Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:30:29 (12739): wrapper (7.7.26015): starting
07:30:29 (12739): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 07:30:29] Arguments: --nthreads 12
[2026-01-09 07:30:29] Threads: 12
[2026-01-09 07:30:29] Checking for CVMFS
[2026-01-09 07:30:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 07:30:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 07:30:30] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 07:30:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 07:30:30] 2.11.2.0 3165 136665 95212 154942 0 59 13674157 20275201 1 130560 0 50613794 99.888 8117264 40746 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 07:30:30] CVMFS is ok
[2026-01-09 07:30:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 07:30:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 07:30:30] Further information can be found at the LHC@home message board.
[2026-01-09 07:30:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 07:30:30] Checking for apptainer binary...
[2026-01-09 07:30:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 07:30:30] Running /usr/bin/apptainer --version
[2026-01-09 07:30:30] apptainer version 1.3.2-1.el7
[2026-01-09 07:30:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 07:30:31] c-115-40.aglt2.org
[2026-01-09 07:30:31] apptainer works
[2026-01-09 07:30:31] Set ATHENA_PROC_NUMBER=12
[2026-01-09 07:30:31] Set ATHENA_CORE_NUMBER=12
[2026-01-09 07:30:31] Starting ATLAS job with PandaID=6963161908
[2026-01-09 07:30:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 09:04:01]  *** The last 200 lines of the pilot log: ***
[2026-01-09 09:04:01]  protocol_id=None
[2026-01-09 09:04:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-09 09:04:01]  replicas=None
[2026-01-09 09:04:01]  scope=mc23_13p6TeV
[2026-01-09 09:04:01]  status=None
[2026-01-09 09:04:01]  status_code=0
[2026-01-09 09:04:01]  storage_token=
[2026-01-09 09:04:01]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6963161908/log.47898826._033565.job.log.tgz.1
[2026-01-09 09:04:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f4/27/log.47898826._033565.job.log.tgz.1
[2026-01-09 09:04:01]  workdir=None
[2026-01-09 09:04:01] ]
[2026-01-09 09:04:01] 2026-01-09 14:03:10,655 | INFO     | transferring file log.47898826._033565.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6963161908/log.47898826._033565.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-09 09:04:01] 2026-01-09 14:03:10,655 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6963161908/log.47898826._033565.job.log.tgz.1 /tmp/boinchome/slots/0/log.47898826._033565.job
[2026-01-09 09:04:01] 2026-01-09 14:03:10,677 | INFO     | adding to output.list: log.47898826._033565.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f4/27/log.47898826._033565.job.log.tg
[2026-01-09 09:04:01] 2026-01-09 14:03:10,678 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-09 09:04:01] 2026-01-09 14:03:10,678 | INFO     | summary of transferred files:
[2026-01-09 09:04:01] 2026-01-09 14:03:10,679 | INFO     |  -- lfn=log.47898826._033565.job.log.tgz.1, status_code=0, status=transferred
[2026-01-09 09:04:01] 2026-01-09 14:03:10,679 | INFO     | stage-out finished correctly
[2026-01-09 09:04:01] 2026-01-09 14:03:11,327 | INFO     | time since job start (5545s) is within the limit (349056.0s)
[2026-01-09 09:04:01] 2026-01-09 14:03:11,368 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-09 09:04:01] 2026-01-09 14:03:11,751 | INFO     | job 6963161908 has state=finished
[2026-01-09 09:04:01] 2026-01-09 14:03:11,751 | INFO     | preparing for final server update for job 6963161908 in state='finished'
[2026-01-09 09:04:01] 2026-01-09 14:03:11,752 | INFO     | this job has now completed (state=finished)
[2026-01-09 09:04:01] 2026-01-09 14:03:11,752 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-09 09:04:01] 2026-01-09 14:03:11,752 | INFO     | log transfer has been attempted: DONE
