Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:51:43 (10345): wrapper (7.7.26015): starting
16:51:43 (10345): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 16:51:43] Arguments: --nthreads 8
[2026-01-09 16:51:43] Threads: 8
[2026-01-09 16:51:43] Checking for CVMFS
[2026-01-09 16:51:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 16:51:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 16:51:43] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 16:51:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 16:51:44] 2.11.2.0 2053 35609 97572 154948 2 57 24378080 25165825 0 130560 0 7374354 99.680 9387968 4139 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 16:51:44] CVMFS is ok
[2026-01-09 16:51:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 16:51:44] Checking for apptainer binary...
[2026-01-09 16:51:44] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 16:51:44] Running /usr/bin/apptainer --version
[2026-01-09 16:51:44] apptainer version 1.3.2-1.el7
[2026-01-09 16:51:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 16:51:45] cg-vwn436.simple-grid.lan
[2026-01-09 16:51:45] apptainer works
[2026-01-09 16:51:45] Set ATHENA_PROC_NUMBER=8
[2026-01-09 16:51:45] Set ATHENA_CORE_NUMBER=8
[2026-01-09 16:51:45] Starting ATLAS job with PandaID=6963161558
[2026-01-09 16:51:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 19:33:25]  *** The last 200 lines of the pilot log: ***
[2026-01-09 19:33:25] 2026-01-09 18:32:26,673 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 19:33:25] 2026-01-09 18:32:26,676 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6963161558/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 19:33:25] 2026-01-09 18:32:26,677 | INFO     | extracted standard info from prmon json
[2026-01-09 19:33:25] 2026-01-09 18:32:26,677 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 19:33:25] 2026-01-09 18:32:26,677 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 19:33:25] 2026-01-09 18:32:26,678 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 19:33:25] 2026-01-09 18:32:26,678 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 19:33:25] 2026-01-09 18:32:26,682 | INFO     | fitting pss+swap vs Time
[2026-01-09 19:33:25] 2026-01-09 18:32:26,682 | INFO     | sum of square deviations: 1199940638.0
[2026-01-09 19:33:25] 2026-01-09 18:32:26,684 | INFO     | sum of deviations: 9637449718.999996
[2026-01-09 19:33:25] 2026-01-09 18:32:26,684 | INFO     | mean x: 1767978715.0
[2026-01-09 19:33:25] 2026-01-09 18:32:26,684 | INFO     | mean y: 2502128.7070063693
[2026-01-09 19:33:25] 2026-01-09 18:32:26,684 | INFO     | intersect: -14197205282.214705
[2026-01-09 19:33:25] 2026-01-09 18:32:26,685 | INFO     | chi2: 1.5980673376303243
[2026-01-09 19:33:25] 2026-01-09 18:32:26,685 | INFO     | sum of square deviations: 1088905998.0
[2026-01-09 19:33:25] 2026-01-09 18:32:26,686 | INFO     | sum of deviations: 9339861859.5
[2026-01-09 19:33:25] 2026-01-09 18:32:26,686 | INFO     | mean x: 1767978562.5
[2026-01-09 19:33:25] 2026-01-09 18:32:26,686 | INFO     | mean y: 2501719.9013157897
[2026-01-09 19:33:25] 2026-01-09 18:32:26,687 | INFO     | intersect: -15161962039.721933
[2026-01-09 19:33:25] 2026-01-09 18:32:26,687 | INFO     | chi2: 1.5995739456422722
[2026-01-09 19:33:25] 2026-01-09 18:32:26,687 | INFO     | current chi2=1.5995739456422722 (change=-0.0942768791071072 %)
