Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:18:49 (3838216): wrapper (7.7.26015): starting
13:18:49 (3838216): wrapper: running run_atlas (--nthreads 9)
[2026-01-09 13:18:49] Arguments: --nthreads 9
[2026-01-09 13:18:49] Threads: 9
[2026-01-09 13:18:49] Checking for CVMFS
[2026-01-09 13:18:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 13:18:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 13:18:49] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 13:18:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 13:18:51] 2.13.3.0 5206 70848 735960 154952 3 33 30686107 40960001 62412 16776704 0 646596056 99.813 309395157 29785 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 13:18:51] CVMFS is ok
[2026-01-09 13:18:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 13:18:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 13:18:51] Further information can be found at the LHC@home message board.
[2026-01-09 13:18:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 13:18:51] Checking for apptainer binary...
[2026-01-09 13:18:51] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 13:18:51] Running /usr/bin/apptainer --version
[2026-01-09 13:18:51] apptainer version 1.4.5-2.el9
[2026-01-09 13:18:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 13:18:52] lc-12-9.aglt2.org
[2026-01-09 13:18:52] apptainer works
[2026-01-09 13:18:52] Set ATHENA_PROC_NUMBER=9
[2026-01-09 13:18:52] Set ATHENA_CORE_NUMBER=9
[2026-01-09 13:18:52] Starting ATLAS job with PandaID=6963156728
[2026-01-09 13:18:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 20:39:02]  *** The last 200 lines of the pilot log: ***
[2026-01-09 20:39:02] 2026-01-10 01:38:02,928 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2953.8808958333325
[2026-01-09 20:39:02] 2026-01-10 01:38:03,090 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963156728/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 20:39:02] 2026-01-10 01:38:03,090 | INFO     | extracted standard info from prmon json
[2026-01-09 20:39:02] 2026-01-10 01:38:03,090 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 20:39:02] 2026-01-10 01:38:03,090 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 20:39:02] 2026-01-10 01:38:03,091 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 20:39:02] 2026-01-10 01:38:03,091 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 20:39:02] 2026-01-10 01:38:03,131 | INFO     | fitting pss+swap vs Time
[2026-01-09 20:39:02] 2026-01-10 01:38:03,131 | INFO     | sum of square deviations: 24311107598.299355
[2026-01-09 20:39:02] 2026-01-10 01:38:03,165 | INFO     | sum of deviations: 75153979126.00012
[2026-01-09 20:39:02] 2026-01-10 01:38:03,165 | INFO     | mean x: 1767995968.5794392
[2026-01-09 20:39:02] 2026-01-10 01:38:03,165 | INFO     | mean y: 2539377.0
[2026-01-09 20:39:02] 2026-01-10 01:38:03,166 | INFO     | intersect: -5462943081.181642
[2026-01-09 20:39:02] 2026-01-10 01:38:03,166 | INFO     | chi2: 3.5627801021764967
[2026-01-09 20:39:02] 2026-01-10 01:38:03,194 | INFO     | sum of square deviations: 23468999853.267155
[2026-01-09 20:39:02] 2026-01-10 01:38:03,228 | INFO     | sum of deviations: 129767176477.95757
[2026-01-09 20:39:02] 2026-01-10 01:38:03,228 | INFO     | mean x: 1767995816.0803783
[2026-01-09 20:39:02] 2026-01-10 01:38:03,228 | INFO     | mean y: 2549195.765957447
