Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:00:10 (10806): wrapper (7.7.26015): starting
17:00:10 (10806): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 17:00:10] Arguments: --nthreads 8
[2026-01-09 17:00:10] Threads: 8
[2026-01-09 17:00:10] Checking for CVMFS
[2026-01-09 17:00:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 17:00:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 17:00:10] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 17:00:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 17:00:11] 2.11.2.0 23910 35628 121236 154948 0 57 16060012 25165824 0 130560 0 15772079 99.797 11495605 3862 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 17:00:11] CVMFS is ok
[2026-01-09 17:00:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 17:00:11] Checking for apptainer binary...
[2026-01-09 17:00:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 17:00:11] Running /usr/bin/apptainer --version
[2026-01-09 17:00:11] apptainer version 1.3.2-1.el7
[2026-01-09 17:00:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 17:00:12] cg-vwn369.simple-grid.lan
[2026-01-09 17:00:12] apptainer works
[2026-01-09 17:00:12] Set ATHENA_PROC_NUMBER=8
[2026-01-09 17:00:12] Set ATHENA_CORE_NUMBER=8
[2026-01-09 17:00:12] Starting ATLAS job with PandaID=6963147685
[2026-01-09 17:00:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 19:40:48]  *** The last 200 lines of the pilot log: ***
[2026-01-09 19:40:48] 2026-01-09 18:39:53,676 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 19:40:48] 2026-01-09 18:39:54,735 | INFO     | time since job start (9567s) is within the limit (349056.0s)
[2026-01-09 19:40:48] 2026-01-09 18:39:55,253 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 19:40:48] 2026-01-09 18:39:55,255 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 19:40:48] 2026-01-09 18:39:55,257 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6963147685/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 19:40:48] 2026-01-09 18:39:55,257 | INFO     | extracted standard info from prmon json
[2026-01-09 19:40:48] 2026-01-09 18:39:55,258 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 19:40:48] 2026-01-09 18:39:55,258 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 19:40:48] 2026-01-09 18:39:55,258 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 19:40:48] 2026-01-09 18:39:55,258 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 19:40:48] 2026-01-09 18:39:55,262 | INFO     | fitting pss+swap vs Time
[2026-01-09 19:40:48] 2026-01-09 18:39:55,262 | INFO     | sum of square deviations: 1199940638.0
[2026-01-09 19:40:48] 2026-01-09 18:39:55,263 | INFO     | sum of deviations: 14316243110.000002
[2026-01-09 19:40:48] 2026-01-09 18:39:55,264 | INFO     | mean x: 1767979216.0
[2026-01-09 19:40:48] 2026-01-09 18:39:55,264 | INFO     | mean y: 2469350.7579617836
[2026-01-09 19:40:48] 2026-01-09 18:39:55,264 | INFO     | intersect: -21090924329.007725
[2026-01-09 19:40:48] 2026-01-09 18:39:55,264 | INFO     | chi2: 2.2247012033677733
[2026-01-09 19:40:48] 2026-01-09 18:39:55,265 | INFO     | sum of square deviations: 1088905998.0
[2026-01-09 19:40:48] 2026-01-09 18:39:55,266 | INFO     | sum of deviations: 23993836502.0
[2026-01-09 19:40:48] 2026-01-09 18:39:55,266 | INFO     | mean x: 1767979063.5
