Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:18:45 (1182304): wrapper (7.7.26015): starting
08:18:45 (1182304): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 08:18:45] Arguments: --nthreads 8
[2026-01-09 08:18:45] Threads: 8
[2026-01-09 08:18:45] Checking for CVMFS
[2026-01-09 08:18:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 08:18:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 08:18:45] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 08:18:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 08:18:46] 2.13.3.0 6968 22928 214896 154945 1 124 39110031 40960000 18357 16776704 0 80853198 99.593 87918401 34831 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 08:18:46] CVMFS is ok
[2026-01-09 08:18:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 08:18:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 08:18:46] Further information can be found at the LHC@home message board.
[2026-01-09 08:18:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 08:18:46] Checking for apptainer binary...
[2026-01-09 08:18:46] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 08:18:46] Running /usr/bin/apptainer --version
[2026-01-09 08:18:46] apptainer version 1.4.5-2.el9
[2026-01-09 08:18:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 08:18:47] c-212-5.aglt2.org
[2026-01-09 08:18:47] apptainer works
[2026-01-09 08:18:47] Set ATHENA_PROC_NUMBER=8
[2026-01-09 08:18:47] Set ATHENA_CORE_NUMBER=8
[2026-01-09 08:18:47] Starting ATLAS job with PandaID=6963161870
[2026-01-09 08:18:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 11:27:01]  *** The last 200 lines of the pilot log: ***
[2026-01-09 11:27:01] 2026-01-09 16:25:33,873 | INFO     | number of running child processes to parent process 1207848: 1
[2026-01-09 11:27:01] 2026-01-09 16:25:33,873 | INFO     | maximum number of monitored processes: 6
[2026-01-09 11:27:01] 2026-01-09 16:25:34,558 | INFO     | time since job start (11185s) is within the limit (349056.0s)
[2026-01-09 11:27:01] 2026-01-09 16:25:36,377 | INFO     | monitor loop #693: job 0:6963161870 is in state 'finished'
[2026-01-09 11:27:01] 2026-01-09 16:25:36,377 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 11:27:01] 2026-01-09 16:25:36,563 | INFO     | time since job start (11187s) is within the limit (349056.0s)
[2026-01-09 11:27:01] 2026-01-09 16:25:38,570 | INFO     | time since job start (11189s) is within the limit (349056.0s)
[2026-01-09 11:27:01] 2026-01-09 16:25:38,880 | INFO     | monitor loop #694: job 0:6963161870 is in state 'finished'
[2026-01-09 11:27:01] 2026-01-09 16:25:38,880 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 11:27:01] 2026-01-09 16:25:39,868 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 11:27:01] 2026-01-09 16:25:39,873 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3174.4480104166664
[2026-01-09 11:27:01] 2026-01-09 16:25:39,886 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6963161870/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 11:27:01] 2026-01-09 16:25:39,886 | INFO     | extracted standard info from prmon json
[2026-01-09 11:27:01] 2026-01-09 16:25:39,886 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 11:27:01] 2026-01-09 16:25:39,886 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 11:27:01] 2026-01-09 16:25:39,887 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 11:27:01] 2026-01-09 16:25:39,887 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 11:27:01] 2026-01-09 16:25:39,889 | INFO     | fitting pss+swap vs Time
