Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:03:36 (4159698): wrapper (7.7.26015): starting
10:03:36 (4159698): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 10:03:36] Arguments: --nthreads 8
[2026-01-09 10:03:36] Threads: 8
[2026-01-09 10:03:36] Checking for CVMFS
[2026-01-09 10:03:36] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 10:03:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 10:03:37] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 10:03:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 10:03:37] 2.13.3.0 11754 93520 223280 154946 1 396 19091339 32935937 21405 16776704 0 486171928 99.517 637487623 17670 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 10:03:37] CVMFS is ok
[2026-01-09 10:03:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 10:03:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 10:03:37] Further information can be found at the LHC@home message board.
[2026-01-09 10:03:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 10:03:37] Checking for apptainer binary...
[2026-01-09 10:03:37] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 10:03:37] Running /usr/bin/apptainer --version
[2026-01-09 10:03:37] apptainer version 1.4.5-2.el9
[2026-01-09 10:03:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 10:03:38] c7-2-38.aglt2.org
[2026-01-09 10:03:38] apptainer works
[2026-01-09 10:03:38] Set ATHENA_PROC_NUMBER=8
[2026-01-09 10:03:38] Set ATHENA_CORE_NUMBER=8
[2026-01-09 10:03:38] Starting ATLAS job with PandaID=6963161238
[2026-01-09 10:03:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 14:23:54]  *** The last 200 lines of the pilot log: ***
[2026-01-09 14:23:54] 2026-01-09 19:23:07,276 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 14:23:54] 2026-01-09 19:23:07,276 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 14:23:54] 2026-01-09 19:23:07,279 | INFO     | fitting pss+swap vs Time
[2026-01-09 14:23:54] 2026-01-09 19:23:07,280 | INFO     | sum of square deviations: 5021729134.039547
[2026-01-09 14:23:54] 2026-01-09 19:23:07,281 | INFO     | sum of deviations: 43012969152.89722
[2026-01-09 14:23:54] 2026-01-09 19:23:07,281 | INFO     | mean x: 1767978823.56917
[2026-01-09 14:23:54] 2026-01-09 19:23:07,281 | INFO     | mean y: 2513344.3201581025
[2026-01-09 14:23:54] 2026-01-09 19:23:07,281 | INFO     | intersect: -15140879811.96977
[2026-01-09 14:23:54] 2026-01-09 19:23:07,282 | INFO     | chi2: 1.5820332882712393
[2026-01-09 14:23:54] 2026-01-09 19:23:07,282 | INFO     | sum of square deviations: 4729836566.967744
[2026-01-09 14:23:54] 2026-01-09 19:23:07,283 | INFO     | sum of deviations: 41545002015.12904
[2026-01-09 14:23:54] 2026-01-09 19:23:07,283 | INFO     | mean x: 1767978671.064516
[2026-01-09 14:23:54] 2026-01-09 19:23:07,283 | INFO     | mean y: 2512576.3669354836
[2026-01-09 14:23:54] 2026-01-09 19:23:07,283 | INFO     | intersect: -15526708446.838326
[2026-01-09 14:23:54] 2026-01-09 19:23:07,284 | INFO     | chi2: 1.5827462356745143
[2026-01-09 14:23:54] 2026-01-09 19:23:07,284 | INFO     | current chi2=1.5827462356745143 (change=-0.04506525928124172 %)
[2026-01-09 14:23:54] 2026-01-09 19:23:07,284 | INFO     | right removable region: 247
[2026-01-09 14:23:54] 2026-01-09 19:23:07,284 | INFO     | sum of square deviations: 4729809972.38709
[2026-01-09 14:23:54] 2026-01-09 19:23:07,285 | INFO     | sum of deviations: 3717241738.3870945
