Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:39:34 (2942556): wrapper (7.7.26015): starting
10:39:34 (2942556): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 10:39:34] Arguments: --nthreads 8
[2026-01-09 10:39:34] Threads: 8
[2026-01-09 10:39:34] Checking for CVMFS
[2026-01-09 10:39:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 10:39:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 10:39:34] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 10:39:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 10:39:34] 2.13.3.0 9943 20954 179600 154948 2 395 31167507 39288832 7585 16776704 0 10389084 99.568 13141265 38842 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 10:39:34] CVMFS is ok
[2026-01-09 10:39:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 10:39:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 10:39:34] Further information can be found at the LHC@home message board.
[2026-01-09 10:39:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 10:39:34] Checking for apptainer binary...
[2026-01-09 10:39:34] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 10:39:34] Running /usr/bin/apptainer --version
[2026-01-09 10:39:34] apptainer version 1.4.5-2.el9
[2026-01-09 10:39:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 10:39:34] c-210-6.aglt2.org
[2026-01-09 10:39:34] apptainer works
[2026-01-09 10:39:34] Set ATHENA_PROC_NUMBER=8
[2026-01-09 10:39:34] Set ATHENA_CORE_NUMBER=8
[2026-01-09 10:39:34] Starting ATLAS job with PandaID=6963161354
[2026-01-09 10:39:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 18:10:40]  *** The last 200 lines of the pilot log: ***
[2026-01-09 18:10:41] 2026-01-09 23:09:31,910 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 18:10:41] 2026-01-09 23:09:33,148 | INFO     | time since job start (26987s) is within the limit (349056.0s)
[2026-01-09 18:10:41] 2026-01-09 23:09:34,415 | INFO     | monitor loop #1739: job 0:6963161354 is in state 'finished'
[2026-01-09 18:10:41] 2026-01-09 23:09:34,416 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 18:10:41] 2026-01-09 23:09:35,159 | INFO     | time since job start (26989s) is within the limit (349056.0s)
[2026-01-09 18:10:41] 2026-01-09 23:09:36,925 | INFO     | monitor loop #1740: job 0:6963161354 is in state 'finished'
[2026-01-09 18:10:41] 2026-01-09 23:09:36,925 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 18:10:41] 2026-01-09 23:09:37,166 | INFO     | time since job start (26991s) is within the limit (349056.0s)
[2026-01-09 18:10:41] 2026-01-09 23:09:37,943 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 18:10:41] 2026-01-09 23:09:37,949 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.1895750000003
[2026-01-09 18:10:41] 2026-01-09 23:09:37,956 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963161354/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 18:10:41] 2026-01-09 23:09:37,957 | INFO     | extracted standard info from prmon json
[2026-01-09 18:10:41] 2026-01-09 23:09:37,957 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 18:10:41] 2026-01-09 23:09:37,957 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 18:10:41] 2026-01-09 23:09:37,957 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 18:10:41] 2026-01-09 23:09:37,958 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 18:10:41] 2026-01-09 23:09:37,966 | INFO     | fitting pss+swap vs Time
[2026-01-09 18:10:41] 2026-01-09 23:09:37,967 | INFO     | sum of square deviations: 26774671896.914135
