Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
11:28:48 (3745434): wrapper (7.7.26015): starting
11:28:48 (3745434): wrapper: running run_atlas (--nthreads 3)
[2026-01-11 11:28:48] Arguments: --nthreads 3
[2026-01-11 11:28:48] Threads: 3
[2026-01-11 11:28:48] Checking for CVMFS
[2026-01-11 11:28:48] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 11:28:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 11:28:48] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 11:28:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 11:28:48] 2.12.7.0 3694947 5462 66220 155013 3 97 5198178 6144001 1763 130560 0 9777464 99.995 205040 1875 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.42:3128 1
[2026-01-11 11:28:48] CVMFS is ok
[2026-01-11 11:28:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 11:28:48] Checking for apptainer binary...
[2026-01-11 11:28:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-11 11:28:48] Running /usr/bin/apptainer --version
[2026-01-11 11:28:48] apptainer version 1.4.5
[2026-01-11 11:28:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 11:28:48] Ryzen8
[2026-01-11 11:28:48] apptainer works
[2026-01-11 11:28:48] Set ATHENA_PROC_NUMBER=3
[2026-01-11 11:28:48] Set ATHENA_CORE_NUMBER=3
[2026-01-11 11:28:48] Starting ATLAS job with PandaID=6963157181
[2026-01-11 11:28:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc2/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 14:07:15]  *** The last 200 lines of the pilot log: ***
[2026-01-11 14:07:15] 2026-01-11 13:06:24,386 | INFO     | using path: /var/lib/boinc2/slots/1/PanDA_Pilot-6963157181/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 14:07:15] 2026-01-11 13:06:24,387 | INFO     | extracted standard info from prmon json
[2026-01-11 14:07:15] 2026-01-11 13:06:24,387 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 14:07:15] 2026-01-11 13:06:24,387 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 14:07:15] 2026-01-11 13:06:24,387 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 14:07:15] 2026-01-11 13:06:24,387 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 14:07:15] 2026-01-11 13:06:24,388 | INFO     | fitting pss+swap vs Time
[2026-01-11 14:07:15] 2026-01-11 13:06:24,389 | INFO     | sum of square deviations: 1154663510.0
[2026-01-11 14:07:15] 2026-01-11 13:06:24,389 | INFO     | sum of deviations: -10474469759.000004
[2026-01-11 14:07:15] 2026-01-11 13:06:24,389 | INFO     | mean x: 1768132050.0
[2026-01-11 14:07:15] 2026-01-11 13:06:24,389 | INFO     | mean y: 2345218.5741935484
[2026-01-11 14:07:15] 2026-01-11 13:06:24,389 | INFO     | intersect: 16041862815.907536
[2026-01-11 14:07:15] 2026-01-11 13:06:24,389 | INFO     | chi2: 1.1315455332615272
[2026-01-11 14:07:15] 2026-01-11 13:06:24,389 | INFO     | sum of square deviations: 1046484737.5
[2026-01-11 14:07:15] 2026-01-11 13:06:24,390 | INFO     | sum of deviations: -10143861318.500002
[2026-01-11 14:07:15] 2026-01-11 13:06:24,390 | INFO     | mean x: 1768131897.5
[2026-01-11 14:07:15] 2026-01-11 13:06:24,390 | INFO     | mean y: 2345684.78
[2026-01-11 14:07:15] 2026-01-11 13:06:24,390 | INFO     | intersect: 17141329291.84504
