Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
16:21:42 (4068727): wrapper (7.7.26015): starting
16:21:42 (4068727): wrapper: running run_atlas (--nthreads 12)
[2026-01-10 16:21:42] Arguments: --nthreads 12
[2026-01-10 16:21:42] Threads: 12
[2026-01-10 16:21:42] Checking for CVMFS
[2026-01-10 16:21:42] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 16:21:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 16:21:42] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 16:21:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 16:21:43] 2.13.3.0 40677 2069 55380 154986 0 225 3108612 4096000 10247 130560 0 11370549 99.954 292449 274 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-01-10 16:21:43] CVMFS is ok
[2026-01-10 16:21:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 16:21:43] Checking for apptainer binary...
[2026-01-10 16:21:43] apptainer is not installed, using version from CVMFS
[2026-01-10 16:21:43] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 16:21:45] epyc7v12
[2026-01-10 16:21:45] apptainer works
[2026-01-10 16:21:45] Set ATHENA_PROC_NUMBER=12
[2026-01-10 16:21:45] Set ATHENA_CORE_NUMBER=12
[2026-01-10 16:21:46] Starting ATLAS job with PandaID=6963161570
[2026-01-10 16:21:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 19:15:42]  *** The last 200 lines of the pilot log: ***
[2026-01-10 19:15:42] 2026-01-10 19:14:41,538 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 19:15:42] 2026-01-10 19:14:41,545 | INFO     | fitting pss+swap vs Time
[2026-01-10 19:15:42] 2026-01-10 19:14:41,545 | INFO     | sum of square deviations: 1470255611.994046
[2026-01-10 19:15:42] 2026-01-10 19:14:41,546 | INFO     | sum of deviations: 39351891974.82735
[2026-01-10 19:15:42] 2026-01-10 19:14:41,547 | INFO     | mean x: 1768067301.5059524
[2026-01-10 19:15:42] 2026-01-10 19:14:41,547 | INFO     | mean y: 2633770.6726190476
[2026-01-10 19:15:42] 2026-01-10 19:14:41,547 | INFO     | intersect: -47320289458.11386
[2026-01-10 19:15:42] 2026-01-10 19:14:41,551 | INFO     | chi2: 1.9867721827056894
[2026-01-10 19:15:42] 2026-01-10 19:14:41,552 | INFO     | sum of square deviations: 1342848876.9938686
[2026-01-10 19:15:42] 2026-01-10 19:14:41,553 | INFO     | sum of deviations: 38079145241.822075
[2026-01-10 19:15:42] 2026-01-10 19:14:41,553 | INFO     | mean x: 1768067149.006135
[2026-01-10 19:15:42] 2026-01-10 19:14:41,553 | INFO     | mean y: 2632248.1779141105
[2026-01-10 19:15:42] 2026-01-10 19:14:41,553 | INFO     | intersect: -50134421085.044106
[2026-01-10 19:15:42] 2026-01-10 19:14:41,553 | INFO     | chi2: 1.9876987241021726
[2026-01-10 19:15:42] 2026-01-10 19:14:41,553 | INFO     | current chi2=1.9876987241021726 (change=-0.04663551284583471 %)
[2026-01-10 19:15:42] 2026-01-10 19:14:41,553 | INFO     | right removable region: 162
[2026-01-10 19:15:42] 2026-01-10 19:14:41,554 | INFO     | sum of square deviations: 1342848266.9938686
[2026-01-10 19:15:42] 2026-01-10 19:14:41,555 | INFO     | sum of deviations: 4183149210.214725
[2026-01-10 19:15:42] 2026-01-10 19:14:41,559 | INFO     | mean x: 1768067454.006135
[2026-01-10 19:15:42] 2026-01-10 19:14:41,559 | INFO     | mean y: 2675502.7852760735