[2026-01-09 18:10:41] 2026-01-09 23:09:37,972 | INFO     | sum of deviations: -8130051470.80092
[2026-01-09 18:10:41] 2026-01-09 23:09:37,972 | INFO     | mean x: 1767986664.158371
[2026-01-09 18:10:41] 2026-01-09 23:09:37,972 | INFO     | mean y: 2547212.0542986426
[2026-01-09 18:10:41] 2026-01-09 23:09:37,972 | INFO     | intersect: 539391235.1907243
[2026-01-09 18:10:41] 2026-01-09 23:09:37,973 | INFO     | chi2: 1.7722851661132963
[2026-01-09 18:10:41] 2026-01-09 23:09:37,974 | INFO     | sum of square deviations: 25876315897.221935
[2026-01-09 18:10:41] 2026-01-09 23:09:37,978 | INFO     | sum of deviations: -9138742234.391312
[2026-01-09 18:10:41] 2026-01-09 23:09:37,979 | INFO     | mean x: 1767986511.6659038
[2026-01-09 18:10:41] 2026-01-09 23:09:37,979 | INFO     | mean y: 2547040.8260869565
[2026-01-09 18:10:41] 2026-01-09 23:09:37,979 | INFO     | intersect: 626947093.2976209
[2026-01-09 18:10:41] 2026-01-09 23:09:37,980 | INFO     | chi2: 1.7714291386936996
[2026-01-09 18:10:41] 2026-01-09 23:09:37,980 | INFO     | current chi2=1.7714291386936996 (change=0.04830077213104994 %)
[2026-01-09 18:10:41] 2026-01-09 23:09:37,980 | INFO     | right removable region: 436
[2026-01-09 18:10:41] 2026-01-09 23:09:37,980 | INFO     | sum of square deviations: 25876138387.221947
[2026-01-09 18:10:41] 2026-01-09 23:09:37,985 | INFO     | sum of deviations: -63372613154.37293
[2026-01-09 18:10:41] 2026-01-09 23:09:37,985 | INFO     | mean x: 1767986816.6659038
[2026-01-09 18:10:41] 2026-01-09 23:09:37,986 | INFO     | mean y: 2556526.881006865
[2026-01-09 18:10:41] 2026-01-09 23:09:37,986 | INFO     | intersect: 4332489491.296119
[2026-01-09 18:10:41] 2026-01-09 23:09:37,986 | INFO     | chi2: 0.5547454083555919
[2026-01-09 18:10:41] 2026-01-09 23:09:37,987 | INFO     | current chi2=0.5547454083555919 (change=68.6988629729281 %)
[2026-01-09 18:10:41] 2026-01-09 23:09:37,987 | INFO     | sum of square deviations: 24997957619.324047
[2026-01-09 18:10:41] 2026-01-09 23:09:37,992 | INFO     | sum of deviations: -50934885821.16208
[2026-01-09 18:10:41] 2026-01-09 23:09:37,992 | INFO     | mean x: 1767986969.1712964
[2026-01-09 18:10:41] 2026-01-09 23:09:37,992 | INFO     | mean y: 2554358.1643518517
[2026-01-09 18:10:41] 2026-01-09 23:09:37,992 | INFO     | intersect: 3604937231.9728007
[2026-01-09 18:10:41] 2026-01-09 23:09:37,993 | INFO     | chi2: 0.5251852689978141
[2026-01-09 18:10:41] 2026-01-09 23:09:37,993 | INFO     | current chi2=0.5251852689978141 (change=5.328595588632567 %)
[2026-01-09 18:10:41] 2026-01-09 23:09:37,993 | INFO     | left removable region: 20
[2026-01-09 18:10:41] 2026-01-09 23:09:37,994 | INFO     | sum of square deviations: 22321892492.11538
[2026-01-09 18:10:41] 2026-01-09 23:09:37,998 | INFO     | sum of deviations: -8717311488.394245
[2026-01-09 18:10:41] 2026-01-09 23:09:37,998 | INFO     | mean x: 1767987091.1826923
[2026-01-09 18:10:41] 2026-01-09 23:09:37,998 | INFO     | mean y: 2546319.5841346155
[2026-01-09 18:10:41] 2026-01-09 23:09:37,998 | INFO     | intersect: 692993788.8900424
[2026-01-09 18:10:41] 2026-01-09 23:09:37,999 | INFO     | chi2: 0.37976184306199345
[2026-01-09 18:10:41] 2026-01-09 23:09:37,999 | INFO     | current memory leak: -0.39 B/s (using 416 data points, chi2=0.38)
[2026-01-09 18:10:41] 2026-01-09 23:09:38,000 | INFO     | could have reported an average CPU frequency of 2602 MHz (18 samples)
[2026-01-09 18:10:41] 2026-01-09 23:09:38,000 | INFO     | ..............................