[2026-01-09 19:33:25] 2026-01-09 18:32:26,688 | INFO     | right removable region: 151
[2026-01-09 19:33:25] 2026-01-09 18:32:26,688 | INFO     | sum of square deviations: 1088905998.0
[2026-01-09 19:33:25] 2026-01-09 18:32:26,689 | INFO     | sum of deviations: -14152785313.999998
[2026-01-09 19:33:25] 2026-01-09 18:32:26,689 | INFO     | mean x: 1767978867.5
[2026-01-09 19:33:25] 2026-01-09 18:32:26,689 | INFO     | mean y: 2534318.5921052634
[2026-01-09 19:33:25] 2026-01-09 18:32:26,690 | INFO     | intersect: 22981400627.873238
[2026-01-09 19:33:25] 2026-01-09 18:32:26,690 | INFO     | chi2: 0.11087497721877079
[2026-01-09 19:33:25] 2026-01-09 18:32:26,690 | INFO     | current chi2=0.11087497721877079 (change=93.06193333610207 %)
[2026-01-09 19:33:25] 2026-01-09 18:32:26,691 | INFO     | sum of square deviations: 984941258.0
[2026-01-09 19:33:25] 2026-01-09 18:32:26,691 | INFO     | sufficient remaining disk space (497971888128 B)
[2026-01-09 19:33:25] 2026-01-09 18:32:26,692 | INFO     | sum of deviations: -11287956975.0
[2026-01-09 19:33:25] 2026-01-09 18:32:26,693 | INFO     | mean x: 1767979020.0
[2026-01-09 19:33:25] 2026-01-09 18:32:26,693 | INFO     | mean y: 2530054.4353741496
[2026-01-09 19:33:25] 2026-01-09 18:32:26,693 | INFO     | intersect: 20264521262.91277
[2026-01-09 19:33:25] 2026-01-09 18:32:26,694 | INFO     | chi2: 0.09610177469104277
[2026-01-09 19:33:25] 2026-01-09 18:32:26,694 | INFO     | work directory size check will use 4404019200 B as a max limit (20% grace limit added, divider=1)
[2026-01-09 19:33:25] 2026-01-09 18:32:26,694 | INFO     | current chi2=0.09610177469104277 (change=13.324198929555198 %)
[2026-01-09 19:33:25] 2026-01-09 18:32:26,694 | INFO     | left removable region: 20
[2026-01-09 19:33:25] 2026-01-09 18:32:26,695 | INFO     | sum of square deviations: 697054930.0
[2026-01-09 19:33:25] 2026-01-09 18:32:26,696 | INFO     | sum of deviations: -729894829.0000002
[2026-01-09 19:33:25] 2026-01-09 18:32:26,696 | INFO     | mean x: 1767979142.0
[2026-01-09 19:33:25] 2026-01-09 18:32:26,696 | INFO     | mean y: 2512668.381679389
[2026-01-09 19:33:25] 2026-01-09 18:32:26,696 | INFO     | intersect: 1853785470.5490167
[2026-01-09 19:33:25] 2026-01-09 18:32:26,697 | INFO     | chi2: 0.024847986145712382
[2026-01-09 19:33:25] 2026-01-09 18:32:26,697 | INFO     | current memory leak: -1.05 B/s (using 131 data points, chi2=0.02)
[2026-01-09 19:33:25] 2026-01-09 18:32:26,698 | INFO     | could have reported an average CPU frequency of 1999 MHz (8 samples)
[2026-01-09 19:33:25] 2026-01-09 18:32:26,698 | INFO     | ..............................
[2026-01-09 19:33:25] 2026-01-09 18:32:26,699 | INFO     | . Timing measurements:
[2026-01-09 19:33:25] 2026-01-09 18:32:26,699 | INFO     | . get job = 0 s
[2026-01-09 19:33:25] 2026-01-09 18:32:26,699 | INFO     | . initial setup = 2 s
[2026-01-09 19:33:25] 2026-01-09 18:32:26,699 | INFO     | . payload setup = 8 s
[2026-01-09 19:33:25] 2026-01-09 18:32:26,699 | INFO     | . stage-in = 0 s
[2026-01-09 19:33:25] 2026-01-09 18:32:26,699 | INFO     | . payload execution = 9582 s
[2026-01-09 19:33:25] 2026-01-09 18:32:26,700 | INFO     | . stage-out = 1 s
[2026-01-09 19:33:25] 2026-01-09 18:32:26,700 | INFO     | . log creation = 0 s
[2026-01-09 19:33:25] 2026-01-09 18:32:26,700 | INFO     | ..............................