[2026-01-09 14:23:54] 2026-01-09 19:23:07,285 | INFO     | mean x: 1767978976.080645
[2026-01-09 14:23:54] 2026-01-09 19:23:07,285 | INFO     | mean y: 2533675.830645161
[2026-01-09 14:23:54] 2026-01-09 19:23:07,286 | INFO     | intersect: -1386952430.5553637
[2026-01-09 14:23:54] 2026-01-09 19:23:07,286 | INFO     | chi2: 0.06438508218497273
[2026-01-09 14:23:54] 2026-01-09 19:23:07,286 | INFO     | current chi2=0.06438508218497273 (change=95.9302321473065 %)
[2026-01-09 14:23:54] 2026-01-09 19:23:07,286 | INFO     | sum of square deviations: 4449441160.847772
[2026-01-09 14:23:54] 2026-01-09 19:23:07,287 | INFO     | sum of deviations: 10521958602.596708
[2026-01-09 14:23:54] 2026-01-09 19:23:07,287 | INFO     | mean x: 1767979128.5884774
[2026-01-09 14:23:54] 2026-01-09 19:23:07,288 | INFO     | mean y: 2529945.8559670784
[2026-01-09 14:23:54] 2026-01-09 19:23:07,288 | INFO     | intersect: -4178355367.3276157
[2026-01-09 14:23:54] 2026-01-09 19:23:07,288 | INFO     | chi2: 0.02246160773732547
[2026-01-09 14:23:54] 2026-01-09 19:23:07,288 | INFO     | current chi2=0.02246160773732547 (change=65.1136459330824 %)
[2026-01-09 14:23:54] 2026-01-09 19:23:07,288 | INFO     | sum of square deviations: 4180375008.7773046
[2026-01-09 14:23:54] 2026-01-09 19:23:07,290 | INFO     | sum of deviations: 11272865599.008406
[2026-01-09 14:23:54] 2026-01-09 19:23:07,290 | INFO     | mean x: 1767979281.0966387
[2026-01-09 14:23:54] 2026-01-09 19:23:07,290 | INFO     | mean y: 2529544.2605042015
[2026-01-09 14:23:54] 2026-01-09 19:23:07,290 | INFO     | intersect: -4765031446.2696705
[2026-01-09 14:23:54] 2026-01-09 19:23:07,290 | INFO     | chi2: 0.0017592695664221728
[2026-01-09 14:23:54] 2026-01-09 19:23:07,290 | INFO     | current chi2=0.0017592695664221728 (change=92.16765964842884 %)
[2026-01-09 14:23:54] 2026-01-09 19:23:07,291 | INFO     | sum of square deviations: 3922392861.8798304
[2026-01-09 14:23:54] 2026-01-09 19:23:07,292 | INFO     | sum of deviations: 9897347529.210302
[2026-01-09 14:23:54] 2026-01-09 19:23:07,292 | INFO     | mean x: 1767979433.6008584
[2026-01-09 14:23:54] 2026-01-09 19:23:07,292 | INFO     | mean y: 2530355.948497854
[2026-01-09 14:23:54] 2026-01-09 19:23:07,292 | INFO     | intersect: -4458600258.708474
[2026-01-09 14:23:54] 2026-01-09 19:23:07,292 | INFO     | chi2: 0.0014227703270534263
[2026-01-09 14:23:54] 2026-01-09 19:23:07,293 | INFO     | current chi2=0.0014227703270534263 (change=19.127213122494076 %)
[2026-01-09 14:23:54] 2026-01-09 19:23:07,293 | INFO     | left removable region: 40
[2026-01-09 14:23:54] 2026-01-09 19:23:07,293 | INFO     | sum of square deviations: 2750423145.9130425
[2026-01-09 14:23:54] 2026-01-09 19:23:07,294 | INFO     | sum of deviations: 7136426446.884059
[2026-01-09 14:23:54] 2026-01-09 19:23:07,294 | INFO     | mean x: 1767979860.594203
[2026-01-09 14:23:54] 2026-01-09 19:23:07,294 | INFO     | mean y: 2531091.236714976
[2026-01-09 14:23:54] 2026-01-09 19:23:07,294 | INFO     | intersect: -4584784229.117182
[2026-01-09 14:23:54] 2026-01-09 19:23:07,294 | INFO     | chi2: 0.0012175701026241323
[2026-01-09 14:23:54] 2026-01-09 19:23:07,294 | INFO     | current memory leak: 2.59 B/s (using 207 data points, chi2=0.00)
[2026-01-09 14:23:54] 2026-01-09 19:23:07,295 | INFO     | could have reported an average CPU frequency of 3267 MHz (12 samples)
[2026-01-09 14:23:54] 2026-01-09 19:23:07,295 | INFO     | ..............................