[2026-01-10 19:15:42] 2026-01-10 19:14:41,559 | INFO     | intersect: -5505087478.053343
[2026-01-10 19:15:42] 2026-01-10 19:14:41,559 | INFO     | chi2: 0.15923794788874515
[2026-01-10 19:15:42] 2026-01-10 19:14:41,560 | INFO     | current chi2=0.15923794788874515 (change=91.98509274113721 %)
[2026-01-10 19:15:42] 2026-01-10 19:14:41,560 | INFO     | sum of square deviations: 1223022459.4936707
[2026-01-10 19:15:42] 2026-01-10 19:14:41,561 | INFO     | sum of deviations: -5534067947.822785
[2026-01-10 19:15:42] 2026-01-10 19:14:41,561 | INFO     | mean x: 1768067606.506329
[2026-01-10 19:15:42] 2026-01-10 19:14:41,561 | INFO     | mean y: 2687881.8227848103
[2026-01-10 19:15:42] 2026-01-10 19:14:41,561 | INFO     | intersect: 8003036685.557129
[2026-01-10 19:15:42] 2026-01-10 19:14:41,562 | INFO     | chi2: 0.04449583825625548
[2026-01-10 19:15:42] 2026-01-10 19:14:41,562 | INFO     | current chi2=0.04449583825625548 (change=72.0570135158088 %)
[2026-01-10 19:15:42] 2026-01-10 19:14:41,562 | INFO     | sum of square deviations: 1110545626.9934604
[2026-01-10 19:15:42] 2026-01-10 19:14:41,566 | INFO     | sum of deviations: -8066140435.830064
[2026-01-10 19:15:42] 2026-01-10 19:14:41,566 | INFO     | mean x: 1768067759.006536
[2026-01-10 19:15:42] 2026-01-10 19:14:41,566 | INFO     | mean y: 2691239.8300653594
[2026-01-10 19:15:42] 2026-01-10 19:14:41,566 | INFO     | intersect: 12844561485.917707
[2026-01-10 19:15:42] 2026-01-10 19:14:41,567 | INFO     | chi2: 0.012892145653712323
[2026-01-10 19:15:42] 2026-01-10 19:14:41,567 | INFO     | current chi2=0.012892145653712323 (change=71.02617647190887 %)
[2026-01-10 19:15:42] 2026-01-10 19:14:41,567 | INFO     | sum of square deviations: 1005185206.9932436
[2026-01-10 19:15:42] 2026-01-10 19:14:41,569 | INFO     | sum of deviations: -7601232711.689192
[2026-01-10 19:15:42] 2026-01-10 19:14:41,569 | INFO     | mean x: 1768067911.5067568
[2026-01-10 19:15:42] 2026-01-10 19:14:41,569 | INFO     | mean y: 2690562.689189189
[2026-01-10 19:15:42] 2026-01-10 19:14:41,569 | INFO     | intersect: 13372859116.635572
[2026-01-10 19:15:42] 2026-01-10 19:14:41,570 | INFO     | chi2: 0.0127256112390513
[2026-01-10 19:15:42] 2026-01-10 19:14:41,570 | INFO     | current chi2=0.0127256112390513 (change=1.2917509554592101 %)
[2026-01-10 19:15:42] 2026-01-10 19:14:41,570 | INFO     | left removable region: 40
[2026-01-10 19:15:42] 2026-01-10 19:14:41,570 | INFO     | sum of square deviations: 563030946.4918019
[2026-01-10 19:15:42] 2026-01-10 19:14:41,571 | INFO     | sum of deviations: -3090112429.344262
[2026-01-10 19:15:42] 2026-01-10 19:14:41,571 | INFO     | mean x: 1768068338.5081968
[2026-01-10 19:15:42] 2026-01-10 19:14:41,574 | INFO     | mean y: 2682631.844262295
[2026-01-10 19:15:42] 2026-01-10 19:14:41,574 | INFO     | intersect: 9706465315.18881
[2026-01-10 19:15:42] 2026-01-10 19:14:41,574 | INFO     | chi2: 0.009961787196543745
[2026-01-10 19:15:42] 2026-01-10 19:14:41,575 | INFO     | current memory leak: -5.49 B/s (using 122 data points, chi2=0.01)
[2026-01-10 19:15:42] 2026-01-10 19:14:41,575 | INFO     | could have reported an average CPU frequency of 2493 MHz (9 samples)
[2026-01-10 19:15:42] 2026-01-10 19:14:41,576 | INFO     | ..............................
