Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:45:57 (28103): wrapper (7.7.26015): starting
08:45:57 (28103): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 08:45:57] Arguments: --nthreads 8
[2026-01-09 08:45:57] Threads: 8
[2026-01-09 08:45:57] Checking for CVMFS
[2026-01-09 08:45:58] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 08:45:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 08:45:58] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 08:45:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 08:45:58] 2.11.2.0 2866 136736 113352 154945 2 59 19280895 20275201 1 130560 0 37276511 99.812 9580894 24910 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 08:45:58] CVMFS is ok
[2026-01-09 08:45:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 08:45:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 08:45:58] Further information can be found at the LHC@home message board.
[2026-01-09 08:45:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 08:45:58] Checking for apptainer binary...
[2026-01-09 08:45:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 08:45:58] Running /usr/bin/apptainer --version
[2026-01-09 08:45:58] apptainer version 1.3.2-1.el7
[2026-01-09 08:45:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 08:46:00] c-204-35.aglt2.org
[2026-01-09 08:46:00] apptainer works
[2026-01-09 08:46:00] Set ATHENA_PROC_NUMBER=8
[2026-01-09 08:46:00] Set ATHENA_CORE_NUMBER=8
[2026-01-09 08:46:00] Starting ATLAS job with PandaID=6963162293
[2026-01-09 08:46:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 11:48:42]  *** The last 200 lines of the pilot log: ***
[2026-01-09 11:48:42] 2026-01-09 16:47:32,771 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 11:48:42] 2026-01-09 16:47:33,798 | INFO     | time since job start (10876s) is within the limit (349056.0s)
[2026-01-09 11:48:42] 2026-01-09 16:47:35,281 | INFO     | monitor loop #800: job 0:6963162293 is in state 'finished'
[2026-01-09 11:48:42] 2026-01-09 16:47:35,282 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 11:48:42] 2026-01-09 16:47:35,805 | INFO     | time since job start (10878s) is within the limit (349056.0s)
[2026-01-09 11:48:42] 2026-01-09 16:47:37,753 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 11:48:42] 2026-01-09 16:47:37,758 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2026-01-09 11:48:42] 2026-01-09 16:47:37,761 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963162293/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 11:48:42] 2026-01-09 16:47:37,762 | INFO     | extracted standard info from prmon json
[2026-01-09 11:48:42] 2026-01-09 16:47:37,763 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 11:48:42] 2026-01-09 16:47:37,763 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 11:48:42] 2026-01-09 16:47:37,763 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 11:48:42] 2026-01-09 16:47:37,763 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 11:48:42] 2026-01-09 16:47:37,767 | INFO     | fitting pss+swap vs Time
[2026-01-09 11:48:42] 2026-01-09 16:47:37,767 | INFO     | sum of square deviations: 1748737904.5
[2026-01-09 11:48:42] 2026-01-09 16:47:37,768 | INFO     | sum of deviations: 7820897321.499998
[2026-01-09 11:48:42] 2026-01-09 16:47:37,768 | INFO     | mean x: 1767971807.5
[2026-01-09 11:48:42] 2026-01-09 16:47:37,769 | INFO     | mean y: 2504388.5898876404
[2026-01-09 11:48:42] 2026-01-09 16:47:37,769 | INFO     | intersect: -7904412901.979004
[2026-01-09 11:48:42] 2026-01-09 16:47:37,769 | INFO     | chi2: 1.6537524510723054
[2026-01-09 11:48:42] 2026-01-09 16:47:37,769 | INFO     | sum of square deviations: 1605470102.0