[2026-01-09 19:40:48] 2026-01-09 18:39:55,266 | INFO     | mean y: 2482272.710526316
[2026-01-09 19:40:48] 2026-01-09 18:39:55,266 | INFO     | intersect: -38954600034.20324
[2026-01-09 19:40:48] 2026-01-09 18:39:55,266 | INFO     | chi2: 1.452650732880554
[2026-01-09 19:40:48] 2026-01-09 18:39:55,267 | INFO     | current chi2=1.452650732880554 (change=34.70355791233817 %)
[2026-01-09 19:40:48] 2026-01-09 18:39:55,267 | INFO     | sum of square deviations: 984941258.0
[2026-01-09 19:40:48] 2026-01-09 18:39:55,268 | INFO     | sum of deviations: 23049982648.000004
[2026-01-09 19:40:48] 2026-01-09 18:39:55,268 | INFO     | mean x: 1767978911.0
[2026-01-09 19:40:48] 2026-01-09 18:39:55,268 | INFO     | mean y: 2480887.741496599
[2026-01-09 19:40:48] 2026-01-09 18:39:55,268 | INFO     | intersect: -41372456845.42832
[2026-01-09 19:40:48] 2026-01-09 18:39:55,269 | INFO     | chi2: 1.4540529101507556
[2026-01-09 19:40:48] 2026-01-09 18:39:55,269 | INFO     | current chi2=1.4540529101507556 (change=-0.09652542338384845 %)
[2026-01-09 19:40:48] 2026-01-09 18:39:55,269 | INFO     | right removable region: 146
[2026-01-09 19:40:48] 2026-01-09 18:39:55,269 | INFO     | sum of square deviations: 1088905998.0
[2026-01-09 19:40:48] 2026-01-09 18:39:55,270 | INFO     | sum of deviations: -8314373566.0
[2026-01-09 19:40:48] 2026-01-09 18:39:55,270 | INFO     | mean x: 1767979368.5
[2026-01-09 19:40:48] 2026-01-09 18:39:55,271 | INFO     | mean y: 2499951.0
[2026-01-09 19:40:48] 2026-01-09 18:39:55,271 | INFO     | intersect: 13501958080.249622
[2026-01-09 19:40:48] 2026-01-09 18:39:55,271 | INFO     | chi2: 0.8439065092419831
[2026-01-09 19:40:48] 2026-01-09 18:39:55,271 | INFO     | current chi2=0.8439065092419831 (change=62.0665234520272 %)
[2026-01-09 19:40:48] 2026-01-09 18:39:55,272 | INFO     | sum of square deviations: 984941258.0
[2026-01-09 19:40:48] 2026-01-09 18:39:55,272 | INFO     | sum of deviations: -6213799526.0
[2026-01-09 19:40:48] 2026-01-09 18:39:55,273 | INFO     | mean x: 1767979521.0
[2026-01-09 19:40:48] 2026-01-09 18:39:55,273 | INFO     | mean y: 2496785.6326530613
[2026-01-09 19:40:48] 2026-01-09 18:39:55,273 | INFO     | intersect: 11156329788.704504
[2026-01-09 19:40:48] 2026-01-09 18:39:55,273 | INFO     | chi2: 0.8218759291525415
[2026-01-09 19:40:48] 2026-01-09 18:39:55,273 | INFO     | current chi2=0.8218759291525415 (change=2.6105474774960533 %)
[2026-01-09 19:40:48] 2026-01-09 18:39:55,273 | INFO     | left removable region: 20
[2026-01-09 19:40:48] 2026-01-09 18:39:55,274 | INFO     | sum of square deviations: 620244187.5
[2026-01-09 19:40:48] 2026-01-09 18:39:55,275 | INFO     | sum of deviations: 3765361792.5
[2026-01-09 19:40:48] 2026-01-09 18:39:55,275 | INFO     | mean x: 1767979490.5
[2026-01-09 19:40:48] 2026-01-09 18:39:55,275 | INFO     | mean y: 2510209.515873016
[2026-01-09 19:40:48] 2026-01-09 18:39:55,275 | INFO     | intersect: -10730492304.03419
[2026-01-09 19:40:48] 2026-01-09 18:39:55,275 | INFO     | chi2: 0.0008973108195540454
[2026-01-09 19:40:48] 2026-01-09 18:39:55,275 | INFO     | current memory leak: 6.07 B/s (using 126 data points, chi2=0.00)
[2026-01-09 19:40:48] 2026-01-09 18:39:55,276 | INFO     | could have reported an average CPU frequency of 1999 MHz (8 samples)
[2026-01-09 19:40:48] 2026-01-09 18:39:55,276 | INFO     | ..............................