[2026-01-09 20:39:02] 2026-01-10 01:38:03,228 | INFO     | intersect: -9773232751.14364
[2026-01-09 20:39:02] 2026-01-10 01:38:03,229 | INFO     | chi2: 2.1468304435115644
[2026-01-09 20:39:02] 2026-01-10 01:38:03,229 | INFO     | current chi2=2.1468304435115644 (change=39.74283054404427 %)
[2026-01-09 20:39:02] 2026-01-10 01:38:03,233 | INFO     | sum of square deviations: 22646540847.89476
[2026-01-09 20:39:02] 2026-01-10 01:38:03,258 | INFO     | sum of deviations: 127943502756.10529
[2026-01-09 20:39:02] 2026-01-10 01:38:03,258 | INFO     | mean x: 1767995663.5789473
[2026-01-09 20:39:02] 2026-01-10 01:38:03,258 | INFO     | mean y: 2548857.6028708136
[2026-01-09 20:39:02] 2026-01-10 01:38:03,258 | INFO     | intersect: -9985888651.471424
[2026-01-09 20:39:02] 2026-01-10 01:38:03,259 | INFO     | chi2: 2.147028666149294
[2026-01-09 20:39:02] 2026-01-10 01:38:03,259 | INFO     | current chi2=2.147028666149294 (change=-0.009233269368283031 %)
[2026-01-09 20:39:02] 2026-01-10 01:38:03,259 | INFO     | right removable region: 417
[2026-01-09 20:39:02] 2026-01-10 01:38:03,259 | INFO     | sum of square deviations: 23468979113.26716
[2026-01-09 20:39:02] 2026-01-10 01:38:03,284 | INFO     | sum of deviations: -19319818062.494095
[2026-01-09 20:39:02] 2026-01-10 01:38:03,309 | INFO     | mean x: 1767996121.0803783
[2026-01-09 20:39:02] 2026-01-10 01:38:03,309 | INFO     | mean y: 2556429.338061466
[2026-01-09 20:39:02] 2026-01-10 01:38:03,309 | INFO     | intersect: 1457982471.9288456
[2026-01-09 20:39:02] 2026-01-10 01:38:03,309 | INFO     | chi2: 1.5230091786083684
[2026-01-09 20:39:02] 2026-01-10 01:38:03,310 | INFO     | current chi2=1.5230091786083684 (change=57.25222621295195 %)
[2026-01-09 20:39:02] 2026-01-10 01:38:03,310 | INFO     | sum of square deviations: 22646551461.894756
[2026-01-09 20:39:02] 2026-01-10 01:38:03,403 | INFO     | sum of deviations: -29428522611.68421
[2026-01-09 20:39:02] 2026-01-10 01:38:03,403 | INFO     | mean x: 1767996273.5789473
[2026-01-09 20:39:02] 2026-01-10 01:38:03,403 | INFO     | mean y: 2558291.7177033494
[2026-01-09 20:39:02] 2026-01-10 01:38:03,403 | INFO     | intersect: 2300017063.8374543
[2026-01-09 20:39:02] 2026-01-10 01:38:03,404 | INFO     | chi2: 1.4865023888994946
[2026-01-09 20:39:02] 2026-01-10 01:38:03,404 | INFO     | current chi2=1.4865023888994946 (change=2.3970170516130063 %)
[2026-01-09 20:39:02] 2026-01-10 01:38:03,404 | INFO     | left removable region: 20
[2026-01-09 20:39:02] 2026-01-10 01:38:03,404 | INFO     | sum of square deviations: 19401965880.02518
[2026-01-09 20:39:02] 2026-01-10 01:38:03,490 | INFO     | sum of deviations: 34530119237.158676
[2026-01-09 20:39:02] 2026-01-10 01:38:03,490 | INFO     | mean x: 1767996243.070529
[2026-01-09 20:39:02] 2026-01-10 01:38:03,490 | INFO     | mean y: 2566366.2443324937
[2026-01-09 20:39:02] 2026-01-10 01:38:03,491 | INFO     | intersect: -3143976693.442499
[2026-01-09 20:39:02] 2026-01-10 01:38:03,491 | INFO     | chi2: 0.00433877816976389
[2026-01-09 20:39:02] 2026-01-10 01:38:03,491 | INFO     | current memory leak: 1.78 B/s (using 397 data points, chi2=0.00)
[2026-01-09 20:39:02] 2026-01-10 01:38:03,513 | INFO     | could have reported an average CPU frequency of 2908 MHz (18 samples)
[2026-01-09 20:39:02] 2026-01-10 01:38:03,513 | INFO     | ..............................
