Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:31:39 (1019897): wrapper (7.7.26015): starting
10:31:39 (1019897): wrapper: running run_atlas (--nthreads 9)
[2026-01-09 10:31:39] Arguments: --nthreads 9
[2026-01-09 10:31:39] Threads: 9
[2026-01-09 10:31:39] Checking for CVMFS
[2026-01-09 10:31:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 10:31:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 10:31:40] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 10:31:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 10:31:40] 2.13.3.0 7268 23066 206468 154948 0 69 40324627 40960001 23367 16776704 0 55696691 99.657 52915389 39181 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 10:31:40] CVMFS is ok
[2026-01-09 10:31:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 10:31:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 10:31:40] Further information can be found at the LHC@home message board.
[2026-01-09 10:31:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 10:31:40] Checking for apptainer binary...
[2026-01-09 10:31:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 10:31:40] Running /usr/bin/apptainer --version
[2026-01-09 10:31:40] apptainer version 1.4.5-2.el9
[2026-01-09 10:31:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 10:31:40] c-212-18.aglt2.org
[2026-01-09 10:31:40] apptainer works
[2026-01-09 10:31:40] Set ATHENA_PROC_NUMBER=9
[2026-01-09 10:31:40] Set ATHENA_CORE_NUMBER=9
[2026-01-09 10:31:41] Starting ATLAS job with PandaID=6963161645
[2026-01-09 10:31:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 19:33:15]  *** The last 200 lines of the pilot log: ***
[2026-01-09 19:33:15] 2026-01-10 00:32:35,273 | INFO     | monitor loop #2067: job 0:6963161645 is in state 'finished'
[2026-01-09 19:33:15] 2026-01-10 00:32:35,273 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 19:33:15] 2026-01-10 00:32:35,971 | INFO     | time since job start (32426s) is within the limit (349056.0s)
[2026-01-09 19:33:15] 2026-01-10 00:32:37,783 | INFO     | monitor loop #2068: job 0:6963161645 is in state 'finished'
[2026-01-09 19:33:15] 2026-01-10 00:32:37,783 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 19:33:15] 2026-01-10 00:32:37,978 | INFO     | time since job start (32428s) is within the limit (349056.0s)
[2026-01-09 19:33:15] 2026-01-10 00:32:39,985 | INFO     | time since job start (32430s) is within the limit (349056.0s)
[2026-01-09 19:33:15] 2026-01-10 00:32:40,289 | INFO     | monitor loop #2069: job 0:6963161645 is in state 'finished'
[2026-01-09 19:33:15] 2026-01-10 00:32:40,289 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 19:33:15] 2026-01-10 00:32:41,294 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 19:33:15] 2026-01-10 00:32:41,306 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3368.3131874999995
[2026-01-09 19:33:15] 2026-01-10 00:32:41,319 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963161645/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 19:33:15] 2026-01-10 00:32:41,320 | INFO     | extracted standard info from prmon json
[2026-01-09 19:33:15] 2026-01-10 00:32:41,320 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 19:33:15] 2026-01-10 00:32:41,320 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 19:33:15] 2026-01-10 00:32:41,320 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 19:33:15] 2026-01-10 00:32:41,320 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 19:33:15] 2026-01-10 00:32:41,337 | INFO     | fitting pss+swap vs Time