[2026-01-11 14:07:15] 2026-01-11 13:06:24,390 | INFO     | chi2: 1.1290094242205044
[2026-01-11 14:07:15] 2026-01-11 13:06:24,390 | INFO     | current chi2=1.1290094242205044 (change=0.22412788230560704 %)
[2026-01-11 14:07:15] 2026-01-11 13:06:24,390 | INFO     | right removable region: 149
[2026-01-11 14:07:15] 2026-01-11 13:06:24,390 | INFO     | sum of square deviations: 1046484737.5
[2026-01-11 14:07:15] 2026-01-11 13:06:24,391 | INFO     | sum of deviations: -19322039506.0
[2026-01-11 14:07:15] 2026-01-11 13:06:24,391 | INFO     | mean x: 1768132202.5
[2026-01-11 14:07:15] 2026-01-11 13:06:24,391 | INFO     | mean y: 2357206.3733333335
[2026-01-11 14:07:15] 2026-01-11 13:06:24,391 | INFO     | intersect: 32648719875.886986
[2026-01-11 14:07:15] 2026-01-11 13:06:24,391 | INFO     | chi2: 0.08713597282528389
[2026-01-11 14:07:15] 2026-01-11 13:06:24,391 | INFO     | current chi2=0.08713597282528389 (change=92.29938431429036 %)
[2026-01-11 14:07:15] 2026-01-11 13:06:24,391 | INFO     | sum of square deviations: 945282840.0
[2026-01-11 14:07:15] 2026-01-11 13:06:24,391 | INFO     | sum of deviations: -13377024828.999994
[2026-01-11 14:07:15] 2026-01-11 13:06:24,391 | INFO     | mean x: 1768132355.0
[2026-01-11 14:07:15] 2026-01-11 13:06:24,391 | INFO     | mean y: 2348274.6344827586
[2026-01-11 14:07:15] 2026-01-11 13:06:24,391 | INFO     | intersect: 25023801550.77058
[2026-01-11 14:07:15] 2026-01-11 13:06:24,392 | INFO     | chi2: 0.05044725758120799
[2026-01-11 14:07:15] 2026-01-11 13:06:24,392 | INFO     | current chi2=0.05044725758120799 (change=42.1051306991664 %)
[2026-01-11 14:07:15] 2026-01-11 13:06:24,392 | INFO     | sum of square deviations: 850825255.0
[2026-01-11 14:07:15] 2026-01-11 13:06:24,392 | INFO     | sum of deviations: -11092732880.0
[2026-01-11 14:07:15] 2026-01-11 13:06:24,392 | INFO     | mean x: 1768132507.5
[2026-01-11 14:07:15] 2026-01-11 13:06:24,392 | INFO     | mean y: 2344582.7285714285
[2026-01-11 14:07:15] 2026-01-11 13:06:24,392 | INFO     | intersect: 23054577090.967995
[2026-01-11 14:07:15] 2026-01-11 13:06:24,392 | INFO     | chi2: 0.04864089459341158
[2026-01-11 14:07:15] 2026-01-11 13:06:24,392 | INFO     | current chi2=0.04864089459341158 (change=3.5806961060045626 %)
[2026-01-11 14:07:15] 2026-01-11 13:06:24,392 | INFO     | left removable region: 30
[2026-01-11 14:07:15] 2026-01-11 13:06:24,392 | INFO     | sum of square deviations: 522502820.0
[2026-01-11 14:07:15] 2026-01-11 13:06:24,393 | INFO     | sum of deviations: -3758866482.000001
[2026-01-11 14:07:15] 2026-01-11 13:06:24,393 | INFO     | mean x: 1768132782.0
[2026-01-11 14:07:15] 2026-01-11 13:06:24,393 | INFO     | mean y: 2330859.781512605
[2026-01-11 14:07:15] 2026-01-11 13:06:24,393 | INFO     | intersect: 12722214457.702026
[2026-01-11 14:07:15] 2026-01-11 13:06:24,393 | INFO     | chi2: 0.03096543122382018
[2026-01-11 14:07:15] 2026-01-11 13:06:24,393 | INFO     | current memory leak: -7.19 B/s (using 119 data points, chi2=0.03)
[2026-01-11 14:07:15] 2026-01-11 13:06:24,393 | INFO     | could have reported an average CPU frequency of 4332 MHz (9 samples)
[2026-01-11 14:07:15] 2026-01-11 13:06:24,393 | INFO     | ..............................