[2026-01-09 14:23:54] 2026-01-09 19:23:07,295 | INFO     | . Timing measurements:
[2026-01-09 14:23:54] 2026-01-09 19:23:07,298 | INFO     | . get job = 0 s
[2026-01-09 14:23:54] 2026-01-09 19:23:07,299 | INFO     | . initial setup = 5 s
[2026-01-09 14:23:54] 2026-01-09 19:23:07,299 | INFO     | . payload setup = 19 s
[2026-01-09 14:23:54] 2026-01-09 19:23:07,299 | INFO     | . stage-in = 0 s
[2026-01-09 14:23:54] 2026-01-09 19:23:07,299 | INFO     | . payload execution = 15442 s
[2026-01-09 14:23:54] 2026-01-09 19:23:07,299 | INFO     | . stage-out = 3 s
[2026-01-09 14:23:54] 2026-01-09 19:23:07,299 | INFO     | . log creation = 0 s
[2026-01-09 14:23:54] 2026-01-09 19:23:07,299 | INFO     | ..............................
[2026-01-09 14:23:54] 2026-01-09 19:23:07,378 | INFO     | 
[2026-01-09 14:23:54] 2026-01-09 19:23:07,379 | INFO     | job summary report
[2026-01-09 14:23:54] 2026-01-09 19:23:07,380 | INFO     | --------------------------------------------------
[2026-01-09 14:23:54] 2026-01-09 19:23:07,380 | INFO     | PanDA job id: 6963161238
[2026-01-09 14:23:54] 2026-01-09 19:23:07,380 | INFO     | task id: 47898826
[2026-01-09 14:23:54] 2026-01-09 19:23:07,380 | INFO     | errors: (none)
[2026-01-09 14:23:54] 2026-01-09 19:23:07,380 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 14:23:54] 2026-01-09 19:23:07,380 | INFO     | pilot state: finished 
[2026-01-09 14:23:54] 2026-01-09 19:23:07,380 | INFO     | transexitcode: 0
[2026-01-09 14:23:54] 2026-01-09 19:23:07,380 | INFO     | exeerrorcode: 0
[2026-01-09 14:23:54] 2026-01-09 19:23:07,380 | INFO     | exeerrordiag: 
[2026-01-09 14:23:54] 2026-01-09 19:23:07,380 | INFO     | exitcode: 0
[2026-01-09 14:23:54] 2026-01-09 19:23:07,380 | INFO     | exitmsg: OK
[2026-01-09 14:23:54] 2026-01-09 19:23:07,380 | INFO     | cpuconsumptiontime: 43074 s
[2026-01-09 14:23:54] 2026-01-09 19:23:07,380 | INFO     | nevents: 400
[2026-01-09 14:23:54] 2026-01-09 19:23:07,380 | INFO     | neventsw: 0
[2026-01-09 14:23:54] 2026-01-09 19:23:07,380 | INFO     | pid: 4191409
[2026-01-09 14:23:54] 2026-01-09 19:23:07,380 | INFO     | pgrp: 4191409
[2026-01-09 14:23:54] 2026-01-09 19:23:07,380 | INFO     | corecount: 8
[2026-01-09 14:23:54] 2026-01-09 19:23:07,381 | INFO     | event service: False
[2026-01-09 14:23:54] 2026-01-09 19:23:07,381 | INFO     | sizes: {0: 2283143, 1: 2283828, 2: 2283999, 3: 2284027, 13: 2284055, 19: 2284373, 24: 2284529, 15465: 2315624, 15466: 2315623, 15471: 2324677, 15474: 2324733, 1548
[2026-01-09 14:23:54] 2026-01-09 19:23:07,381 | INFO     | --------------------------------------------------
[2026-01-09 14:23:54] 2026-01-09 19:23:07,381 | INFO     | 
[2026-01-09 14:23:54] 2026-01-09 19:23:07,381 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-09 14:23:54] 2026-01-09 19:23:07,429 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 14:23:54] 2026-01-09 19:23:07,429 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 14:23:54] 2026-01-09 19:23:07,429 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 14:23:54] 2026-01-09 19:23:07,429 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 14:23:54] 2026-01-09 19:23:07,429 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 14:23:54] 2026-01-09 19:23:07,429 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 14:23:54] 2026-01-09 19:23:07,430 