[2026-01-09 19:40:48] 2026-01-09 18:39:55,276 | INFO     | . Timing measurements:
[2026-01-09 19:40:48] 2026-01-09 18:39:55,276 | INFO     | . get job = 0 s
[2026-01-09 19:40:48] 2026-01-09 18:39:55,276 | INFO     | . initial setup = 1 s
[2026-01-09 19:40:48] 2026-01-09 18:39:55,277 | INFO     | . payload setup = 7 s
[2026-01-09 19:40:48] 2026-01-09 18:39:55,277 | INFO     | . stage-in = 0 s
[2026-01-09 19:40:48] 2026-01-09 18:39:55,277 | INFO     | . payload execution = 9525 s
[2026-01-09 19:40:48] 2026-01-09 18:39:55,277 | INFO     | . stage-out = 1 s
[2026-01-09 19:40:48] 2026-01-09 18:39:55,277 | INFO     | . log creation = 0 s
[2026-01-09 19:40:48] 2026-01-09 18:39:55,277 | INFO     | ..............................
[2026-01-09 19:40:48] 2026-01-09 18:39:55,391 | INFO     | 
[2026-01-09 19:40:48] 2026-01-09 18:39:55,391 | INFO     | job summary report
[2026-01-09 19:40:48] 2026-01-09 18:39:55,391 | INFO     | --------------------------------------------------
[2026-01-09 19:40:48] 2026-01-09 18:39:55,392 | INFO     | PanDA job id: 6963147685
[2026-01-09 19:40:48] 2026-01-09 18:39:55,392 | INFO     | task id: 47898826
[2026-01-09 19:40:48] 2026-01-09 18:39:55,392 | INFO     | errors: (none)
[2026-01-09 19:40:48] 2026-01-09 18:39:55,392 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 19:40:48] 2026-01-09 18:39:55,392 | INFO     | pilot state: finished 
[2026-01-09 19:40:48] 2026-01-09 18:39:55,392 | INFO     | transexitcode: 0
[2026-01-09 19:40:48] 2026-01-09 18:39:55,392 | INFO     | exeerrorcode: 0
[2026-01-09 19:40:48] 2026-01-09 18:39:55,392 | INFO     | exeerrordiag: 
[2026-01-09 19:40:48] 2026-01-09 18:39:55,392 | INFO     | exitcode: 0
[2026-01-09 19:40:48] 2026-01-09 18:39:55,392 | INFO     | exitmsg: OK
[2026-01-09 19:40:48] 2026-01-09 18:39:55,393 | INFO     | cpuconsumptiontime: 71517 s
[2026-01-09 19:40:48] 2026-01-09 18:39:55,393 | INFO     | nevents: 400
[2026-01-09 19:40:48] 2026-01-09 18:39:55,393 | INFO     | neventsw: 0
[2026-01-09 19:40:48] 2026-01-09 18:39:55,393 | INFO     | pid: 20996
[2026-01-09 19:40:48] 2026-01-09 18:39:55,393 | INFO     | pgrp: 20996
[2026-01-09 19:40:48] 2026-01-09 18:39:55,393 | INFO     | corecount: 8
[2026-01-09 19:40:48] 2026-01-09 18:39:55,393 | INFO     | event service: False
[2026-01-09 19:40:48] 2026-01-09 18:39:55,393 | INFO     | sizes: {0: 2283798, 1: 2283997, 6: 2284259, 11: 2284287, 9536: 2312466, 9537: 2312465, 9539: 2321647, 9543: 2321703, 9552: 2321897}
[2026-01-09 19:40:48] 2026-01-09 18:39:55,393 | INFO     | --------------------------------------------------
[2026-01-09 19:40:48] 2026-01-09 18:39:55,394 | INFO     | 
[2026-01-09 19:40:48] 2026-01-09 18:39:55,394 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-01-09 19:40:48] 2026-01-09 18:39:55,417 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 19:40:48] 2026-01-09 18:39:55,418 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 19:40:48] 2026-01-09 18:39:55,418 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 19:40:48] 2026-01-09 18:39:55,418 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 19:40:48] 2026-01-09 18:39:55,418 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 19:40:48] 2026-01-09 18:39:55,418 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 