[2026-01-10 19:15:42] 2026-01-10 19:14:41,579 | INFO     | . Timing measurements:
[2026-01-10 19:15:42] 2026-01-10 19:14:41,579 | INFO     | . get job = 0 s
[2026-01-10 19:15:42] 2026-01-10 19:14:41,579 | INFO     | . initial setup = 2 s
[2026-01-10 19:15:42] 2026-01-10 19:14:41,579 | INFO     | . payload setup = 18 s
[2026-01-10 19:15:42] 2026-01-10 19:14:41,579 | INFO     | . stage-in = 0 s
[2026-01-10 19:15:42] 2026-01-10 19:14:41,579 | INFO     | . payload execution = 10261 s
[2026-01-10 19:15:42] 2026-01-10 19:14:41,579 | INFO     | . stage-out = 2 s
[2026-01-10 19:15:42] 2026-01-10 19:14:41,580 | INFO     | . log creation = 0 s
[2026-01-10 19:15:42] 2026-01-10 19:14:41,580 | INFO     | ..............................
[2026-01-10 19:15:42] 2026-01-10 19:14:41,697 | INFO     | 
[2026-01-10 19:15:42] 2026-01-10 19:14:41,697 | INFO     | job summary report
[2026-01-10 19:15:42] 2026-01-10 19:14:41,697 | INFO     | --------------------------------------------------
[2026-01-10 19:15:42] 2026-01-10 19:14:41,697 | INFO     | PanDA job id: 6963161570
[2026-01-10 19:15:42] 2026-01-10 19:14:41,697 | INFO     | task id: 47898826
[2026-01-10 19:15:42] 2026-01-10 19:14:41,698 | INFO     | errors: (none)
[2026-01-10 19:15:42] 2026-01-10 19:14:41,698 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 19:15:42] 2026-01-10 19:14:41,698 | INFO     | pilot state: finished 
[2026-01-10 19:15:42] 2026-01-10 19:14:41,698 | INFO     | transexitcode: 0
[2026-01-10 19:15:42] 2026-01-10 19:14:41,698 | INFO     | exeerrorcode: 0
[2026-01-10 19:15:42] 2026-01-10 19:14:41,701 | INFO     | exeerrordiag: 
[2026-01-10 19:15:42] 2026-01-10 19:14:41,701 | INFO     | exitcode: 0
[2026-01-10 19:15:42] 2026-01-10 19:14:41,701 | INFO     | exitmsg: OK
[2026-01-10 19:15:42] 2026-01-10 19:14:41,701 | INFO     | cpuconsumptiontime: 62530 s
[2026-01-10 19:15:42] 2026-01-10 19:14:41,701 | INFO     | nevents: 400
[2026-01-10 19:15:42] 2026-01-10 19:14:41,701 | INFO     | neventsw: 0
[2026-01-10 19:15:42] 2026-01-10 19:14:41,701 | INFO     | pid: 4082520
[2026-01-10 19:15:42] 2026-01-10 19:14:41,701 | INFO     | pgrp: 4082520
[2026-01-10 19:15:42] 2026-01-10 19:14:41,702 | INFO     | corecount: 12
[2026-01-10 19:15:42] 2026-01-10 19:14:41,702 | INFO     | event service: False
[2026-01-10 19:15:42] 2026-01-10 19:14:41,702 | INFO     | sizes: {0: 2283142, 1: 2283850, 2: 2284049, 13: 2284049, 15: 2284367, 24: 2284395, 10284: 2313548, 10287: 2322592, 10291: 2322648, 10307: 2322906}
[2026-01-10 19:15:42] 2026-01-10 19:14:41,702 | INFO     | --------------------------------------------------
[2026-01-10 19:15:42] 2026-01-10 19:14:41,702 | INFO     | 
[2026-01-10 19:15:42] 2026-01-10 19:14:41,702 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/1
[2026-01-10 19:15:42] 2026-01-10 19:14:41,778 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 19:15:42] 2026-01-10 19:14:41,778 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 19:15:42] 2026-01-10 19:14:41,778 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 19:15:42] 2026-01-10 19:14:41,778 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 19:15:42] 2026-01-10 19:14:41,778 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 19:15:42] 2026-01-10 19:14:41,779 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 19:15:42] 2026-01-10 