
[2026-01-09 19:50:17] 2026-01-09 18:49:13,325 | INFO     | chi2: 0.0007643045723879779
[2026-01-09 19:50:17] 2026-01-09 18:49:13,325 | INFO     | current chi2=0.0007643045723879779 (change=9.722238259683923 %)
[2026-01-09 19:50:17] 2026-01-09 18:49:13,325 | INFO     | left removable region: 50
[2026-01-09 19:50:17] 2026-01-09 18:49:13,325 | INFO     | sum of square deviations: 424045160.0
[2026-01-09 19:50:17] 2026-01-09 18:49:13,326 | INFO     | sum of deviations: 774839567.9999994
[2026-01-09 19:50:17] 2026-01-09 18:49:13,326 | INFO     | mean x: 1767980769.0
[2026-01-09 19:50:17] 2026-01-09 18:49:13,326 | INFO     | mean y: 2510973.5675675673
[2026-01-09 19:50:17] 2026-01-09 18:49:13,327 | INFO     | intersect: -3228044600.476166
[2026-01-09 19:50:17] 2026-01-09 18:49:13,327 | INFO     | chi2: 0.00041926505153716385
[2026-01-09 19:50:17] 2026-01-09 18:49:13,327 | INFO     | current memory leak: 1.83 B/s (using 111 data points, chi2=0.00)
[2026-01-09 19:50:17] 2026-01-09 18:49:13,328 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-01-09 19:50:17] 2026-01-09 18:49:13,328 | INFO     | ..............................
[2026-01-09 19:50:17] 2026-01-09 18:49:13,328 | INFO     | . Timing measurements:
[2026-01-09 19:50:17] 2026-01-09 18:49:13,328 | INFO     | . get job = 0 s
[2026-01-09 19:50:17] 2026-01-09 18:49:13,328 | INFO     | . initial setup = 1 s
[2026-01-09 19:50:17] 2026-01-09 18:49:13,329 | INFO     | . payload setup = 6 s
[2026-01-09 19:50:17] 2026-01-09 18:49:13,329 | INFO     | . stage-in = 0 s
[2026-01-09 19:50:17] 2026-01-09 18:49:13,329 | INFO     | . payload execution = 10184 s
[2026-01-09 19:50:17] 2026-01-09 18:49:13,329 | INFO     | . stage-out = 1 s
[2026-01-09 19:50:17] 2026-01-09 18:49:13,329 | INFO     | . log creation = 0 s
[2026-01-09 19:50:17] 2026-01-09 18:49:13,329 | INFO     | ..............................
[2026-01-09 19:50:17] 2026-01-09 18:49:13,444 | INFO     | 
[2026-01-09 19:50:17] 2026-01-09 18:49:13,444 | INFO     | job summary report
[2026-01-09 19:50:17] 2026-01-09 18:49:13,444 | INFO     | --------------------------------------------------
[2026-01-09 19:50:17] 2026-01-09 18:49:13,444 | INFO     | PanDA job id: 6963156622
[2026-01-09 19:50:17] 2026-01-09 18:49:13,444 | INFO     | task id: 47898826
[2026-01-09 19:50:17] 2026-01-09 18:49:13,444 | INFO     | errors: (none)
[2026-01-09 19:50:17] 2026-01-09 18:49:13,445 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 19:50:17] 2026-01-09 18:49:13,445 | INFO     | pilot state: finished 
[2026-01-09 19:50:17] 2026-01-09 18:49:13,445 | INFO     | transexitcode: 0
[2026-01-09 19:50:17] 2026-01-09 18:49:13,445 | INFO     | exeerrorcode: 0
[2026-01-09 19:50:17] 2026-01-09 18:49:13,445 | INFO     | exeerrordiag: 
[2026-01-09 19:50:17] 2026-01-09 18:49:13,445 | INFO     | exitcode: 0
[2026-01-09 19:50:17] 2026-01-09 18:49:13,445 | INFO     | exitmsg: OK
[2026-01-09 19:50:17] 2026-01-09 18:49:13,445 | INFO     | cpuconsumptiontime: 77267 s
[2026-01-09 19:50:17] 2026-01-09 18:49:13,445 | INFO     | nevents: 400
[2026-01-09 19:50:17] 2026-01-09 18:49:13,445 | INFO     | neventsw: 0
[2026-01-09 19:50:17] 2026-01-09 18:49:13,446 | INFO     | pid: 23994
[2026-01-09 19:50:17] 2026-01-09 18:49:13,446 | INFO     | pgrp: 23994
[2026-01-09 19:50:17] 2026-01-09 18:49:13,446 | INFO     | corecount: 8
[2026-01-09 19:50:17] 2026-01-09 18:49:13,446 | INFO     | event service: False