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 14:23:54] 2026-01-09 19:23:07,430 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 14:23:54] 2026-01-09 19:23:07,430 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 14:23:54] 2026-01-09 19:23:07,430 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 14:23:54] 2026-01-09 19:23:07,430 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 14:23:54] 2026-01-09 19:23:07,430 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 14:23:54] 2026-01-09 19:23:07,430 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 14:23:54] 2026-01-09 19:23:07,430 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 14:23:54] 2026-01-09 19:23:07,430 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 14:23:54] 2026-01-09 19:23:07,430 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 14:23:54] 2026-01-09 19:23:07,430 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 14:23:54] 2026-01-09 19:23:07,430 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 14:23:54] 2026-01-09 19:23:07,430 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 14:23:54] 2026-01-09 19:23:07,430 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 14:23:54] 2026-01-09 19:23:07,430 | INFO     | job 6963161238 has completed (purged errors)
[2026-01-09 14:23:54] 2026-01-09 19:23:07,431 | INFO     | overall cleanup function is called
[2026-01-09 14:23:54] 2026-01-09 19:23:08,453 | INFO     | --- collectZombieJob: --- 10, [4191409]
[2026-01-09 14:23:54] 2026-01-09 19:23:08,453 | INFO     | zombie collector waiting for pid 4191409
[2026-01-09 14:23:54] 2026-01-09 19:23:08,454 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 14:23:54] 2026-01-09 19:23:08,454 | INFO     | collected zombie processes
[2026-01-09 14:23:54] 2026-01-09 19:23:08,454 | INFO     | will attempt to kill all subprocesses of pid=4191409
[2026-01-09 14:23:54] 2026-01-09 19:23:10,524 | INFO     | process IDs to be killed: [4191409] (in reverse order)
[2026-01-09 14:23:54] 2026-01-09 19:23:10,868 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 14:23:54] 2026-01-09 19:23:10,868 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 14:23:54] 2026-01-09 19:23:10,910 | INFO     | did not find any defunct processes belonging to 4191409
[2026-01-09 14:23:54] 2026-01-09 19:23:11,025 | INFO     | did not find any defunct processes belonging to 4191409
[2026-01-09 14:23:54] 2026-01-09 19:23:11,026 | INFO     | ready for new job
[2026-01-09 14:23:54] 2026-01-09 19:23:11,026 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 14:23:54] 2026-01-09 19:23:11,029 | INFO     | ***************************************
[2026-01-09 14:23:54] 2026-01-09 19:23:11,029 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 14:23:54] 2026-01-09 19:23:11,029 | INFO     | ***************************************
[2026-01-09 14:23:54] 2026-01-09 19:23:11,029 | INFO     | 
[2026-01-09 14:23:54] 2026-01-09 19:23:11,042 | INFO     | architecture information:
[2026-01-09 14:23:54] 2026-01-09 19:23:11,042 | INFO     | executing command: cat /etc/os-release
[2026-01-09 14:23:54] 2026-01-09 19:23:11,062 | INFO     | cat /etc/os-release:
[2026-01-09 14:23:54] NAME="CentOS Linux"
[2026-01-09 14:23:54] VERSION="7 (Core)"
[2026-01-09 14:23:54] ID="centos"
[2026-01-09 14:23:54] ID_LIKE="rhel fedora"
[2026-01-09 14:23:54] VERSION_ID="7"