[2026-01-11 14:07:15] 2026-01-11 13:06:24,393 | INFO     | . Timing measurements:
[2026-01-11 14:07:15] 2026-01-11 13:06:24,393 | INFO     | . get job = 0 s
[2026-01-11 14:07:15] 2026-01-11 13:06:24,393 | INFO     | . initial setup = 0 s
[2026-01-11 14:07:15] 2026-01-11 13:06:24,393 | INFO     | . payload setup = 3 s
[2026-01-11 14:07:15] 2026-01-11 13:06:24,393 | INFO     | . stage-in = 0 s
[2026-01-11 14:07:15] 2026-01-11 13:06:24,393 | INFO     | . payload execution = 9425 s
[2026-01-11 14:07:15] 2026-01-11 13:06:24,393 | INFO     | . stage-out = 0 s
[2026-01-11 14:07:15] 2026-01-11 13:06:24,393 | INFO     | . log creation = 0 s
[2026-01-11 14:07:15] 2026-01-11 13:06:24,393 | INFO     | ..............................
[2026-01-11 14:07:15] 2026-01-11 13:06:24,439 | INFO     | 
[2026-01-11 14:07:15] 2026-01-11 13:06:24,439 | INFO     | job summary report
[2026-01-11 14:07:15] 2026-01-11 13:06:24,439 | INFO     | --------------------------------------------------
[2026-01-11 14:07:15] 2026-01-11 13:06:24,439 | INFO     | PanDA job id: 6963157181
[2026-01-11 14:07:15] 2026-01-11 13:06:24,439 | INFO     | task id: 47898826
[2026-01-11 14:07:15] 2026-01-11 13:06:24,439 | INFO     | errors: (none)
[2026-01-11 14:07:15] 2026-01-11 13:06:24,439 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 14:07:15] 2026-01-11 13:06:24,439 | INFO     | pilot state: finished 
[2026-01-11 14:07:15] 2026-01-11 13:06:24,439 | INFO     | transexitcode: 0
[2026-01-11 14:07:15] 2026-01-11 13:06:24,439 | INFO     | exeerrorcode: 0
[2026-01-11 14:07:15] 2026-01-11 13:06:24,439 | INFO     | exeerrordiag: 
[2026-01-11 14:07:15] 2026-01-11 13:06:24,439 | INFO     | exitcode: 0
[2026-01-11 14:07:15] 2026-01-11 13:06:24,439 | INFO     | exitmsg: OK
[2026-01-11 14:07:15] 2026-01-11 13:06:24,439 | INFO     | cpuconsumptiontime: 27683 s
[2026-01-11 14:07:15] 2026-01-11 13:06:24,439 | INFO     | nevents: 400
[2026-01-11 14:07:15] 2026-01-11 13:06:24,439 | INFO     | neventsw: 0
[2026-01-11 14:07:15] 2026-01-11 13:06:24,439 | INFO     | pid: 3755601
[2026-01-11 14:07:15] 2026-01-11 13:06:24,439 | INFO     | pgrp: 3755601
[2026-01-11 14:07:15] 2026-01-11 13:06:24,439 | INFO     | corecount: 3
[2026-01-11 14:07:15] 2026-01-11 13:06:24,439 | INFO     | event service: False
[2026-01-11 14:07:15] 2026-01-11 13:06:24,439 | INFO     | sizes: {0: 2283972, 2: 2284234, 11: 2284262, 9432: 2312843, 9434: 2321843, 9435: 2321899, 9437: 2322285}
[2026-01-11 14:07:15] 2026-01-11 13:06:24,439 | INFO     | --------------------------------------------------
[2026-01-11 14:07:15] 2026-01-11 13:06:24,439 | INFO     | 
[2026-01-11 14:07:15] 2026-01-11 13:06:24,440 | INFO     | executing command: ls -lF /var/lib/boinc2/slots/1
[2026-01-11 14:07:15] 2026-01-11 13:06:24,452 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 14:07:15] 2026-01-11 13:06:24,452 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 14:07:15] 2026-01-11 13:06:24,452 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 14:07:15] 2026-01-11 13:06:24,452 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 14:07:15] 2026-01-11 13:06:24,452 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 14:07:15] 2026-01-11 13:06:24,452 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 14:07:15] 2026-01-11 13:06:24,452 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 14:07:15] 2026-01-11 