[2026-01-09 20:39:02] 2026-01-10 01:38:03,513 | INFO     | . Timing measurements:
[2026-01-09 20:39:02] 2026-01-10 01:38:03,514 | INFO     | . get job = 0 s
[2026-01-09 20:39:02] 2026-01-10 01:38:03,514 | INFO     | . initial setup = 5 s
[2026-01-09 20:39:02] 2026-01-10 01:38:03,514 | INFO     | . payload setup = 40 s
[2026-01-09 20:39:02] 2026-01-10 01:38:03,514 | INFO     | . stage-in = 0 s
[2026-01-09 20:39:02] 2026-01-10 01:38:03,514 | INFO     | . payload execution = 26116 s
[2026-01-09 20:39:02] 2026-01-10 01:38:03,514 | INFO     | . stage-out = 8 s
[2026-01-09 20:39:02] 2026-01-10 01:38:03,514 | INFO     | . log creation = 1 s
[2026-01-09 20:39:02] 2026-01-10 01:38:03,514 | INFO     | ..............................
[2026-01-09 20:39:02] 2026-01-10 01:38:03,588 | INFO     | time since job start (26279s) is within the limit (349056.0s)
[2026-01-09 20:39:02] 2026-01-10 01:38:04,139 | INFO     | 
[2026-01-09 20:39:02] 2026-01-10 01:38:04,139 | INFO     | job summary report
[2026-01-09 20:39:02] 2026-01-10 01:38:04,139 | INFO     | --------------------------------------------------
[2026-01-09 20:39:02] 2026-01-10 01:38:04,139 | INFO     | PanDA job id: 6963156728
[2026-01-09 20:39:02] 2026-01-10 01:38:04,139 | INFO     | task id: 47898826
[2026-01-09 20:39:02] 2026-01-10 01:38:04,139 | INFO     | errors: (none)
[2026-01-09 20:39:02] 2026-01-10 01:38:04,139 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 20:39:02] 2026-01-10 01:38:04,139 | INFO     | pilot state: finished 
[2026-01-09 20:39:02] 2026-01-10 01:38:04,139 | INFO     | transexitcode: 0
[2026-01-09 20:39:02] 2026-01-10 01:38:04,140 | INFO     | exeerrorcode: 0
[2026-01-09 20:39:02] 2026-01-10 01:38:04,140 | INFO     | exeerrordiag: 
[2026-01-09 20:39:02] 2026-01-10 01:38:04,140 | INFO     | exitcode: 0
[2026-01-09 20:39:02] 2026-01-10 01:38:04,140 | INFO     | exitmsg: OK
[2026-01-09 20:39:02] 2026-01-10 01:38:04,140 | INFO     | cpuconsumptiontime: 60664 s
[2026-01-09 20:39:02] 2026-01-10 01:38:04,140 | INFO     | nevents: 400
[2026-01-09 20:39:02] 2026-01-10 01:38:04,140 | INFO     | neventsw: 0
[2026-01-09 20:39:02] 2026-01-10 01:38:04,141 | INFO     | pid: 3877730
[2026-01-09 20:39:02] 2026-01-10 01:38:04,141 | INFO     | pgrp: 3877730
[2026-01-09 20:39:02] 2026-01-10 01:38:04,141 | INFO     | corecount: 9
[2026-01-09 20:39:02] 2026-01-10 01:38:04,141 | INFO     | event service: False
[2026-01-09 20:39:02] 2026-01-10 01:38:04,141 | INFO     | sizes: {0: 2283744, 1: 2283999, 2: 2284027, 14: 2284027, 25: 2284055, 34: 2284345, 35: 2284501, 26162: 2320019, 26172: 2329017, 26175: 2329073, 26210: 2329267}
[2026-01-09 20:39:02] 2026-01-10 01:38:04,141 | INFO     | --------------------------------------------------
[2026-01-09 20:39:02] 2026-01-10 01:38:04,141 | INFO     | 
[2026-01-09 20:39:02] 2026-01-10 01:38:04,141 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-09 20:39:02] 2026-01-10 01:38:04,235 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 20:39:02] 2026-01-10 01:38:04,235 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 20:39:02] 2026-01-10 01:38:04,235 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 20:39:02] 2026-01-10 01:38:04,235 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 20:39:02] 2026-01-10 01:38:04,235 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 20:39:02] 2026-01-10 01:38:04,235 