[2026-01-09 14:23:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 14:23:54] ANSI_COLOR="0;31"
[2026-01-09 14:23:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 14:23:54] HOME_URL="https://www.centos.org/"
[2026-01-09 14:23:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 14:23:54] 
[2026-01-09 14:23:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 14:23:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 14:23:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 14:23:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 14:23:54] 
[2026-01-09 14:23:54] 2026-01-09 19:23:11,063 | INFO     | ***************************************
[2026-01-09 14:23:54] 2026-01-09 19:23:11,566 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-09 14:23:54] 2026-01-09 19:23:11,619 | INFO     | sufficient remaining disk space (74183606272 B)
[2026-01-09 14:23:54] 2026-01-09 19:23:11,620 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 14:23:54] 2026-01-09 19:23:11,620 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 14:23:54] 2026-01-09 19:23:11,620 | INFO     | update_server=False
[2026-01-09 14:23:54] 2026-01-09 19:23:11,620 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 14:23:54] 2026-01-09 19:23:11,621 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 14:23:54] 2026-01-09 19:23:11,622 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 14:23:54] 2026-01-09 19:23:11,622 | INFO     | aborting loop
[2026-01-09 14:23:54] 2026-01-09 19:23:11,640 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 14:23:54] 2026-01-09 19:23:11,641 | INFO     | all payload control threads have been joined
[2026-01-09 14:23:54] 2026-01-09 19:23:11,752 | INFO     | all data control threads have been joined
[2026-01-09 14:23:54] 2026-01-09 19:23:11,756 | INFO     | all job control threads have been joined
[2026-01-09 14:23:54] 2026-01-09 19:23:12,403 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 14:23:54] 2026-01-09 19:23:12,626 | INFO     | [job] retrieve thread has finished
[2026-01-09 14:23:54] 2026-01-09 19:23:12,631 | INFO     | [job] job monitor thread has finished
[2026-01-09 14:23:54] 2026-01-09 19:23:12,647 | INFO     | [payload] control thread has finished
[2026-01-09 14:23:54] 2026-01-09 19:23:12,759 | INFO     | [data] control thread has finished
[2026-01-09 14:23:54] 2026-01-09 19:23:12,762 | INFO     | [job] control thread has finished
[2026-01-09 14:23:54] 2026-01-09 19:23:12,912 | INFO     | [payload] failed_post thread has finished
[2026-01-09 14:23:54] 2026-01-09 19:23:13,040 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 14:23:54] 2026-01-09 19:23:13,117 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 14:23:54] 2026-01-09 19:23:13,247 | INFO     | [job] validate thread has finished
[2026-01-09 14:23:54] 2026-01-09 19:23:13,409 | INFO     | [job] queue monitor thread has finished
[2026-01-09 14:23:54] 2026-01-09 19:23:13,628 | INFO     | [data] copytool_out thread has finished
[2026-01-09 14:23:54] 2026-01-09 19:23:13,934 | INFO     | [payload] validate_post thread has finished
[2026-01-09 14:23:54] 2026-01-09 19:23:14,004 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 14:23:54] 2026-01-09 19:23:14,105 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 14:23:54] 2026-01-09 19:23:14,109 | INFO     | [data] copytool_in thread has finished