[2026-01-09 18:10:41] 2026-01-09 23:09:38,000 | INFO     | . Timing measurements:
[2026-01-09 18:10:41] 2026-01-09 23:09:38,000 | INFO     | . get job = 0 s
[2026-01-09 18:10:41] 2026-01-09 23:09:38,000 | INFO     | . initial setup = 2 s
[2026-01-09 18:10:41] 2026-01-09 23:09:38,001 | INFO     | . payload setup = 6 s
[2026-01-09 18:10:41] 2026-01-09 23:09:38,001 | INFO     | . stage-in = 0 s
[2026-01-09 18:10:41] 2026-01-09 23:09:38,001 | INFO     | . payload execution = 26950 s
[2026-01-09 18:10:41] 2026-01-09 23:09:38,001 | INFO     | . stage-out = 2 s
[2026-01-09 18:10:41] 2026-01-09 23:09:38,001 | INFO     | . log creation = 0 s
[2026-01-09 18:10:41] 2026-01-09 23:09:38,001 | INFO     | ..............................
[2026-01-09 18:10:41] 2026-01-09 23:09:38,106 | INFO     | 
[2026-01-09 18:10:41] 2026-01-09 23:09:38,107 | INFO     | job summary report
[2026-01-09 18:10:41] 2026-01-09 23:09:38,107 | INFO     | --------------------------------------------------
[2026-01-09 18:10:41] 2026-01-09 23:09:38,107 | INFO     | PanDA job id: 6963161354
[2026-01-09 18:10:41] 2026-01-09 23:09:38,107 | INFO     | task id: 47898826
[2026-01-09 18:10:41] 2026-01-09 23:09:38,107 | INFO     | errors: (none)
[2026-01-09 18:10:41] 2026-01-09 23:09:38,107 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 18:10:41] 2026-01-09 23:09:38,107 | INFO     | pilot state: finished 
[2026-01-09 18:10:41] 2026-01-09 23:09:38,107 | INFO     | transexitcode: 0
[2026-01-09 18:10:41] 2026-01-09 23:09:38,107 | INFO     | exeerrorcode: 0
[2026-01-09 18:10:41] 2026-01-09 23:09:38,107 | INFO     | exeerrordiag: 
[2026-01-09 18:10:41] 2026-01-09 23:09:38,108 | INFO     | exitcode: 0
[2026-01-09 18:10:41] 2026-01-09 23:09:38,108 | INFO     | exitmsg: OK
[2026-01-09 18:10:41] 2026-01-09 23:09:38,108 | INFO     | cpuconsumptiontime: 66839 s
[2026-01-09 18:10:41] 2026-01-09 23:09:38,108 | INFO     | nevents: 400
[2026-01-09 18:10:41] 2026-01-09 23:09:38,108 | INFO     | neventsw: 0
[2026-01-09 18:10:41] 2026-01-09 23:09:38,108 | INFO     | pid: 2954096
[2026-01-09 18:10:41] 2026-01-09 23:09:38,108 | INFO     | pgrp: 2954096
[2026-01-09 18:10:41] 2026-01-09 23:09:38,108 | INFO     | corecount: 8
[2026-01-09 18:10:41] 2026-01-09 23:09:38,108 | INFO     | event service: False
[2026-01-09 18:10:41] 2026-01-09 23:09:38,108 | INFO     | sizes: {0: 2283800, 1: 2283999, 5: 2284261, 12: 2284317, 26960: 2321143, 26964: 2330141, 26967: 2330325, 26975: 2330519}
[2026-01-09 18:10:41] 2026-01-09 23:09:38,108 | INFO     | --------------------------------------------------
[2026-01-09 18:10:41] 2026-01-09 23:09:38,109 | INFO     | 
[2026-01-09 18:10:41] 2026-01-09 23:09:38,109 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-09 18:10:41] 2026-01-09 23:09:38,129 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 18:10:41] 2026-01-09 23:09:38,130 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 18:10:41] 2026-01-09 23:09:38,130 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 18:10:41] 2026-01-09 23:09:38,130 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 18:10:41] 2026-01-09 23:09:38,130 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 18:10:41] 2026-01-09 23:09:38,130 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 18:10:41] 2026-01-09 23:09:38,130 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 