[2026-01-09 11:48:42] 2026-01-09 16:47:37,770 | INFO     | sum of deviations: 7662704404.999998
[2026-01-09 11:48:42] 2026-01-09 16:47:37,771 | INFO     | mean x: 1767971655.0
[2026-01-09 11:48:42] 2026-01-09 16:47:37,778 | INFO     | mean y: 2504220.161849711
[2026-01-09 11:48:42] 2026-01-09 16:47:37,778 | INFO     | intersect: -8435799409.290378
[2026-01-09 11:48:42] 2026-01-09 16:47:37,779 | INFO     | chi2: 1.654786087222467
[2026-01-09 11:48:42] 2026-01-09 16:47:37,779 | INFO     | current chi2=1.654786087222467 (change=-0.06250247124297724 %)
[2026-01-09 11:48:42] 2026-01-09 16:47:37,779 | INFO     | right removable region: 172
[2026-01-09 11:48:42] 2026-01-09 16:47:37,779 | INFO     | sum of square deviations: 1605470102.0
[2026-01-09 11:48:42] 2026-01-09 16:47:37,780 | INFO     | sum of deviations: -19673398469.0
[2026-01-09 11:48:42] 2026-01-09 16:47:37,780 | INFO     | mean x: 1767971960.0
[2026-01-09 11:48:42] 2026-01-09 16:47:37,780 | INFO     | mean y: 2533289.225433526
[2026-01-09 11:48:42] 2026-01-09 16:47:37,781 | INFO     | intersect: 21667226270.906963
[2026-01-09 11:48:42] 2026-01-09 16:47:37,781 | INFO     | chi2: 0.1594567090812433
[2026-01-09 11:48:42] 2026-01-09 16:47:37,781 | INFO     | current chi2=0.1594567090812433 (change=90.35788524589333 %)
[2026-01-09 11:48:42] 2026-01-09 16:47:37,781 | INFO     | sum of square deviations: 1470248962.0
[2026-01-09 11:48:42] 2026-01-09 16:47:37,782 | INFO     | sum of deviations: -21286213825.0
[2026-01-09 11:48:42] 2026-01-09 16:47:37,782 | INFO     | mean x: 1767972112.5
[2026-01-09 11:48:42] 2026-01-09 16:47:37,782 | INFO     | mean y: 2535070.4285714286
[2026-01-09 11:48:42] 2026-01-09 16:47:37,783 | INFO     | intersect: 25599174412.46128
[2026-01-09 11:48:42] 2026-01-09 16:47:37,783 | INFO     | chi2: 0.13718493836887058
[2026-01-09 11:48:42] 2026-01-09 16:47:37,783 | INFO     | current chi2=0.13718493836887058 (change=13.967283559718538 %)
[2026-01-09 11:48:42] 2026-01-09 16:47:37,783 | INFO     | left removable region: 20
[2026-01-09 11:48:42] 2026-01-09 16:47:37,783 | INFO     | sum of square deviations: 1088905998.0
[2026-01-09 11:48:42] 2026-01-09 16:47:37,784 | INFO     | sum of deviations: -10391351036.999998
[2026-01-09 11:48:42] 2026-01-09 16:47:37,784 | INFO     | mean x: 1767972234.5
[2026-01-09 11:48:42] 2026-01-09 16:47:37,784 | INFO     | mean y: 2522450.5657894737
[2026-01-09 11:48:42] 2026-01-09 16:47:37,785 | INFO     | intersect: 16874153377.47963
[2026-01-09 11:48:42] 2026-01-09 16:47:37,785 | INFO     | chi2: 0.10144378358414063
[2026-01-09 11:48:42] 2026-01-09 16:47:37,785 | INFO     | current memory leak: -9.54 B/s (using 152 data points, chi2=0.10)
[2026-01-09 11:48:42] 2026-01-09 16:47:37,785 | INFO     | could have reported an average CPU frequency of 2017 MHz (9 samples)
[2026-01-09 11:48:42] 2026-01-09 16:47:37,786 | INFO     | ..............................
[2026-01-09 11:48:42] 2026-01-09 16:47:37,786 | INFO     | . Timing measurements:
[2026-01-09 11:48:42] 2026-01-09 16:47:37,786 | INFO     | . get job = 0 s
[2026-01-09 11:48:42] 2026-01-09 16:47:37,786 | INFO     | . initial setup = 2 s
[2026-01-09 11:48:42] 2026-01-09 16:47:37,786 | INFO     | . payload setup = 8 s
[2026-01-09 11:48:42] 2026-01-09 16:47:37,786 | INFO     | . stage-in = 0 s
[2026-01-09 11:48:42] 2026-01-09 16:47:37,786 | INFO     | . payload execution = 10839 s
[2026-01-09 11:48:42] 2026-01-09 16:47:37,786 | INFO     | . stage-out = 2 s
[2026-01-09 11:48:42] 2026-01-09 16:47:37,787 | INFO     | . log creation = 0 s
[2026-01-09 11:48:42] 2026-01-09 16:47:37,787 | INFO     | ..............................