[2026-01-09 14:23:54] 2026-01-09 19:23:15,649 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 14:23:54] 2026-01-09 19:23:37,638 | INFO     | 15532s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-09 14:23:54] 2026-01-09 19:23:41,955 | INFO     | PID=4168761 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 14:23:54] 2026-01-09 19:23:41,955 | INFO     | .. there are 27 such processes running
[2026-01-09 14:23:54] 2026-01-09 19:23:41,956 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 14:23:54] 2026-01-09 19:23:41,956 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 14:23:54] 2026-01-09 19:23:41,968 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 14:23:54] 2026-01-09 19:23:46,850 | INFO     | [monitor] cgroup control has ended
[2026-01-09 14:23:54] 2026-01-09 19:23:47,408 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139805492987712)>', '<ExcThread(monitor, started 139805010687744)>']
[2026-01-09 14:23:54] 2026-01-09 19:23:48,004 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 14:23:54] 2026-01-09 19:23:48,004 | INFO     | [monitor] control thread has ended
[2026-01-09 14:23:54] 2026-01-09 19:23:52,451 | INFO     | all workflow threads have been joined
[2026-01-09 14:23:54] 2026-01-09 19:23:52,454 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 14:23:54] 2026-01-09 19:23:52,454 | INFO     | traces error code: 0
[2026-01-09 14:23:54] 2026-01-09 19:23:52,454 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 14:23:54] 2026-01-09 19:23:53,979 [wrapper] ==== pilot stdout END ====
[2026-01-09 14:23:54] 2026-01-09 19:23:53,997 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 14:23:54] 2026-01-09 19:23:54,012 [wrapper] pilotpid: 4168761
[2026-01-09 14:23:54] 2026-01-09 19:23:54,031 [wrapper] Pilot exit status: 0
[2026-01-09 14:23:54] 2026-01-09 19:23:54,265 [wrapper] pandaids: 6963161238
[2026-01-09 14:23:54] 2026-01-09 19:23:54,744 [wrapper] cleanup supervisor_pilot 1521849 4168762
[2026-01-09 14:23:54] 2026-01-09 19:23:54,752 [wrapper] Test setup, not cleaning
[2026-01-09 14:23:54] 2026-01-09 19:23:54,759 [wrapper] apfmon messages muted
[2026-01-09 14:23:54] 2026-01-09 19:23:54,761 [wrapper] ==== wrapper stdout END ====
[2026-01-09 14:23:54] 2026-01-09 19:23:54,763 [wrapper] ==== wrapper stderr END ====
[2026-01-09 14:23:54]  *** Error codes and diagnostics ***
[2026-01-09 14:23:54]     "exeErrorCode": 0,
[2026-01-09 14:23:54]     "exeErrorDiag": "",
[2026-01-09 14:23:54]     "pilotErrorCode": 0,
[2026-01-09 14:23:54]     "pilotErrorDiag": "",
[2026-01-09 14:23:54]  *** Listing of results directory ***
[2026-01-09 14:23:54] total 443256
[2026-01-09 14:23:54] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 16:44 pilot3.tar.gz
[2026-01-09 14:23:54] -rwx------. 1 boincer umatlas     36322 Jan  8 16:49 runpilot2-wrapper.sh
[2026-01-09 14:23:54] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 16:51 queuedata.json
[2026-01-09 14:23:54] -rw-r--r--. 1 boincer umatlas       100 Jan  9 10:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 14:23:54] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 10:03 run_atlas
[2026-01-09 14:23:54] -rw-r--r--. 1 boincer umatlas       105 Jan  9 10:03 job.xml
[2026-01-09 14:23:54] -rw-r--r--. 2 boincer umatlas 223144853 Jan  9 10:03 EVNT.47898824._001273.pool.root.1