18:10:41] 2026-01-09 23:09:38,130 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 18:10:41] 2026-01-09 23:09:38,130 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 18:10:41] 2026-01-09 23:09:38,131 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 18:10:41] 2026-01-09 23:09:38,131 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 18:10:41] 2026-01-09 23:09:38,131 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 18:10:41] 2026-01-09 23:09:38,131 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 18:10:41] 2026-01-09 23:09:38,131 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 18:10:41] 2026-01-09 23:09:38,131 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 18:10:41] 2026-01-09 23:09:38,131 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 18:10:41] 2026-01-09 23:09:38,131 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 18:10:41] 2026-01-09 23:09:38,131 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 18:10:41] 2026-01-09 23:09:38,131 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 18:10:41] 2026-01-09 23:09:38,132 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 18:10:41] 2026-01-09 23:09:38,132 | INFO     | job 6963161354 has completed (purged errors)
[2026-01-09 18:10:41] 2026-01-09 23:09:38,132 | INFO     | overall cleanup function is called
[2026-01-09 18:10:41] 2026-01-09 23:09:39,143 | INFO     | --- collectZombieJob: --- 10, [2954096]
[2026-01-09 18:10:41] 2026-01-09 23:09:39,143 | INFO     | zombie collector waiting for pid 2954096
[2026-01-09 18:10:41] 2026-01-09 23:09:39,143 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 18:10:41] 2026-01-09 23:09:39,144 | INFO     | collected zombie processes
[2026-01-09 18:10:41] 2026-01-09 23:09:39,144 | INFO     | will attempt to kill all subprocesses of pid=2954096
[2026-01-09 18:10:41] 2026-01-09 23:09:39,371 | INFO     | process IDs to be killed: [2954096] (in reverse order)
[2026-01-09 18:10:41] 2026-01-09 23:09:39,455 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 18:10:41] 2026-01-09 23:09:39,455 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 18:10:41] 2026-01-09 23:09:39,463 | INFO     | did not find any defunct processes belonging to 2954096
[2026-01-09 18:10:41] 2026-01-09 23:09:39,473 | INFO     | did not find any defunct processes belonging to 2954096
[2026-01-09 18:10:41] 2026-01-09 23:09:39,474 | INFO     | ready for new job
[2026-01-09 18:10:41] 2026-01-09 23:09:39,474 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 18:10:41] 2026-01-09 23:09:39,477 | INFO     | ***************************************
[2026-01-09 18:10:41] 2026-01-09 23:09:39,477 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 18:10:41] 2026-01-09 23:09:39,477 | INFO     | ***************************************
[2026-01-09 18:10:41] 2026-01-09 23:09:39,478 | INFO     | 
[2026-01-09 18:10:41] 2026-01-09 23:09:39,480 | INFO     | architecture information:
[2026-01-09 18:10:41] 2026-01-09 23:09:39,480 | INFO     | executing command: cat /etc/os-release
[2026-01-09 18:10:41] 2026-01-09 23:09:39,524 | INFO     | cat /etc/os-release:
[2026-01-09 18:10:41] NAME="CentOS Linux"
[2026-01-09 18:10:41] VERSION="7 (Core)"
[2026-01-09 18:10:41] ID="centos"
[2026-01-09 18:10:41] ID_LIKE="rhel fedora"
[2026-01-09 18:10:41] VERSION_ID="7"