[2026-01-09 19:33:15] 2026-01-10 00:32:41,338 | INFO     | sum of square deviations: 46425829985.93213
[2026-01-09 19:33:15] 2026-01-10 00:32:41,348 | INFO     | sum of deviations: 77310215069.31656
[2026-01-09 19:33:15] 2026-01-10 00:32:41,348 | INFO     | mean x: 1767988961.0112994
[2026-01-09 19:33:15] 2026-01-10 00:32:41,348 | INFO     | mean y: 2566848.9472693033
[2026-01-09 19:33:15] 2026-01-10 00:32:41,348 | INFO     | intersect: -2941561599.749904
[2026-01-09 19:33:15] 2026-01-10 00:32:41,353 | INFO     | chi2: 3.7498400218411856
[2026-01-09 19:33:15] 2026-01-10 00:32:41,353 | INFO     | sum of square deviations: 45126672573.431404
[2026-01-09 19:33:15] 2026-01-10 00:32:41,363 | INFO     | sum of deviations: 114646460036.42024
[2026-01-09 19:33:15] 2026-01-10 00:32:41,363 | INFO     | mean x: 1767988808.511407
[2026-01-09 19:33:15] 2026-01-10 00:32:41,363 | INFO     | mean y: 2571199.013307985
[2026-01-09 19:33:15] 2026-01-10 00:32:41,363 | INFO     | intersect: -4489088538.3629055
[2026-01-09 19:33:15] 2026-01-10 00:32:41,364 | INFO     | chi2: 2.968512799838502
[2026-01-09 19:33:15] 2026-01-10 00:32:41,364 | INFO     | current chi2=2.968512799838502 (change=20.836281480057618 %)
[2026-01-09 19:33:15] 2026-01-10 00:32:41,364 | INFO     | right removable region: 525
[2026-01-09 19:33:15] 2026-01-10 00:32:41,364 | INFO     | sum of square deviations: 45126668913.431404
[2026-01-09 19:33:15] 2026-01-10 00:32:41,374 | INFO     | sum of deviations: -59512290726.49437
[2026-01-09 19:33:15] 2026-01-10 00:32:41,374 | INFO     | mean x: 1767989113.511407
[2026-01-09 19:33:15] 2026-01-10 00:32:41,374 | INFO     | mean y: 2582884.74904943
[2026-01-09 19:33:15] 2026-01-10 00:32:41,374 | INFO     | intersect: 2334177142.8231554
[2026-01-09 19:33:15] 2026-01-10 00:32:41,390 | INFO     | chi2: 1.3202391641593405
[2026-01-09 19:33:15] 2026-01-10 00:32:41,390 | INFO     | current chi2=1.3202391641593405 (change=64.79212029127851 %)
[2026-01-09 19:33:15] 2026-01-10 00:32:41,391 | INFO     | sum of square deviations: 43851973415.93099
[2026-01-09 19:33:15] 2026-01-10 00:32:41,399 | INFO     | sum of deviations: -92239956605.52405
[2026-01-09 19:33:15] 2026-01-10 00:32:41,399 | INFO     | mean x: 1767989266.0115163
[2026-01-09 19:33:15] 2026-01-10 00:32:41,400 | INFO     | mean y: 2586796.5873320536
[2026-01-09 19:33:15] 2026-01-10 00:32:41,400 | INFO     | intersect: 3721444591.8602242
[2026-01-09 19:33:15] 2026-01-10 00:32:41,400 | INFO     | chi2: 1.1757010191747668
[2026-01-09 19:33:15] 2026-01-10 00:32:41,400 | INFO     | current chi2=1.1757010191747668 (change=10.947875877974585 %)
[2026-01-09 19:33:15] 2026-01-10 00:32:41,400 | INFO     | left removable region: 20
[2026-01-09 19:33:15] 2026-01-10 00:32:41,406 | INFO     | sum of square deviations: 39934651991.92881
[2026-01-09 19:33:15] 2026-01-10 00:32:41,415 | INFO     | sum of deviations: -60422256491.88512
[2026-01-09 19:33:15] 2026-01-10 00:32:41,415 | INFO     | mean x: 1767989388.011881
[2026-01-09 19:33:15] 2026-01-10 00:32:41,415 | INFO     | mean y: 2592294.6475247527
[2026-01-09 19:33:15] 2026-01-10 00:32:41,416 | INFO     | intersect: 2677610178.8393154
[2026-01-09 19:33:15] 2026-01-10 00:32:41,416 | INFO     | chi2: 0.3413500376820043
[2026-01-09 19:33:15] 2026-01-10 00:32:41,416 | INFO     | current memory leak: -1.51 B/s (using 505 data points, chi2=0.34)
[2026-01-09 19:33:15] 2026-01-10 00:32:41,417 | INFO     | could have reported an average CPU frequency of 3310 MHz (21 samples)
[2026-01-09 19:33:15] 2026-01-10 00:32:41,417 | INFO     | ..............................