[2026-01-09 19:50:17] 2026-01-09 18:49:13,446 | INFO     | sizes: {0: 2283971, 5: 2284233, 11: 2284289, 10194: 2312789, 10195: 2312788, 10196: 2321842, 10197: 2322026, 10203: 2322284}
[2026-01-09 19:50:17] 2026-01-09 18:49:13,446 | INFO     | --------------------------------------------------
[2026-01-09 19:50:17] 2026-01-09 18:49:13,446 | INFO     | 
[2026-01-09 19:50:17] 2026-01-09 18:49:13,446 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-01-09 19:50:17] 2026-01-09 18:49:13,470 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 19:50:17] 2026-01-09 18:49:13,471 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 19:50:17] 2026-01-09 18:49:13,471 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 19:50:17] 2026-01-09 18:49:13,471 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 19:50:17] 2026-01-09 18:49:13,471 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 19:50:17] 2026-01-09 18:49:13,471 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 19:50:17] 2026-01-09 18:49:13,471 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 19:50:17] 2026-01-09 18:49:13,471 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 19:50:17] 2026-01-09 18:49:13,471 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 19:50:17] 2026-01-09 18:49:13,472 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 19:50:17] 2026-01-09 18:49:13,472 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 19:50:17] 2026-01-09 18:49:13,472 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 19:50:17] 2026-01-09 18:49:13,472 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 19:50:17] 2026-01-09 18:49:13,472 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 19:50:17] 2026-01-09 18:49:13,472 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 19:50:17] 2026-01-09 18:49:13,472 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 19:50:17] 2026-01-09 18:49:13,473 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 19:50:17] 2026-01-09 18:49:13,473 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 19:50:17] 2026-01-09 18:49:13,473 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 19:50:17] 2026-01-09 18:49:13,473 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 19:50:17] 2026-01-09 18:49:13,473 | INFO     | job 6963156622 has completed (purged errors)
[2026-01-09 19:50:17] 2026-01-09 18:49:13,473 | INFO     | overall cleanup function is called
[2026-01-09 19:50:17] 2026-01-09 18:49:14,482 | INFO     | --- collectZombieJob: --- 10, [23994]
[2026-01-09 19:50:17] 2026-01-09 18:49:14,482 | INFO     | zombie collector waiting for pid 23994
[2026-01-09 19:50:17] 2026-01-09 18:49:14,482 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 19:50:17] 2026-01-09 18:49:14,483 | INFO     | collected zombie processes
[2026-01-09 19:50:17] 2026-01-09 18:49:14,483 | INFO     | will attempt to kill all subprocesses of pid=23994
[2026-01-09 19:50:17] 2026-01-09 18:49:14,545 | INFO     | process IDs to be killed: [23994] (in reverse order)
[2026-01-09 19:50:17] 2026-01-09 18:49:14,590 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 19:50:17] 2026-01-09 18:49:14,590 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 19:50:17] 2026-01-09 18:49:14,592 | INFO     | did not find any defunct processes belonging to 23994
[2026-01-09 19:50:17] 2026-01-09 18:49:14,594 | INFO     | did not find any defunct processes belonging to 23994
[2026-01-09 19:50:17] 2026-01-09 18:49:14,594 | INFO     | ready for new job
[2026-01-09 19:50:17] 2026-01-09 18:49:14,594 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 19:50:17] 2026-01-09 18:49:14,596 | INFO     | ***************************************