19:40:48] 2026-01-09 18:39:55,418 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 19:40:48] 2026-01-09 18:39:55,418 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 19:40:48] 2026-01-09 18:39:55,419 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 19:40:48] 2026-01-09 18:39:55,419 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 19:40:48] 2026-01-09 18:39:55,419 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 19:40:48] 2026-01-09 18:39:55,419 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 19:40:48] 2026-01-09 18:39:55,419 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 19:40:48] 2026-01-09 18:39:55,419 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 19:40:48] 2026-01-09 18:39:55,419 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 19:40:48] 2026-01-09 18:39:55,420 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 19:40:48] 2026-01-09 18:39:55,420 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 19:40:48] 2026-01-09 18:39:55,420 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 19:40:48] 2026-01-09 18:39:55,420 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 19:40:48] 2026-01-09 18:39:55,420 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 19:40:48] 2026-01-09 18:39:55,420 | INFO     | job 6963147685 has completed (purged errors)
[2026-01-09 19:40:48] 2026-01-09 18:39:55,420 | INFO     | overall cleanup function is called
[2026-01-09 19:40:48] 2026-01-09 18:39:56,428 | INFO     | --- collectZombieJob: --- 10, [20996]
[2026-01-09 19:40:48] 2026-01-09 18:39:56,429 | INFO     | zombie collector waiting for pid 20996
[2026-01-09 19:40:48] 2026-01-09 18:39:56,429 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 19:40:48] 2026-01-09 18:39:56,429 | INFO     | collected zombie processes
[2026-01-09 19:40:48] 2026-01-09 18:39:56,429 | INFO     | will attempt to kill all subprocesses of pid=20996
[2026-01-09 19:40:48] 2026-01-09 18:39:56,495 | INFO     | process IDs to be killed: [20996] (in reverse order)
[2026-01-09 19:40:48] 2026-01-09 18:39:56,545 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 19:40:48] 2026-01-09 18:39:56,546 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 19:40:48] 2026-01-09 18:39:56,548 | INFO     | did not find any defunct processes belonging to 20996
[2026-01-09 19:40:48] 2026-01-09 18:39:56,550 | INFO     | did not find any defunct processes belonging to 20996
[2026-01-09 19:40:48] 2026-01-09 18:39:56,550 | INFO     | ready for new job
[2026-01-09 19:40:48] 2026-01-09 18:39:56,550 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 19:40:48] 2026-01-09 18:39:56,552 | INFO     | ***************************************
[2026-01-09 19:40:48] 2026-01-09 18:39:56,552 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 19:40:48] 2026-01-09 18:39:56,553 | INFO     | ***************************************
[2026-01-09 19:40:48] 2026-01-09 18:39:56,553 | INFO     | 
[2026-01-09 19:40:48] 2026-01-09 18:39:56,553 | INFO     | pilot is running in a VM
[2026-01-09 19:40:48] 2026-01-09 18:39:56,553 | INFO     | architecture information:
[2026-01-09 19:40:48] 2026-01-09 18:39:56,554 | INFO     | executing command: cat /etc/os-release
[2026-01-09 19:40:48] 2026-01-09 18:39:56,573 | INFO     | cat /etc/os-release:
[2026-01-09 19:40:48] NAME="CentOS Linux"
[2026-01-09 19:40:48] VERSION="7 (Core)"
[2026-01-09 19:40:48] ID="centos"
[2026-01-09 19:40:48] ID_LIKE="rhel fedora"
[2026-01-09 19:40:48] VERSION_ID="7"
[2026-01-09 19:40:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 19:40:48] ANSI_COLOR="0;31"
[2026-01-09 19:40:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 19:40:48] HOME_URL="https://www.centos.org/"
[2026-01-09 19:40:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 19:40:48] 
[2026-01-09 19:40:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 19:40:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 19:40:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 19:40:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 19:40:48] 
[2026-01-09 19:40:48] 2026-01-09 18:39:56,573 | INFO     | ***************************************
[2026-01-09 19:40:48] 2026-01-09 18:39:57,077 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-01-09 19:40:48] 2026-01-09 18:39:57,101 | INFO     | sufficient remaining disk space (497956159488 B)
[2026-01-09 19:40:48] 2026-01-09 18:39:57,101 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 19:40:48] 2026-01-09 18:39:57,102 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 19:40:48] 2026-01-09 18:39:57,102 | INFO     | update_server=False
[2026-01-09 19:40:48] 2026-01-09 18:39:57,102 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 19:40:48] 2026-01-09 18:39:57,102 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 19:40:48] 2026-01-09 18:39:57,103 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 19:40:48] 2026-01-09 18:39:57,103 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 19:40:48] 2026-01-09 18:39:57,184 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 19:40:48] 2026-01-09 18:39:57,185 | INFO     | aborting loop
[2026-01-09 19:40:48] 2026-01-09 18:39:57,768 | INFO     | all payload control threads have been joined
[2026-01-09 19:40:48] 2026-01-09 18:39:58,063 | INFO     | all data control threads have been joined
[2026-01-09 19:40:48] 2026-01-09 18:39:58,108 | INFO     | [job] retrieve thread has finished
[2026-01-09 19:40:48] 2026-01-09 18:39:58,109 | INFO     | [job] queue monitor thread has finished
[2026-01-09 19:40:48] 2026-01-09 18:39:58,190 | INFO     | [job] job monitor thread has finished
[2026-01-09 19:40:48] 2026-01-09 18:39:58,199 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 19:40:48] 2026-01-09 18:39:58,550 | INFO     | all job control threads have been joined
[2026-01-09 19:40:48] 2026-01-09 18:39:58,773 | INFO     | [payload] control thread has finished
[2026-01-09 19:40:48] 2026-01-09 18:39:58,830 | INFO     | [payload] failed_post thread has finished
[2026-01-09 19:40:48] 2026-01-09 18:39:58,899 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 19:40:48] 2026-01-09 18:39:59,069 | INFO     | [data] control thread has finished
[2026-01-09 19:40:48] 2026-01-09 18:39:59,109 | INFO     | [data] copytool_out thread has finished
[2026-01-09 19:40:48] 2026-01-09 18:39:59,123 | INFO     | [payload] validate_post thread has finished
[2026-01-09 19:40:48] 2026-01-09 18:39:59,393 | INFO     | [job] validate thread has finished
[2026-01-09 19:40:48] 2026-01-09 18:39:59,540 | INFO     | [data] copytool_in thread has finished