19:14:41,779 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 19:15:42] 2026-01-10 19:14:41,779 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 19:15:42] 2026-01-10 19:14:41,779 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 19:15:42] 2026-01-10 19:14:41,779 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 19:15:42] 2026-01-10 19:14:41,779 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 19:15:42] 2026-01-10 19:14:41,779 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 19:15:42] 2026-01-10 19:14:41,779 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 19:15:42] 2026-01-10 19:14:41,779 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 19:15:42] 2026-01-10 19:14:41,779 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 19:15:42] 2026-01-10 19:14:41,779 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 19:15:42] 2026-01-10 19:14:41,779 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 19:15:42] 2026-01-10 19:14:41,780 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 19:15:42] 2026-01-10 19:14:41,780 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 19:15:42] 2026-01-10 19:14:41,780 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 19:15:42] 2026-01-10 19:14:41,780 | INFO     | job 6963161570 has completed (purged errors)
[2026-01-10 19:15:42] 2026-01-10 19:14:41,780 | INFO     | overall cleanup function is called
[2026-01-10 19:15:42] 2026-01-10 19:14:42,798 | INFO     | --- collectZombieJob: --- 10, [4082520]
[2026-01-10 19:15:42] 2026-01-10 19:14:42,798 | INFO     | zombie collector waiting for pid 4082520
[2026-01-10 19:15:42] 2026-01-10 19:14:42,799 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 19:15:42] 2026-01-10 19:14:42,799 | INFO     | collected zombie processes
[2026-01-10 19:15:42] 2026-01-10 19:14:42,799 | INFO     | will attempt to kill all subprocesses of pid=4082520
[2026-01-10 19:15:42] 2026-01-10 19:14:43,921 | INFO     | process IDs to be killed: [4082520] (in reverse order)
[2026-01-10 19:15:42] 2026-01-10 19:14:44,427 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 19:15:42] 2026-01-10 19:14:44,427 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 19:15:42] 2026-01-10 19:14:44,462 | INFO     | did not find any defunct processes belonging to 4082520
[2026-01-10 19:15:42] 2026-01-10 19:14:44,497 | INFO     | did not find any defunct processes belonging to 4082520
[2026-01-10 19:15:42] 2026-01-10 19:14:44,500 | INFO     | ready for new job
[2026-01-10 19:15:42] 2026-01-10 19:14:44,500 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 19:15:42] 2026-01-10 19:14:44,503 | INFO     | ***************************************
[2026-01-10 19:15:42] 2026-01-10 19:14:44,503 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 19:15:42] 2026-01-10 19:14:44,503 | INFO     | ***************************************
[2026-01-10 19:15:42] 2026-01-10 19:14:44,503 | INFO     | 
[2026-01-10 19:15:42] 2026-01-10 19:14:44,524 | INFO     | architecture information:
[2026-01-10 19:15:42] 2026-01-10 19:14:44,529 | INFO     | executing command: cat /etc/os-release
[2026-01-10 19:15:42] 2026-01-10 19:14:44,597 | INFO     | cat /etc/os-release:
[2026-01-10 19:15:42] NAME="CentOS Linux"
[2026-01-10 19:15:42] VERSION="7 (Core)"
[2026-01-10 19:15:42] ID="centos"
[2026-01-10 19:15:42] ID_LIKE="rhel fedora"