[2026-01-09 18:10:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 18:10:41] ANSI_COLOR="0;31"
[2026-01-09 18:10:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 18:10:41] HOME_URL="https://www.centos.org/"
[2026-01-09 18:10:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 18:10:41] 
[2026-01-09 18:10:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 18:10:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 18:10:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 18:10:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 18:10:41] 
[2026-01-09 18:10:41] 2026-01-09 23:09:39,524 | INFO     | ***************************************
[2026-01-09 18:10:41] 2026-01-09 23:09:40,028 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-09 18:10:41] 2026-01-09 23:09:40,049 | INFO     | sufficient remaining disk space (52754907136 B)
[2026-01-09 18:10:41] 2026-01-09 23:09:40,049 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 18:10:41] 2026-01-09 23:09:40,049 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 18:10:41] 2026-01-09 23:09:40,050 | INFO     | update_server=False
[2026-01-09 18:10:41] 2026-01-09 23:09:40,050 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 18:10:41] 2026-01-09 23:09:40,050 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 18:10:41] 2026-01-09 23:09:40,050 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 18:10:41] 2026-01-09 23:09:40,407 | INFO     | all data control threads have been joined
[2026-01-09 18:10:41] 2026-01-09 23:09:40,436 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 18:10:41] 2026-01-09 23:09:40,436 | INFO     | aborting loop
[2026-01-09 18:10:41] 2026-01-09 23:09:40,525 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 18:10:41] 2026-01-09 23:09:40,698 | INFO     | all payload control threads have been joined
[2026-01-09 18:10:41] 2026-01-09 23:09:41,056 | INFO     | [job] retrieve thread has finished
[2026-01-09 18:10:41] 2026-01-09 23:09:41,061 | INFO     | [job] queue monitor thread has finished
[2026-01-09 18:10:41] 2026-01-09 23:09:41,162 | INFO     | [data] copytool_in thread has finished
[2026-01-09 18:10:41] 2026-01-09 23:09:41,403 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 18:10:41] 2026-01-09 23:09:41,413 | INFO     | [data] control thread has finished
[2026-01-09 18:10:41] 2026-01-09 23:09:41,442 | INFO     | [job] job monitor thread has finished
[2026-01-09 18:10:41] 2026-01-09 23:09:41,510 | INFO     | [payload] failed_post thread has finished
[2026-01-09 18:10:41] 2026-01-09 23:09:41,562 | INFO     | all job control threads have been joined
[2026-01-09 18:10:41] 2026-01-09 23:09:41,624 | INFO     | [payload] validate_post thread has finished
[2026-01-09 18:10:41] 2026-01-09 23:09:41,703 | INFO     | [payload] control thread has finished
[2026-01-09 18:10:41] 2026-01-09 23:09:41,939 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 18:10:41] 2026-01-09 23:09:41,961 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 18:10:41] 2026-01-09 23:09:42,028 | INFO     | [job] validate thread has finished
[2026-01-09 18:10:41] 2026-01-09 23:09:42,057 | INFO     | [data] copytool_out thread has finished
[2026-01-09 18:10:41] 2026-01-09 23:09:42,268 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 18:10:41] 2026-01-09 23:09:42,578 | INFO     | [job] control thread has finished