[2026-01-09 11:48:42] 2026-01-09 16:47:37,787 | INFO     | monitor loop #801: job 0:6963162293 is in state 'finished'
[2026-01-09 11:48:42] 2026-01-09 16:47:37,791 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 11:48:42] 2026-01-09 16:47:37,817 | INFO     | time since job start (10880s) is within the limit (349056.0s)
[2026-01-09 11:48:42] 2026-01-09 16:47:38,378 | INFO     | 
[2026-01-09 11:48:42] 2026-01-09 16:47:38,378 | INFO     | job summary report
[2026-01-09 11:48:42] 2026-01-09 16:47:38,379 | INFO     | --------------------------------------------------
[2026-01-09 11:48:42] 2026-01-09 16:47:38,379 | INFO     | PanDA job id: 6963162293
[2026-01-09 11:48:42] 2026-01-09 16:47:38,379 | INFO     | task id: 47898826
[2026-01-09 11:48:42] 2026-01-09 16:47:38,379 | INFO     | errors: (none)
[2026-01-09 11:48:42] 2026-01-09 16:47:38,379 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 11:48:42] 2026-01-09 16:47:38,380 | INFO     | pilot state: finished 
[2026-01-09 11:48:42] 2026-01-09 16:47:38,380 | INFO     | transexitcode: 0
[2026-01-09 11:48:42] 2026-01-09 16:47:38,380 | INFO     | exeerrorcode: 0
[2026-01-09 11:48:42] 2026-01-09 16:47:38,380 | INFO     | exeerrordiag: 
[2026-01-09 11:48:42] 2026-01-09 16:47:38,380 | INFO     | exitcode: 0
[2026-01-09 11:48:42] 2026-01-09 16:47:38,380 | INFO     | exitmsg: OK
[2026-01-09 11:48:42] 2026-01-09 16:47:38,381 | INFO     | cpuconsumptiontime: 81211 s
[2026-01-09 11:48:42] 2026-01-09 16:47:38,381 | INFO     | nevents: 400
[2026-01-09 11:48:42] 2026-01-09 16:47:38,381 | INFO     | neventsw: 0
[2026-01-09 11:48:42] 2026-01-09 16:47:38,381 | INFO     | pid: 5956
[2026-01-09 11:48:42] 2026-01-09 16:47:38,381 | INFO     | pgrp: 5956
[2026-01-09 11:48:42] 2026-01-09 16:47:38,381 | INFO     | corecount: 8
[2026-01-09 11:48:42] 2026-01-09 16:47:38,381 | INFO     | event service: False
[2026-01-09 11:48:42] 2026-01-09 16:47:38,382 | INFO     | sizes: {0: 2283970, 1: 2283970, 6: 2284260, 11: 2284288, 10851: 2313344, 10854: 2322342, 10856: 2322526, 10863: 2322784}
[2026-01-09 11:48:42] 2026-01-09 16:47:38,382 | INFO     | --------------------------------------------------
[2026-01-09 11:48:42] 2026-01-09 16:47:38,382 | INFO     | 
[2026-01-09 11:48:42] 2026-01-09 16:47:38,382 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 11:48:42] 2026-01-09 16:47:38,410 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 11:48:42] 2026-01-09 16:47:38,411 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 11:48:42] 2026-01-09 16:47:38,411 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 11:48:42] 2026-01-09 16:47:38,411 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 11:48:42] 2026-01-09 16:47:38,411 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 11:48:42] 2026-01-09 16:47:38,411 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 11:48:42] 2026-01-09 16:47:38,412 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 11:48:42] 2026-01-09 16:47:38,412 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 11:48:42] 2026-01-09 16:47:38,412 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 11:48:42] 2026-01-09 16:47:38,412 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 11:48:42] 2026-01-09 16:47:38,412 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 11:48:42] 2026-01-09 16:47:38,412 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 11:48:42] 2026-01-09 16:47:38,413 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 11:48:42] 2026-01-09 16:47:38,413 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 11:48:42] 2026-01-09 16:47:38,413 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 11:48:42] 2026-01-09 16:47:38,413 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 11:48:42] 2026-01-09 16:47:38,413 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 11:48:42] 2026-01-09 16:47:38,414 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 11:48:42] 2026-01-09 16:47:38,414 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 11:48:42] 2026-01-09 16:47:38,414 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 11:48:42] 2026-01-09 16:47:38,414 | INFO     | job 6963162293 has completed (purged errors)