[2026-01-09 19:33:15] 2026-01-10 00:32:41,417 | INFO     | . Timing measurements:
[2026-01-09 19:33:15] 2026-01-10 00:32:41,417 | INFO     | . get job = 0 s
[2026-01-09 19:33:15] 2026-01-10 00:32:41,417 | INFO     | . initial setup = 3 s
[2026-01-09 19:33:15] 2026-01-10 00:32:41,417 | INFO     | . payload setup = 20 s
[2026-01-09 19:33:15] 2026-01-10 00:32:41,417 | INFO     | . stage-in = 0 s
[2026-01-09 19:33:15] 2026-01-10 00:32:41,417 | INFO     | . payload execution = 32357 s
[2026-01-09 19:33:15] 2026-01-10 00:32:41,417 | INFO     | . stage-out = 3 s
[2026-01-09 19:33:15] 2026-01-10 00:32:41,417 | INFO     | . log creation = 0 s
[2026-01-09 19:33:15] 2026-01-10 00:32:41,422 | INFO     | ..............................
[2026-01-09 19:33:15] 2026-01-10 00:32:41,566 | INFO     | 
[2026-01-09 19:33:15] 2026-01-10 00:32:41,566 | INFO     | job summary report
[2026-01-09 19:33:15] 2026-01-10 00:32:41,566 | INFO     | --------------------------------------------------
[2026-01-09 19:33:15] 2026-01-10 00:32:41,566 | INFO     | PanDA job id: 6963161645
[2026-01-09 19:33:15] 2026-01-10 00:32:41,566 | INFO     | task id: 47898826
[2026-01-09 19:33:15] 2026-01-10 00:32:41,566 | INFO     | errors: (none)
[2026-01-09 19:33:15] 2026-01-10 00:32:41,566 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 19:33:15] 2026-01-10 00:32:41,566 | INFO     | pilot state: finished 
[2026-01-09 19:33:15] 2026-01-10 00:32:41,567 | INFO     | transexitcode: 0
[2026-01-09 19:33:15] 2026-01-10 00:32:41,567 | INFO     | exeerrorcode: 0
[2026-01-09 19:33:15] 2026-01-10 00:32:41,567 | INFO     | exeerrordiag: 
[2026-01-09 19:33:15] 2026-01-10 00:32:41,567 | INFO     | exitcode: 0
[2026-01-09 19:33:15] 2026-01-10 00:32:41,567 | INFO     | exitmsg: OK
[2026-01-09 19:33:15] 2026-01-10 00:32:41,567 | INFO     | cpuconsumptiontime: 42921 s
[2026-01-09 19:33:15] 2026-01-10 00:32:41,567 | INFO     | nevents: 400
[2026-01-09 19:33:15] 2026-01-10 00:32:41,567 | INFO     | neventsw: 0
[2026-01-09 19:33:15] 2026-01-10 00:32:41,567 | INFO     | pid: 1035304
[2026-01-09 19:33:15] 2026-01-10 00:32:41,567 | INFO     | pgrp: 1035304
[2026-01-09 19:33:15] 2026-01-10 00:32:41,567 | INFO     | corecount: 9
[2026-01-09 19:33:15] 2026-01-10 00:32:41,567 | INFO     | event service: False
[2026-01-09 19:33:15] 2026-01-10 00:32:41,567 | INFO     | sizes: {0: 2283744, 1: 2283999, 12: 2284289, 23: 2284289, 32381: 2323872, 32385: 2332870, 32387: 2333054, 32399: 2333248}
[2026-01-09 19:33:15] 2026-01-10 00:32:41,568 | INFO     | --------------------------------------------------
[2026-01-09 19:33:15] 2026-01-10 00:32:41,568 | INFO     | 
[2026-01-09 19:33:15] 2026-01-10 00:32:41,568 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 19:33:15] 2026-01-10 00:32:41,594 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 19:33:15] 2026-01-10 00:32:41,594 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 19:33:15] 2026-01-10 00:32:41,594 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 19:33:15] 2026-01-10 00:32:41,594 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 19:33:15] 2026-01-10 00:32:41,594 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 19:33:15] 2026-01-10 00:32:41,594 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 19:33:15] 2026-01-10 00:32:41,594 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 