[2026-01-09 11:27:01] 2026-01-09 16:25:39,889 | INFO     | sum of square deviations: 1900563408.601092
[2026-01-09 11:27:01] 2026-01-09 16:25:39,890 | INFO     | sum of deviations: -12924958835.355198
[2026-01-09 11:27:01] 2026-01-09 16:25:39,890 | INFO     | mean x: 1767970334.420765
[2026-01-09 11:27:01] 2026-01-09 16:25:39,890 | INFO     | mean y: 2540603.2513661203
[2026-01-09 11:27:01] 2026-01-09 16:25:39,890 | INFO     | intersect: 12025787863.039959
[2026-01-09 11:27:01] 2026-01-09 16:25:39,891 | INFO     | chi2: 1.2286468901631291
[2026-01-09 11:27:01] 2026-01-09 16:25:39,891 | INFO     | sum of square deviations: 1749017660.8988786
[2026-01-09 11:27:01] 2026-01-09 16:25:39,892 | INFO     | sum of deviations: -12104103569.22472
[2026-01-09 11:27:01] 2026-01-09 16:25:39,892 | INFO     | mean x: 1767970181.9213483
[2026-01-09 11:27:01] 2026-01-09 16:25:39,892 | INFO     | mean y: 2541429.7696629213
[2026-01-09 11:27:01] 2026-01-09 16:25:39,892 | INFO     | intersect: 12237806211.646738
[2026-01-09 11:27:01] 2026-01-09 16:25:39,892 | INFO     | chi2: 1.2282036291922154
[2026-01-09 11:27:01] 2026-01-09 16:25:39,892 | INFO     | current chi2=1.2282036291922154 (change=0.036077165413643524 %)
[2026-01-09 11:27:01] 2026-01-09 16:25:39,892 | INFO     | right removable region: 177
[2026-01-09 11:27:01] 2026-01-09 16:25:39,892 | INFO     | sum of square deviations: 1748992895.1910114
[2026-01-09 11:27:01] 2026-01-09 16:25:39,893 | INFO     | sum of deviations: -33964520085.41572
[2026-01-09 11:27:01] 2026-01-09 16:25:39,893 | INFO     | mean x: 1767970486.9325843
[2026-01-09 11:27:01] 2026-01-09 16:25:39,893 | INFO     | mean y: 2561434.882022472
[2026-01-09 11:27:01] 2026-01-09 16:25:39,894 | INFO     | intersect: 34335616348.341785
[2026-01-09 11:27:01] 2026-01-09 16:25:39,894 | INFO     | chi2: 0.08184166897350523
[2026-01-09 11:27:01] 2026-01-09 16:25:39,894 | INFO     | current chi2=0.08184166897350523 (change=93.33887794542505 %)
[2026-01-09 11:27:01] 2026-01-09 16:25:39,894 | INFO     | sum of square deviations: 1605701606.7283306
[2026-01-09 11:27:01] 2026-01-09 16:25:39,895 | INFO     | sum of deviations: -31911926538.71099
[2026-01-09 11:27:01] 2026-01-09 16:25:39,895 | INFO     | mean x: 1767970639.4450867
[2026-01-09 11:27:01] 2026-01-09 16:25:39,895 | INFO     | mean y: 2559244.3988439306
[2026-01-09 11:27:01] 2026-01-09 16:25:39,895 | INFO     | intersect: 35139442045.1365
[2026-01-09 11:27:01] 2026-01-09 16:25:39,895 | INFO     | chi2: 0.08116858628620635
[2026-01-09 11:27:01] 2026-01-09 16:25:39,895 | INFO     | current chi2=0.08116858628620635 (change=0.8224205294698651 %)
[2026-01-09 11:27:01] 2026-01-09 16:25:39,895 | INFO     | left removable region: 20
[2026-01-09 11:27:01] 2026-01-09 16:25:39,896 | INFO     | sum of square deviations: 1200085254.7898061
[2026-01-09 11:27:01] 2026-01-09 16:25:39,896 | INFO     | sum of deviations: -24812302472.808918
[2026-01-09 11:27:01] 2026-01-09 16:25:39,896 | INFO     | mean x: 1767970761.44586
[2026-01-09 11:27:01] 2026-01-09 16:25:39,896 | INFO     | mean y: 2554000.1401273888
[2026-01-09 11:27:01] 2026-01-09 16:25:39,896 | INFO     | intersect: 36556144772.95595
[2026-01-09 11:27:01] 2026-01-09 16:25:39,897 | INFO     | chi2: 0.07771379312392225
[2026-01-09 11:27:01] 2026-01-09 16:25:39,897 | INFO     | current memory leak: -20.68 B/s (using 157 data points, chi2=0.08)
[2026-01-09 11:27:01] 2026-01-09 16:25:39,897 | INFO     | could have reported an average CPU frequency of 3151 MHz (10 samples)
[2026-01-09 11:27:01] 2026-01-09 16:25:39,897 | INFO     | ..............................
