Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-09 07:17:24 (7668): vboxwrapper version 26210
2026-01-09 07:17:24 (7668): BOINC client version: 8.2.8
2026-01-09 07:17:24 (7668): Detected: VirtualBox VboxManage Interface (Version: 7.2.4)
2026-01-09 07:17:24 (7668): Successfully copied 'init_data.xml' to the shared directory.
2026-01-09 07:17:25 (7668): Create VM. (boinc_38c803a5320d8330, slot#7)
2026-01-09 07:17:25 (7668): Setting Memory Size for VM. (4400MB)
2026-01-09 07:17:26 (7668): Setting CPU Count for VM. (4)
2026-01-09 07:17:26 (7668): Setting Chipset Options for VM.
2026-01-09 07:17:26 (7668): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-09 07:17:26 (7668): Setting Boot Options for VM.
2026-01-09 07:17:27 (7668): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-09 07:17:27 (7668): Enabling VM Network Access.
2026-01-09 07:17:27 (7668): Disabling USB Support for VM.
2026-01-09 07:17:28 (7668): Disabling COM Port Support for VM.
2026-01-09 07:17:28 (7668): Disabling LPT Port Support for VM.
2026-01-09 07:17:28 (7668): Disabling Audio Support for VM.
2026-01-09 07:17:28 (7668): Disabling Clipboard Support for VM.
2026-01-09 07:17:29 (7668): Disabling Drag and Drop Support for VM.
2026-01-09 07:17:29 (7668): Adding storage controller(s) to VM.
2026-01-09 07:17:29 (7668): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-09 07:17:30 (7668): Adding VirtualBox Guest Additions to VM.
2026-01-09 07:17:30 (7668): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-09 07:17:30 (7668): forwarding host port 56907 to guest port 80
2026-01-09 07:17:30 (7668): Enabling remote desktop for VM.
2026-01-09 07:17:31 (7668): Required extension pack not installed, remote desktop not enabled.
2026-01-09 07:17:31 (7668): Enabling shared directory for VM.
2026-01-09 07:17:31 (7668): Starting VM using VBoxManage interface. (boinc_38c803a5320d8330, slot#7)
2026-01-09 07:17:37 (7668): Successfully started VM. (PID = '10460')
2026-01-09 07:17:37 (7668): Reporting VM Process ID to BOINC.
2026-01-09 07:17:37 (7668): Guest Log: BIOS: VirtualBox 7.2.4
2026-01-09 07:17:37 (7668): Guest Log: CPUID EDX: 0x178bfbff
2026-01-09 07:17:37 (7668): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-09 07:17:37 (7668): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-09 07:17:37 (7668): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-09 07:17:37 (7668): Detected: Web Application Enabled (http://localhost:56907)
2026-01-09 07:17:37 (7668): Preference change detected
2026-01-09 07:17:37 (7668): Setting CPU throttle for VM. (100%)
2026-01-09 07:17:38 (7668): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-09 07:17:39 (7668): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-09 07:17:39 (7668): Guest Log: BIOS: Booting from Hard Disk...