[2026-01-09 09:04:01] 2026-01-09 14:03:11,752 | INFO     | job 6963161908 has finished - writing final server update
[2026-01-09 09:04:01] 2026-01-09 14:03:11,753 | INFO     | total number of processed events: 400 (read)
[2026-01-09 09:04:01] 2026-01-09 14:03:11,753 | INFO     | executing command: lscpu
[2026-01-09 09:04:01] 2026-01-09 14:03:11,776 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 09:04:01] 2026-01-09 14:03:13,332 | INFO     | time since job start (5547s) is within the limit (349056.0s)
[2026-01-09 09:04:01] 2026-01-09 14:03:13,427 | WARNING  | process 22933 can no longer be monitored (due to stat problems) - aborting
[2026-01-09 09:04:01] 2026-01-09 14:03:13,428 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963161908/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 09:04:01] 2026-01-09 14:03:13,513 | INFO     | number of running child processes to parent process 22933: 1
[2026-01-09 09:04:01] 2026-01-09 14:03:13,513 | INFO     | maximum number of monitored processes: 6
[2026-01-09 09:04:01] 2026-01-09 14:03:15,338 | INFO     | time since job start (5549s) is within the limit (349056.0s)
[2026-01-09 09:04:01] 2026-01-09 14:03:16,016 | INFO     | monitor loop #413: job 0:6963161908 is in state 'finished'
[2026-01-09 09:04:01] 2026-01-09 14:03:16,016 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 09:04:01] 2026-01-09 14:03:16,315 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 09:04:01] 2026-01-09 14:03:16,319 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1740.1666666666667
[2026-01-09 09:04:01] 2026-01-09 14:03:16,322 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963161908/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 09:04:01] 2026-01-09 14:03:16,337 | INFO     | extracted standard info from prmon json
[2026-01-09 09:04:01] 2026-01-09 14:03:16,337 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 09:04:01] 2026-01-09 14:03:16,337 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 09:04:01] 2026-01-09 14:03:16,337 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 09:04:01] 2026-01-09 14:03:16,337 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 09:04:01] 2026-01-09 14:03:16,339 | INFO     | fitting pss+swap vs Time
[2026-01-09 09:04:01] 2026-01-09 14:03:16,339 | INFO     | sum of square deviations: 183761585.0
[2026-01-09 09:04:01] 2026-01-09 14:03:16,340 | INFO     | sum of deviations: 436176230.00000006
[2026-01-09 09:04:01] 2026-01-09 14:03:16,340 | INFO     | mean x: 1767964711.5
[2026-01-09 09:04:01] 2026-01-09 14:03:16,340 | INFO     | mean y: 2701050.9523809524
[2026-01-09 09:04:01] 2026-01-09 14:03:16,340 | INFO     | intersect: -4193737408.3431664
[2026-01-09 09:04:01] 2026-01-09 14:03:16,340 | INFO     | chi2: 0.02002835766211993
[2026-01-09 09:04:01] 2026-01-09 14:03:16,341 | INFO     | current memory leak: 2.37 B/s (using 84 data points, chi2=0.02)
[2026-01-09 09:04:01] 2026-01-09 14:03:16,341 | INFO     | could have reported an average CPU frequency of 2104 MHz (7 samples)
[2026-01-09 09:04:01] 2026-01-09 14:03:16,341 | INFO     | ..............................
[2026-01-09 09:04:01] 2026-01-09 14:03:16,341 | INFO     | . Timing measurements:
[2026-01-09 09:04:01] 2026-01-09 14:03:16,341 | INFO     | . get job = 0 s
[2026-01-09 09:04:01] 2026-01-09 14:03:16,342 | INFO     | . initial setup = 2 s
[2026-01-09 09:04:01] 2026-01-09 14:03:16,342 | INFO     | . payload setup = 7 s
[2026-01-09 09:04:01] 2026-01-09 14:03:16,342 | INFO     | . stage-in = 0 s
[2026-01-09 09:04:01] 2026-01-09 14:03:16,342 | INFO     | . payload execution = 5516 s
[2026-01-09 09:04:01] 2026-01-09 14:03:16,342 | INFO     | . stage-out = 0 s
[2026-01-09 09:04:01] 2026-01-09 14:03:16,342 | INFO     | . log creation = 0 s
[2026-01-09 09:04:01] 2026-01-09 14:03:16,342 | INFO     | ..............................