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 20:39:02] 2026-01-10 01:38:04,236 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 20:39:02] 2026-01-10 01:38:04,236 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 20:39:02] 2026-01-10 01:38:04,236 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 20:39:02] 2026-01-10 01:38:04,236 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 20:39:02] 2026-01-10 01:38:04,236 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 20:39:02] 2026-01-10 01:38:04,236 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 20:39:02] 2026-01-10 01:38:04,236 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 20:39:02] 2026-01-10 01:38:04,236 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 20:39:02] 2026-01-10 01:38:04,236 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 20:39:02] 2026-01-10 01:38:04,236 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 20:39:02] 2026-01-10 01:38:04,236 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 20:39:02] 2026-01-10 01:38:04,236 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 20:39:02] 2026-01-10 01:38:04,236 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 20:39:02] 2026-01-10 01:38:04,236 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 20:39:02] 2026-01-10 01:38:04,237 | INFO     | job 6963156728 has completed (purged errors)
[2026-01-09 20:39:02] 2026-01-10 01:38:04,237 | INFO     | overall cleanup function is called
[2026-01-09 20:39:02] 2026-01-10 01:38:05,247 | INFO     | --- collectZombieJob: --- 10, [3877730]
[2026-01-09 20:39:02] 2026-01-10 01:38:05,248 | INFO     | zombie collector waiting for pid 3877730
[2026-01-09 20:39:02] 2026-01-10 01:38:05,248 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 20:39:02] 2026-01-10 01:38:05,248 | INFO     | collected zombie processes
[2026-01-09 20:39:02] 2026-01-10 01:38:05,248 | INFO     | will attempt to kill all subprocesses of pid=3877730
[2026-01-09 20:39:02] 2026-01-10 01:38:09,821 | INFO     | process IDs to be killed: [3877730] (in reverse order)
[2026-01-09 20:39:02] 2026-01-10 01:38:10,365 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 20:39:02] 2026-01-10 01:38:10,365 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 20:39:02] 2026-01-10 01:38:10,560 | INFO     | did not find any defunct processes belonging to 3877730
[2026-01-09 20:39:02] 2026-01-10 01:38:10,726 | INFO     | did not find any defunct processes belonging to 3877730
[2026-01-09 20:39:02] 2026-01-10 01:38:10,727 | INFO     | ready for new job
[2026-01-09 20:39:02] 2026-01-10 01:38:10,727 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 20:39:02] 2026-01-10 01:38:10,733 | INFO     | ***************************************
[2026-01-09 20:39:02] 2026-01-10 01:38:10,733 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 20:39:02] 2026-01-10 01:38:10,733 | INFO     | ***************************************
[2026-01-09 20:39:02] 2026-01-10 01:38:10,733 | INFO     | 
[2026-01-09 20:39:02] 2026-01-10 01:38:10,749 | INFO     | architecture information:
[2026-01-09 20:39:02] 2026-01-10 01:38:10,758 | INFO     | executing command: cat /etc/os-release
[2026-01-09 20:39:02] 2026-01-10 01:38:10,864 | INFO     | cat /etc/os-release:
[2026-01-09 20:39:02] NAME="CentOS Linux"
[2026-01-09 20:39:02] VERSION="7 (Core)"
[2026-01-09 20:39:02] ID="centos"