[2026-01-09 14:23:54] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 10:03 start_atlas.sh
[2026-01-09 14:23:54] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 10:03 shared
[2026-01-09 14:23:54] -rw-r--r--. 2 boincer umatlas    592400 Jan  9 10:03 input.tar.gz
[2026-01-09 14:23:54] -rw-r--r--. 1 boincer umatlas         0 Jan  9 10:03 boinc_lockfile
[2026-01-09 14:23:54] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 10:03 pandaJob.out
[2026-01-09 14:23:54] -rw-------. 1 boincer umatlas        57 Jan  9 10:03 setup.sh.local
[2026-01-09 14:23:54] -rw-------. 1 boincer umatlas    989377 Jan  9 10:04 agis_schedconf.cvmfs.json
[2026-01-09 14:23:54] drwx------. 5 boincer umatlas      4096 Jan  9 10:04 pilot3
[2026-01-09 14:23:54] -rw-r--r--. 1 boincer umatlas      6945 Jan  9 14:19 init_data.xml
[2026-01-09 14:23:54] -rw-------. 1 boincer umatlas 221915734 Jan  9 14:22 HITS.47898826._032947.pool.root.1
[2026-01-09 14:23:54] -rw-r--r--. 1 boincer umatlas       530 Jan  9 14:22 boinc_task_state.xml
[2026-01-09 14:23:54] -rw-------. 1 boincer umatlas      1046 Jan  9 14:22 memory_monitor_summary.json
[2026-01-09 14:23:54] -rw-------. 1 boincer umatlas   1516240 Jan  9 14:22 agis_ddmendpoints.agis.ALL.json
[2026-01-09 14:23:54] -rw-------. 1 boincer umatlas    484821 Jan  9 14:22 log.47898826._032947.job.log.tgz.1
[2026-01-09 14:23:54] -rw-------. 1 boincer umatlas      7779 Jan  9 14:23 heartbeat.json
[2026-01-09 14:23:54] -rw-------. 1 boincer umatlas        95 Jan  9 14:23 pilot_heartbeat.json
[2026-01-09 14:23:54] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 14:23 boinc_mmap_file
[2026-01-09 14:23:54] -rw-r--r--. 1 boincer umatlas        28 Jan  9 14:23 wrapper_checkpoint.txt
[2026-01-09 14:23:54] -rw-------. 1 boincer umatlas      4940 Jan  9 14:23 pilotlog.txt
[2026-01-09 14:23:54] -rw-------. 1 boincer umatlas   1974410 Jan  9 14:23 log.47898826._032947.job.log.1
[2026-01-09 14:23:54] -rw-------. 1 boincer umatlas       357 Jan  9 14:23 output.list
[2026-01-09 14:23:54] -rw-r--r--. 1 boincer umatlas       620 Jan  9 14:23 runtime_log
[2026-01-09 14:23:54] -rw-------. 1 boincer umatlas   2478080 Jan  9 14:23 result.tar.gz
[2026-01-09 14:23:54] -rw-r--r--. 1 boincer umatlas      9338 Jan  9 14:23 runtime_log.err
[2026-01-09 14:23:54] -rw-------. 1 boincer umatlas       655 Jan  9 14:23 BAZNDmX3Cy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm6NgKDmbt8uNo.diag
[2026-01-09 14:23:54] -rw-r--r--. 1 boincer umatlas     21106 Jan  9 14:23 stderr.txt
[2026-01-09 14:23:54] HITS file was successfully produced:
[2026-01-09 14:23:54] -rw-------. 1 boincer umatlas 221915734 Jan  9 14:22 shared/HITS.pool.root.1
[2026-01-09 14:23:54]  *** Contents of shared directory: ***
[2026-01-09 14:23:54] total 437652
[2026-01-09 14:23:54] -rw-r--r--. 2 boincer umatlas 223144853 Jan  9 10:03 ATLAS.root_0
[2026-01-09 14:23:54] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 10:03 start_atlas.sh
[2026-01-09 14:23:54] -rw-r--r--. 2 boincer umatlas    592400 Jan  9 10:03 input.tar.gz
[2026-01-09 14:23:54] -rw-------. 1 boincer umatlas 221915734 Jan  9 14:22 HITS.pool.root.1
[2026-01-09 14:23:54] -rw-------. 1 boincer umatlas   2478080 Jan  9 14:23 result.tar.gz
14:23:56 (4159698): run_atlas exited; CPU time 43679.985547
14:23:56 (4159698): called boinc_finish(0)

</stderr_txt>
]]>

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