19:33:15] 2026-01-10 00:32:41,594 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 19:33:15] 2026-01-10 00:32:41,594 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 19:33:15] 2026-01-10 00:32:41,594 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 19:33:15] 2026-01-10 00:32:41,595 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 19:33:15] 2026-01-10 00:32:41,595 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 19:33:15] 2026-01-10 00:32:41,595 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 19:33:15] 2026-01-10 00:32:41,595 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 19:33:15] 2026-01-10 00:32:41,595 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 19:33:15] 2026-01-10 00:32:41,595 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 19:33:15] 2026-01-10 00:32:41,595 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 19:33:15] 2026-01-10 00:32:41,595 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 19:33:15] 2026-01-10 00:32:41,595 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 19:33:15] 2026-01-10 00:32:41,595 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 19:33:15] 2026-01-10 00:32:41,595 | INFO     | job 6963161645 has completed (purged errors)
[2026-01-09 19:33:15] 2026-01-10 00:32:41,596 | INFO     | overall cleanup function is called
[2026-01-09 19:33:15] 2026-01-10 00:32:42,607 | INFO     | --- collectZombieJob: --- 10, [1035304]
[2026-01-09 19:33:15] 2026-01-10 00:32:42,607 | INFO     | zombie collector waiting for pid 1035304
[2026-01-09 19:33:15] 2026-01-10 00:32:42,607 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 19:33:15] 2026-01-10 00:32:42,607 | INFO     | collected zombie processes
[2026-01-09 19:33:15] 2026-01-10 00:32:42,607 | INFO     | will attempt to kill all subprocesses of pid=1035304
[2026-01-09 19:33:15] 2026-01-10 00:32:43,541 | INFO     | process IDs to be killed: [1035304] (in reverse order)
[2026-01-09 19:33:15] 2026-01-10 00:32:43,765 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 19:33:15] 2026-01-10 00:32:43,765 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 19:33:15] 2026-01-10 00:32:43,850 | INFO     | did not find any defunct processes belonging to 1035304
[2026-01-09 19:33:15] 2026-01-10 00:32:43,871 | INFO     | did not find any defunct processes belonging to 1035304
[2026-01-09 19:33:15] 2026-01-10 00:32:43,872 | INFO     | ready for new job
[2026-01-09 19:33:15] 2026-01-10 00:32:43,872 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 19:33:15] 2026-01-10 00:32:43,874 | INFO     | ***************************************
[2026-01-09 19:33:15] 2026-01-10 00:32:43,874 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 19:33:15] 2026-01-10 00:32:43,875 | INFO     | ***************************************
[2026-01-09 19:33:15] 2026-01-10 00:32:43,875 | INFO     | 
[2026-01-09 19:33:15] 2026-01-10 00:32:43,879 | INFO     | architecture information:
[2026-01-09 19:33:15] 2026-01-10 00:32:43,880 | INFO     | executing command: cat /etc/os-release
[2026-01-09 19:33:15] 2026-01-10 00:32:43,923 | INFO     | cat /etc/os-release:
[2026-01-09 19:33:15] NAME="CentOS Linux"
[2026-01-09 19:33:15] VERSION="7 (Core)"
[2026-01-09 19:33:15] ID="centos"
[2026-01-09 19:33:15] ID_LIKE="rhel fedora"
[2026-01-09 19:33:15] VERSION_ID="7"