[2026-01-09 20:39:02] ID_LIKE="rhel fedora"
[2026-01-09 20:39:02] VERSION_ID="7"
[2026-01-09 20:39:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 20:39:02] ANSI_COLOR="0;31"
[2026-01-09 20:39:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 20:39:02] HOME_URL="https://www.centos.org/"
[2026-01-09 20:39:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 20:39:02] 
[2026-01-09 20:39:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 20:39:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 20:39:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 20:39:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 20:39:02] 
[2026-01-09 20:39:02] 2026-01-10 01:38:10,864 | INFO     | ***************************************
[2026-01-09 20:39:02] 2026-01-10 01:38:11,368 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-09 20:39:02] 2026-01-10 01:38:11,473 | INFO     | sufficient remaining disk space (409327370240 B)
[2026-01-09 20:39:02] 2026-01-10 01:38:11,473 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 20:39:02] 2026-01-10 01:38:11,473 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 20:39:02] 2026-01-10 01:38:11,473 | INFO     | update_server=False
[2026-01-09 20:39:02] 2026-01-10 01:38:11,474 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 20:39:02] 2026-01-10 01:38:11,724 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 20:39:02] 2026-01-10 01:38:11,724 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 20:39:02] 2026-01-10 01:38:11,724 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 20:39:02] 2026-01-10 01:38:11,724 | INFO     | will abort loop
[2026-01-09 20:39:02] 2026-01-10 01:38:11,820 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 20:39:02] 2026-01-10 01:38:12,117 | INFO     | all payload control threads have been joined
[2026-01-09 20:39:02] 2026-01-10 01:38:12,169 | INFO     | all data control threads have been joined
[2026-01-09 20:39:02] 2026-01-10 01:38:12,174 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 20:39:02] 2026-01-10 01:38:12,482 | INFO     | [job] retrieve thread has finished
[2026-01-09 20:39:02] 2026-01-10 01:38:12,731 | INFO     | [job] job monitor thread has finished
[2026-01-09 20:39:02] 2026-01-10 01:38:12,805 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 20:39:02] 2026-01-10 01:38:12,805 | INFO     | [job] validate thread has finished
[2026-01-09 20:39:02] 2026-01-10 01:38:13,123 | INFO     | [payload] control thread has finished
[2026-01-09 20:39:02] 2026-01-10 01:38:13,174 | INFO     | [data] control thread has finished
[2026-01-09 20:39:02] 2026-01-10 01:38:13,177 | INFO     | [payload] validate_post thread has finished
[2026-01-09 20:39:02] 2026-01-10 01:38:13,212 | INFO     | all job control threads have been joined
[2026-01-09 20:39:02] 2026-01-10 01:38:13,270 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 20:39:02] 2026-01-10 01:38:13,302 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 20:39:02] 2026-01-10 01:38:13,302 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 20:39:02] 2026-01-10 01:38:13,436 | INFO     | [payload] failed_post thread has finished
[2026-01-09 20:39:02] 2026-01-10 01:38:13,804 | INFO     | [data] copytool_in thread has finished
[2026-01-09 20:39:02] 2026-01-10 01:38:13,804 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 20:39:02] 2026-01-10 01:38:13,846 | INFO     | [data] copytool_out thread has finished
