Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:22:34 (3622): wrapper (7.7.26015): starting
07:22:34 (3622): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 07:22:34] Arguments: --nthreads 12
[2026-01-09 07:22:34] Threads: 12
[2026-01-09 07:22:34] Checking for CVMFS
[2026-01-09 07:22:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 07:22:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 07:22:35] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 07:22:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 07:22:35] 2.11.2.0 2987 350990 95988 154942 0 59 16772993 20275201 1 130560 1 148037047 99.949 21540321 15808 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 07:22:35] CVMFS is ok
[2026-01-09 07:22:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 07:22:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 07:22:35] Further information can be found at the LHC@home message board.
[2026-01-09 07:22:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 07:22:35] Checking for apptainer binary...
[2026-01-09 07:22:35] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 07:22:35] Running /usr/bin/apptainer --version
[2026-01-09 07:22:35] apptainer version 1.3.2-1.el7
[2026-01-09 07:22:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 07:22:36] c-205-19.aglt2.org
[2026-01-09 07:22:36] apptainer works
[2026-01-09 07:22:36] Set ATHENA_PROC_NUMBER=12
[2026-01-09 07:22:36] Set ATHENA_CORE_NUMBER=12
[2026-01-09 07:22:36] Starting ATLAS job with PandaID=6963803100
[2026-01-09 07:22:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 09:03:06]  *** The last 200 lines of the pilot log: ***
[2026-01-09 09:03:06]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-09 09:03:06]  replicas=None
[2026-01-09 09:03:06]  scope=mc23_13p6TeV
[2026-01-09 09:03:06]  status=None
[2026-01-09 09:03:06]  status_code=0
[2026-01-09 09:03:06]  storage_token=
[2026-01-09 09:03:06]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6963803100/log.47898826._039819.job.log.tgz.1
[2026-01-09 09:03:06]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e1/c0/log.47898826._039819.job.log.tgz.1
[2026-01-09 09:03:06]  workdir=None
[2026-01-09 09:03:06] ]
[2026-01-09 09:03:06] 2026-01-09 14:02:26,035 | INFO     | transferring file log.47898826._039819.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6963803100/log.47898826._039819.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-09 09:03:06] 2026-01-09 14:02:26,035 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6963803100/log.47898826._039819.job.log.tgz.1 /tmp/boinchome/slots/0/log.47898826._039819.job
[2026-01-09 09:03:06] 2026-01-09 14:02:26,057 | INFO     | adding to output.list: log.47898826._039819.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e1/c0/log.47898826._039819.job.log.tg
[2026-01-09 09:03:06] 2026-01-09 14:02:26,058 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-09 09:03:06] 2026-01-09 14:02:26,058 | INFO     | summary of transferred files:
[2026-01-09 09:03:06] 2026-01-09 14:02:26,058 | INFO     |  -- lfn=log.47898826._039819.job.log.tgz.1, status_code=0, status=transferred
[2026-01-09 09:03:06] 2026-01-09 14:02:26,059 | INFO     | stage-out finished correctly
[2026-01-09 09:03:06] 2026-01-09 14:02:26,142 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-09 09:03:06] 2026-01-09 14:02:26,743 | INFO     | job 6963803100 has state=finished
[2026-01-09 09:03:06] 2026-01-09 14:02:26,743 | INFO     | preparing for final server update for job 6963803100 in state='finished'
[2026-01-09 09:03:06] 2026-01-09 14:02:26,744 | INFO     | this job has now completed (state=finished)
[2026-01-09 09:03:06] 2026-01-09 14:02:26,744 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-09 09:03:06] 2026-01-09 14:02:26,744 | INFO     | log transfer has been attempted: DONE
[2026-01-09 09:03:06] 2026-01-09 14:02:26,744 | INFO     | job 6963803100 has finished - writing final server update
[2026-01-09 09:03:06] 2026-01-09 14:02:26,745 | INFO     | total number of processed events: 400 (read)
[2026-01-09 09:03:06] 2026-01-09 14:02:26,746 | INFO     | executing command: lscpu
[2026-01-09 09:03:06] 2026-01-09 14:02:26,772 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 09:03:06] 2026-01-09 14:02:26,912 | INFO     | monitor loop #442: job 0:6963803100 is in state 'finished'
[2026-01-09 09:03:06] 2026-01-09 14:02:26,912 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 09:03:06] 2026-01-09 14:02:27,264 | INFO     | time since job start (5975s) is within the limit (349056.0s)
