Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:01:55 (2360040): wrapper (7.7.26015): starting
08:01:55 (2360040): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 08:01:55] Arguments: --nthreads 8
[2026-01-09 08:01:55] Threads: 8
[2026-01-09 08:01:55] Checking for CVMFS
[2026-01-09 08:01:55] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 08:01:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 08:01:55] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 08:01:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 08:01:55] 2.13.3.0 12497 93308 233752 154944 3 533 26615594 32935937 24556 16776704 0 489565668 99.477 678256629 37878 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 08:01:55] CVMFS is ok
[2026-01-09 08:01:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 08:01:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 08:01:55] Further information can be found at the LHC@home message board.
[2026-01-09 08:01:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 08:01:55] Checking for apptainer binary...
[2026-01-09 08:01:55] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 08:01:55] Running /usr/bin/apptainer --version
[2026-01-09 08:01:55] apptainer version 1.4.5-2.el9
[2026-01-09 08:01:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 08:01:55] c7-7-35.aglt2.org
[2026-01-09 08:01:55] apptainer works
[2026-01-09 08:01:55] Set ATHENA_PROC_NUMBER=8
[2026-01-09 08:01:55] Set ATHENA_CORE_NUMBER=8
[2026-01-09 08:01:55] Starting ATLAS job with PandaID=6963161270
[2026-01-09 08:01:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 14:12:58]  *** The last 200 lines of the pilot log: ***
[2026-01-09 14:12:58] 2026-01-09 19:12:04,711 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 14:12:58] 2026-01-09 19:12:05,536 | INFO     | time since job start (22190s) is within the limit (349056.0s)
[2026-01-09 14:12:58] 2026-01-09 19:12:07,219 | INFO     | monitor loop #1464: job 0:6963161270 is in state 'finished'
[2026-01-09 14:12:58] 2026-01-09 19:12:07,219 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 14:12:58] 2026-01-09 19:12:07,543 | INFO     | time since job start (22192s) is within the limit (349056.0s)
[2026-01-09 14:12:58] 2026-01-09 19:12:08,701 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 14:12:58] 2026-01-09 19:12:08,707 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3118.888458333331
[2026-01-09 14:12:58] 2026-01-09 19:12:08,767 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6963161270/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 14:12:58] 2026-01-09 19:12:08,768 | INFO     | extracted standard info from prmon json
[2026-01-09 14:12:58] 2026-01-09 19:12:08,768 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 14:12:58] 2026-01-09 19:12:08,768 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 14:12:58] 2026-01-09 19:12:08,769 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 14:12:58] 2026-01-09 19:12:08,769 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 14:12:58] 2026-01-09 19:12:08,778 | INFO     | fitting pss+swap vs Time
[2026-01-09 14:12:58] 2026-01-09 19:12:08,783 | INFO     | sum of square deviations: 14832192993.906378
[2026-01-09 14:12:58] 2026-01-09 19:12:08,786 | INFO     | sum of deviations: 62741263946.87049
[2026-01-09 14:12:58] 2026-01-09 19:12:08,786 | INFO     | mean x: 1767974811.1184573