[2026-01-09 09:04:01] 2026-01-09 14:03:16,415 | INFO     | 
[2026-01-09 09:04:01] 2026-01-09 14:03:16,415 | INFO     | job summary report
[2026-01-09 09:04:01] 2026-01-09 14:03:16,416 | INFO     | --------------------------------------------------
[2026-01-09 09:04:01] 2026-01-09 14:03:16,416 | INFO     | PanDA job id: 6963161908
[2026-01-09 09:04:01] 2026-01-09 14:03:16,416 | INFO     | task id: 47898826
[2026-01-09 09:04:01] 2026-01-09 14:03:16,416 | INFO     | errors: (none)
[2026-01-09 09:04:01] 2026-01-09 14:03:16,416 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 09:04:01] 2026-01-09 14:03:16,416 | INFO     | pilot state: finished 
[2026-01-09 09:04:01] 2026-01-09 14:03:16,417 | INFO     | transexitcode: 0
[2026-01-09 09:04:01] 2026-01-09 14:03:16,417 | INFO     | exeerrorcode: 0
[2026-01-09 09:04:01] 2026-01-09 14:03:16,417 | INFO     | exeerrordiag: 
[2026-01-09 09:04:01] 2026-01-09 14:03:16,417 | INFO     | exitcode: 0
[2026-01-09 09:04:01] 2026-01-09 14:03:16,417 | INFO     | exitmsg: OK
[2026-01-09 09:04:01] 2026-01-09 14:03:16,417 | INFO     | cpuconsumptiontime: 60097 s
[2026-01-09 09:04:01] 2026-01-09 14:03:16,418 | INFO     | nevents: 400
[2026-01-09 09:04:01] 2026-01-09 14:03:16,418 | INFO     | neventsw: 0
[2026-01-09 09:04:01] 2026-01-09 14:03:16,418 | INFO     | pid: 22933
[2026-01-09 09:04:01] 2026-01-09 14:03:16,418 | INFO     | pgrp: 22933
[2026-01-09 09:04:01] 2026-01-09 14:03:16,418 | INFO     | corecount: 12
[2026-01-09 09:04:01] 2026-01-09 14:03:16,418 | INFO     | event service: False
[2026-01-09 09:04:01] 2026-01-09 14:03:16,419 | INFO     | sizes: {0: 2283970, 1: 2283970, 5: 2284260, 11: 2284316, 5526: 2310872, 5528: 2319870, 5529: 2320054, 5534: 2320248}
[2026-01-09 09:04:01] 2026-01-09 14:03:16,419 | INFO     | --------------------------------------------------
[2026-01-09 09:04:01] 2026-01-09 14:03:16,419 | INFO     | 
[2026-01-09 09:04:01] 2026-01-09 14:03:16,419 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 09:04:01] 2026-01-09 14:03:16,443 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 09:04:01] 2026-01-09 14:03:16,443 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 09:04:01] 2026-01-09 14:03:16,443 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 09:04:01] 2026-01-09 14:03:16,443 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 09:04:01] 2026-01-09 14:03:16,444 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 09:04:01] 2026-01-09 14:03:16,444 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 09:04:01] 2026-01-09 14:03:16,444 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 09:04:01] 2026-01-09 14:03:16,444 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 09:04:01] 2026-01-09 14:03:16,444 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 09:04:01] 2026-01-09 14:03:16,444 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 09:04:01] 2026-01-09 14:03:16,445 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 09:04:01] 2026-01-09 14:03:16,445 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 09:04:01] 2026-01-09 14:03:16,445 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 09:04:01] 2026-01-09 14:03:16,445 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 09:04:01] 2026-01-09 14:03:16,446 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 09:04:01] 2026-01-09 14:03:16,446 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 09:04:01] 2026-01-09 14:03:16,446 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 09:04:01] 2026-01-09 14:03:16,446 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 09:04:01] 2026-01-09 14:03:16,446 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 09:04:01] 2026-01-09 14:03:16,447 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 09:04:01] 2026-01-09 14:03:16,447 | INFO     | job 6963161908 has completed (purged errors)
[2026-01-09 09:04:01] 2026-01-09 14:03:16,447 | INFO     | overall cleanup function is called