2026-01-09 07:17:42 (7668): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-09 07:17:42 (7668): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-09 07:17:42 (7668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-09 07:17:42 (7668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-09 07:17:42 (7668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-09 07:17:42 (7668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-09 07:17:42 (7668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-09 07:17:42 (7668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-09 07:17:42 (7668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-09 07:17:42 (7668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-09 07:17:42 (7668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-09 07:17:42 (7668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-09 07:17:42 (7668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-09 07:17:42 (7668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-09 07:17:42 (7668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-09 07:17:42 (7668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-09 07:17:42 (7668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-09 07:17:42 (7668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-09 07:17:42 (7668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-09 07:17:42 (7668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-09 07:17:42 (7668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-09 07:17:42 (7668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-09 07:17:42 (7668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-09 07:17:42 (7668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-09 07:17:42 (7668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-09 07:17:42 (7668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-09 07:17:42 (7668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-09 07:17:42 (7668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-09 07:17:42 (7668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-09 07:17:42 (7668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-09 07:17:42 (7668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-09 07:17:42 (7668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-09 07:17:49 (7668): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-09 07:17:49 (7668): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-09 07:17:56 (7668): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-09 07:17:56 (7668): Guest Log: 00:00:00.000178 main     Log opened 2026-01-09T07:17:54.411650000Z
2026-01-09 07:17:56 (7668): Guest Log: 00:00:00.000302 main     OS Product: Linux
2026-01-09 07:17:56 (7668): Guest Log: 00:00:00.000344 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-09 07:17:56 (7668): Guest Log: 00:00:00.000377 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-09 07:17:56 (7668): Guest Log: 00:00:00.000411 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-09 07:17:56 (7668): Guest Log: 00:00:00.000412 main     Process ID: 1306
2026-01-09 07:17:56 (7668): Guest Log: 00:00:00.000413 main     Package type: LINUX_64BITS_GENERIC
2026-01-09 07:17:56 (7668): Guest Log: 00:00:00.001323 main     5.2.32 r132073 started. Verbose level = 0
2026-01-09 07:17:56 (7668): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-09 07:17:56 (7668): Guest Log: [INFO] Mounting shared directory
2026-01-09 07:17:56 (7668): Guest Log: [INFO] Checking for init_data.xml
2026-01-09 07:18:01 (7668): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-09 07:18:01 (7668): Guest Log: [INFO] Detected branch: prod
2026-01-09 07:18:01 (7668): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-09 07:18:01 (7668): Guest Log: Copying input files
2026-01-09 07:18:02 (7668): Guest Log: Copied input files into RunAtlas.
2026-01-09 07:18:03 (7668): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-09 07:18:03 (7668): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-09 07:18:03 (7668): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-09 07:18:03 (7668): Guest Log: Further information can be found at the LHC@home message board.