[2026-01-09 20:39:02] 2026-01-10 01:38:14,221 | INFO     | [job] control thread has finished
[2026-01-09 20:39:02] 2026-01-10 01:38:14,277 | INFO     | [job] queue monitor thread has finished
[2026-01-09 20:39:02] 2026-01-10 01:38:16,193 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 20:39:02] 2026-01-10 01:38:43,922 | INFO     | PID=3847810 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 20:39:02] 2026-01-10 01:38:43,923 | INFO     | .. there are 97 such processes running
[2026-01-09 20:39:02] 2026-01-10 01:38:43,923 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 20:39:02] 2026-01-10 01:38:43,923 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 20:39:02] 2026-01-10 01:38:43,923 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 20:39:02] 2026-01-10 01:38:53,211 | INFO     | [monitor] cgroup control has ended
[2026-01-09 20:39:02] 2026-01-10 01:38:55,019 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140350437226304)>', '<ExcThread(monitor, started 140349716551424)>']
[2026-01-09 20:39:02] 2026-01-10 01:38:55,081 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 20:39:02] 2026-01-10 01:38:55,082 | INFO     | [monitor] control thread has ended
[2026-01-09 20:39:02] 2026-01-10 01:39:00,045 | INFO     | all workflow threads have been joined
[2026-01-09 20:39:02] 2026-01-10 01:39:00,045 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 20:39:02] 2026-01-10 01:39:00,045 | INFO     | traces error code: 0
[2026-01-09 20:39:02] 2026-01-10 01:39:00,045 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 20:39:02] 2026-01-10 01:39:01,387 [wrapper] ==== pilot stdout END ====
[2026-01-09 20:39:02] 2026-01-10 01:39:01,437 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 20:39:02] 2026-01-10 01:39:01,459 [wrapper] pilotpid: 3847810
[2026-01-09 20:39:02] 2026-01-10 01:39:01,497 [wrapper] Pilot exit status: 0
[2026-01-09 20:39:02] 2026-01-10 01:39:01,676 [wrapper] pandaids: 6963156728
[2026-01-09 20:39:02] 2026-01-10 01:39:01,943 [wrapper] cleanup supervisor_pilot   42730 3847811
[2026-01-09 20:39:02] 2026-01-10 01:39:01,953 [wrapper] Test setup, not cleaning
[2026-01-09 20:39:02] 2026-01-10 01:39:01,957 [wrapper] apfmon messages muted
[2026-01-09 20:39:02] 2026-01-10 01:39:01,973 [wrapper] ==== wrapper stdout END ====
[2026-01-09 20:39:02] 2026-01-10 01:39:01,994 [wrapper] ==== wrapper stderr END ====
[2026-01-09 20:39:02]  *** Error codes and diagnostics ***
[2026-01-09 20:39:02]     "exeErrorCode": 0,
[2026-01-09 20:39:02]     "exeErrorDiag": "",
[2026-01-09 20:39:02]     "pilotErrorCode": 0,
[2026-01-09 20:39:02]     "pilotErrorDiag": "",
[2026-01-09 20:39:02]  *** Listing of results directory ***
[2026-01-09 20:39:02] total 447992
[2026-01-09 20:39:02] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 16:44 pilot3.tar.gz
[2026-01-09 20:39:02] -rwx------. 1 boincer umatlas     36322 Jan  8 16:48 runpilot2-wrapper.sh
[2026-01-09 20:39:02] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 16:50 queuedata.json
[2026-01-09 20:39:02] -rw-r--r--. 1 boincer umatlas       100 Jan  9 13:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 20:39:02] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 13:18 run_atlas
[2026-01-09 20:39:02] -rw-r--r--. 1 boincer umatlas       105 Jan  9 13:18 job.xml