[2026-01-09 09:04:01] 2026-01-09 14:03:17,455 | INFO     | --- collectZombieJob: --- 10, [22933]
[2026-01-09 09:04:01] 2026-01-09 14:03:17,456 | INFO     | zombie collector waiting for pid 22933
[2026-01-09 09:04:01] 2026-01-09 14:03:17,456 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 09:04:01] 2026-01-09 14:03:17,456 | INFO     | collected zombie processes
[2026-01-09 09:04:01] 2026-01-09 14:03:17,456 | INFO     | will attempt to kill all subprocesses of pid=22933
[2026-01-09 09:04:01] 2026-01-09 14:03:17,546 | INFO     | process IDs to be killed: [22933] (in reverse order)
[2026-01-09 09:04:01] 2026-01-09 14:03:17,604 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 09:04:01] 2026-01-09 14:03:17,604 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 09:04:01] 2026-01-09 14:03:17,608 | INFO     | did not find any defunct processes belonging to 22933
[2026-01-09 09:04:01] 2026-01-09 14:03:17,611 | INFO     | did not find any defunct processes belonging to 22933
[2026-01-09 09:04:01] 2026-01-09 14:03:17,612 | INFO     | ready for new job
[2026-01-09 09:04:01] 2026-01-09 14:03:17,612 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 09:04:01] 2026-01-09 14:03:17,613 | INFO     | ***************************************
[2026-01-09 09:04:01] 2026-01-09 14:03:17,613 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 09:04:01] 2026-01-09 14:03:17,614 | INFO     | ***************************************
[2026-01-09 09:04:01] 2026-01-09 14:03:17,614 | INFO     | 
[2026-01-09 09:04:01] 2026-01-09 14:03:17,614 | INFO     | architecture information:
[2026-01-09 09:04:01] 2026-01-09 14:03:17,615 | INFO     | executing command: cat /etc/os-release
[2026-01-09 09:04:01] 2026-01-09 14:03:17,629 | INFO     | cat /etc/os-release:
[2026-01-09 09:04:01] NAME="CentOS Linux"
[2026-01-09 09:04:01] VERSION="7 (Core)"
[2026-01-09 09:04:01] ID="centos"
[2026-01-09 09:04:01] ID_LIKE="rhel fedora"
[2026-01-09 09:04:01] VERSION_ID="7"
[2026-01-09 09:04:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 09:04:01] ANSI_COLOR="0;31"
[2026-01-09 09:04:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 09:04:01] HOME_URL="https://www.centos.org/"
[2026-01-09 09:04:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 09:04:01] 
[2026-01-09 09:04:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 09:04:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 09:04:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 09:04:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 09:04:01] 
[2026-01-09 09:04:01] 2026-01-09 14:03:17,629 | INFO     | ***************************************
[2026-01-09 09:04:01] 2026-01-09 14:03:18,132 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 09:04:01] 2026-01-09 14:03:18,148 | INFO     | sufficient remaining disk space (18660458496 B)
[2026-01-09 09:04:01] 2026-01-09 14:03:18,148 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 09:04:01] 2026-01-09 14:03:18,148 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 09:04:01] 2026-01-09 14:03:18,148 | INFO     | update_server=False
[2026-01-09 09:04:01] 2026-01-09 14:03:18,149 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 09:04:01] 2026-01-09 14:03:18,149 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 09:04:01] 2026-01-09 14:03:18,149 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 09:04:01] 2026-01-09 14:03:18,333 | INFO     | all data control threads have been joined
[2026-01-09 09:04:01] 2026-01-09 14:03:18,519 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 09:04:01] 2026-01-09 14:03:18,520 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 09:04:01] 2026-01-09 14:03:18,520 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 09:04:01] 2026-01-09 14:03:18,520 | INFO     | will abort loop
[2026-01-09 09:04:01] 2026-01-09 14:03:18,583 | INFO     | all job control threads have been joined
[2026-01-09 09:04:01] 2026-01-09 14:03:18,764 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 09:04:01] 2026-01-09 14:03:19,154 | INFO     | [job] retrieve thread has finished