[2026-01-09 19:33:25] 2026-01-09 18:32:26,759 | INFO     | size of work directory /var/lib/boinc/slots/8/PanDA_Pilot-6963161558: 3987032 B (within 4404019200 B limit)
[2026-01-09 19:33:25] 2026-01-09 18:32:26,765 | INFO     | pfn file=/var/lib/boinc/slots/8/PanDA_Pilot-6963161558/HITS.47898826._033220.pool.root.1 does not exist (skip from workdir size calculation)
[2026-01-09 19:33:25] 2026-01-09 18:32:26,765 | INFO     | total size of present files: 0 B (workdir size: 3987032 B)
[2026-01-09 19:33:25] 2026-01-09 18:32:26,765 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/8/PanDA_Pilot-6963161558/HITS.47898826._033220.pool.root.1 since it does not exist
[2026-01-09 19:33:25] 2026-01-09 18:32:26,887 | INFO     | number of running child processes to parent process 20509: 1
[2026-01-09 19:33:25] 2026-01-09 18:32:26,887 | INFO     | maximum number of monitored processes: 6
[2026-01-09 19:33:25] 2026-01-09 18:32:26,888 | INFO     | aborting job monitoring since job object (job id=6963161558) has expired
[2026-01-09 19:33:25] 2026-01-09 18:32:27,009 | INFO     | 
[2026-01-09 19:33:25] 2026-01-09 18:32:27,009 | INFO     | job summary report
[2026-01-09 19:33:25] 2026-01-09 18:32:27,009 | INFO     | --------------------------------------------------
[2026-01-09 19:33:25] 2026-01-09 18:32:27,009 | INFO     | PanDA job id: 6963161558
[2026-01-09 19:33:25] 2026-01-09 18:32:27,009 | INFO     | task id: 47898826
[2026-01-09 19:33:25] 2026-01-09 18:32:27,010 | INFO     | errors: (none)
[2026-01-09 19:33:25] 2026-01-09 18:32:27,010 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 19:33:25] 2026-01-09 18:32:27,010 | INFO     | pilot state: finished 
[2026-01-09 19:33:25] 2026-01-09 18:32:27,010 | INFO     | transexitcode: 0
[2026-01-09 19:33:25] 2026-01-09 18:32:27,010 | INFO     | exeerrorcode: 0
[2026-01-09 19:33:25] 2026-01-09 18:32:27,010 | INFO     | exeerrordiag: 
[2026-01-09 19:33:25] 2026-01-09 18:32:27,010 | INFO     | exitcode: 0
[2026-01-09 19:33:25] 2026-01-09 18:32:27,010 | INFO     | exitmsg: OK
[2026-01-09 19:33:25] 2026-01-09 18:32:27,010 | INFO     | cpuconsumptiontime: 73367 s
[2026-01-09 19:33:25] 2026-01-09 18:32:27,010 | INFO     | nevents: 400
[2026-01-09 19:33:25] 2026-01-09 18:32:27,011 | INFO     | neventsw: 0
[2026-01-09 19:33:25] 2026-01-09 18:32:27,011 | INFO     | pid: 20509
[2026-01-09 19:33:25] 2026-01-09 18:32:27,011 | INFO     | pgrp: 20509
[2026-01-09 19:33:25] 2026-01-09 18:32:27,011 | INFO     | corecount: 8
[2026-01-09 19:33:25] 2026-01-09 18:32:27,011 | INFO     | event service: False
[2026-01-09 19:33:25] 2026-01-09 18:32:27,011 | INFO     | sizes: {0: 2283971, 1: 2283971, 7: 2284261, 12: 2284289, 9594: 2312468, 9595: 2321466, 9597: 2321650, 9607: 2321872}
[2026-01-09 19:33:25] 2026-01-09 18:32:27,011 | INFO     | --------------------------------------------------
[2026-01-09 19:33:25] 2026-01-09 18:32:27,011 | INFO     | 