[2026-01-09 11:27:01] 2026-01-09 16:25:39,897 | INFO     | . Timing measurements:
[2026-01-09 11:27:01] 2026-01-09 16:25:39,897 | INFO     | . get job = 0 s
[2026-01-09 11:27:01] 2026-01-09 16:25:39,897 | INFO     | . initial setup = 2 s
[2026-01-09 11:27:01] 2026-01-09 16:25:39,897 | INFO     | . payload setup = 8 s
[2026-01-09 11:27:01] 2026-01-09 16:25:39,897 | INFO     | . stage-in = 0 s
[2026-01-09 11:27:01] 2026-01-09 16:25:39,897 | INFO     | . payload execution = 11149 s
[2026-01-09 11:27:01] 2026-01-09 16:25:39,898 | INFO     | . stage-out = 2 s
[2026-01-09 11:27:01] 2026-01-09 16:25:39,898 | INFO     | . log creation = 0 s
[2026-01-09 11:27:01] 2026-01-09 16:25:39,898 | INFO     | ..............................
[2026-01-09 11:27:01] 2026-01-09 16:25:39,967 | INFO     | 
[2026-01-09 11:27:01] 2026-01-09 16:25:39,968 | INFO     | job summary report
[2026-01-09 11:27:01] 2026-01-09 16:25:39,968 | INFO     | --------------------------------------------------
[2026-01-09 11:27:01] 2026-01-09 16:25:39,968 | INFO     | PanDA job id: 6963161870
[2026-01-09 11:27:01] 2026-01-09 16:25:39,968 | INFO     | task id: 47898826
[2026-01-09 11:27:01] 2026-01-09 16:25:39,968 | INFO     | errors: (none)
[2026-01-09 11:27:01] 2026-01-09 16:25:39,968 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 11:27:01] 2026-01-09 16:25:39,968 | INFO     | pilot state: finished 
[2026-01-09 11:27:01] 2026-01-09 16:25:39,968 | INFO     | transexitcode: 0
[2026-01-09 11:27:01] 2026-01-09 16:25:39,968 | INFO     | exeerrorcode: 0
[2026-01-09 11:27:01] 2026-01-09 16:25:39,968 | INFO     | exeerrordiag: 
[2026-01-09 11:27:01] 2026-01-09 16:25:39,968 | INFO     | exitcode: 0
[2026-01-09 11:27:01] 2026-01-09 16:25:39,968 | INFO     | exitmsg: OK
[2026-01-09 11:27:01] 2026-01-09 16:25:39,968 | INFO     | cpuconsumptiontime: 46389 s
[2026-01-09 11:27:01] 2026-01-09 16:25:39,968 | INFO     | nevents: 400
[2026-01-09 11:27:01] 2026-01-09 16:25:39,968 | INFO     | neventsw: 0
[2026-01-09 11:27:01] 2026-01-09 16:25:39,968 | INFO     | pid: 1207848
[2026-01-09 11:27:01] 2026-01-09 16:25:39,968 | INFO     | pgrp: 1207848
[2026-01-09 11:27:01] 2026-01-09 16:25:39,968 | INFO     | corecount: 8
[2026-01-09 11:27:01] 2026-01-09 16:25:39,969 | INFO     | event service: False
[2026-01-09 11:27:01] 2026-01-09 16:25:39,969 | INFO     | sizes: {0: 2283971, 7: 2284233, 11: 2284261, 11161: 2313407, 11163: 2322405, 11164: 2322461, 11172: 2322783}
[2026-01-09 11:27:01] 2026-01-09 16:25:39,969 | INFO     | --------------------------------------------------
[2026-01-09 11:27:01] 2026-01-09 16:25:39,969 | INFO     | 
[2026-01-09 11:27:01] 2026-01-09 16:25:39,969 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-09 11:27:01] 2026-01-09 16:25:39,987 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 11:27:01] 2026-01-09 16:25:39,991 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 11:27:01] 2026-01-09 16:25:39,991 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 11:27:01] 2026-01-09 16:25:39,991 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 11:27:01] 2026-01-09 16:25:39,991 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 11:27:01] 2026-01-09 16:25:39,991 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 11:27:01] 2026-01-09 16:25:39,991 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 