[2026-01-09 11:48:42] 2026-01-09 16:47:38,415 | INFO     | overall cleanup function is called
[2026-01-09 11:48:42] 2026-01-09 16:47:39,424 | INFO     | --- collectZombieJob: --- 10, [5956]
[2026-01-09 11:48:42] 2026-01-09 16:47:39,425 | INFO     | zombie collector waiting for pid 5956
[2026-01-09 11:48:42] 2026-01-09 16:47:39,425 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 11:48:42] 2026-01-09 16:47:39,425 | INFO     | collected zombie processes
[2026-01-09 11:48:42] 2026-01-09 16:47:39,426 | INFO     | will attempt to kill all subprocesses of pid=5956
[2026-01-09 11:48:42] 2026-01-09 16:47:39,520 | INFO     | process IDs to be killed: [5956] (in reverse order)
[2026-01-09 11:48:42] 2026-01-09 16:47:39,581 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 11:48:42] 2026-01-09 16:47:39,581 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 11:48:42] 2026-01-09 16:47:39,584 | INFO     | did not find any defunct processes belonging to 5956
[2026-01-09 11:48:42] 2026-01-09 16:47:39,587 | INFO     | did not find any defunct processes belonging to 5956
[2026-01-09 11:48:42] 2026-01-09 16:47:39,587 | INFO     | ready for new job
[2026-01-09 11:48:42] 2026-01-09 16:47:39,588 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 11:48:42] 2026-01-09 16:47:39,590 | INFO     | ***************************************
[2026-01-09 11:48:42] 2026-01-09 16:47:39,590 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 11:48:42] 2026-01-09 16:47:39,590 | INFO     | ***************************************
[2026-01-09 11:48:42] 2026-01-09 16:47:39,590 | INFO     | 
[2026-01-09 11:48:42] 2026-01-09 16:47:39,591 | INFO     | architecture information:
[2026-01-09 11:48:42] 2026-01-09 16:47:39,591 | INFO     | executing command: cat /etc/os-release
[2026-01-09 11:48:42] 2026-01-09 16:47:39,610 | INFO     | cat /etc/os-release:
[2026-01-09 11:48:42] NAME="CentOS Linux"
[2026-01-09 11:48:42] VERSION="7 (Core)"
[2026-01-09 11:48:42] ID="centos"
[2026-01-09 11:48:42] ID_LIKE="rhel fedora"
[2026-01-09 11:48:42] VERSION_ID="7"
[2026-01-09 11:48:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 11:48:42] ANSI_COLOR="0;31"
[2026-01-09 11:48:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 11:48:42] HOME_URL="https://www.centos.org/"
[2026-01-09 11:48:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 11:48:42] 
[2026-01-09 11:48:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 11:48:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 11:48:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 11:48:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 11:48:42] 
[2026-01-09 11:48:42] 2026-01-09 16:47:39,610 | INFO     | ***************************************
[2026-01-09 11:48:42] 2026-01-09 16:47:40,114 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 11:48:42] 2026-01-09 16:47:40,133 | INFO     | sufficient remaining disk space (18498977792 B)
[2026-01-09 11:48:42] 2026-01-09 16:47:40,133 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 11:48:42] 2026-01-09 16:47:40,134 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 11:48:42] 2026-01-09 16:47:40,134 | INFO     | update_server=False
[2026-01-09 11:48:42] 2026-01-09 16:47:40,134 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 11:48:42] 2026-01-09 16:47:40,135 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 11:48:42] 2026-01-09 16:47:40,294 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 11:48:42] 2026-01-09 16:47:40,295 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 11:48:42] 2026-01-09 16:47:40,295 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 11:48:42] 2026-01-09 16:47:40,296 | INFO     | will abort loop
[2026-01-09 11:48:42] 2026-01-09 16:47:40,456 | INFO     | all payload control threads have been joined
[2026-01-09 11:48:42] 2026-01-09 16:47:41,080 | INFO     | all data control threads have been joined