[2026-01-09 14:12:58] 2026-01-09 19:12:08,786 | INFO     | mean y: 2506759.8402203857
[2026-01-09 14:12:58] 2026-01-09 19:12:08,786 | INFO     | intersect: -7476156329.3856125
[2026-01-09 14:12:58] 2026-01-09 19:12:08,791 | INFO     | chi2: 1.3461561447672437
[2026-01-09 14:12:58] 2026-01-09 19:12:08,791 | INFO     | sum of square deviations: 14227653925.030754
[2026-01-09 14:12:58] 2026-01-09 19:12:08,794 | INFO     | sum of deviations: 62015629117.88273
[2026-01-09 14:12:58] 2026-01-09 19:12:08,794 | INFO     | mean x: 1767974658.6117318
[2026-01-09 14:12:58] 2026-01-09 19:12:08,794 | INFO     | mean y: 2506577.027932961
[2026-01-09 14:12:58] 2026-01-09 19:12:08,795 | INFO     | intersect: -7703757666.9586935
[2026-01-09 14:12:58] 2026-01-09 19:12:08,799 | INFO     | chi2: 1.3461971274126903
[2026-01-09 14:12:58] 2026-01-09 19:12:08,799 | INFO     | current chi2=1.3461971274126903 (change=-0.0030444198918464895 %)
[2026-01-09 14:12:58] 2026-01-09 19:12:08,799 | INFO     | right removable region: 357
[2026-01-09 14:12:58] 2026-01-09 19:12:08,800 | INFO     | sum of square deviations: 14227694126.335165
[2026-01-09 14:12:58] 2026-01-09 19:12:08,802 | INFO     | sum of deviations: 11792933003.078217
[2026-01-09 14:12:58] 2026-01-09 19:12:08,803 | INFO     | mean x: 1767974963.6201117
[2026-01-09 14:12:58] 2026-01-09 19:12:08,807 | INFO     | mean y: 2519533.0446927375
[2026-01-09 14:12:58] 2026-01-09 19:12:08,807 | INFO     | intersect: -1462904878.8070796
[2026-01-09 14:12:58] 2026-01-09 19:12:08,807 | INFO     | chi2: 0.09363905803427111
[2026-01-09 14:12:58] 2026-01-09 19:12:08,807 | INFO     | current chi2=0.09363905803427111 (change=93.04396756659594 %)
[2026-01-09 14:12:58] 2026-01-09 19:12:08,808 | INFO     | sum of square deviations: 13639846733.762047
[2026-01-09 14:12:58] 2026-01-09 19:12:08,811 | INFO     | sum of deviations: 10664858014.538244
[2026-01-09 14:12:58] 2026-01-09 19:12:08,815 | INFO     | mean x: 1767975116.121813
[2026-01-09 14:12:58] 2026-01-09 19:12:08,815 | INFO     | mean y: 2519819.0339943343
[2026-01-09 14:12:58] 2026-01-09 19:12:08,815 | INFO     | intersect: -1379842017.9215877
[2026-01-09 14:12:58] 2026-01-09 19:12:08,815 | INFO     | chi2: 0.08818027915512279
[2026-01-09 14:12:58] 2026-01-09 19:12:08,816 | INFO     | current chi2=0.08818027915512279 (change=5.829596104171033 %)
[2026-01-09 14:12:58] 2026-01-09 19:12:08,816 | INFO     | left removable region: 20
[2026-01-09 14:12:58] 2026-01-09 19:12:08,816 | INFO     | sum of square deviations: 11867892623.252264
[2026-01-09 14:12:58] 2026-01-09 19:12:08,819 | INFO     | sum of deviations: -677591306.6617217
[2026-01-09 14:12:58] 2026-01-09 19:12:08,823 | INFO     | mean x: 1767975238.1186943
[2026-01-09 14:12:58] 2026-01-09 19:12:08,823 | INFO     | mean y: 2522998.041543027
[2026-01-09 14:12:58] 2026-01-09 19:12:08,823 | INFO     | intersect: 103464647.05809149
[2026-01-09 14:12:58] 2026-01-09 19:12:08,823 | INFO     | chi2: 0.01606721511156324
[2026-01-09 14:12:58] 2026-01-09 19:12:08,824 | INFO     | current memory leak: -0.06 B/s (using 337 data points, chi2=0.02)
[2026-01-09 14:12:58] 2026-01-09 19:12:08,824 | INFO     | could have reported an average CPU frequency of 3169 MHz (16 samples)
[2026-01-09 14:12:58] 2026-01-09 19:12:08,824 | INFO     | ..............................