[2026-01-09 19:33:25] 2026-01-09 18:32:27,011 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-01-09 19:33:25] 2026-01-09 18:32:27,105 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 19:33:25] 2026-01-09 18:32:27,105 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 19:33:25] 2026-01-09 18:32:27,106 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 19:33:25] 2026-01-09 18:32:27,106 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 19:33:25] 2026-01-09 18:32:27,106 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 19:33:25] 2026-01-09 18:32:27,106 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 19:33:25] 2026-01-09 18:32:27,106 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 19:33:25] 2026-01-09 18:32:27,106 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 19:33:25] 2026-01-09 18:32:27,106 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 19:33:25] 2026-01-09 18:32:27,106 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 19:33:25] 2026-01-09 18:32:27,107 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 19:33:25] 2026-01-09 18:32:27,107 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 19:33:25] 2026-01-09 18:32:27,107 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 19:33:25] 2026-01-09 18:32:27,107 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 19:33:25] 2026-01-09 18:32:27,107 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 19:33:25] 2026-01-09 18:32:27,107 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 19:33:25] 2026-01-09 18:32:27,107 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 19:33:25] 2026-01-09 18:32:27,107 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 19:33:25] 2026-01-09 18:32:27,107 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 19:33:25] 2026-01-09 18:32:27,108 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 19:33:25] 2026-01-09 18:32:27,108 | INFO     | job 6963161558 has completed (purged errors)
[2026-01-09 19:33:25] 2026-01-09 18:32:27,108 | INFO     | overall cleanup function is called
[2026-01-09 19:33:25] 2026-01-09 18:32:28,117 | INFO     | --- collectZombieJob: --- 10, [20509]
[2026-01-09 19:33:25] 2026-01-09 18:32:28,117 | INFO     | zombie collector waiting for pid 20509
[2026-01-09 19:33:25] 2026-01-09 18:32:28,117 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 19:33:25] 2026-01-09 18:32:28,117 | INFO     | collected zombie processes
[2026-01-09 19:33:25] 2026-01-09 18:32:28,117 | INFO     | will attempt to kill all subprocesses of pid=20509
[2026-01-09 19:33:25] 2026-01-09 18:32:28,183 | INFO     | process IDs to be killed: [20509] (in reverse order)
[2026-01-09 19:33:25] 2026-01-09 18:32:28,239 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 19:33:25] 2026-01-09 18:32:28,239 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 19:33:25] 2026-01-09 18:32:28,241 | INFO     | did not find any defunct processes belonging to 20509
[2026-01-09 19:33:25] 2026-01-09 18:32:28,245 | INFO     | did not find any defunct processes belonging to 20509
[2026-01-09 19:33:25] 2026-01-09 18:32:28,245 | INFO     | ready for new job
[2026-01-09 19:33:25] 2026-01-09 18:32:28,246 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 19:33:25] 2026-01-09 18:32:28,247 | INFO     | ***************************************
[2026-01-09 19:33:25] 2026-01-09 18:32:28,248 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 19:33:25] 2026-01-09 18:32:28,248 | INFO     | ***************************************
[2026-01-09 19:33:25] 2026-01-09 18:32:28,248 | INFO     | 
[2026-01-09 19:33:25] 2026-01-09 18:32:28,248 | INFO     | pilot is running in a VM
[2026-01-09 19:33:25] 2026-01-09 18:32:28,249 | INFO     | architecture information:
[2026-01-09 19:33:25] 2026-01-09 18:32:28,249 | INFO     | executing command: cat /etc/os-release
[2026-01-09 19:33:25] 2026-01-09 18:32:28,271 | INFO     | cat /etc/os-release:
[2026-01-09 19:33:25] NAME="CentOS Linux"
[2026-01-09 19:33:25] VERSION="7 (Core)"
[2026-01-09 19:33:25] ID="centos"
[2026-01-09 19:33:25] ID_LIKE="rhel fedora"
[2026-01-09 19:33:25] VERSION_ID="7"
[2026-01-09 19:33:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 19:33:25] ANSI_COLOR="0;31"
[2026-01-09 19:33:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 19:33:25] HOME_URL="https://www.centos.org/"
[2026-01-09 19:33:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 19:33:25] 
[2026-01-09 19:33:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 19:33:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 19:33:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 19:33:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 19:33:25] 
[2026-01-09 19:33:25] 2026-01-09 18:32:28,271 | INFO     | ***************************************
[2026-01-09 19:33:25] 2026-01-09 18:32:28,774 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-01-09 19:33:25] 2026-01-09 18:32:28,842 | INFO     | sufficient remaining disk space (497977131008 B)
[2026-01-09 19:33:25] 2026-01-09 18:32:28,842 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 19:33:25] 2026-01-09 18:32:28,843 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 19:33:25] 2026-01-09 18:32:28,843 | INFO     | update_server=False
[2026-01-09 19:33:25] 2026-01-09 18:32:28,843 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 19:33:25] 2026-01-09 18:32:28,843 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 19:33:25] 2026-01-09 18:32:28,843 | INFO     | aborting loop
[2026-01-09 19:33:25] 2026-01-09 18:32:28,844 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 19:33:25] 2026-01-09 18:32:29,187 | INFO     | all data control threads have been joined
[2026-01-09 19:33:25] 2026-01-09 18:32:29,848 | INFO     | [job] retrieve thread has finished
[2026-01-09 19:33:25] 2026-01-09 18:32:29,849 | INFO     | [job] job monitor thread has finished
[2026-01-09 19:33:25] 2026-01-09 18:32:29,964 | INFO     | all job control threads have been joined
[2026-01-09 19:33:25] 2026-01-09 18:32:30,112 | INFO     | all payload control threads have been joined
[2026-01-09 19:33:25] 2026-01-09 18:32:30,133 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 19:33:25] 2026-01-09 18:32:30,192 | INFO     | [data] control thread has finished
[2026-01-09 19:33:25] 2026-01-09 18:32:30,809 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 19:33:25] 2026-01-09 18:32:30,850 | INFO     | [data] copytool_out thread has finished
[2026-01-09 19:33:25] 2026-01-09 18:32:30,962 | INFO     | [payload] failed_post thread has finished
[2026-01-09 19:33:25] 2026-01-09 18:32:30,968 | INFO     | [job] control thread has finished
[2026-01-09 19:33:25] 2026-01-09 18:32:31,118 | INFO     | [payload] control thread has finished
[2026-01-09 19:33:25] 2026-01-09 18:32:31,126 | INFO     | [job] validate thread has finished
[2026-01-09 19:33:25] 2026-01-09 18:32:31,178 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 19:33:25] 2026-01-09 18:32:31,183 | INFO     | [data] copytool_in thread has finished
[2026-01-09 19:33:25] 2026-01-09 18:32:31,291 | INFO     | [payload] validate_post thread has finished