[2026-01-10 19:15:42] VERSION_ID="7"
[2026-01-10 19:15:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 19:15:42] ANSI_COLOR="0;31"
[2026-01-10 19:15:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 19:15:42] HOME_URL="https://www.centos.org/"
[2026-01-10 19:15:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 19:15:42] 
[2026-01-10 19:15:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 19:15:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 19:15:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 19:15:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 19:15:42] 
[2026-01-10 19:15:42] 2026-01-10 19:14:44,598 | INFO     | ***************************************
[2026-01-10 19:15:42] 2026-01-10 19:14:45,104 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/1
[2026-01-10 19:15:42] 2026-01-10 19:14:45,169 | INFO     | sufficient remaining disk space (362665738240 B)
[2026-01-10 19:15:42] 2026-01-10 19:14:45,169 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 19:15:42] 2026-01-10 19:14:45,169 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 19:15:42] 2026-01-10 19:14:45,170 | INFO     | update_server=False
[2026-01-10 19:15:42] 2026-01-10 19:14:45,170 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 19:15:42] 2026-01-10 19:14:45,170 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 19:15:42] 2026-01-10 19:14:45,171 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 19:15:42] 2026-01-10 19:14:45,504 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 19:15:42] 2026-01-10 19:14:45,504 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 19:15:42] 2026-01-10 19:14:45,505 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:15:42] 2026-01-10 19:14:45,505 | INFO     | will abort loop
[2026-01-10 19:15:42] 2026-01-10 19:14:46,178 | INFO     | [job] retrieve thread has finished
[2026-01-10 19:15:42] 2026-01-10 19:14:46,196 | INFO     | all data control threads have been joined
[2026-01-10 19:15:42] 2026-01-10 19:14:46,210 | INFO     | [data] copytool_in thread has finished
[2026-01-10 19:15:42] 2026-01-10 19:14:46,438 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 19:15:42] 2026-01-10 19:14:46,494 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 19:15:42] 2026-01-10 19:14:46,511 | INFO     | [job] job monitor thread has finished
[2026-01-10 19:15:42] 2026-01-10 19:14:46,539 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 19:15:42] 2026-01-10 19:14:46,633 | INFO     | all payload control threads have been joined
[2026-01-10 19:15:42] 2026-01-10 19:14:46,636 | INFO     | all job control threads have been joined
[2026-01-10 19:15:42] 2026-01-10 19:14:46,716 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:15:42] 2026-01-10 19:14:46,721 | INFO     | [job] validate thread has finished
[2026-01-10 19:15:42] 2026-01-10 19:14:46,727 | INFO     | [payload] failed_post thread has finished
[2026-01-10 19:15:42] 2026-01-10 19:14:47,107 | INFO     | [payload] validate_post thread has finished
[2026-01-10 19:15:42] 2026-01-10 19:14:47,175 | INFO     | [data] copytool_out thread has finished
[2026-01-10 19:15:42] 2026-01-10 19:14:47,201 | INFO     | [data] control thread has finished
[2026-01-10 19:15:42] 2026-01-10 19:14:47,638 | INFO     | [payload] control thread has finished