[2026-01-09 18:10:41] 2026-01-09 23:09:44,534 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 18:10:41] 2026-01-09 23:09:48,993 [wrapper] supervise_pilot (15 min periods counter: 31)
[2026-01-09 18:10:41] 2026-01-09 23:10:10,589 | INFO     | PID=2946499 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 18:10:41] 2026-01-09 23:10:10,590 | INFO     | .. there are 7 such processes running
[2026-01-09 18:10:41] 2026-01-09 23:10:10,590 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 18:10:41] 2026-01-09 23:10:10,590 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 18:10:41] 2026-01-09 23:10:10,590 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 18:10:41] 2026-01-09 23:10:34,374 | INFO     | [monitor] cgroup control has ended
[2026-01-09 18:10:41] 2026-01-09 23:10:35,345 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140486108624704)>', '<ExcThread(monitor, started 140485737826048)>']
[2026-01-09 18:10:41] 2026-01-09 23:10:35,734 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 18:10:41] 2026-01-09 23:10:35,734 | INFO     | [monitor] control thread has ended
[2026-01-09 18:10:41] 2026-01-09 23:10:40,371 | INFO     | all workflow threads have been joined
[2026-01-09 18:10:41] 2026-01-09 23:10:40,371 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 18:10:41] 2026-01-09 23:10:40,372 | INFO     | traces error code: 0
[2026-01-09 18:10:41] 2026-01-09 23:10:40,372 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 18:10:41] 2026-01-09 23:10:40,766 [wrapper] ==== pilot stdout END ====
[2026-01-09 18:10:41] 2026-01-09 23:10:40,769 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 18:10:41] 2026-01-09 23:10:40,771 [wrapper] pilotpid: 2946499
[2026-01-09 18:10:41] 2026-01-09 23:10:40,774 [wrapper] Pilot exit status: 0
[2026-01-09 18:10:41] 2026-01-09 23:10:40,788 [wrapper] pandaids: 6963161354
[2026-01-09 18:10:41] 2026-01-09 23:10:40,840 [wrapper] cleanup supervisor_pilot 3626421 2946500
[2026-01-09 18:10:41] 2026-01-09 23:10:40,842 [wrapper] Test setup, not cleaning
[2026-01-09 18:10:41] 2026-01-09 23:10:40,845 [wrapper] apfmon messages muted
[2026-01-09 18:10:41] 2026-01-09 23:10:40,847 [wrapper] ==== wrapper stdout END ====
[2026-01-09 18:10:41] 2026-01-09 23:10:40,850 [wrapper] ==== wrapper stderr END ====
[2026-01-09 18:10:41]  *** Error codes and diagnostics ***
[2026-01-09 18:10:41]     "exeErrorCode": 0,
[2026-01-09 18:10:41]     "exeErrorDiag": "",
[2026-01-09 18:10:41]     "pilotErrorCode": 0,
[2026-01-09 18:10:41]     "pilotErrorDiag": "",
[2026-01-09 18:10:41]  *** Listing of results directory ***
[2026-01-09 18:10:41] total 448908
[2026-01-09 18:10:41] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 16:44 pilot3.tar.gz
[2026-01-09 18:10:41] -rwx------. 1 boincer umatlas     36322 Jan  8 16:49 runpilot2-wrapper.sh
[2026-01-09 18:10:41] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 16:51 queuedata.json
[2026-01-09 18:10:41] -rw-r--r--. 1 boincer umatlas       100 Jan  9 10:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 18:10:41] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 10:39 run_atlas
[2026-01-09 18:10:41] -rw-r--r--. 1 boincer umatlas       105 Jan  9 10:39 job.xml
[2026-01-09 18:10:41] -rw-r--r--. 2 boincer umatlas 225816998 Jan  9 10:39 EVNT.47898824._001278.pool.root.1
[2026-01-09 18:10:41] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 10:39 start_atlas.sh