[2026-01-09 19:33:25] 2026-01-09 18:32:31,836 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 19:33:25] 2026-01-09 18:32:31,880 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 19:33:25] 2026-01-09 18:32:32,842 | INFO     | [job] queue monitor thread has finished
[2026-01-09 19:33:25] 2026-01-09 18:32:35,886 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 19:33:25] 2026-01-09 18:32:39,123 | INFO     | job.realtimelogging is not enabled
[2026-01-09 19:33:25] 2026-01-09 18:32:40,129 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 19:33:25] 2026-01-09 18:32:59,514 | INFO     | PID=14066 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 19:33:25] 2026-01-09 18:32:59,515 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 19:33:25] 2026-01-09 18:32:59,515 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 19:33:25] 2026-01-09 18:32:59,515 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 19:33:25] 2026-01-09 18:33:18,449 | INFO     | [monitor] cgroup control has ended
[2026-01-09 19:33:25] 2026-01-09 18:33:20,100 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139792981858112)>', '<ExcThread(monitor, started 139792310327040)>']
[2026-01-09 19:33:25] 2026-01-09 18:33:20,624 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 19:33:25] 2026-01-09 18:33:20,624 | INFO     | [monitor] control thread has ended
[2026-01-09 19:33:25] 2026-01-09 18:33:25,124 | INFO     | all workflow threads have been joined
[2026-01-09 19:33:25] 2026-01-09 18:33:25,124 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 19:33:25] 2026-01-09 18:33:25,124 | INFO     | traces error code: 0
[2026-01-09 19:33:25] 2026-01-09 18:33:25,125 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 19:33:25] 2026-01-09 18:33:25,291 [wrapper] ==== pilot stdout END ====
[2026-01-09 19:33:25] 2026-01-09 18:33:25,308 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 19:33:25] 2026-01-09 18:33:25,319 [wrapper] pilotpid: 14066
[2026-01-09 19:33:25] 2026-01-09 18:33:25,324 [wrapper] Pilot exit status: 0
[2026-01-09 19:33:25] 2026-01-09 18:33:25,355 [wrapper] pandaids: 6963161558
[2026-01-09 19:33:25] 2026-01-09 18:33:25,414 [wrapper] cleanup supervisor_pilot  4914 14067
[2026-01-09 19:33:25] 2026-01-09 18:33:25,420 [wrapper] Test setup, not cleaning
[2026-01-09 19:33:25] 2026-01-09 18:33:25,428 [wrapper] apfmon messages muted
[2026-01-09 19:33:25] 2026-01-09 18:33:25,438 [wrapper] ==== wrapper stdout END ====
[2026-01-09 19:33:25] 2026-01-09 18:33:25,442 [wrapper] ==== wrapper stderr END ====
[2026-01-09 19:33:25]  *** Error codes and diagnostics ***
[2026-01-09 19:33:25]     "exeErrorCode": 0,
[2026-01-09 19:33:25]     "exeErrorDiag": "",
[2026-01-09 19:33:25]     "pilotErrorCode": 0,
[2026-01-09 19:33:25]     "pilotErrorDiag": "",
[2026-01-09 19:33:25]  *** Listing of results directory ***
[2026-01-09 19:33:25] total 441408
[2026-01-09 19:33:25] -rw-r--r--. 1 boinc boinc    579449 Jan  8 22:44 pilot3.tar.gz
[2026-01-09 19:33:25] -rwx------. 1 boinc boinc     36322 Jan  8 22:49 runpilot2-wrapper.sh
[2026-01-09 19:33:25] -rw-r--r--. 1 boinc boinc      5112 Jan  8 22:51 queuedata.json
[2026-01-09 19:33:25] -rw-r--r--. 1 boinc boinc       100 Jan  9 16:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 19:33:25] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 16:51 run_atlas