11:27:01] 2026-01-09 16:25:39,991 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 11:27:01] 2026-01-09 16:25:39,991 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 11:27:01] 2026-01-09 16:25:39,991 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 11:27:01] 2026-01-09 16:25:39,991 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 11:27:01] 2026-01-09 16:25:39,991 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 11:27:01] 2026-01-09 16:25:39,991 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 11:27:01] 2026-01-09 16:25:39,991 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 11:27:01] 2026-01-09 16:25:39,991 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 11:27:01] 2026-01-09 16:25:39,991 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 11:27:01] 2026-01-09 16:25:39,991 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 11:27:01] 2026-01-09 16:25:39,992 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 11:27:01] 2026-01-09 16:25:39,992 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 11:27:01] 2026-01-09 16:25:39,992 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 11:27:01] 2026-01-09 16:25:39,992 | INFO     | job 6963161870 has completed (purged errors)
[2026-01-09 11:27:01] 2026-01-09 16:25:39,992 | INFO     | overall cleanup function is called
[2026-01-09 11:27:01] 2026-01-09 16:25:40,999 | INFO     | --- collectZombieJob: --- 10, [1207848]
[2026-01-09 11:27:01] 2026-01-09 16:25:40,999 | INFO     | zombie collector waiting for pid 1207848
[2026-01-09 11:27:01] 2026-01-09 16:25:41,000 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 11:27:01] 2026-01-09 16:25:41,000 | INFO     | collected zombie processes
[2026-01-09 11:27:01] 2026-01-09 16:25:41,000 | INFO     | will attempt to kill all subprocesses of pid=1207848
[2026-01-09 11:27:01] 2026-01-09 16:25:41,520 | INFO     | process IDs to be killed: [1207848] (in reverse order)
[2026-01-09 11:27:01] 2026-01-09 16:25:41,732 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 11:27:01] 2026-01-09 16:25:41,732 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 11:27:01] 2026-01-09 16:25:41,751 | INFO     | did not find any defunct processes belonging to 1207848
[2026-01-09 11:27:01] 2026-01-09 16:25:41,769 | INFO     | did not find any defunct processes belonging to 1207848
[2026-01-09 11:27:01] 2026-01-09 16:25:41,769 | INFO     | ready for new job
[2026-01-09 11:27:01] 2026-01-09 16:25:41,769 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 11:27:01] 2026-01-09 16:25:41,771 | INFO     | ***************************************
[2026-01-09 11:27:01] 2026-01-09 16:25:41,771 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 11:27:01] 2026-01-09 16:25:41,771 | INFO     | ***************************************
[2026-01-09 11:27:01] 2026-01-09 16:25:41,771 | INFO     | 
[2026-01-09 11:27:01] 2026-01-09 16:25:41,776 | INFO     | architecture information:
[2026-01-09 11:27:01] 2026-01-09 16:25:41,780 | INFO     | executing command: cat /etc/os-release
[2026-01-09 11:27:01] 2026-01-09 16:25:41,795 | INFO     | cat /etc/os-release:
[2026-01-09 11:27:01] NAME="CentOS Linux"
[2026-01-09 11:27:01] VERSION="7 (Core)"
[2026-01-09 11:27:01] ID="centos"
[2026-01-09 11:27:01] ID_LIKE="rhel fedora"
[2026-01-09 11:27:01] VERSION_ID="7"