[2026-01-09 14:12:58] 2026-01-09 19:12:08,824 | INFO     | . Timing measurements:
[2026-01-09 14:12:58] 2026-01-09 19:12:08,825 | INFO     | . get job = 0 s
[2026-01-09 14:12:58] 2026-01-09 19:12:08,825 | INFO     | . initial setup = 3 s
[2026-01-09 14:12:58] 2026-01-09 19:12:08,825 | INFO     | . payload setup = 10 s
[2026-01-09 14:12:58] 2026-01-09 19:12:08,825 | INFO     | . stage-in = 0 s
[2026-01-09 14:12:58] 2026-01-09 19:12:08,825 | INFO     | . payload execution = 22138 s
[2026-01-09 14:12:58] 2026-01-09 19:12:08,825 | INFO     | . stage-out = 4 s
[2026-01-09 14:12:58] 2026-01-09 19:12:08,825 | INFO     | . log creation = 0 s
[2026-01-09 14:12:58] 2026-01-09 19:12:08,825 | INFO     | ..............................
[2026-01-09 14:12:58] 2026-01-09 19:12:09,078 | INFO     | 
[2026-01-09 14:12:58] 2026-01-09 19:12:09,153 | INFO     | job summary report
[2026-01-09 14:12:58] 2026-01-09 19:12:09,153 | INFO     | --------------------------------------------------
[2026-01-09 14:12:58] 2026-01-09 19:12:09,153 | INFO     | PanDA job id: 6963161270
[2026-01-09 14:12:58] 2026-01-09 19:12:09,153 | INFO     | task id: 47898826
[2026-01-09 14:12:58] 2026-01-09 19:12:09,153 | INFO     | errors: (none)
[2026-01-09 14:12:58] 2026-01-09 19:12:09,153 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 14:12:58] 2026-01-09 19:12:09,154 | INFO     | pilot state: finished 
[2026-01-09 14:12:58] 2026-01-09 19:12:09,154 | INFO     | transexitcode: 0
[2026-01-09 14:12:58] 2026-01-09 19:12:09,154 | INFO     | exeerrorcode: 0
[2026-01-09 14:12:58] 2026-01-09 19:12:09,154 | INFO     | exeerrordiag: 
[2026-01-09 14:12:58] 2026-01-09 19:12:09,154 | INFO     | exitcode: 0
[2026-01-09 14:12:58] 2026-01-09 19:12:09,154 | INFO     | exitmsg: OK
[2026-01-09 14:12:58] 2026-01-09 19:12:09,154 | INFO     | cpuconsumptiontime: 45203 s
[2026-01-09 14:12:58] 2026-01-09 19:12:09,154 | INFO     | nevents: 400
[2026-01-09 14:12:58] 2026-01-09 19:12:09,154 | INFO     | neventsw: 0
[2026-01-09 14:12:58] 2026-01-09 19:12:09,154 | INFO     | pid: 2371652
[2026-01-09 14:12:58] 2026-01-09 19:12:09,154 | INFO     | pgrp: 2371652
[2026-01-09 14:12:58] 2026-01-09 19:12:09,154 | INFO     | corecount: 8
[2026-01-09 14:12:58] 2026-01-09 19:12:09,154 | INFO     | event service: False
[2026-01-09 14:12:58] 2026-01-09 19:12:09,154 | INFO     | sizes: {0: 2283800, 1: 2283999, 8: 2284261, 12: 2284289, 22153: 2318975, 22158: 2327973, 22159: 2328157, 22175: 2328351}
[2026-01-09 14:12:58] 2026-01-09 19:12:09,154 | INFO     | --------------------------------------------------
[2026-01-09 14:12:58] 2026-01-09 19:12:09,155 | INFO     | 
[2026-01-09 14:12:58] 2026-01-09 19:12:09,155 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-09 14:12:58] 2026-01-09 19:12:09,551 | INFO     | time since job start (22194s) is within the limit (349056.0s)
[2026-01-09 14:12:58] 2026-01-09 19:12:09,701 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 14:12:58] 2026-01-09 19:12:09,701 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 14:12:58] 2026-01-09 19:12:09,701 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 14:12:58] 2026-01-09 19:12:09,701 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 14:12:58] 2026-01-09 19:12:09,701 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 14:12:58] 2026-01-09 19:12:09,701 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 14:12:58] 2026-01-09 19:12:09,702 