2026-01-09 07:18:06 (7668): Guest Log: 00:00:10.003480 timesync vgsvcTimeSyncWorker: Radical guest time change: 21 612 201 109 000ns (GuestNow=1 767 964 686 615 509 000 ns GuestLast=1 767 943 074 414 400 000 ns fSetTimeLastLoop=true )
2026-01-09 07:18:12 (7668): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-09 07:18:12 (7668): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-09 07:18:12 (7668): Guest Log: 2.6.3.0 1583 0 32204 154945 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-01-09 07:18:13 (7668): Guest Log: copied the webapp to /var/www
2026-01-09 07:18:13 (7668): Guest Log: ATHENA_PROC_NUMBER=4
2026-01-09 07:18:13 (7668): Guest Log: ATHENA_CORE_NUMBER=4
2026-01-09 07:18:13 (7668): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-09 07:18:13 (7668): Guest Log:  *** Starting ATLAS job. (PandaID=6963161324 taskID=47898826) ***
2026-01-09 08:57:40 (7668): Status Report: Elapsed Time: '6000.000000'
2026-01-09 08:57:40 (7668): Status Report: CPU Time: '21986.656250'
2026-01-09 10:37:43 (7668): Status Report: Elapsed Time: '12000.000000'
2026-01-09 10:37:43 (7668): Status Report: CPU Time: '45792.562500'
2026-01-09 11:25:49 (7668): Guest Log:  *** Job finished ***
2026-01-09 11:25:49 (7668): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-09 11:25:49 (7668): Guest Log: 2026-01-09 17:25:16,981 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2026-01-09 11:25:49 (7668): Guest Log: 2026-01-09 17:25:21,019 | INFO     | [data] queue_monitor thread has finished
2026-01-09 11:25:49 (7668): Guest Log: 2026-01-09 17:25:36,264 | INFO     | [monitor] cgroup control has ended
2026-01-09 11:25:49 (7668): Guest Log: 2026-01-09 17:25:37,192 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139963993380672)>', '<ExcThread(monitor, started 139963538577152)>']
2026-01-09 11:25:49 (7668): Guest Log: 2026-01-09 17:25:37,539 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-09 11:25:49 (7668): Guest Log: 2026-01-09 17:25:37,539 | INFO     | [monitor] control thread has ended
2026-01-09 11:25:49 (7668): Guest Log: 2026-01-09 17:25:42,195 | INFO     | all workflow threads have been joined
2026-01-09 11:25:49 (7668): Guest Log: 2026-01-09 17:25:42,195 | INFO     | end of generic workflow (traces error code: 0)
2026-01-09 11:25:49 (7668): Guest Log: 2026-01-09 17:25:42,195 | INFO     | traces error code: 0
2026-01-09 11:25:49 (7668): Guest Log: 2026-01-09 17:25:42,195 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-09 11:25:49 (7668): Guest Log: 2026-01-09 17:25:42,287 [wrapper] ==== pilot stdout END ====
2026-01-09 11:25:49 (7668): Guest Log: 2026-01-09 17:25:42,293 [wrapper] ==== wrapper stdout RESUME ====
2026-01-09 11:25:49 (7668): Guest Log: 2026-01-09 17:25:42,298 [wrapper] pilotpid: 5986
2026-01-09 11:25:49 (7668): Guest Log: 2026-01-09 17:25:42,304 [wrapper] Pilot exit status: 0
2026-01-09 11:25:49 (7668): Guest Log: 2026-01-09 17:25:42,415 [wrapper] pandaids: 6963161324
2026-01-09 11:25:49 (7668): Guest Log: 2026-01-09 17:25:42,449 [wrapper] cleanup supervisor_pilot 16806 5987
2026-01-09 11:25:49 (7668): Guest Log: 2026-01-09 17:25:42,454 [wrapper] Test setup, not cleaning
2026-01-09 11:25:49 (7668): Guest Log: 2026-01-09 17:25:42,459 [wrapper] apfmon messages muted
2026-01-09 11:25:49 (7668): Guest Log: 2026-01-09 17:25:42,465 [wrapper] ==== wrapper stdout END ====
2026-01-09 11:25:49 (7668): Guest Log: 2026-01-09 17:25:42,470 [wrapper] ==== wrapper stderr END ====
2026-01-09 11:25:49 (7668): Guest Log:  *** Error codes and diagnostics ***
2026-01-09 11:25:49 (7668): Guest Log:     "exeErrorCode": 0,
2026-01-09 11:25:49 (7668): Guest Log:     "exeErrorDiag": "",
2026-01-09 11:25:49 (7668): Guest Log:     "pilotErrorCode": 0,
2026-01-09 11:25:49 (7668): Guest Log:     "pilotErrorDiag": "",
2026-01-09 11:25:49 (7668): Guest Log:  *** Listing of results directory ***
2026-01-09 11:25:49 (7668): Guest Log: total 226884
2026-01-09 11:25:49 (7668): Guest Log: -rw-r--r--. 1 atlas atlas    579449 Jan  8 21:44 pilot3.tar.gz
2026-01-09 11:25:49 (7668): Guest Log: -rwx------. 1 atlas atlas     36322 Jan  8 21:49 runpilot2-wrapper.sh