[2026-01-10 19:15:42] 2026-01-10 19:14:47,642 | INFO     | [job] control thread has finished
[2026-01-10 19:15:42] 2026-01-10 19:14:47,645 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 19:15:42] 2026-01-10 19:14:47,721 | INFO     | [job] queue monitor thread has finished
[2026-01-10 19:15:42] 2026-01-10 19:14:49,179 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 19:15:42] 2026-01-10 19:15:15,647 | INFO     | PID=4072929 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 19:15:42] 2026-01-10 19:15:15,648 | INFO     | .. there are 12 such processes running
[2026-01-10 19:15:42] 2026-01-10 19:15:15,648 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 19:15:42] 2026-01-10 19:15:15,648 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 19:15:42] 2026-01-10 19:15:15,648 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 19:15:42] 2026-01-10 19:15:34,486 | INFO     | [monitor] cgroup control has ended
[2026-01-10 19:15:42] 2026-01-10 19:15:35,990 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 125636892505920)>', '<ExcThread(monitor, started 125636332984064)>']
[2026-01-10 19:15:42] 2026-01-10 19:15:36,774 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 19:15:42] 2026-01-10 19:15:36,774 | INFO     | [monitor] control thread has ended
[2026-01-10 19:15:42] 2026-01-10 19:15:41,015 | INFO     | all workflow threads have been joined
[2026-01-10 19:15:42] 2026-01-10 19:15:41,015 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 19:15:42] 2026-01-10 19:15:41,016 | INFO     | traces error code: 0
[2026-01-10 19:15:42] 2026-01-10 19:15:41,016 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 19:15:42] 2026-01-10 19:15:41,435 [wrapper] ==== pilot stdout END ====
[2026-01-10 19:15:42] 2026-01-10 19:15:41,444 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 19:15:42] 2026-01-10 19:15:41,451 [wrapper] pilotpid: 4072929
[2026-01-10 19:15:42] 2026-01-10 19:15:41,457 [wrapper] Pilot exit status: 0
[2026-01-10 19:15:42] 2026-01-10 19:15:41,493 [wrapper] pandaids: 6963161570
[2026-01-10 19:15:42] 2026-01-10 19:15:41,748 [wrapper] cleanup supervisor_pilot  230464 4072930
[2026-01-10 19:15:42] 2026-01-10 19:15:41,758 [wrapper] Test setup, not cleaning
[2026-01-10 19:15:42] 2026-01-10 19:15:41,769 [wrapper] apfmon messages muted
[2026-01-10 19:15:42] 2026-01-10 19:15:41,780 [wrapper] ==== wrapper stdout END ====
[2026-01-10 19:15:42] 2026-01-10 19:15:41,789 [wrapper] ==== wrapper stderr END ====
[2026-01-10 19:15:42]  *** Error codes and diagnostics ***
[2026-01-10 19:15:42]     "exeErrorCode": 0,
[2026-01-10 19:15:42]     "exeErrorDiag": "",
[2026-01-10 19:15:42]     "pilotErrorCode": 0,
[2026-01-10 19:15:42]     "pilotErrorDiag": "",
[2026-01-10 19:15:42]  *** Listing of results directory ***
[2026-01-10 19:15:42] total 443740
[2026-01-10 19:15:42] -rw-r--r-- 1 boinc boinc    579449 Jan  8 21:44 pilot3.tar.gz
[2026-01-10 19:15:42] -rwx------ 1 boinc boinc     36322 Jan  8 21:46 runpilot2-wrapper.sh
[2026-01-10 19:15:42] -rw-r--r-- 1 boinc boinc      5112 Jan  8 21:47 queuedata.json
[2026-01-10 19:15:42] -rw-rw-r-- 1 boinc boinc       100 Jan 10 16:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 19:15:42] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 16:21 run_atlas
[2026-01-10 19:15:42] -rw-rw-r-- 1 boinc boinc       105 Jan 10 16:21 job.xml