[2026-01-09 09:03:06] 2026-01-09 14:02:29,269 | INFO     | time since job start (5977s) is within the limit (349056.0s)
[2026-01-09 09:03:06] 2026-01-09 14:02:29,415 | INFO     | monitor loop #443: job 0:6963803100 is in state 'finished'
[2026-01-09 09:03:06] 2026-01-09 14:02:29,415 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 09:03:06] 2026-01-09 14:02:30,392 | INFO     | PID=7308 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 09:03:06] 2026-01-09 14:02:31,392 | INFO     | time since job start (5979s) is within the limit (349056.0s)
[2026-01-09 09:03:06] 2026-01-09 14:02:31,918 | INFO     | monitor loop #444: job 0:6963803100 is in state 'finished'
[2026-01-09 09:03:06] 2026-01-09 14:02:31,918 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 09:03:06] 2026-01-09 14:02:32,539 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 09:03:06] 2026-01-09 14:02:32,543 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1718.0
[2026-01-09 09:03:06] 2026-01-09 14:02:32,546 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963803100/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 09:03:06] 2026-01-09 14:02:32,546 | INFO     | extracted standard info from prmon json
[2026-01-09 09:03:06] 2026-01-09 14:02:32,547 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 09:03:06] 2026-01-09 14:02:32,547 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 09:03:06] 2026-01-09 14:02:32,547 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 09:03:06] 2026-01-09 14:02:32,547 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 09:03:06] 2026-01-09 14:02:32,549 | INFO     | fitting pss+swap vs Time
[2026-01-09 09:03:06] 2026-01-09 14:02:32,549 | INFO     | sum of square deviations: 233641590.0
[2026-01-09 09:03:06] 2026-01-09 14:02:32,550 | INFO     | sum of deviations: -3361952535.9999995
[2026-01-09 09:03:06] 2026-01-09 14:02:32,550 | INFO     | mean x: 1767964451.0
[2026-01-09 09:03:06] 2026-01-09 14:02:32,550 | INFO     | mean y: 2702734.3626373624
[2026-01-09 09:03:06] 2026-01-09 14:02:32,550 | INFO     | intersect: 25442576558.185257
[2026-01-09 09:03:06] 2026-01-09 14:02:32,550 | INFO     | chi2: 0.06737271800482587
[2026-01-09 09:03:06] 2026-01-09 14:02:32,550 | INFO     | current memory leak: -14.39 B/s (using 91 data points, chi2=0.07)
[2026-01-09 09:03:06] 2026-01-09 14:02:32,551 | INFO     | could have reported an average CPU frequency of 2139 MHz (7 samples)
[2026-01-09 09:03:06] 2026-01-09 14:02:32,551 | INFO     | ..............................
[2026-01-09 09:03:06] 2026-01-09 14:02:32,551 | INFO     | . Timing measurements:
[2026-01-09 09:03:06] 2026-01-09 14:02:32,551 | INFO     | . get job = 0 s
[2026-01-09 09:03:06] 2026-01-09 14:02:32,551 | INFO     | . initial setup = 2 s
[2026-01-09 09:03:06] 2026-01-09 14:02:32,551 | INFO     | . payload setup = 7 s
[2026-01-09 09:03:06] 2026-01-09 14:02:32,551 | INFO     | . stage-in = 0 s
[2026-01-09 09:03:06] 2026-01-09 14:02:32,551 | INFO     | . payload execution = 5946 s
[2026-01-09 09:03:06] 2026-01-09 14:02:32,551 | INFO     | . stage-out = 0 s
[2026-01-09 09:03:06] 2026-01-09 14:02:32,552 | INFO     | . log creation = 0 s
[2026-01-09 09:03:06] 2026-01-09 14:02:32,552 | INFO     | ..............................
[2026-01-09 09:03:06] 2026-01-09 14:02:32,632 | INFO     | 
[2026-01-09 09:03:06] 2026-01-09 14:02:32,633 | INFO     | job summary report
[2026-01-09 09:03:06] 2026-01-09 14:02:32,633 | INFO     | --------------------------------------------------
[2026-01-09 09:03:06] 2026-01-09 14:02:32,633 | INFO     | PanDA job id: 6963803100
[2026-01-09 09:03:06] 2026-01-09 14:02:32,633 | INFO     | task id: 47898826
[2026-01-09 09:03:06] 2026-01-09 14:02:32,633 | INFO     | errors: (none)
[2026-01-09 09:03:06] 2026-01-09 14:02:32,633 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 09:03:06] 2026-01-09 14:02:32,634 | INFO     | pilot state: finished 
[2026-01-09 09:03:06] 2026-01-09 14:02:32,634 | INFO     | transexitcode: 0
[2026-01-09 09:03:06] 2026-01-09 14:02:32,634 | INFO     | exeerrorcode: 0
[2026-01-09 09:03:06] 2026-01-09 14:02:32,634 | INFO     | exeerrordiag: 
[2026-01-09 09:03:06] 2026-01-09 14:02:32,634 | INFO     | exitcode: 0
[2026-01-09 09:03:06] 2026-01-09 14:02:32,634 | INFO     | exitmsg: OK
[2026-01-09 09:03:06] 2026-01-09 14:02:32,635 | INFO     | cpuconsumptiontime: 65835 s
[2026-01-09 09:03:06] 2026-01-09 14:02:32,635 | INFO     | nevents: 400
[2026-01-09 09:03:06] 2026-01-09 14:02:32,635 | INFO     | neventsw: 0
[2026-01-09 09:03:06] 2026-01-09 14:02:32,635 | INFO     | pid: 13855