2026-01-09 11:25:49 (7668): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jan  8 21:51 queuedata.json
2026-01-09 11:25:49 (7668): Guest Log: -rwxr-xr-x. 1 atlas atlas      8683 Jan  9 13:18 init_data.xml
2026-01-09 11:25:49 (7668): Guest Log: -rwxr-xr-x. 1 atlas atlas    592404 Jan  9 13:18 input.tar.gz
2026-01-09 11:25:49 (7668): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Jan  9 13:18 start_atlas.sh
2026-01-09 11:25:49 (7668): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan  9 13:18 EVNT.47898824._001277.pool.root.1 -> /data/./ATLAS.root_0
2026-01-09 11:25:49 (7668): Guest Log: -rw-r--r--. 1 atlas atlas      2520 Jan  9 13:18 pandaJob.out
2026-01-09 11:25:49 (7668): Guest Log: -rw-------. 1 atlas atlas    989377 Jan  9 13:19 agis_schedconf.cvmfs.json
2026-01-09 11:25:49 (7668): Guest Log: drwx------. 5 atlas atlas      4096 Jan  9 13:19 pilot3
2026-01-09 11:25:49 (7668): Guest Log: -rw-------. 1 atlas atlas 223747210 Jan  9 17:24 HITS.47898826._033033.pool.root.1
2026-01-09 11:25:49 (7668): Guest Log: -rw-------. 1 atlas atlas      1030 Jan  9 17:24 memory_monitor_summary.json
2026-01-09 11:25:49 (7668): Guest Log: -rw-------. 1 atlas atlas        95 Jan  9 17:24 pilot_heartbeat.json
2026-01-09 11:25:49 (7668): Guest Log: -rw-------. 1 atlas atlas   1516240 Jan  9 17:24 agis_ddmendpoints.agis.ALL.json
2026-01-09 11:25:49 (7668): Guest Log: -rw-------. 1 atlas atlas    397770 Jan  9 17:24 log.47898826._033033.job.log.tgz.1
2026-01-09 11:25:49 (7668): Guest Log: -rw-------. 1 atlas atlas      7798 Jan  9 17:25 heartbeat.json
2026-01-09 11:25:49 (7668): Guest Log: -rw-------. 1 atlas atlas      4612 Jan  9 17:25 pilotlog.txt
2026-01-09 11:25:49 (7668): Guest Log: -rw-------. 1 atlas atlas   1972297 Jan  9 17:25 log.47898826._033033.job.log.1
2026-01-09 11:25:49 (7668): Guest Log: -rw-------. 1 atlas atlas       357 Jan  9 17:25 output.list
2026-01-09 11:25:49 (7668): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan  9 17:25 runtime_log
2026-01-09 11:25:49 (7668): Guest Log: -rw-------. 1 atlas atlas   2385920 Jan  9 17:25 result.tar.gz
2026-01-09 11:25:49 (7668): Guest Log: -rw-------. 1 atlas atlas       661 Jan  9 17:25 VQJODmX3Cy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmSOgKDmlMc1Xn.diag
2026-01-09 11:25:49 (7668): Guest Log: -rw-r--r--. 1 atlas atlas      8759 Jan  9 17:25 runtime_log.err
2026-01-09 11:25:49 (7668): Guest Log: Looking for outputfile HITS.47898826._033033.pool.root.1
2026-01-09 11:25:49 (7668): Guest Log: HITS file was successfully produced
2026-01-09 11:25:49 (7668): Guest Log: -rw-------. 1 atlas atlas 223747210 Jan  9 17:24 /home/atlas/RunAtlas/HITS.47898826._033033.pool.root.1
2026-01-09 11:25:50 (7668): Guest Log: Successfully finished the ATLAS job!
2026-01-09 11:25:50 (7668): Guest Log: Copying the results back to the shared directory!
2026-01-09 11:25:51 (7668): Guest Log:  *** Contents of shared directory: ***
2026-01-09 11:25:51 (7668): Guest Log: total 443948
2026-01-09 11:25:51 (7668): Guest Log: -rwxrwxrwx. 1 root root 227841450 Jan  9 13:17 ATLAS.root_0
2026-01-09 11:25:51 (7668): Guest Log: -rwxrwxrwx. 1 root root 223747210 Jan  9  2026 HITS.pool.root.1
2026-01-09 11:25:51 (7668): Guest Log: -rwxrwxrwx. 1 root root      8683 Jan  9 13:17 init_data.xml
2026-01-09 11:25:51 (7668): Guest Log: -rwxrwxrwx. 1 root root    592404 Jan  9 13:10 input.tar.gz
2026-01-09 11:25:51 (7668): Guest Log: -rwxrwxrwx. 1 root root   2385920 Jan  9  2026 result.tar.gz
2026-01-09 11:25:51 (7668): Guest Log: -rwxrwxrwx. 1 root root     15847 Jan  9 13:10 start_atlas.sh
2026-01-09 11:25:51 (7668): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-09 11:25:51 (7668): VM Completion File Detected.
2026-01-09 11:25:51 (7668): Powering off VM.
2026-01-09 11:25:52 (7668): Successfully stopped VM.
2026-01-09 11:25:52 (7668): Deregistering VM. (boinc_38c803a5320d8330, slot#7)
2026-01-09 11:25:52 (7668): Removing network bandwidth throttle group from VM.
2026-01-09 11:25:52 (7668): Removing VM from VirtualBox.
2026-01-09 11:25:58 (7668): called boinc_finish(0)

</stderr_txt>
]]>

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