[2026-01-09 19:50:17] 2026-01-09 18:49:14,596 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 19:50:17] 2026-01-09 18:49:14,596 | INFO     | ***************************************
[2026-01-09 19:50:17] 2026-01-09 18:49:14,596 | INFO     | 
[2026-01-09 19:50:17] 2026-01-09 18:49:14,597 | INFO     | pilot is running in a VM
[2026-01-09 19:50:17] 2026-01-09 18:49:14,597 | INFO     | architecture information:
[2026-01-09 19:50:17] 2026-01-09 18:49:14,597 | INFO     | executing command: cat /etc/os-release
[2026-01-09 19:50:17] 2026-01-09 18:49:14,615 | INFO     | cat /etc/os-release:
[2026-01-09 19:50:17] NAME="CentOS Linux"
[2026-01-09 19:50:17] VERSION="7 (Core)"
[2026-01-09 19:50:17] ID="centos"
[2026-01-09 19:50:17] ID_LIKE="rhel fedora"
[2026-01-09 19:50:17] VERSION_ID="7"
[2026-01-09 19:50:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 19:50:17] ANSI_COLOR="0;31"
[2026-01-09 19:50:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 19:50:17] HOME_URL="https://www.centos.org/"
[2026-01-09 19:50:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 19:50:17] 
[2026-01-09 19:50:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 19:50:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 19:50:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 19:50:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 19:50:17] 
[2026-01-09 19:50:17] 2026-01-09 18:49:14,615 | INFO     | ***************************************
[2026-01-09 19:50:17] 2026-01-09 18:49:15,119 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-01-09 19:50:17] 2026-01-09 18:49:15,145 | INFO     | sufficient remaining disk space (497555603456 B)
[2026-01-09 19:50:17] 2026-01-09 18:49:15,145 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 19:50:17] 2026-01-09 18:49:15,145 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 19:50:17] 2026-01-09 18:49:15,145 | INFO     | update_server=False
[2026-01-09 19:50:17] 2026-01-09 18:49:15,146 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 19:50:17] 2026-01-09 18:49:15,146 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 19:50:17] 2026-01-09 18:49:15,146 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 19:50:17] 2026-01-09 18:49:15,147 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 19:50:17] 2026-01-09 18:49:15,147 | INFO     | aborting loop
[2026-01-09 19:50:17] 2026-01-09 18:49:15,147 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-09 19:50:17] 2026-01-09 18:49:15,148 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 19:50:17] 2026-01-09 18:49:15,148 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 19:50:17] 2026-01-09 18:49:15,149 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 19:50:17] 2026-01-09 18:49:15,443 | INFO     | all payload control threads have been joined
[2026-01-09 19:50:17] 2026-01-09 18:49:15,583 | INFO     | all data control threads have been joined
[2026-01-09 19:50:17] 2026-01-09 18:49:16,056 | INFO     | all job control threads have been joined
[2026-01-09 19:50:17] 2026-01-09 18:49:16,148 | INFO     | [job] retrieve thread has finished
[2026-01-09 19:50:17] 2026-01-09 18:49:16,149 | INFO     | [job] queue monitor thread has finished
[2026-01-09 19:50:17] 2026-01-09 18:49:16,153 | INFO     | [job] job monitor thread has finished
[2026-01-09 19:50:17] 2026-01-09 18:49:16,411 | INFO     | [job] validate thread has finished
[2026-01-09 19:50:17] 2026-01-09 18:49:16,449 | INFO     | [payload] control thread has finished