13:06:24,452 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 14:07:15] 2026-01-11 13:06:24,452 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 14:07:15] 2026-01-11 13:06:24,452 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 14:07:15] 2026-01-11 13:06:24,452 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 14:07:15] 2026-01-11 13:06:24,452 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 14:07:15] 2026-01-11 13:06:24,452 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 14:07:15] 2026-01-11 13:06:24,452 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 14:07:15] 2026-01-11 13:06:24,452 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 14:07:15] 2026-01-11 13:06:24,453 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 14:07:15] 2026-01-11 13:06:24,453 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 14:07:15] 2026-01-11 13:06:24,453 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 14:07:15] 2026-01-11 13:06:24,453 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 14:07:15] 2026-01-11 13:06:24,453 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 14:07:15] 2026-01-11 13:06:24,453 | INFO     | job 6963157181 has completed (purged errors)
[2026-01-11 14:07:15] 2026-01-11 13:06:24,453 | INFO     | overall cleanup function is called
[2026-01-11 14:07:15] 2026-01-11 13:06:24,813 | INFO     | PID=3749155 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 14:07:15] 2026-01-11 13:06:24,813 | INFO     | .. there are 3 such processes running
[2026-01-11 14:07:15] 2026-01-11 13:06:25,459 | INFO     | --- collectZombieJob: --- 10, [3755601]
[2026-01-11 14:07:15] 2026-01-11 13:06:25,459 | INFO     | zombie collector waiting for pid 3755601
[2026-01-11 14:07:15] 2026-01-11 13:06:25,459 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 14:07:15] 2026-01-11 13:06:25,459 | INFO     | collected zombie processes
[2026-01-11 14:07:15] 2026-01-11 13:06:25,460 | INFO     | will attempt to kill all subprocesses of pid=3755601
[2026-01-11 14:07:15] 2026-01-11 13:06:25,516 | INFO     | process IDs to be killed: [3755601] (in reverse order)
[2026-01-11 14:07:15] 2026-01-11 13:06:25,547 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 14:07:15] 2026-01-11 13:06:25,548 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 14:07:15] 2026-01-11 13:06:25,550 | INFO     | did not find any defunct processes belonging to 3755601
[2026-01-11 14:07:15] 2026-01-11 13:06:25,551 | INFO     | did not find any defunct processes belonging to 3755601
[2026-01-11 14:07:15] 2026-01-11 13:06:25,552 | INFO     | ready for new job
[2026-01-11 14:07:15] 2026-01-11 13:06:25,552 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 14:07:15] 2026-01-11 13:06:25,553 | INFO     | ***************************************
[2026-01-11 14:07:15] 2026-01-11 13:06:25,553 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 14:07:15] 2026-01-11 13:06:25,553 | INFO     | ***************************************
[2026-01-11 14:07:15] 2026-01-11 13:06:25,553 | INFO     | 
[2026-01-11 14:07:15] 2026-01-11 13:06:25,553 | INFO     | architecture information:
[2026-01-11 14:07:15] 2026-01-11 13:06:25,553 | INFO     | executing command: cat /etc/os-release
[2026-01-11 14:07:15] 2026-01-11 13:06:25,564 | INFO     | cat /etc/os-release:
[2026-01-11 14:07:15] NAME="CentOS Linux"
[2026-01-11 14:07:15] VERSION="7 (Core)"