[2026-01-09 19:33:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 19:33:15] ANSI_COLOR="0;31"
[2026-01-09 19:33:15] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 19:33:15] HOME_URL="https://www.centos.org/"
[2026-01-09 19:33:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 19:33:15] 
[2026-01-09 19:33:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 19:33:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 19:33:15] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 19:33:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 19:33:15] 
[2026-01-09 19:33:15] 2026-01-10 00:32:43,923 | INFO     | ***************************************
[2026-01-09 19:33:15] 2026-01-10 00:32:44,426 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 19:33:15] 2026-01-10 00:32:44,450 | INFO     | sufficient remaining disk space (126226530304 B)
[2026-01-09 19:33:15] 2026-01-10 00:32:44,450 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 19:33:15] 2026-01-10 00:32:44,450 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 19:33:15] 2026-01-10 00:32:44,450 | INFO     | update_server=False
[2026-01-09 19:33:15] 2026-01-10 00:32:44,450 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 19:33:15] 2026-01-10 00:32:44,450 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 19:33:15] 2026-01-10 00:32:44,451 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 19:33:15] 2026-01-10 00:32:44,451 | INFO     | aborting loop
[2026-01-09 19:33:15] 2026-01-10 00:32:44,615 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 19:33:15] 2026-01-10 00:32:44,654 | INFO     | all data control threads have been joined
[2026-01-09 19:33:15] 2026-01-10 00:32:45,019 | INFO     | all payload control threads have been joined
[2026-01-09 19:33:15] 2026-01-10 00:32:45,265 | INFO     | all job control threads have been joined
[2026-01-09 19:33:15] 2026-01-10 00:32:45,455 | INFO     | [job] retrieve thread has finished
[2026-01-09 19:33:15] 2026-01-10 00:32:45,459 | INFO     | [job] job monitor thread has finished
[2026-01-09 19:33:15] 2026-01-10 00:32:45,691 | INFO     | [data] control thread has finished
[2026-01-09 19:33:15] 2026-01-10 00:32:45,789 | INFO     | [payload] validate_post thread has finished
[2026-01-09 19:33:15] 2026-01-10 00:32:45,849 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 19:33:15] 2026-01-10 00:32:46,015 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 19:33:15] 2026-01-10 00:32:46,029 | INFO     | [payload] control thread has finished
[2026-01-09 19:33:15] 2026-01-10 00:32:46,271 | INFO     | [job] control thread has finished
[2026-01-09 19:33:15] 2026-01-10 00:32:46,459 | INFO     | [data] copytool_out thread has finished
[2026-01-09 19:33:15] 2026-01-10 00:32:46,583 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 19:33:15] 2026-01-10 00:32:46,598 | INFO     | [payload] failed_post thread has finished
[2026-01-09 19:33:15] 2026-01-10 00:32:46,889 | INFO     | [data] copytool_in thread has finished
[2026-01-09 19:33:15] 2026-01-10 00:32:46,893 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 19:33:15] 2026-01-10 00:32:46,897 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 19:33:15] 2026-01-10 00:32:46,897 | INFO     | [job] validate thread has finished
[2026-01-09 19:33:15] 2026-01-10 00:32:47,591 | INFO     | [job] queue monitor thread has finished