[2026-01-09 19:40:48] 2026-01-09 18:39:59,541 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 19:40:48] 2026-01-09 18:39:59,550 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 19:40:48] 2026-01-09 18:39:59,556 | INFO     | [job] control thread has finished
[2026-01-09 19:40:48] 2026-01-09 18:40:01,109 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 19:40:48] 2026-01-09 18:40:27,834 | INFO     | PID=14555 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 19:40:48] 2026-01-09 18:40:27,836 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 19:40:48] 2026-01-09 18:40:27,836 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 19:40:48] 2026-01-09 18:40:27,836 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 19:40:48] 2026-01-09 18:40:43,012 | INFO     | [monitor] cgroup control has ended
[2026-01-09 19:40:48] 2026-01-09 18:40:43,548 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140241949067072)>', '<ExcThread(monitor, started 140241654494976)>']
[2026-01-09 19:40:48] 2026-01-09 18:40:43,918 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 19:40:48] 2026-01-09 18:40:43,919 | INFO     | [monitor] control thread has ended
[2026-01-09 19:40:48] 2026-01-09 18:40:48,574 | INFO     | all workflow threads have been joined
[2026-01-09 19:40:48] 2026-01-09 18:40:48,574 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 19:40:48] 2026-01-09 18:40:48,574 | INFO     | traces error code: 0
[2026-01-09 19:40:48] 2026-01-09 18:40:48,575 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 19:40:48] 2026-01-09 18:40:48,715 [wrapper] ==== pilot stdout END ====
[2026-01-09 19:40:48] 2026-01-09 18:40:48,724 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 19:40:48] 2026-01-09 18:40:48,731 [wrapper] pilotpid: 14555
[2026-01-09 19:40:48] 2026-01-09 18:40:48,735 [wrapper] Pilot exit status: 0
[2026-01-09 19:40:48] 2026-01-09 18:40:48,750 [wrapper] pandaids: 6963147685
[2026-01-09 19:40:48] 2026-01-09 18:40:48,784 [wrapper] cleanup supervisor_pilot  5388 14556
[2026-01-09 19:40:48] 2026-01-09 18:40:48,788 [wrapper] Test setup, not cleaning
[2026-01-09 19:40:48] 2026-01-09 18:40:48,792 [wrapper] apfmon messages muted
[2026-01-09 19:40:48] 2026-01-09 18:40:48,795 [wrapper] ==== wrapper stdout END ====
[2026-01-09 19:40:48] 2026-01-09 18:40:48,798 [wrapper] ==== wrapper stderr END ====
[2026-01-09 19:40:48]  *** Error codes and diagnostics ***
[2026-01-09 19:40:48]     "exeErrorCode": 0,
[2026-01-09 19:40:48]     "exeErrorDiag": "",
[2026-01-09 19:40:48]     "pilotErrorCode": 0,
[2026-01-09 19:40:48]     "pilotErrorDiag": "",
[2026-01-09 19:40:48]  *** Listing of results directory ***
[2026-01-09 19:40:48] total 438280
[2026-01-09 19:40:48] -rw-r--r--. 1 boinc boinc    579449 Jan  8 17:02 pilot3.tar.gz
[2026-01-09 19:40:48] -rwx------. 1 boinc boinc     36322 Jan  8 17:06 runpilot2-wrapper.sh
[2026-01-09 19:40:48] -rw-r--r--. 1 boinc boinc      5112 Jan  8 17:07 queuedata.json
[2026-01-09 19:40:48] -rw-r--r--. 1 boinc boinc       100 Jan  9 17:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 19:40:48] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 17:00 run_atlas
[2026-01-09 19:40:48] -rw-r--r--. 1 boinc boinc       105 Jan  9 17:00 job.xml