[2026-01-11 14:07:15] ID="centos"
[2026-01-11 14:07:15] ID_LIKE="rhel fedora"
[2026-01-11 14:07:15] VERSION_ID="7"
[2026-01-11 14:07:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 14:07:15] ANSI_COLOR="0;31"
[2026-01-11 14:07:15] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 14:07:15] HOME_URL="https://www.centos.org/"
[2026-01-11 14:07:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 14:07:15] 
[2026-01-11 14:07:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 14:07:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 14:07:15] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 14:07:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 14:07:15] 
[2026-01-11 14:07:15] 2026-01-11 13:06:25,564 | INFO     | ***************************************
[2026-01-11 14:07:15] 2026-01-11 13:06:26,067 | INFO     | executing command: df -mP /var/lib/boinc2/slots/1
[2026-01-11 14:07:15] 2026-01-11 13:06:26,077 | INFO     | sufficient remaining disk space (98278834176 B)
[2026-01-11 14:07:15] 2026-01-11 13:06:26,077 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 14:07:15] 2026-01-11 13:06:26,077 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 14:07:15] 2026-01-11 13:06:26,077 | INFO     | update_server=False
[2026-01-11 14:07:15] 2026-01-11 13:06:26,077 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 14:07:15] 2026-01-11 13:06:26,077 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 14:07:15] 2026-01-11 13:06:26,077 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 14:07:15] 2026-01-11 13:06:26,156 | INFO     | all payload control threads have been joined
[2026-01-11 14:07:15] 2026-01-11 13:06:26,453 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-11 14:07:15] 2026-01-11 13:06:26,453 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-11 14:07:15] 2026-01-11 13:06:26,453 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 14:07:15] 2026-01-11 13:06:26,453 | INFO     | will abort loop
[2026-01-11 14:07:15] 2026-01-11 13:06:27,034 | INFO     | all job control threads have been joined
[2026-01-11 14:07:15] 2026-01-11 13:06:27,082 | INFO     | [job] retrieve thread has finished
[2026-01-11 14:07:15] 2026-01-11 13:06:27,083 | INFO     | [job] queue monitor thread has finished
[2026-01-11 14:07:15] 2026-01-11 13:06:27,102 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 14:07:15] 2026-01-11 13:06:27,156 | INFO     | all data control threads have been joined
[2026-01-11 14:07:15] 2026-01-11 13:06:27,161 | INFO     | [payload] control thread has finished
[2026-01-11 14:07:15] 2026-01-11 13:06:27,211 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 14:07:15] 2026-01-11 13:06:27,384 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 14:07:15] 2026-01-11 13:06:27,458 | INFO     | [job] job monitor thread has finished
[2026-01-11 14:07:15] 2026-01-11 13:06:27,606 | INFO     | [data] copytool_in thread has finished
[2026-01-11 14:07:15] 2026-01-11 13:06:27,764 | INFO     | [payload] validate_post thread has finished
[2026-01-11 14:07:15] 2026-01-11 13:06:28,039 | INFO     | [job] control thread has finished
[2026-01-11 14:07:15] 2026-01-11 13:06:28,047 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 14:07:15] 2026-01-11 13:06:28,047 | INFO     | [payload] failed_post thread has finished
[2026-01-11 14:07:15] 2026-01-11 13:06:28,080 | INFO     | [data] copytool_out thread has finished