[2026-01-09 09:04:01] 2026-01-09 14:03:19,155 | INFO     | [job] queue monitor thread has finished
[2026-01-09 09:04:01] 2026-01-09 14:03:19,159 | INFO     | [data] copytool_in thread has finished
[2026-01-09 09:04:01] 2026-01-09 14:03:19,277 | INFO     | all payload control threads have been joined
[2026-01-09 09:04:01] 2026-01-09 14:03:19,339 | INFO     | [data] control thread has finished
[2026-01-09 09:04:01] 2026-01-09 14:03:19,505 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 09:04:01] 2026-01-09 14:03:19,525 | INFO     | [job] job monitor thread has finished
[2026-01-09 09:04:01] 2026-01-09 14:03:19,579 | INFO     | [payload] validate_post thread has finished
[2026-01-09 09:04:01] 2026-01-09 14:03:19,588 | INFO     | [job] control thread has finished
[2026-01-09 09:04:01] 2026-01-09 14:03:19,901 | INFO     | [payload] failed_post thread has finished
[2026-01-09 09:04:01] 2026-01-09 14:03:20,282 | INFO     | [payload] control thread has finished
[2026-01-09 09:04:01] 2026-01-09 14:03:20,352 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 09:04:01] 2026-01-09 14:03:20,362 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 09:04:01] 2026-01-09 14:03:20,373 | INFO     | [job] validate thread has finished
[2026-01-09 09:04:01] 2026-01-09 14:03:20,405 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 09:04:01] 2026-01-09 14:03:20,768 | INFO     | [data] copytool_out thread has finished
[2026-01-09 09:04:01] 2026-01-09 14:03:22,155 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 09:04:01] 2026-01-09 14:03:48,529 | INFO     | PID=16503 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 09:04:01] 2026-01-09 14:03:48,530 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 09:04:01] 2026-01-09 14:03:48,530 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 09:04:01] 2026-01-09 14:03:48,530 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 09:04:01] 2026-01-09 14:03:54,988 | INFO     | [monitor] cgroup control has ended
[2026-01-09 09:04:01] 2026-01-09 14:03:56,496 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140371989399360)>', '<ExcThread(monitor, started 140371292034816)>']
[2026-01-09 09:04:01] 2026-01-09 14:03:56,568 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 09:04:01] 2026-01-09 14:03:56,568 | INFO     | [monitor] control thread has ended
[2026-01-09 09:04:01] 2026-01-09 14:04:01,521 | INFO     | all workflow threads have been joined
[2026-01-09 09:04:01] 2026-01-09 14:04:01,521 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 09:04:01] 2026-01-09 14:04:01,522 | INFO     | traces error code: 0
[2026-01-09 09:04:01] 2026-01-09 14:04:01,522 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 09:04:01] 2026-01-09 14:04:01,604 [wrapper] ==== pilot stdout END ====
[2026-01-09 09:04:01] 2026-01-09 14:04:01,608 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 09:04:01] 2026-01-09 14:04:01,612 [wrapper] pilotpid: 16503
[2026-01-09 09:04:01] 2026-01-09 14:04:01,616 [wrapper] Pilot exit status: 0
[2026-01-09 09:04:01] 2026-01-09 14:04:01,630 [wrapper] pandaids: 6963161908
[2026-01-09 09:04:01] 2026-01-09 14:04:01,668 [wrapper] cleanup supervisor_pilot  1605 16504
[2026-01-09 09:04:01] 2026-01-09 14:04:01,672 [wrapper] Test setup, not cleaning
[2026-01-09 09:04:01] 2026-01-09 14:04:01,676 [wrapper] apfmon messages muted
[2026-01-09 09:04:01] 2026-01-09 14:04:01,679 [wrapper] ==== wrapper stdout END ====
[2026-01-09 09:04:01] 2026-01-09 14:04:01,683 [wrapper] ==== wrapper stderr END ====
[2026-01-09 09:04:01]  *** Error codes and diagnostics ***
[2026-01-09 09:04:01]     "exeErrorCode": 0,
[2026-01-09 09:04:01]     "exeErrorDiag": "",
[2026-01-09 09:04:01]     "pilotErrorCode": 0,
[2026-01-09 09:04:01]     "pilotErrorDiag": "",
[2026-01-09 09:04:01]  *** Listing of results directory ***
[2026-01-09 09:04:01] total 433964
[2026-01-09 09:04:01] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 16:44 pilot3.tar.gz