[2026-01-09 11:27:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 11:27:01] ANSI_COLOR="0;31"
[2026-01-09 11:27:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 11:27:01] HOME_URL="https://www.centos.org/"
[2026-01-09 11:27:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 11:27:01] 
[2026-01-09 11:27:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 11:27:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 11:27:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 11:27:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 11:27:01] 
[2026-01-09 11:27:01] 2026-01-09 16:25:41,795 | INFO     | ***************************************
[2026-01-09 11:27:01] 2026-01-09 16:25:42,297 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-09 11:27:01] 2026-01-09 16:25:42,328 | INFO     | sufficient remaining disk space (127084265472 B)
[2026-01-09 11:27:01] 2026-01-09 16:25:42,328 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 11:27:01] 2026-01-09 16:25:42,329 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 11:27:01] 2026-01-09 16:25:42,329 | INFO     | update_server=False
[2026-01-09 11:27:01] 2026-01-09 16:25:42,329 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 11:27:01] 2026-01-09 16:25:42,389 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 11:27:01] 2026-01-09 16:25:42,389 | INFO     | aborting loop
[2026-01-09 11:27:01] 2026-01-09 16:25:42,551 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 11:27:01] 2026-01-09 16:25:42,575 | INFO     | all payload control threads have been joined
[2026-01-09 11:27:01] 2026-01-09 16:25:42,634 | INFO     | all data control threads have been joined
[2026-01-09 11:27:01] 2026-01-09 16:25:42,859 | INFO     | all job control threads have been joined
[2026-01-09 11:27:01] 2026-01-09 16:25:43,334 | INFO     | [job] retrieve thread has finished
[2026-01-09 11:27:01] 2026-01-09 16:25:43,394 | INFO     | [job] job monitor thread has finished
[2026-01-09 11:27:01] 2026-01-09 16:25:43,581 | INFO     | [payload] control thread has finished
[2026-01-09 11:27:01] 2026-01-09 16:25:43,640 | INFO     | [data] control thread has finished
[2026-01-09 11:27:01] 2026-01-09 16:25:43,681 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 11:27:01] 2026-01-09 16:25:43,694 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 11:27:01] 2026-01-09 16:25:43,865 | INFO     | [job] control thread has finished
[2026-01-09 11:27:01] 2026-01-09 16:25:44,075 | INFO     | [payload] validate_post thread has finished
[2026-01-09 11:27:01] 2026-01-09 16:25:44,308 | INFO     | [job] validate thread has finished
[2026-01-09 11:27:01] 2026-01-09 16:25:44,421 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 11:27:01] 2026-01-09 16:25:44,549 | INFO     | [data] copytool_in thread has finished
[2026-01-09 11:27:01] 2026-01-09 16:25:44,562 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 11:27:01] 2026-01-09 16:25:44,567 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 11:27:01] 2026-01-09 16:25:44,626 | INFO     | [payload] failed_post thread has finished
[2026-01-09 11:27:01] 2026-01-09 16:25:44,979 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 11:27:01] 2026-01-09 16:25:45,700 | INFO     | [data] copytool_out thread has finished
[2026-01-09 11:27:01] 2026-01-09 16:25:45,985 | INFO     | [job] queue monitor thread has finished