[2026-01-11 14:07:15] 2026-01-11 13:06:28,161 | INFO     | [data] control thread has finished
[2026-01-11 14:07:15] 2026-01-11 13:06:28,224 | INFO     | [job] validate thread has finished
[2026-01-11 14:07:15] 2026-01-11 13:06:28,584 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 14:07:15] 2026-01-11 13:06:32,052 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 14:07:15] 2026-01-11 13:06:56,936 | INFO     | PID=3749155 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 14:07:15] 2026-01-11 13:06:56,936 | INFO     | .. there are 3 such processes running
[2026-01-11 14:07:15] 2026-01-11 13:06:56,937 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 14:07:15] 2026-01-11 13:06:56,937 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 14:07:15] 2026-01-11 13:06:56,937 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 14:07:15] 2026-01-11 13:07:08,967 | INFO     | [monitor] cgroup control has ended
[2026-01-11 14:07:15] 2026-01-11 13:07:10,121 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140399679260480)>', '<ExcThread(monitor, started 140399049959168)>']
[2026-01-11 14:07:15] 2026-01-11 13:07:10,997 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 14:07:15] 2026-01-11 13:07:10,997 | INFO     | [monitor] control thread has ended
[2026-01-11 14:07:15] 2026-01-11 13:07:15,146 | INFO     | all workflow threads have been joined
[2026-01-11 14:07:15] 2026-01-11 13:07:15,146 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 14:07:15] 2026-01-11 13:07:15,146 | INFO     | traces error code: 0
[2026-01-11 14:07:15] 2026-01-11 13:07:15,147 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 14:07:15] 2026-01-11 13:07:15,212 [wrapper] ==== pilot stdout END ====
[2026-01-11 14:07:15] 2026-01-11 13:07:15,214 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 14:07:15] 2026-01-11 13:07:15,215 [wrapper] pilotpid: 3749155
[2026-01-11 14:07:15] 2026-01-11 13:07:15,216 [wrapper] Pilot exit status: 0
[2026-01-11 14:07:15] 2026-01-11 13:07:15,224 [wrapper] pandaids: 6963157181
[2026-01-11 14:07:15] 2026-01-11 13:07:15,241 [wrapper] cleanup supervisor_pilot 3853067 3749156
[2026-01-11 14:07:15] 2026-01-11 13:07:15,243 [wrapper] Test setup, not cleaning
[2026-01-11 14:07:15] 2026-01-11 13:07:15,245 [wrapper] apfmon messages muted
[2026-01-11 14:07:15] 2026-01-11 13:07:15,246 [wrapper] ==== wrapper stdout END ====
[2026-01-11 14:07:15] 2026-01-11 13:07:15,248 [wrapper] ==== wrapper stderr END ====
[2026-01-11 14:07:15]  *** Error codes and diagnostics ***
[2026-01-11 14:07:15]     "exeErrorCode": 0,
[2026-01-11 14:07:15]     "exeErrorDiag": "",
[2026-01-11 14:07:15]     "pilotErrorCode": 0,
[2026-01-11 14:07:15]     "pilotErrorDiag": "",
[2026-01-11 14:07:15]  *** Listing of results directory ***
[2026-01-11 14:07:15] insgesamt 438792
[2026-01-11 14:07:15] -rw-r--r-- 1 boinc boinc    579449  8. Jan 22:44 pilot3.tar.gz
[2026-01-11 14:07:15] -rwx------ 1 boinc boinc     36322  8. Jan 22:47 runpilot2-wrapper.sh
[2026-01-11 14:07:15] -rw-r--r-- 1 boinc boinc      5112  8. Jan 22:50 queuedata.json
[2026-01-11 14:07:15] -rw-r--r-- 1 boinc boinc       100 11. Jan 11:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 14:07:15] -rwxr-xr-x 1 boinc boinc      7986 11. Jan 11:28 run_atlas
[2026-01-11 14:07:15] -rw-r--r-- 1 boinc boinc       105 11. Jan 11:28 job.xml