[2026-01-09 19:50:17] 2026-01-09 18:49:16,480 | INFO     | [payload] validate_post thread has finished
[2026-01-09 19:50:17] 2026-01-09 18:49:16,556 | INFO     | [payload] failed_post thread has finished
[2026-01-09 19:50:17] 2026-01-09 18:49:16,589 | INFO     | [data] control thread has finished
[2026-01-09 19:50:17] 2026-01-09 18:49:16,705 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 19:50:17] 2026-01-09 18:49:16,889 | INFO     | [data] copytool_in thread has finished
[2026-01-09 19:50:17] 2026-01-09 18:49:17,061 | INFO     | [job] control thread has finished
[2026-01-09 19:50:17] 2026-01-09 18:49:17,154 | INFO     | [data] copytool_out thread has finished
[2026-01-09 19:50:17] 2026-01-09 18:49:17,276 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 19:50:17] 2026-01-09 18:49:17,383 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 19:50:17] 2026-01-09 18:49:18,349 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 19:50:17] 2026-01-09 18:49:22,356 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 19:50:17] 2026-01-09 18:49:25,317 | INFO     | job.realtimelogging is not enabled
[2026-01-09 19:50:17] 2026-01-09 18:49:26,322 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 19:50:17] 2026-01-09 18:50:10,905 | INFO     | [monitor] cgroup control has ended
[2026-01-09 19:50:17] 2026-01-09 18:50:11,826 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140381949204288)>', '<ExcThread(monitor, started 140381039605504)>']
[2026-01-09 19:50:17] 2026-01-09 18:50:12,437 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 19:50:17] 2026-01-09 18:50:12,437 | INFO     | [monitor] control thread has ended
[2026-01-09 19:50:17] 2026-01-09 18:50:16,851 | INFO     | all workflow threads have been joined
[2026-01-09 19:50:17] 2026-01-09 18:50:16,852 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 19:50:17] 2026-01-09 18:50:16,852 | INFO     | traces error code: 0
[2026-01-09 19:50:17] 2026-01-09 18:50:16,852 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 19:50:17] 2026-01-09 18:50:16,994 [wrapper] ==== pilot stdout END ====
[2026-01-09 19:50:17] 2026-01-09 18:50:16,997 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 19:50:17] 2026-01-09 18:50:17,000 [wrapper] pilotpid: 17552
[2026-01-09 19:50:17] 2026-01-09 18:50:17,004 [wrapper] Pilot exit status: 0
[2026-01-09 19:50:17] 2026-01-09 18:50:17,018 [wrapper] pandaids: 6963156622
[2026-01-09 19:50:17] 2026-01-09 18:50:17,051 [wrapper] cleanup supervisor_pilot  9280 17553
[2026-01-09 19:50:17] 2026-01-09 18:50:17,055 [wrapper] Test setup, not cleaning
[2026-01-09 19:50:17] 2026-01-09 18:50:17,059 [wrapper] apfmon messages muted
[2026-01-09 19:50:17] 2026-01-09 18:50:17,062 [wrapper] ==== wrapper stdout END ====
[2026-01-09 19:50:17] 2026-01-09 18:50:17,065 [wrapper] ==== wrapper stderr END ====
[2026-01-09 19:50:17]  *** Error codes and diagnostics ***
[2026-01-09 19:50:17]     "exeErrorCode": 0,
[2026-01-09 19:50:17]     "exeErrorDiag": "",
[2026-01-09 19:50:17]     "pilotErrorCode": 0,
[2026-01-09 19:50:17]     "pilotErrorDiag": "",
[2026-01-09 19:50:17]  *** Listing of results directory ***
[2026-01-09 19:50:17] total 446008
[2026-01-09 19:50:17] -rw-r--r--. 1 boinc boinc    579449 Jan  8 22:44 pilot3.tar.gz
[2026-01-09 19:50:17] -rwx------. 1 boinc boinc     36322 Jan  8 22:48 runpilot2-wrapper.sh
[2026-01-09 19:50:17] -rw-r--r--. 1 boinc boinc      5112 Jan  8 22:50 queuedata.json