[2026-01-09 18:10:41] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 10:39 shared
[2026-01-09 18:10:41] -rw-r--r--. 2 boincer umatlas    592398 Jan  9 10:39 input.tar.gz
[2026-01-09 18:10:41] -rw-r--r--. 1 boincer umatlas         0 Jan  9 10:39 boinc_lockfile
[2026-01-09 18:10:41] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 10:39 pandaJob.out
[2026-01-09 18:10:41] -rw-------. 1 boincer umatlas        57 Jan  9 10:39 setup.sh.local
[2026-01-09 18:10:41] -rw-------. 1 boincer umatlas    989377 Jan  9 10:39 agis_schedconf.cvmfs.json
[2026-01-09 18:10:41] drwx------. 5 boincer umatlas      4096 Jan  9 10:39 pilot3
[2026-01-09 18:10:41] -rw-r--r--. 1 boincer umatlas      6659 Jan  9 18:00 init_data.xml
[2026-01-09 18:10:41] -rw-------. 1 boincer umatlas 221650302 Jan  9 18:08 HITS.47898826._033063.pool.root.1
[2026-01-09 18:10:41] -rw-r--r--. 1 boincer umatlas       531 Jan  9 18:08 boinc_task_state.xml
[2026-01-09 18:10:41] -rw-------. 1 boincer umatlas      1040 Jan  9 18:09 memory_monitor_summary.json
[2026-01-09 18:10:41] -rw-------. 1 boincer umatlas   1516240 Jan  9 18:09 agis_ddmendpoints.agis.ALL.json
[2026-01-09 18:10:41] -rw-------. 1 boincer umatlas    627852 Jan  9 18:09 log.47898826._033063.job.log.tgz.1
[2026-01-09 18:10:41] -rw-------. 1 boincer umatlas        95 Jan  9 18:09 pilot_heartbeat.json
[2026-01-09 18:10:41] -rw-------. 1 boincer umatlas      7822 Jan  9 18:09 heartbeat.json
[2026-01-09 18:10:41] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 18:10 boinc_mmap_file
[2026-01-09 18:10:41] -rw-r--r--. 1 boincer umatlas        28 Jan  9 18:10 wrapper_checkpoint.txt
[2026-01-09 18:10:41] -rw-------. 1 boincer umatlas      4823 Jan  9 18:10 pilotlog.txt
[2026-01-09 18:10:41] -rw-------. 1 boincer umatlas   3516406 Jan  9 18:10 log.47898826._033063.job.log.1
[2026-01-09 18:10:41] -rw-------. 1 boincer umatlas       357 Jan  9 18:10 output.list
[2026-01-09 18:10:41] -rw-r--r--. 1 boincer umatlas       620 Jan  9 18:10 runtime_log
[2026-01-09 18:10:41] -rw-------. 1 boincer umatlas   4167680 Jan  9 18:10 result.tar.gz
[2026-01-09 18:10:41] -rw-r--r--. 1 boincer umatlas      9338 Jan  9 18:10 runtime_log.err
[2026-01-09 18:10:41] -rw-------. 1 boincer umatlas       656 Jan  9 18:10 exOKDmY3Cy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmaOgKDmvhZ4Ao.diag
[2026-01-09 18:10:41] -rw-r--r--. 1 boincer umatlas     21395 Jan  9 18:10 stderr.txt
[2026-01-09 18:10:41] HITS file was successfully produced:
[2026-01-09 18:10:41] -rw-------. 1 boincer umatlas 221650302 Jan  9 18:08 shared/HITS.pool.root.1
[2026-01-09 18:10:41]  *** Contents of shared directory: ***
[2026-01-09 18:10:41] total 441660
[2026-01-09 18:10:41] -rw-r--r--. 2 boincer umatlas 225816998 Jan  9 10:39 ATLAS.root_0
[2026-01-09 18:10:41] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 10:39 start_atlas.sh
[2026-01-09 18:10:41] -rw-r--r--. 2 boincer umatlas    592398 Jan  9 10:39 input.tar.gz
[2026-01-09 18:10:41] -rw-------. 1 boincer umatlas 221650302 Jan  9 18:08 HITS.pool.root.1
[2026-01-09 18:10:41] -rw-------. 1 boincer umatlas   4167680 Jan  9 18:10 result.tar.gz
18:10:42 (2942556): run_atlas exited; CPU time 67474.177031
18:10:42 (2942556): called boinc_finish(0)

</stderr_txt>
]]>

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