[2026-01-09 19:33:15] 2026-01-10 00:32:48,624 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 19:33:15] 2026-01-10 00:33:05,162 | INFO     | [monitor] cgroup control has ended
[2026-01-09 19:33:15] 2026-01-10 00:33:06,774 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140130417506112)>', '<ExcThread(monitor, started 140130035668736)>']
[2026-01-09 19:33:15] 2026-01-10 00:33:11,847 | INFO     | all workflow threads have been joined
[2026-01-09 19:33:15] 2026-01-10 00:33:11,847 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 19:33:15] 2026-01-10 00:33:11,847 | INFO     | traces error code: 0
[2026-01-09 19:33:15] 2026-01-10 00:33:11,847 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 19:33:15] 2026-01-10 00:33:14,847 | INFO     | PID=1024110 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 19:33:15] 2026-01-10 00:33:14,847 | INFO     | .. there are 25 such processes running
[2026-01-09 19:33:15] 2026-01-10 00:33:14,847 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 19:33:15] 2026-01-10 00:33:14,848 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 19:33:15] 2026-01-10 00:33:14,848 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 19:33:15] 2026-01-10 00:33:14,848 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 19:33:15] 2026-01-10 00:33:14,848 | INFO     | [monitor] control thread has ended
[2026-01-09 19:33:15] 2026-01-10 00:33:15,129 [wrapper] ==== pilot stdout END ====
[2026-01-09 19:33:15] 2026-01-10 00:33:15,152 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 19:33:15] 2026-01-10 00:33:15,176 [wrapper] pilotpid: 1024110
[2026-01-09 19:33:15] 2026-01-10 00:33:15,178 [wrapper] Pilot exit status: 0
[2026-01-09 19:33:15] 2026-01-10 00:33:15,190 [wrapper] pandaids: 6963161645
[2026-01-09 19:33:15] 2026-01-10 00:33:15,382 [wrapper] cleanup supervisor_pilot 3297157 1024111
[2026-01-09 19:33:15] 2026-01-10 00:33:15,409 [wrapper] Test setup, not cleaning
[2026-01-09 19:33:15] 2026-01-10 00:33:15,426 [wrapper] apfmon messages muted
[2026-01-09 19:33:15] 2026-01-10 00:33:15,455 [wrapper] ==== wrapper stdout END ====
[2026-01-09 19:33:15] 2026-01-10 00:33:15,474 [wrapper] ==== wrapper stderr END ====
[2026-01-09 19:33:15]  *** Error codes and diagnostics ***
[2026-01-09 19:33:15]     "exeErrorCode": 0,
[2026-01-09 19:33:15]     "exeErrorDiag": "",
[2026-01-09 19:33:15]     "pilotErrorCode": 0,
[2026-01-09 19:33:15]     "pilotErrorDiag": "",
[2026-01-09 19:33:15]  *** Listing of results directory ***
[2026-01-09 19:33:15] total 444380
[2026-01-09 19:33:15] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 16:44 pilot3.tar.gz
[2026-01-09 19:33:15] -rwx------. 1 boincer umatlas     36322 Jan  8 16:49 runpilot2-wrapper.sh
[2026-01-09 19:33:15] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 16:51 queuedata.json
[2026-01-09 19:33:15] -rw-r--r--. 1 boincer umatlas       100 Jan  9 10:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 19:33:15] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 10:31 run_atlas
[2026-01-09 19:33:15] -rw-r--r--. 1 boincer umatlas       105 Jan  9 10:31 job.xml
[2026-01-09 19:33:15] -rw-r--r--. 2 boincer umatlas 222950930 Jan  9 10:31 EVNT.47898824._001288.pool.root.1
[2026-01-09 19:33:15] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 10:31 start_atlas.sh