[2026-01-10 19:15:42] -rw-r--r-- 2 boinc boinc 223024405 Jan 10 16:21 EVNT.47898824._001285.pool.root.1
[2026-01-10 19:15:42] drwxrwx--x 2 boinc boinc      4096 Jan 10 16:21 shared
[2026-01-10 19:15:42] -rw-r--r-- 2 boinc boinc    592397 Jan 10 16:21 input.tar.gz
[2026-01-10 19:15:42] -rw-r--r-- 2 boinc boinc     15847 Jan 10 16:21 start_atlas.sh
[2026-01-10 19:15:42] -rw-rw-r-- 1 boinc boinc      7052 Jan 10 16:21 init_data.xml
[2026-01-10 19:15:42] -rw-rw-r-- 1 boinc boinc         0 Jan 10 16:21 boinc_setup_complete
[2026-01-10 19:15:42] -rw-rw-r-- 1 boinc boinc         0 Jan 10 16:21 boinc_lockfile
[2026-01-10 19:15:42] -rw-rw-r-- 1 boinc boinc      2519 Jan 10 16:21 pandaJob.out
[2026-01-10 19:15:42] -rw------- 1 boinc boinc    989556 Jan 10 16:22 agis_schedconf.cvmfs.json
[2026-01-10 19:15:42] -rw------- 1 boinc boinc   1516240 Jan 10 16:22 agis_ddmendpoints.agis.ALL.json
[2026-01-10 19:15:42] drwx------ 5 boinc boinc      4096 Jan 10 16:22 pilot3
[2026-01-10 19:15:42] -rw------- 1 boinc boinc 223691599 Jan 10 19:13 HITS.47898826._033232.pool.root.1
[2026-01-10 19:15:42] -rw-rw-r-- 1 boinc boinc       531 Jan 10 19:13 boinc_task_state.xml
[2026-01-10 19:15:42] -rw------- 1 boinc boinc      1023 Jan 10 19:14 memory_monitor_summary.json
[2026-01-10 19:15:42] -rw------- 1 boinc boinc    460902 Jan 10 19:14 log.47898826._033232.job.log.tgz.1
[2026-01-10 19:15:42] -rw------- 1 boinc boinc        95 Jan 10 19:14 pilot_heartbeat.json
[2026-01-10 19:15:42] -rw------- 1 boinc boinc      7739 Jan 10 19:14 heartbeat.json
[2026-01-10 19:15:42] -rw-rw-r-- 1 boinc boinc      8192 Jan 10 19:15 boinc_mmap_file
[2026-01-10 19:15:42] -rw-rw-r-- 1 boinc boinc        28 Jan 10 19:15 wrapper_checkpoint.txt
[2026-01-10 19:15:42] -rw------- 1 boinc boinc      5034 Jan 10 19:15 pilotlog.txt
[2026-01-10 19:15:42] -rw------- 1 boinc boinc   1417493 Jan 10 19:15 log.47898826._033232.job.log.1
[2026-01-10 19:15:42] -rw------- 1 boinc boinc       357 Jan 10 19:15 output.list
[2026-01-10 19:15:42] -rw-rw-r-- 1 boinc boinc       620 Jan 10 19:15 runtime_log
[2026-01-10 19:15:42] -rw------- 1 boinc boinc   1894400 Jan 10 19:15 result.tar.gz
[2026-01-10 19:15:42] -rw-rw-r-- 1 boinc boinc      9168 Jan 10 19:15 runtime_log.err
[2026-01-10 19:15:42] -rw------- 1 boinc boinc       654 Jan 10 19:15 ifTLDmG1Cy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm3IgKDm6cwNim.diag
[2026-01-10 19:15:42] -rw-rw-r-- 1 boinc boinc     20843 Jan 10 19:15 stderr.txt
[2026-01-10 19:15:42] HITS file was successfully produced:
[2026-01-10 19:15:42] -rw------- 1 boinc boinc 223691599 Jan 10 19:13 shared/HITS.pool.root.1
[2026-01-10 19:15:42]  *** Contents of shared directory: ***
[2026-01-10 19:15:42] total 438708
[2026-01-10 19:15:42] -rw-r--r-- 2 boinc boinc 223024405 Jan 10 16:21 ATLAS.root_0
[2026-01-10 19:15:42] -rw-r--r-- 2 boinc boinc    592397 Jan 10 16:21 input.tar.gz
[2026-01-10 19:15:42] -rw-r--r-- 2 boinc boinc     15847 Jan 10 16:21 start_atlas.sh
[2026-01-10 19:15:42] -rw------- 1 boinc boinc 223691599 Jan 10 19:13 HITS.pool.root.1
[2026-01-10 19:15:42] -rw------- 1 boinc boinc   1894400 Jan 10 19:15 result.tar.gz
19:15:43 (4068727): run_atlas exited; CPU time 63055.626950
19:15:43 (4068727): called boinc_finish(0)

</stderr_txt>
]]>

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