[2026-01-09 11:27:01] 2026-01-09 16:25:46,559 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 11:27:01] 2026-01-09 16:26:12,128 | INFO     | PID=1191361 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 11:27:01] 2026-01-09 16:26:12,129 | INFO     | .. there are 22 such processes running
[2026-01-09 11:27:01] 2026-01-09 16:26:12,129 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 11:27:01] 2026-01-09 16:26:12,129 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 11:27:01] 2026-01-09 16:26:12,129 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 11:27:01] 2026-01-09 16:26:28,002 | INFO     | [monitor] cgroup control has ended
[2026-01-09 11:27:01] 2026-01-09 16:26:28,953 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139636891633472)>', '<ExcThread(monitor, started 139636517082880)>']
[2026-01-09 11:27:01] 2026-01-09 16:26:29,237 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 11:27:01] 2026-01-09 16:26:29,240 | INFO     | [monitor] control thread has ended
[2026-01-09 11:27:01] 2026-01-09 16:26:33,981 | INFO     | all workflow threads have been joined
[2026-01-09 11:27:01] 2026-01-09 16:26:33,981 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 11:27:01] 2026-01-09 16:26:33,981 | INFO     | traces error code: 0
[2026-01-09 11:27:01] 2026-01-09 16:26:33,981 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 11:27:01] 2026-01-09 16:26:34,164 [wrapper] ==== pilot stdout END ====
[2026-01-09 11:27:01] 2026-01-09 16:26:34,191 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 11:27:01] 2026-01-09 16:26:34,214 [wrapper] pilotpid: 1191361
[2026-01-09 11:27:01] 2026-01-09 16:26:34,246 [wrapper] Pilot exit status: 0
[2026-01-09 11:27:01] 2026-01-09 16:26:34,257 [wrapper] pandaids: 6963161870
[2026-01-09 11:27:01] 2026-01-09 16:26:34,354 [wrapper] cleanup supervisor_pilot 1948822 1191363
[2026-01-09 11:27:01] 2026-01-09 16:26:34,357 [wrapper] Test setup, not cleaning
[2026-01-09 11:27:01] 2026-01-09 16:26:34,385 [wrapper] apfmon messages muted
[2026-01-09 11:27:01] 2026-01-09 16:26:34,395 [wrapper] ==== wrapper stdout END ====
[2026-01-09 11:27:01] 2026-01-09 16:26:34,433 [wrapper] ==== wrapper stderr END ====
[2026-01-09 11:27:01]  *** Error codes and diagnostics ***
[2026-01-09 11:27:01]     "exeErrorCode": 0,
[2026-01-09 11:27:01]     "exeErrorDiag": "",
[2026-01-09 11:27:01]     "pilotErrorCode": 0,
[2026-01-09 11:27:01]     "pilotErrorDiag": "",
[2026-01-09 11:27:01]  *** Listing of results directory ***
[2026-01-09 11:27:01] total 440948
[2026-01-09 11:27:01] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 16:44 pilot3.tar.gz
[2026-01-09 11:27:01] -rwx------. 1 boincer umatlas     36322 Jan  8 16:49 runpilot2-wrapper.sh
[2026-01-09 11:27:01] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 16:51 queuedata.json
[2026-01-09 11:27:01] -rw-r--r--. 1 boincer umatlas       100 Jan  9 08:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 11:27:01] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 08:18 run_atlas
[2026-01-09 11:27:01] -rw-r--r--. 1 boincer umatlas       105 Jan  9 08:18 job.xml
[2026-01-09 11:27:01] -rw-r--r--. 2 boincer umatlas 226871783 Jan  9 08:18 EVNT.47898824._001230.pool.root.1
[2026-01-09 11:27:01] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 08:18 start_atlas.sh