[2026-01-09 19:33:25] -rw-r--r--. 1 boinc boinc       105 Jan  9 16:51 job.xml
[2026-01-09 19:33:25] -rw-r--r--. 1 boinc boinc      6388 Jan  9 16:51 init_data.xml
[2026-01-09 19:33:25] -rw-r--r--. 2 boinc boinc 223832693 Jan  9 16:51 EVNT.47898824._001284.pool.root.1
[2026-01-09 19:33:25] -rw-r--r--. 2 boinc boinc     15847 Jan  9 16:51 start_atlas.sh
[2026-01-09 19:33:25] drwxrwx--x. 2 boinc boinc        68 Jan  9 16:51 shared
[2026-01-09 19:33:25] -rw-r--r--. 2 boinc boinc    592395 Jan  9 16:51 input.tar.gz
[2026-01-09 19:33:25] -rw-r--r--. 1 boinc boinc         0 Jan  9 16:51 boinc_lockfile
[2026-01-09 19:33:25] -rw-r--r--. 1 boinc boinc      2520 Jan  9 16:51 pandaJob.out
[2026-01-09 19:33:25] -rw-------. 1 boinc boinc    989377 Jan  9 16:52 agis_schedconf.cvmfs.json
[2026-01-09 19:33:25] -rw-------. 1 boinc boinc   1516240 Jan  9 16:52 agis_ddmendpoints.agis.ALL.json
[2026-01-09 19:33:25] drwx------. 5 boinc boinc      4096 Jan  9 16:52 pilot3
[2026-01-09 19:33:25] -rw-r--r--. 1 boinc boinc       530 Jan  9 19:31 boinc_task_state.xml
[2026-01-09 19:33:25] -rw-------. 1 boinc boinc 220885415 Jan  9 19:31 HITS.47898826._033220.pool.root.1
[2026-01-09 19:33:25] -rw-------. 1 boinc boinc        95 Jan  9 19:32 pilot_heartbeat.json
[2026-01-09 19:33:25] -rw-------. 1 boinc boinc      1009 Jan  9 19:32 memory_monitor_summary.json
[2026-01-09 19:33:25] -rw-------. 1 boinc boinc    402060 Jan  9 19:32 log.47898826._033220.job.log.tgz.1
[2026-01-09 19:33:25] -rw-------. 1 boinc boinc      7763 Jan  9 19:32 heartbeat.json
[2026-01-09 19:33:25] -rw-r--r--. 1 boinc boinc      8192 Jan  9 19:33 boinc_mmap_file
[2026-01-09 19:33:25] -rw-r--r--. 1 boinc boinc        27 Jan  9 19:33 wrapper_checkpoint.txt
[2026-01-09 19:33:25] -rw-------. 1 boinc boinc      4881 Jan  9 19:33 pilotlog.txt
[2026-01-09 19:33:25] -rw-------. 1 boinc boinc   1289526 Jan  9 19:33 log.47898826._033220.job.log.1
[2026-01-09 19:33:25] -rw-------. 1 boinc boinc       357 Jan  9 19:33 output.list
[2026-01-09 19:33:25] -rw-r--r--. 1 boinc boinc       620 Jan  9 19:33 runtime_log
[2026-01-09 19:33:25] -rw-------. 1 boinc boinc   1710080 Jan  9 19:33 result.tar.gz
[2026-01-09 19:33:25] -rw-------. 1 boinc boinc       652 Jan  9 19:33 T49LDmY3Cy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmVPgKDmFI8byn.diag
[2026-01-09 19:33:25] -rw-r--r--. 1 boinc boinc      8816 Jan  9 19:33 runtime_log.err
[2026-01-09 19:33:25] -rw-r--r--. 1 boinc boinc     21165 Jan  9 19:33 stderr.txt
[2026-01-09 19:33:25] HITS file was successfully produced:
[2026-01-09 19:33:25] -rw-------. 1 boinc boinc 220885415 Jan  9 19:31 shared/HITS.pool.root.1
[2026-01-09 19:33:25]  *** Contents of shared directory: ***
[2026-01-09 19:33:25] total 436568
[2026-01-09 19:33:25] -rw-r--r--. 2 boinc boinc 223832693 Jan  9 16:51 ATLAS.root_0
[2026-01-09 19:33:25] -rw-r--r--. 2 boinc boinc     15847 Jan  9 16:51 start_atlas.sh
[2026-01-09 19:33:25] -rw-r--r--. 2 boinc boinc    592395 Jan  9 16:51 input.tar.gz
[2026-01-09 19:33:25] -rw-------. 1 boinc boinc 220885415 Jan  9 19:31 HITS.pool.root.1
[2026-01-09 19:33:25] -rw-------. 1 boinc boinc   1710080 Jan  9 19:33 result.tar.gz
19:33:27 (10345): run_atlas exited; CPU time 73439.762128
19:33:27 (10345): called boinc_finish(0)

</stderr_txt>
]]>

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