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 14:12:58] 2026-01-09 19:12:09,702 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 14:12:58] 2026-01-09 19:12:09,702 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 14:12:58] 2026-01-09 19:12:09,702 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 14:12:58] 2026-01-09 19:12:09,702 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 14:12:58] 2026-01-09 19:12:09,702 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 14:12:58] 2026-01-09 19:12:09,702 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 14:12:58] 2026-01-09 19:12:09,702 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 14:12:58] 2026-01-09 19:12:09,702 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 14:12:58] 2026-01-09 19:12:09,702 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 14:12:58] 2026-01-09 19:12:09,702 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 14:12:58] 2026-01-09 19:12:09,702 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 14:12:58] 2026-01-09 19:12:09,702 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 14:12:58] 2026-01-09 19:12:09,702 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 14:12:58] 2026-01-09 19:12:09,702 | INFO     | job 6963161270 has completed (purged errors)
[2026-01-09 14:12:58] 2026-01-09 19:12:09,703 | INFO     | overall cleanup function is called
[2026-01-09 14:12:58] 2026-01-09 19:12:10,748 | INFO     | --- collectZombieJob: --- 10, [2371652]
[2026-01-09 14:12:58] 2026-01-09 19:12:10,748 | INFO     | zombie collector waiting for pid 2371652
[2026-01-09 14:12:58] 2026-01-09 19:12:10,748 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 14:12:58] 2026-01-09 19:12:10,748 | INFO     | collected zombie processes
[2026-01-09 14:12:58] 2026-01-09 19:12:10,749 | INFO     | will attempt to kill all subprocesses of pid=2371652
[2026-01-09 14:12:58] 2026-01-09 19:12:12,265 | INFO     | PID=2365235 has CPU usage=11.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-09 14:12:58] 2026-01-09 19:12:12,265 | INFO     | .. there are 23 such processes running
[2026-01-09 14:12:58] 2026-01-09 19:12:12,309 | INFO     | process IDs to be killed: [2371652] (in reverse order)
[2026-01-09 14:12:58] 2026-01-09 19:12:12,743 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 14:12:58] 2026-01-09 19:12:12,744 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 14:12:58] 2026-01-09 19:12:12,855 | INFO     | did not find any defunct processes belonging to 2371652
[2026-01-09 14:12:58] 2026-01-09 19:12:12,974 | INFO     | did not find any defunct processes belonging to 2371652
[2026-01-09 14:12:58] 2026-01-09 19:12:12,975 | INFO     | ready for new job
[2026-01-09 14:12:58] 2026-01-09 19:12:12,975 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 14:12:58] 2026-01-09 19:12:13,008 | INFO     | ***************************************
[2026-01-09 14:12:58] 2026-01-09 19:12:13,008 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 14:12:58] 2026-01-09 19:12:13,008 | INFO     | ***************************************
[2026-01-09 14:12:58] 2026-01-09 19:12:13,009 | INFO     | 
[2026-01-09 14:12:58] 2026-01-09 19:12:13,095 | INFO     | architecture information:
[2026-01-09 14:12:58] 2026-01-09 19:12:13,155 | INFO     | executing command: cat /etc/os-release
[2026-01-09 14:12:58] 2026-01-09 19:12:13,373 | INFO     | cat /etc/os-release:
[2026-01-09 14:12:58] NAME="CentOS Linux"
[2026-01-09 14:12:58] VERSION="7 (Core)"
[2026-01-09 14:12:58] ID="centos"
[2026-01-09 14:12:58] ID_LIKE="rhel fedora"
[2026-01-09 14:12:58] VERSION_ID="7"
[2026-01-09 14:12:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 14:12:58] ANSI_COLOR="0;31"
[2026-01-09 14:12:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 14:12:58] HOME_URL="https://www.centos.org/"
[2026-01-09 14:12:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 14:12:58] 
[2026-01-09 14:12:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 14:12:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 14:12:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 14:12:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 14:12:58] 
[2026-01-09 14:12:58] 2026-01-09 19:12:13,373 | INFO     | ***************************************
[2026-01-09 14:12:58] 2026-01-09 19:12:13,877 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-09 14:12:58] 2026-01-09 19:12:14,016 | INFO     | sufficient remaining disk space (73174876160 B)
[2026-01-09 14:12:58] 2026-01-09 19:12:14,016 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 14:12:58] 2026-01-09 19:12:14,017 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 14:12:58] 2026-01-09 19:12:14,017 | INFO     | update_server=False
[2026-01-09 14:12:58] 2026-01-09 19:12:14,017 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 14:12:58] 2026-01-09 19:12:14,024 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 14:12:58] 2026-01-09 19:12:14,025 | INFO     | aborting loop
[2026-01-09 14:12:58] 2026-01-09 19:12:14,072 | INFO     | all data control threads have been joined
[2026-01-09 14:12:58] 2026-01-09 19:12:14,099 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 14:12:58] 2026-01-09 19:12:14,229 | INFO     | all job control threads have been joined
[2026-01-09 14:12:58] 2026-01-09 19:12:14,579 | INFO     | all payload control threads have been joined
[2026-01-09 14:12:58] 2026-01-09 19:12:15,023 | INFO     | [job] retrieve thread has finished
[2026-01-09 14:12:58] 2026-01-09 19:12:15,031 | INFO     | [job] job monitor thread has finished
[2026-01-09 14:12:58] 2026-01-09 19:12:15,078 | INFO     | [data] control thread has finished
[2026-01-09 14:12:58] 2026-01-09 19:12:15,105 | INFO     | [job] queue monitor thread has finished
[2026-01-09 14:12:58] 2026-01-09 19:12:15,235 | INFO     | [job] control thread has finished
[2026-01-09 14:12:58] 2026-01-09 19:12:15,250 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 14:12:58] 2026-01-09 19:12:15,399 | INFO     | [job] validate thread has finished
[2026-01-09 14:12:58] 2026-01-09 19:12:15,407 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 14:12:58] 2026-01-09 19:12:15,472 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 14:12:58] 2026-01-09 19:12:15,550 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 14:12:58] 2026-01-09 19:12:15,563 | INFO     | [data] copytool_in thread has finished
[2026-01-09 14:12:58] 2026-01-09 19:12:15,585 | INFO     | [payload] control thread has finished
[2026-01-09 14:12:58] 2026-01-09 19:12:15,853 | INFO     | [payload] validate_post thread has finished
[2026-01-09 14:12:58] 2026-01-09 19:12:16,576 | INFO     | [payload] failed_post thread has finished
[2026-01-09 14:12:58] 2026-01-09 19:12:16,903 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 14:12:58] 2026-01-09 19:12:17,257 | INFO     | [data] copytool_out thread has finished