[2026-01-09 19:40:48] -rw-r--r--. 2 boinc boinc 225960839 Jan  9 17:00 EVNT.47898824._000824.pool.root.1
[2026-01-09 19:40:48] -rw-r--r--. 2 boinc boinc     15847 Jan  9 17:00 start_atlas.sh
[2026-01-09 19:40:48] drwxrwx--x. 2 boinc boinc        68 Jan  9 17:00 shared
[2026-01-09 19:40:48] -rw-r--r--. 2 boinc boinc    592395 Jan  9 17:00 input.tar.gz
[2026-01-09 19:40:48] -rw-r--r--. 1 boinc boinc      6389 Jan  9 17:00 init_data.xml
[2026-01-09 19:40:48] -rw-r--r--. 1 boinc boinc         0 Jan  9 17:00 boinc_lockfile
[2026-01-09 19:40:48] -rw-r--r--. 1 boinc boinc      2519 Jan  9 17:00 pandaJob.out
[2026-01-09 19:40:48] -rw-------. 1 boinc boinc    989377 Jan  9 17:00 agis_schedconf.cvmfs.json
[2026-01-09 19:40:48] -rw-------. 1 boinc boinc   1516240 Jan  9 17:00 agis_ddmendpoints.agis.ALL.json
[2026-01-09 19:40:48] drwx------. 5 boinc boinc      4096 Jan  9 17:00 pilot3
[2026-01-09 19:40:48] -rw-------. 1 boinc boinc 215597549 Jan  9 19:38 HITS.47898826._027803.pool.root.1
[2026-01-09 19:40:48] -rw-r--r--. 1 boinc boinc       530 Jan  9 19:39 boinc_task_state.xml
[2026-01-09 19:40:48] -rw-------. 1 boinc boinc      1014 Jan  9 19:39 memory_monitor_summary.json
[2026-01-09 19:40:48] -rw-------. 1 boinc boinc    382427 Jan  9 19:39 log.47898826._027803.job.log.tgz.1
[2026-01-09 19:40:48] -rw-------. 1 boinc boinc      7767 Jan  9 19:39 heartbeat.json
[2026-01-09 19:40:48] -rw-r--r--. 1 boinc boinc        27 Jan  9 19:40 wrapper_checkpoint.txt
[2026-01-09 19:40:48] -rw-r--r--. 1 boinc boinc      8192 Jan  9 19:40 boinc_mmap_file
[2026-01-09 19:40:48] -rw-------. 1 boinc boinc        95 Jan  9 19:40 pilot_heartbeat.json
[2026-01-09 19:40:48] -rw-------. 1 boinc boinc      4809 Jan  9 19:40 pilotlog.txt
[2026-01-09 19:40:48] -rw-------. 1 boinc boinc   1284825 Jan  9 19:40 log.47898826._027803.job.log.1
[2026-01-09 19:40:48] -rw-------. 1 boinc boinc       357 Jan  9 19:40 output.list
[2026-01-09 19:40:48] -rw-r--r--. 1 boinc boinc       620 Jan  9 19:40 runtime_log
[2026-01-09 19:40:48] -rw-------. 1 boinc boinc   1689600 Jan  9 19:40 result.tar.gz
[2026-01-09 19:40:48] -rw-r--r--. 1 boinc boinc      8816 Jan  9 19:40 runtime_log.err
[2026-01-09 19:40:48] -rw-------. 1 boinc boinc       652 Jan  9 19:40 BbgLDmyh7x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm4ofKDm6RAd6m.diag
[2026-01-09 19:40:48] -rw-r--r--. 1 boinc boinc     20759 Jan  9 19:40 stderr.txt
[2026-01-09 19:40:48] HITS file was successfully produced:
[2026-01-09 19:40:48] -rw-------. 1 boinc boinc 215597549 Jan  9 19:38 shared/HITS.pool.root.1
[2026-01-09 19:40:48]  *** Contents of shared directory: ***
[2026-01-09 19:40:48] total 433464
[2026-01-09 19:40:48] -rw-r--r--. 2 boinc boinc 225960839 Jan  9 17:00 ATLAS.root_0
[2026-01-09 19:40:48] -rw-r--r--. 2 boinc boinc     15847 Jan  9 17:00 start_atlas.sh
[2026-01-09 19:40:48] -rw-r--r--. 2 boinc boinc    592395 Jan  9 17:00 input.tar.gz
[2026-01-09 19:40:48] -rw-------. 1 boinc boinc 215597549 Jan  9 19:38 HITS.pool.root.1
[2026-01-09 19:40:48] -rw-------. 1 boinc boinc   1689600 Jan  9 19:40 result.tar.gz
19:40:50 (10806): run_atlas exited; CPU time 71580.576719
19:40:50 (10806): called boinc_finish(0)

</stderr_txt>
]]>

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