[2026-01-09 19:33:15] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 10:31 shared
[2026-01-09 19:33:15] -rw-r--r--. 2 boincer umatlas    592402 Jan  9 10:31 input.tar.gz
[2026-01-09 19:33:15] -rw-r--r--. 1 boincer umatlas         0 Jan  9 10:31 boinc_lockfile
[2026-01-09 19:33:15] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 10:31 pandaJob.out
[2026-01-09 19:33:15] -rw-------. 1 boincer umatlas        57 Jan  9 10:31 setup.sh.local
[2026-01-09 19:33:15] -rw-------. 1 boincer umatlas    989377 Jan  9 10:32 agis_schedconf.cvmfs.json
[2026-01-09 19:33:15] drwx------. 5 boincer umatlas      4096 Jan  9 10:32 pilot3
[2026-01-09 19:33:15] -rw-r--r--. 1 boincer umatlas      6958 Jan  9 19:27 init_data.xml
[2026-01-09 19:33:15] -rw-------. 1 boincer umatlas 218368662 Jan  9 19:31 HITS.47898826._033307.pool.root.1
[2026-01-09 19:33:15] -rw-r--r--. 1 boincer umatlas       530 Jan  9 19:31 boinc_task_state.xml
[2026-01-09 19:33:15] -rw-------. 1 boincer umatlas      1045 Jan  9 19:32 memory_monitor_summary.json
[2026-01-09 19:33:15] -rw-------. 1 boincer umatlas   1516240 Jan  9 19:32 agis_ddmendpoints.agis.ALL.json
[2026-01-09 19:33:15] -rw-------. 1 boincer umatlas    709852 Jan  9 19:32 log.47898826._033307.job.log.tgz.1
[2026-01-09 19:33:15] -rw-------. 1 boincer umatlas        95 Jan  9 19:32 pilot_heartbeat.json
[2026-01-09 19:33:15] -rw-------. 1 boincer umatlas      7790 Jan  9 19:32 heartbeat.json
[2026-01-09 19:33:15] -rw-r--r--. 1 boincer umatlas        28 Jan  9 19:32 wrapper_checkpoint.txt
[2026-01-09 19:33:15] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 19:32 boinc_mmap_file
[2026-01-09 19:33:15] -rw-------. 1 boincer umatlas       823 Jan  9 19:33 pilotlog.txt
[2026-01-09 19:33:15] -rw-------. 1 boincer umatlas   4198332 Jan  9 19:33 log.47898826._033307.job.log.1
[2026-01-09 19:33:15] -rw-------. 1 boincer umatlas       357 Jan  9 19:33 output.list
[2026-01-09 19:33:15] -rw-r--r--. 1 boincer umatlas       620 Jan  9 19:33 runtime_log
[2026-01-09 19:33:15] -rw-------. 1 boincer umatlas   4925440 Jan  9 19:33 result.tar.gz
[2026-01-09 19:33:15] -rw-r--r--. 1 boincer umatlas      9343 Jan  9 19:33 runtime_log.err
[2026-01-09 19:33:15] -rw-------. 1 boincer umatlas       662 Jan  9 19:33 IqwNDmY3Cy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmFclKDmy9mI1m.diag
[2026-01-09 19:33:15] -rw-r--r--. 1 boincer umatlas     21415 Jan  9 19:33 stderr.txt
[2026-01-09 19:33:15] HITS file was successfully produced:
[2026-01-09 19:33:15] -rw-------. 1 boincer umatlas 218368662 Jan  9 19:31 shared/HITS.pool.root.1
[2026-01-09 19:33:15]  *** Contents of shared directory: ***
[2026-01-09 19:33:15] total 436392
[2026-01-09 19:33:15] -rw-r--r--. 2 boincer umatlas 222950930 Jan  9 10:31 ATLAS.root_0
[2026-01-09 19:33:15] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 10:31 start_atlas.sh
[2026-01-09 19:33:15] -rw-r--r--. 2 boincer umatlas    592402 Jan  9 10:31 input.tar.gz
[2026-01-09 19:33:15] -rw-------. 1 boincer umatlas 218368662 Jan  9 19:31 HITS.pool.root.1
[2026-01-09 19:33:15] -rw-------. 1 boincer umatlas   4925440 Jan  9 19:33 result.tar.gz
19:33:17 (1019897): run_atlas exited; CPU time 44295.239124
19:33:17 (1019897): called boinc_finish(0)

</stderr_txt>
]]>

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