[2026-01-11 14:07:15] -rw-r--r-- 2 boinc boinc     15847 11. Jan 11:28 start_atlas.sh
[2026-01-11 14:07:15] drwxrwx--x 2 boinc boinc      4096 11. Jan 11:28 shared
[2026-01-11 14:07:15] -rw-r--r-- 2 boinc boinc    592398 11. Jan 11:28 input.tar.gz
[2026-01-11 14:07:15] -rw-r--r-- 1 boinc boinc      9633 11. Jan 11:28 init_data.xml
[2026-01-11 14:07:15] -rw-r--r-- 2 boinc boinc 220660494 11. Jan 11:28 EVNT.47898824._001248.pool.root.1
[2026-01-11 14:07:15] -rw-r--r-- 1 boinc boinc         0 11. Jan 11:28 boinc_lockfile
[2026-01-11 14:07:15] -rw-r--r-- 1 boinc boinc      2520 11. Jan 11:28 pandaJob.out
[2026-01-11 14:07:15] -rw------- 1 boinc boinc        52 11. Jan 11:28 setup.sh.local
[2026-01-11 14:07:15] -rw------- 1 boinc boinc    989548 11. Jan 11:28 agis_schedconf.cvmfs.json
[2026-01-11 14:07:15] -rw------- 1 boinc boinc   1516240 11. Jan 11:28 agis_ddmendpoints.agis.ALL.json
[2026-01-11 14:07:15] drwx------ 5 boinc boinc      4096 11. Jan 11:28 pilot3
[2026-01-11 14:07:15] -rw------- 1 boinc boinc 221339065 11. Jan 14:05 HITS.47898826._032310.pool.root.1
[2026-01-11 14:07:15] -rw-r--r-- 1 boinc boinc       529 11. Jan 14:06 boinc_task_state.xml
[2026-01-11 14:07:15] -rw------- 1 boinc boinc      1019 11. Jan 14:06 memory_monitor_summary.json
[2026-01-11 14:07:15] -rw------- 1 boinc boinc    317717 11. Jan 14:06 log.47898826._032310.job.log.tgz.1
[2026-01-11 14:07:15] -rw------- 1 boinc boinc      7758 11. Jan 14:06 heartbeat.json
[2026-01-11 14:07:15] -rw-r--r-- 1 boinc boinc      8192 11. Jan 14:06 boinc_mmap_file
[2026-01-11 14:07:15] -rw-r--r-- 1 boinc boinc        27 11. Jan 14:06 wrapper_checkpoint.txt
[2026-01-11 14:07:15] -rw------- 1 boinc boinc        95 11. Jan 14:06 pilot_heartbeat.json
[2026-01-11 14:07:15] -rw------- 1 boinc boinc      5010 11. Jan 14:07 pilotlog.txt
[2026-01-11 14:07:15] -rw------- 1 boinc boinc   1381176 11. Jan 14:07 log.47898826._032310.job.log.1
[2026-01-11 14:07:15] -rw------- 1 boinc boinc       357 11. Jan 14:07 output.list
[2026-01-11 14:07:15] -rw-r--r-- 1 boinc boinc       620 11. Jan 14:07 runtime_log
[2026-01-11 14:07:15] -rw------- 1 boinc boinc   1720320 11. Jan 14:07 result.tar.gz
[2026-01-11 14:07:15] -rw-r--r-- 1 boinc boinc      9298 11. Jan 14:07 runtime_log.err
[2026-01-11 14:07:15] -rw------- 1 boinc boinc       642 11. Jan 14:07 rPLLDmN2Cy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmKMgKDmnGcMHn.diag
[2026-01-11 14:07:15] -rw-r--r-- 1 boinc boinc     20841 11. Jan 14:07 stderr.txt
[2026-01-11 14:07:15] HITS file was successfully produced:
[2026-01-11 14:07:15] -rw------- 1 boinc boinc 221339065 11. Jan 14:05 shared/HITS.pool.root.1
[2026-01-11 14:07:15]  *** Contents of shared directory: ***
[2026-01-11 14:07:15] insgesamt 433928
[2026-01-11 14:07:15] -rw-r--r-- 2 boinc boinc     15847 11. Jan 11:28 start_atlas.sh
[2026-01-11 14:07:15] -rw-r--r-- 2 boinc boinc    592398 11. Jan 11:28 input.tar.gz
[2026-01-11 14:07:15] -rw-r--r-- 2 boinc boinc 220660494 11. Jan 11:28 ATLAS.root_0
[2026-01-11 14:07:15] -rw------- 1 boinc boinc 221339065 11. Jan 14:05 HITS.pool.root.1
[2026-01-11 14:07:15] -rw------- 1 boinc boinc   1720320 11. Jan 14:07 result.tar.gz
14:07:17 (3745434): run_atlas exited; CPU time 27749.849190
14:07:17 (3745434): called boinc_finish(0)

</stderr_txt>
]]>

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