[2026-01-09 11:27:01] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 08:18 shared
[2026-01-09 11:27:01] -rw-r--r--. 2 boincer umatlas    592398 Jan  9 08:18 input.tar.gz
[2026-01-09 11:27:01] -rw-r--r--. 1 boincer umatlas         0 Jan  9 08:18 boinc_lockfile
[2026-01-09 11:27:01] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 08:18 pandaJob.out
[2026-01-09 11:27:01] -rw-------. 1 boincer umatlas        57 Jan  9 08:18 setup.sh.local
[2026-01-09 11:27:01] -rw-------. 1 boincer umatlas    989377 Jan  9 08:19 agis_schedconf.cvmfs.json
[2026-01-09 11:27:01] drwx------. 5 boincer umatlas      4096 Jan  9 08:19 pilot3
[2026-01-09 11:27:01] -rw-r--r--. 1 boincer umatlas      6956 Jan  9 11:22 init_data.xml
[2026-01-09 11:27:01] -rw-------. 1 boincer umatlas 217025346 Jan  9 11:24 HITS.47898826._033527.pool.root.1
[2026-01-09 11:27:01] -rw-r--r--. 1 boincer umatlas       529 Jan  9 11:24 boinc_task_state.xml
[2026-01-09 11:27:01] -rw-------. 1 boincer umatlas      1037 Jan  9 11:25 memory_monitor_summary.json
[2026-01-09 11:27:01] -rw-------. 1 boincer umatlas   1516240 Jan  9 11:25 agis_ddmendpoints.agis.ALL.json
[2026-01-09 11:27:01] -rw-------. 1 boincer umatlas    403769 Jan  9 11:25 log.47898826._033527.job.log.tgz.1
[2026-01-09 11:27:01] -rw-------. 1 boincer umatlas        95 Jan  9 11:25 pilot_heartbeat.json
[2026-01-09 11:27:01] -rw-------. 1 boincer umatlas      7783 Jan  9 11:25 heartbeat.json
[2026-01-09 11:27:01] -rw-------. 1 boincer umatlas      4825 Jan  9 11:26 pilotlog.txt
[2026-01-09 11:27:01] -rw-------. 1 boincer umatlas   1455831 Jan  9 11:26 log.47898826._033527.job.log.1
[2026-01-09 11:27:01] -rw-------. 1 boincer umatlas       357 Jan  9 11:26 output.list
[2026-01-09 11:27:01] -rw-r--r--. 1 boincer umatlas       620 Jan  9 11:26 runtime_log
[2026-01-09 11:27:01] -rw-------. 1 boincer umatlas   1873920 Jan  9 11:26 result.tar.gz
[2026-01-09 11:27:01] -rw-r--r--. 1 boincer umatlas      9338 Jan  9 11:26 runtime_log.err
[2026-01-09 11:27:01] -rw-------. 1 boincer umatlas       653 Jan  9 11:26 CrJKDml3Cy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmPQgKDmwTWcmm.diag
[2026-01-09 11:27:01] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 11:27 boinc_mmap_file
[2026-01-09 11:27:01] -rw-r--r--. 1 boincer umatlas     21376 Jan  9 11:27 stderr.txt
[2026-01-09 11:27:01] -rw-r--r--. 1 boincer umatlas        27 Jan  9 11:27 wrapper_checkpoint.txt
[2026-01-09 11:27:01] HITS file was successfully produced:
[2026-01-09 11:27:01] -rw-------. 1 boincer umatlas 217025346 Jan  9 11:24 shared/HITS.pool.root.1
[2026-01-09 11:27:01]  *** Contents of shared directory: ***
[2026-01-09 11:27:01] total 435932
[2026-01-09 11:27:01] -rw-r--r--. 2 boincer umatlas 226871783 Jan  9 08:18 ATLAS.root_0
[2026-01-09 11:27:01] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 08:18 start_atlas.sh
[2026-01-09 11:27:01] -rw-r--r--. 2 boincer umatlas    592398 Jan  9 08:18 input.tar.gz
[2026-01-09 11:27:01] -rw-------. 1 boincer umatlas 217025346 Jan  9 11:24 HITS.pool.root.1
[2026-01-09 11:27:01] -rw-------. 1 boincer umatlas   1873920 Jan  9 11:26 result.tar.gz
11:27:03 (1182304): run_atlas exited; CPU time 46722.458573
11:27:03 (1182304): called boinc_finish(0)

</stderr_txt>
]]>

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