[2026-01-09 14:12:58] 2026-01-09 19:12:20,916 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 14:12:58] 2026-01-09 19:12:24,411 | INFO     | job.realtimelogging is not enabled
[2026-01-09 14:12:58] 2026-01-09 19:12:25,417 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 14:12:58] 2026-01-09 19:12:46,034 | INFO     | PID=2365235 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 14:12:58] 2026-01-09 19:12:46,034 | INFO     | .. there are 23 such processes running
[2026-01-09 14:12:58] 2026-01-09 19:12:46,034 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 14:12:58] 2026-01-09 19:12:46,034 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 14:12:58] 2026-01-09 19:12:46,034 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 14:12:58] 2026-01-09 19:12:52,553 | INFO     | [monitor] cgroup control has ended
[2026-01-09 14:12:58] 2026-01-09 19:12:52,588 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140559462938432)>', '<ExcThread(monitor, started 140559190562560)>']
[2026-01-09 14:12:58] 2026-01-09 19:12:53,081 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 14:12:58] 2026-01-09 19:12:53,081 | INFO     | [monitor] control thread has ended
[2026-01-09 14:12:58] 2026-01-09 19:12:57,614 | INFO     | all workflow threads have been joined
[2026-01-09 14:12:58] 2026-01-09 19:12:57,614 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 14:12:58] 2026-01-09 19:12:57,614 | INFO     | traces error code: 0
[2026-01-09 14:12:58] 2026-01-09 19:12:57,615 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 14:12:58] 2026-01-09 19:12:58,018 [wrapper] ==== pilot stdout END ====
[2026-01-09 14:12:58] 2026-01-09 19:12:58,056 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 14:12:58] 2026-01-09 19:12:58,104 [wrapper] pilotpid: 2365235
[2026-01-09 14:12:58] 2026-01-09 19:12:58,120 [wrapper] Pilot exit status: 0
[2026-01-09 14:12:58] 2026-01-09 19:12:58,135 [wrapper] pandaids: 6963161270
[2026-01-09 14:12:58] 2026-01-09 19:12:58,270 [wrapper] cleanup supervisor_pilot 3654244 2365236
[2026-01-09 14:12:58] 2026-01-09 19:12:58,280 [wrapper] Test setup, not cleaning
[2026-01-09 14:12:58] 2026-01-09 19:12:58,328 [wrapper] apfmon messages muted
[2026-01-09 14:12:58] 2026-01-09 19:12:58,342 [wrapper] ==== wrapper stdout END ====
[2026-01-09 14:12:58] 2026-01-09 19:12:58,370 [wrapper] ==== wrapper stderr END ====
[2026-01-09 14:12:58]  *** Error codes and diagnostics ***
[2026-01-09 14:12:58]     "exeErrorCode": 0,
[2026-01-09 14:12:58]     "exeErrorDiag": "",
[2026-01-09 14:12:58]     "pilotErrorCode": 0,
[2026-01-09 14:12:58]     "pilotErrorDiag": "",
[2026-01-09 14:12:58]  *** Listing of results directory ***
[2026-01-09 14:12:58] total 441856
[2026-01-09 14:12:58] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 16:44 pilot3.tar.gz
[2026-01-09 14:12:58] -rwx------. 1 boincer umatlas     36322 Jan  8 16:49 runpilot2-wrapper.sh
[2026-01-09 14:12:58] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 16:51 queuedata.json
[2026-01-09 14:12:58] -rw-r--r--. 1 boincer umatlas       100 Jan  9 08:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 14:12:58] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 08:01 run_atlas
[2026-01-09 14:12:58] -rw-r--r--. 1 boincer umatlas       105 Jan  9 08:01 job.xml
[2026-01-09 14:12:58] -rw-r--r--. 2 boincer umatlas 223563759 Jan  9 08:01 EVNT.47898824._001275.pool.root.1