[2026-01-09 09:04:01] -rwx------ 1 boincer umatlas     36322 Jan  8 16:46 runpilot2-wrapper.sh
[2026-01-09 09:04:01] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 16:47 queuedata.json
[2026-01-09 09:04:01] -rw-r--r-- 1 boincer umatlas       100 Jan  9 07:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 09:04:01] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 07:30 run_atlas
[2026-01-09 09:04:01] -rw-r--r-- 1 boincer umatlas       105 Jan  9 07:30 job.xml
[2026-01-09 09:04:01] -rw-r--r-- 2 boincer umatlas 225561504 Jan  9 07:30 EVNT.47898824._001231.pool.root.1
[2026-01-09 09:04:01] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 07:30 start_atlas.sh
[2026-01-09 09:04:01] drwxrwx--x 2 boincer umatlas      4096 Jan  9 07:30 shared
[2026-01-09 09:04:01] -rw-r--r-- 2 boincer umatlas    592393 Jan  9 07:30 input.tar.gz
[2026-01-09 09:04:01] -rw-r--r-- 1 boincer umatlas         0 Jan  9 07:30 boinc_lockfile
[2026-01-09 09:04:01] -rw-r--r-- 1 boincer umatlas      2519 Jan  9 07:30 pandaJob.out
[2026-01-09 09:04:01] -rw------- 1 boincer umatlas        57 Jan  9 07:30 setup.sh.local
[2026-01-09 09:04:01] -rw------- 1 boincer umatlas    989377 Jan  9 07:30 agis_schedconf.cvmfs.json
[2026-01-09 09:04:01] -rw------- 1 boincer umatlas   1516240 Jan  9 07:30 agis_ddmendpoints.agis.ALL.json
[2026-01-09 09:04:01] drwx------ 5 boincer umatlas      4096 Jan  9 07:30 pilot3
[2026-01-09 09:04:01] -rw-r--r-- 1 boincer umatlas      5952 Jan  9 09:00 init_data.xml
[2026-01-09 09:04:01] -rw------- 1 boincer umatlas 212504739 Jan  9 09:02 HITS.47898826._033565.pool.root.1
[2026-01-09 09:04:01] -rw------- 1 boincer umatlas        95 Jan  9 09:02 pilot_heartbeat.json
[2026-01-09 09:04:01] -rw------- 1 boincer umatlas      1047 Jan  9 09:03 memory_monitor_summary.json
[2026-01-09 09:04:01] -rw------- 1 boincer umatlas    401785 Jan  9 09:03 log.47898826._033565.job.log.tgz.1
[2026-01-09 09:04:01] -rw-r--r-- 1 boincer umatlas       530 Jan  9 09:03 boinc_task_state.xml
[2026-01-09 09:04:01] -rw------- 1 boincer umatlas      7847 Jan  9 09:03 heartbeat.json
[2026-01-09 09:04:01] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 09:03 boinc_mmap_file
[2026-01-09 09:04:01] -rw-r--r-- 1 boincer umatlas        27 Jan  9 09:03 wrapper_checkpoint.txt
[2026-01-09 09:04:01] -rw------- 1 boincer umatlas      4932 Jan  9 09:04 pilotlog.txt
[2026-01-09 09:04:01] -rw------- 1 boincer umatlas    794560 Jan  9 09:04 log.47898826._033565.job.log.1
[2026-01-09 09:04:01] -rw------- 1 boincer umatlas       357 Jan  9 09:04 output.list
[2026-01-09 09:04:01] -rw-r--r-- 1 boincer umatlas       620 Jan  9 09:04 runtime_log
[2026-01-09 09:04:01] -rw------- 1 boincer umatlas   1218560 Jan  9 09:04 result.tar.gz
[2026-01-09 09:04:01] -rw------- 1 boincer umatlas       659 Jan  9 09:04 ICoNDmS1Cy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm4JgKDmHlxUDm.diag
[2026-01-09 09:04:01] -rw-r--r-- 1 boincer umatlas      9344 Jan  9 09:04 runtime_log.err
[2026-01-09 09:04:01] -rw-r--r-- 1 boincer umatlas     21857 Jan  9 09:04 stderr.txt
[2026-01-09 09:04:01] HITS file was successfully produced:
[2026-01-09 09:04:01] -rw------- 1 boincer umatlas 212504739 Jan  9 09:02 shared/HITS.pool.root.1
[2026-01-09 09:04:01]  *** Contents of shared directory: ***
[2026-01-09 09:04:01] total 429596
[2026-01-09 09:04:01] -rw-r--r-- 2 boincer umatlas 225561504 Jan  9 07:30 ATLAS.root_0
[2026-01-09 09:04:01] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 07:30 start_atlas.sh
[2026-01-09 09:04:01] -rw-r--r-- 2 boincer umatlas    592393 Jan  9 07:30 input.tar.gz
[2026-01-09 09:04:01] -rw------- 1 boincer umatlas 212504739 Jan  9 09:02 HITS.pool.root.1
[2026-01-09 09:04:01] -rw------- 1 boincer umatlas   1218560 Jan  9 09:04 result.tar.gz
09:04:03 (12739): run_atlas exited; CPU time 60063.927981
09:04:03 (12739): called boinc_finish(0)

</stderr_txt>
]]>

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