[2026-01-09 11:48:42] 2026-01-09 16:47:41,140 | INFO     | [job] retrieve thread has finished
[2026-01-09 11:48:42] 2026-01-09 16:47:41,168 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 11:48:42] 2026-01-09 16:47:41,190 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 11:48:42] 2026-01-09 16:47:41,301 | INFO     | [job] job monitor thread has finished
[2026-01-09 11:48:42] 2026-01-09 16:47:41,459 | INFO     | [payload] control thread has finished
[2026-01-09 11:48:42] 2026-01-09 16:47:41,535 | INFO     | [payload] validate_post thread has finished
[2026-01-09 11:48:42] 2026-01-09 16:47:41,560 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 11:48:42] 2026-01-09 16:47:41,653 | INFO     | [payload] failed_post thread has finished
[2026-01-09 11:48:42] 2026-01-09 16:47:41,755 | INFO     | all job control threads have been joined
[2026-01-09 11:48:42] 2026-01-09 16:47:42,041 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 11:48:42] 2026-01-09 16:47:42,085 | INFO     | [data] control thread has finished
[2026-01-09 11:48:42] 2026-01-09 16:47:42,139 | INFO     | [data] copytool_out thread has finished
[2026-01-09 11:48:42] 2026-01-09 16:47:42,349 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 11:48:42] 2026-01-09 16:47:42,365 | INFO     | [data] copytool_in thread has finished
[2026-01-09 11:48:42] 2026-01-09 16:47:42,368 | INFO     | [job] validate thread has finished
[2026-01-09 11:48:42] 2026-01-09 16:47:42,760 | INFO     | [job] control thread has finished
[2026-01-09 11:48:42] 2026-01-09 16:47:42,902 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 11:48:42] 2026-01-09 16:47:43,908 | INFO     | [job] queue monitor thread has finished
[2026-01-09 11:48:42] 2026-01-09 16:47:45,171 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 11:48:42] 2026-01-09 16:48:11,038 | INFO     | PID=31824 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 11:48:42] 2026-01-09 16:48:11,039 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 11:48:42] 2026-01-09 16:48:11,039 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 11:48:42] 2026-01-09 16:48:11,039 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 11:48:42] 2026-01-09 16:48:34,838 | INFO     | [monitor] cgroup control has ended
[2026-01-09 11:48:42] 2026-01-09 16:48:36,885 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140223335409472)>', '<ExcThread(monitor, started 140222092277504)>']
[2026-01-09 11:48:42] 2026-01-09 16:48:37,164 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 11:48:42] 2026-01-09 16:48:37,165 | INFO     | [monitor] control thread has ended
[2026-01-09 11:48:42] 2026-01-09 16:48:41,889 | INFO     | all workflow threads have been joined
[2026-01-09 11:48:42] 2026-01-09 16:48:41,890 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 11:48:42] 2026-01-09 16:48:41,890 | INFO     | traces error code: 0
[2026-01-09 11:48:42] 2026-01-09 16:48:41,891 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 11:48:42] 2026-01-09 16:48:42,014 [wrapper] ==== pilot stdout END ====
[2026-01-09 11:48:42] 2026-01-09 16:48:42,019 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 11:48:42] 2026-01-09 16:48:42,023 [wrapper] pilotpid: 31824
[2026-01-09 11:48:42] 2026-01-09 16:48:42,027 [wrapper] Pilot exit status: 0
[2026-01-09 11:48:42] 2026-01-09 16:48:42,043 [wrapper] pandaids: 6963162293
[2026-01-09 11:48:42] 2026-01-09 16:48:42,096 [wrapper] cleanup supervisor_pilot 25344 31825
[2026-01-09 11:48:42] 2026-01-09 16:48:42,101 [wrapper] Test setup, not cleaning
[2026-01-09 11:48:42] 2026-01-09 16:48:42,107 [wrapper] apfmon messages muted
[2026-01-09 11:48:42] 2026-01-09 16:48:42,112 [wrapper] ==== wrapper stdout END ====
[2026-01-09 11:48:42] 2026-01-09 16:48:42,116 [wrapper] ==== wrapper stderr END ====
[2026-01-09 11:48:42]  *** Error codes and diagnostics ***
[2026-01-09 11:48:42]     "exeErrorCode": 0,
[2026-01-09 11:48:42]     "exeErrorDiag": "",
[2026-01-09 11:48:42]     "pilotErrorCode": 0,
[2026-01-09 11:48:42]     "pilotErrorDiag": "",
[2026-01-09 11:48:42]  *** Listing of results directory ***