[2026-01-09 20:39:02] -rw-r--r--. 2 boincer umatlas 224287334 Jan  9 13:18 EVNT.47898824._001211.pool.root.1
[2026-01-09 20:39:02] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 13:18 start_atlas.sh
[2026-01-09 20:39:02] drwxrwx--x. 2 boincer umatlas        68 Jan  9 13:18 shared
[2026-01-09 20:39:02] -rw-r--r--. 2 boincer umatlas    592403 Jan  9 13:18 input.tar.gz
[2026-01-09 20:39:02] -rw-r--r--. 1 boincer umatlas         0 Jan  9 13:18 boinc_lockfile
[2026-01-09 20:39:02] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 13:18 pandaJob.out
[2026-01-09 20:39:02] -rw-------. 1 boincer umatlas    989372 Jan  9 13:19 agis_schedconf.cvmfs.json
[2026-01-09 20:39:02] drwx------. 5 boincer umatlas      4096 Jan  9 13:20 pilot3
[2026-01-09 20:39:02] -rw-r--r--. 1 boincer umatlas      6798 Jan  9 20:32 init_data.xml
[2026-01-09 20:39:02] -rw-------. 1 boincer umatlas 223628818 Jan  9 20:35 HITS.47898826._031877.pool.root.1
[2026-01-09 20:39:02] -rw-r--r--. 1 boincer umatlas       531 Jan  9 20:35 boinc_task_state.xml
[2026-01-09 20:39:02] -rw-------. 1 boincer umatlas      1043 Jan  9 20:37 memory_monitor_summary.json
[2026-01-09 20:39:02] -rw-------. 1 boincer umatlas   1516240 Jan  9 20:37 agis_ddmendpoints.agis.ALL.json
[2026-01-09 20:39:02] -rw-------. 1 boincer umatlas    581266 Jan  9 20:37 log.47898826._031877.job.log.tgz.1
[2026-01-09 20:39:02] -rw-------. 1 boincer umatlas        95 Jan  9 20:37 pilot_heartbeat.json
[2026-01-09 20:39:02] -rw-------. 1 boincer umatlas      7818 Jan  9 20:38 heartbeat.json
[2026-01-09 20:39:02] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 20:38 boinc_mmap_file
[2026-01-09 20:39:02] -rw-r--r--. 1 boincer umatlas        28 Jan  9 20:38 wrapper_checkpoint.txt
[2026-01-09 20:39:02] -rw-------. 1 boincer umatlas      5011 Jan  9 20:39 pilotlog.txt
[2026-01-09 20:39:02] -rw-------. 1 boincer umatlas   2880391 Jan  9 20:39 log.47898826._031877.job.log.1
[2026-01-09 20:39:02] -rw-------. 1 boincer umatlas       357 Jan  9 20:39 output.list
[2026-01-09 20:39:02] -rw-r--r--. 1 boincer umatlas       620 Jan  9 20:39 runtime_log
[2026-01-09 20:39:02] -rw-------. 1 boincer umatlas   3481600 Jan  9 20:39 result.tar.gz
[2026-01-09 20:39:02] -rw-r--r--. 1 boincer umatlas      8813 Jan  9 20:39 runtime_log.err
[2026-01-09 20:39:02] -rw-------. 1 boincer umatlas       657 Jan  9 20:39 BxbKDmM3Cy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmZblKDm0A1G7n.diag
[2026-01-09 20:39:02] -rw-r--r--. 1 boincer umatlas     21235 Jan  9 20:39 stderr.txt
[2026-01-09 20:39:02] HITS file was successfully produced:
[2026-01-09 20:39:02] -rw-------. 1 boincer umatlas 223628818 Jan  9 20:35 shared/HITS.pool.root.1
[2026-01-09 20:39:02]  *** Contents of shared directory: ***
[2026-01-09 20:39:02] total 441420
[2026-01-09 20:39:02] -rw-r--r--. 2 boincer umatlas 224287334 Jan  9 13:18 ATLAS.root_0
[2026-01-09 20:39:02] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 13:18 start_atlas.sh
[2026-01-09 20:39:02] -rw-r--r--. 2 boincer umatlas    592403 Jan  9 13:18 input.tar.gz
[2026-01-09 20:39:02] -rw-------. 1 boincer umatlas 223628818 Jan  9 20:35 HITS.pool.root.1
[2026-01-09 20:39:02] -rw-------. 1 boincer umatlas   3481600 Jan  9 20:39 result.tar.gz
20:39:03 (3838216): run_atlas exited; CPU time 62296.578912
20:39:03 (3838216): called boinc_finish(0)

</stderr_txt>
]]>

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