[2026-01-09 19:50:17] -rw-r--r--. 1 boinc boinc       100 Jan  9 16:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 19:50:17] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 16:58 run_atlas
[2026-01-09 19:50:17] -rw-r--r--. 1 boinc boinc       105 Jan  9 16:58 job.xml
[2026-01-09 19:50:17] -rw-r--r--. 1 boinc boinc      6390 Jan  9 16:58 init_data.xml
[2026-01-09 19:50:17] -rw-r--r--. 2 boinc boinc 227942988 Jan  9 16:58 EVNT.47898824._001207.pool.root.1
[2026-01-09 19:50:17] -rw-r--r--. 2 boinc boinc     15847 Jan  9 16:58 start_atlas.sh
[2026-01-09 19:50:17] drwxrwx--x. 2 boinc boinc        68 Jan  9 16:58 shared
[2026-01-09 19:50:17] -rw-r--r--. 2 boinc boinc    592399 Jan  9 16:58 input.tar.gz
[2026-01-09 19:50:17] -rw-r--r--. 1 boinc boinc         0 Jan  9 16:58 boinc_lockfile
[2026-01-09 19:50:17] -rw-r--r--. 1 boinc boinc      2520 Jan  9 16:58 pandaJob.out
[2026-01-09 19:50:17] -rw-------. 1 boinc boinc    989377 Jan  9 16:58 agis_schedconf.cvmfs.json
[2026-01-09 19:50:17] -rw-------. 1 boinc boinc   1516240 Jan  9 16:58 agis_ddmendpoints.agis.ALL.json
[2026-01-09 19:50:17] drwx------. 5 boinc boinc      4096 Jan  9 16:58 pilot3
[2026-01-09 19:50:17] -rw-------. 1 boinc boinc 221299918 Jan  9 19:48 HITS.47898826._031792.pool.root.1
[2026-01-09 19:50:17] -rw-r--r--. 1 boinc boinc       531 Jan  9 19:48 boinc_task_state.xml
[2026-01-09 19:50:17] -rw-------. 1 boinc boinc      1015 Jan  9 19:49 memory_monitor_summary.json
[2026-01-09 19:50:17] -rw-------. 1 boinc boinc        95 Jan  9 19:49 pilot_heartbeat.json
[2026-01-09 19:50:17] -rw-------. 1 boinc boinc    409658 Jan  9 19:49 log.47898826._031792.job.log.tgz.1
[2026-01-09 19:50:17] -rw-------. 1 boinc boinc      7773 Jan  9 19:49 heartbeat.json
[2026-01-09 19:50:17] -rw-r--r--. 1 boinc boinc        28 Jan  9 19:50 wrapper_checkpoint.txt
[2026-01-09 19:50:17] -rw-r--r--. 1 boinc boinc      8192 Jan  9 19:50 boinc_mmap_file
[2026-01-09 19:50:17] -rw-------. 1 boinc boinc      4687 Jan  9 19:50 pilotlog.txt
[2026-01-09 19:50:17] -rw-------. 1 boinc boinc   1373510 Jan  9 19:50 log.47898826._031792.job.log.1
[2026-01-09 19:50:17] -rw-------. 1 boinc boinc       357 Jan  9 19:50 output.list
[2026-01-09 19:50:17] -rw-r--r--. 1 boinc boinc       620 Jan  9 19:50 runtime_log
[2026-01-09 19:50:17] -rw-------. 1 boinc boinc   1802240 Jan  9 19:50 result.tar.gz
[2026-01-09 19:50:17] -rw-r--r--. 1 boinc boinc      8817 Jan  9 19:50 runtime_log.err
[2026-01-09 19:50:17] -rw-------. 1 boinc boinc       655 Jan  9 19:50 9ZIMDmL3Cy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmGalKDm7VGDHm.diag
[2026-01-09 19:50:17] -rw-r--r--. 1 boinc boinc     20510 Jan  9 19:50 stderr.txt
[2026-01-09 19:50:17] HITS file was successfully produced:
[2026-01-09 19:50:17] -rw-------. 1 boinc boinc 221299918 Jan  9 19:48 shared/HITS.pool.root.1
[2026-01-09 19:50:17]  *** Contents of shared directory: ***
[2026-01-09 19:50:17] total 441076
[2026-01-09 19:50:17] -rw-r--r--. 2 boinc boinc 227942988 Jan  9 16:58 ATLAS.root_0
[2026-01-09 19:50:17] -rw-r--r--. 2 boinc boinc     15847 Jan  9 16:58 start_atlas.sh
[2026-01-09 19:50:17] -rw-r--r--. 2 boinc boinc    592399 Jan  9 16:58 input.tar.gz
[2026-01-09 19:50:17] -rw-------. 1 boinc boinc 221299918 Jan  9 19:48 HITS.pool.root.1
[2026-01-09 19:50:17] -rw-------. 1 boinc boinc   1802240 Jan  9 19:50 result.tar.gz
19:50:18 (13817): run_atlas exited; CPU time 77336.653831
19:50:18 (13817): called boinc_finish(0)

</stderr_txt>
]]>

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