[2026-01-09 11:48:42] total 441640
[2026-01-09 11:48:42] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 16:44 pilot3.tar.gz
[2026-01-09 11:48:42] -rwx------ 1 boincer umatlas     36322 Jan  8 16:49 runpilot2-wrapper.sh
[2026-01-09 11:48:42] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 16:51 queuedata.json
[2026-01-09 11:48:42] -rw-r--r-- 1 boincer umatlas       100 Jan  9 08:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 11:48:42] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 08:45 run_atlas
[2026-01-09 11:48:42] -rw-r--r-- 1 boincer umatlas       105 Jan  9 08:45 job.xml
[2026-01-09 11:48:42] -rw-r--r-- 2 boincer umatlas 223941885 Jan  9 08:45 EVNT.47898824._001292.pool.root.1
[2026-01-09 11:48:42] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 08:45 start_atlas.sh
[2026-01-09 11:48:42] drwxrwx--x 2 boincer umatlas      4096 Jan  9 08:45 shared
[2026-01-09 11:48:42] -rw-r--r-- 2 boincer umatlas    592398 Jan  9 08:45 input.tar.gz
[2026-01-09 11:48:42] -rw-r--r-- 1 boincer umatlas         0 Jan  9 08:45 boinc_lockfile
[2026-01-09 11:48:42] -rw-r--r-- 1 boincer umatlas      2519 Jan  9 08:46 pandaJob.out
[2026-01-09 11:48:42] -rw------- 1 boincer umatlas        57 Jan  9 08:46 setup.sh.local
[2026-01-09 11:48:42] -rw------- 1 boincer umatlas    989377 Jan  9 08:46 agis_schedconf.cvmfs.json
[2026-01-09 11:48:42] drwx------ 5 boincer umatlas      4096 Jan  9 08:46 pilot3
[2026-01-09 11:48:42] -rw------- 1 boincer umatlas 220532031 Jan  9 11:46 HITS.47898826._033914.pool.root.1
[2026-01-09 11:48:42] -rw-r--r-- 1 boincer umatlas       530 Jan  9 11:47 boinc_task_state.xml
[2026-01-09 11:48:42] -rw------- 1 boincer umatlas      1048 Jan  9 11:47 memory_monitor_summary.json
[2026-01-09 11:48:42] -rw------- 1 boincer umatlas   1516240 Jan  9 11:47 agis_ddmendpoints.agis.ALL.json
[2026-01-09 11:48:42] -rw------- 1 boincer umatlas    418963 Jan  9 11:47 log.47898826._033914.job.log.tgz.1
[2026-01-09 11:48:42] -rw------- 1 boincer umatlas      7847 Jan  9 11:47 heartbeat.json
[2026-01-09 11:48:42] -rw------- 1 boincer umatlas        95 Jan  9 11:48 pilot_heartbeat.json
[2026-01-09 11:48:42] -rw-r--r-- 1 boincer umatlas      5911 Jan  9 11:48 init_data.xml
[2026-01-09 11:48:42] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 11:48 boinc_mmap_file
[2026-01-09 11:48:42] -rw-r--r-- 1 boincer umatlas        28 Jan  9 11:48 wrapper_checkpoint.txt
[2026-01-09 11:48:42] -rw------- 1 boincer umatlas      4932 Jan  9 11:48 pilotlog.txt
[2026-01-09 11:48:42] -rw------- 1 boincer umatlas   1504643 Jan  9 11:48 log.47898826._033914.job.log.1
[2026-01-09 11:48:42] -rw------- 1 boincer umatlas       357 Jan  9 11:48 output.list
[2026-01-09 11:48:42] -rw-r--r-- 1 boincer umatlas       620 Jan  9 11:48 runtime_log
[2026-01-09 11:48:42] -rw------- 1 boincer umatlas   1945600 Jan  9 11:48 result.tar.gz
[2026-01-09 11:48:42] -rw-r--r-- 1 boincer umatlas      9343 Jan  9 11:48 runtime_log.err
[2026-01-09 11:48:42] -rw------- 1 boincer umatlas       662 Jan  9 11:48 I2nMDmy3Cy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm1elKDmaBiX2n.diag
[2026-01-09 11:48:42] -rw-r--r-- 1 boincer umatlas     21308 Jan  9 11:48 stderr.txt
[2026-01-09 11:48:42] HITS file was successfully produced:
[2026-01-09 11:48:42] -rw------- 1 boincer umatlas 220532031 Jan  9 11:46 shared/HITS.pool.root.1
[2026-01-09 11:48:42]  *** Contents of shared directory: ***
[2026-01-09 11:48:42] total 436560
[2026-01-09 11:48:42] -rw-r--r-- 2 boincer umatlas 223941885 Jan  9 08:45 ATLAS.root_0
[2026-01-09 11:48:42] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 08:45 start_atlas.sh
[2026-01-09 11:48:42] -rw-r--r-- 2 boincer umatlas    592398 Jan  9 08:45 input.tar.gz
[2026-01-09 11:48:42] -rw------- 1 boincer umatlas 220532031 Jan  9 11:46 HITS.pool.root.1
[2026-01-09 11:48:42] -rw------- 1 boincer umatlas   1945600 Jan  9 11:48 result.tar.gz
11:48:43 (28103): run_atlas exited; CPU time 81166.181309
11:48:43 (28103): called boinc_finish(0)

</stderr_txt>
]]>

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