[2026-01-09 14:12:58] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 08:01 shared
[2026-01-09 14:12:58] -rw-r--r--. 2 boincer umatlas    592402 Jan  9 08:01 input.tar.gz
[2026-01-09 14:12:58] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 08:01 start_atlas.sh
[2026-01-09 14:12:58] -rw-r--r--. 1 boincer umatlas         0 Jan  9 08:01 boinc_lockfile
[2026-01-09 14:12:58] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 08:01 pandaJob.out
[2026-01-09 14:12:58] -rw-------. 1 boincer umatlas        57 Jan  9 08:01 setup.sh.local
[2026-01-09 14:12:58] -rw-------. 1 boincer umatlas    989377 Jan  9 08:02 agis_schedconf.cvmfs.json
[2026-01-09 14:12:58] drwx------. 5 boincer umatlas      4096 Jan  9 08:02 pilot3
[2026-01-09 14:12:58] -rw-r--r--. 1 boincer umatlas      6946 Jan  9 14:09 init_data.xml
[2026-01-09 14:12:58] -rw-------. 1 boincer umatlas 217954089 Jan  9 14:11 HITS.47898826._032979.pool.root.1
[2026-01-09 14:12:58] -rw-r--r--. 1 boincer umatlas       531 Jan  9 14:11 boinc_task_state.xml
[2026-01-09 14:12:58] -rw-------. 1 boincer umatlas      1048 Jan  9 14:11 memory_monitor_summary.json
[2026-01-09 14:12:58] -rw-------. 1 boincer umatlas   1516240 Jan  9 14:11 agis_ddmendpoints.agis.ALL.json
[2026-01-09 14:12:58] -rw-------. 1 boincer umatlas    558862 Jan  9 14:11 log.47898826._032979.job.log.tgz.1
[2026-01-09 14:12:58] -rw-------. 1 boincer umatlas        95 Jan  9 14:12 pilot_heartbeat.json
[2026-01-09 14:12:58] -rw-------. 1 boincer umatlas      7776 Jan  9 14:12 heartbeat.json
[2026-01-09 14:12:58] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 14:12 boinc_mmap_file
[2026-01-09 14:12:58] -rw-r--r--. 1 boincer umatlas        28 Jan  9 14:12 wrapper_checkpoint.txt
[2026-01-09 14:12:58] -rw-------. 1 boincer umatlas      4896 Jan  9 14:12 pilotlog.txt
[2026-01-09 14:12:58] -rw-------. 1 boincer umatlas   2950383 Jan  9 14:12 log.47898826._032979.job.log.1
[2026-01-09 14:12:58] -rw-------. 1 boincer umatlas       357 Jan  9 14:12 output.list
[2026-01-09 14:12:58] -rw-r--r--. 1 boincer umatlas       620 Jan  9 14:12 runtime_log
[2026-01-09 14:12:58] -rw-------. 1 boincer umatlas   3532800 Jan  9 14:12 result.tar.gz
[2026-01-09 14:12:58] -rw-r--r--. 1 boincer umatlas      9338 Jan  9 14:12 runtime_log.err
[2026-01-09 14:12:58] -rw-------. 1 boincer umatlas       656 Jan  9 14:12 KGmNDmX3Cy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmDOgKDmbPmHpn.diag
[2026-01-09 14:12:58] -rw-r--r--. 1 boincer umatlas     21471 Jan  9 14:12 stderr.txt
[2026-01-09 14:12:58] HITS file was successfully produced:
[2026-01-09 14:12:58] -rw-------. 1 boincer umatlas 217954089 Jan  9 14:11 shared/HITS.pool.root.1
[2026-01-09 14:12:58]  *** Contents of shared directory: ***
[2026-01-09 14:12:58] total 435228
[2026-01-09 14:12:58] -rw-r--r--. 2 boincer umatlas 223563759 Jan  9 08:01 ATLAS.root_0
[2026-01-09 14:12:58] -rw-r--r--. 2 boincer umatlas    592402 Jan  9 08:01 input.tar.gz
[2026-01-09 14:12:58] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 08:01 start_atlas.sh
[2026-01-09 14:12:58] -rw-------. 1 boincer umatlas 217954089 Jan  9 14:11 HITS.pool.root.1
[2026-01-09 14:12:58] -rw-------. 1 boincer umatlas   3532800 Jan  9 14:12 result.tar.gz
14:13:00 (2360040): run_atlas exited; CPU time 46116.183142
14:13:00 (2360040): called boinc_finish(0)

</stderr_txt>
]]>

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