[2026-01-09 09:03:06] 2026-01-09 14:02:32,635 | INFO     | pgrp: 13855
[2026-01-09 09:03:06] 2026-01-09 14:02:32,635 | INFO     | corecount: 12
[2026-01-09 09:03:06] 2026-01-09 14:02:32,636 | INFO     | event service: False
[2026-01-09 09:03:06] 2026-01-09 14:02:32,636 | INFO     | sizes: {0: 2283748, 1: 2283947, 6: 2284209, 11: 2284237, 5957: 2310960, 5958: 2320142, 5965: 2320280}
[2026-01-09 09:03:06] 2026-01-09 14:02:32,636 | INFO     | --------------------------------------------------
[2026-01-09 09:03:06] 2026-01-09 14:02:32,636 | INFO     | 
[2026-01-09 09:03:06] 2026-01-09 14:02:32,636 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 09:03:06] 2026-01-09 14:02:32,657 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 09:03:06] 2026-01-09 14:02:32,658 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 09:03:06] 2026-01-09 14:02:32,658 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 09:03:06] 2026-01-09 14:02:32,658 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 09:03:06] 2026-01-09 14:02:32,658 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 09:03:06] 2026-01-09 14:02:32,658 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 09:03:06] 2026-01-09 14:02:32,659 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 09:03:06] 2026-01-09 14:02:32,659 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 09:03:06] 2026-01-09 14:02:32,659 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 09:03:06] 2026-01-09 14:02:32,659 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 09:03:06] 2026-01-09 14:02:32,659 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 09:03:06] 2026-01-09 14:02:32,659 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 09:03:06] 2026-01-09 14:02:32,660 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 09:03:06] 2026-01-09 14:02:32,660 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 09:03:06] 2026-01-09 14:02:32,660 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 09:03:06] 2026-01-09 14:02:32,660 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 09:03:06] 2026-01-09 14:02:32,660 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 09:03:06] 2026-01-09 14:02:32,660 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 09:03:06] 2026-01-09 14:02:32,661 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 09:03:06] 2026-01-09 14:02:32,661 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 09:03:06] 2026-01-09 14:02:32,661 | INFO     | job 6963803100 has completed (purged errors)
[2026-01-09 09:03:06] 2026-01-09 14:02:32,661 | INFO     | overall cleanup function is called
[2026-01-09 09:03:06] 2026-01-09 14:02:33,670 | INFO     | --- collectZombieJob: --- 10, [13855]
[2026-01-09 09:03:06] 2026-01-09 14:02:33,670 | INFO     | zombie collector waiting for pid 13855
[2026-01-09 09:03:06] 2026-01-09 14:02:33,670 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 09:03:06] 2026-01-09 14:02:33,670 | INFO     | collected zombie processes
[2026-01-09 09:03:06] 2026-01-09 14:02:33,670 | INFO     | will attempt to kill all subprocesses of pid=13855
[2026-01-09 09:03:06] 2026-01-09 14:02:33,766 | INFO     | process IDs to be killed: [13855] (in reverse order)
[2026-01-09 09:03:06] 2026-01-09 14:02:33,819 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 09:03:06] 2026-01-09 14:02:33,819 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 09:03:06] 2026-01-09 14:02:33,823 | INFO     | did not find any defunct processes belonging to 13855
[2026-01-09 09:03:06] 2026-01-09 14:02:33,827 | INFO     | did not find any defunct processes belonging to 13855
[2026-01-09 09:03:06] 2026-01-09 14:02:33,827 | INFO     | ready for new job
[2026-01-09 09:03:06] 2026-01-09 14:02:33,827 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 09:03:06] 2026-01-09 14:02:33,828 | INFO     | ***************************************
[2026-01-09 09:03:06] 2026-01-09 14:02:33,828 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 09:03:06] 2026-01-09 14:02:33,828 | INFO     | ***************************************
[2026-01-09 09:03:06] 2026-01-09 14:02:33,828 | INFO     | 
[2026-01-09 09:03:06] 2026-01-09 14:02:33,829 | INFO     | architecture information:
[2026-01-09 09:03:06] 2026-01-09 14:02:33,829 | INFO     | executing command: cat /etc/os-release
[2026-01-09 09:03:06] 2026-01-09 14:02:33,843 | INFO     | cat /etc/os-release:
[2026-01-09 09:03:06] NAME="CentOS Linux"
[2026-01-09 09:03:06] VERSION="7 (Core)"
[2026-01-09 09:03:06] ID="centos"
[2026-01-09 09:03:06] ID_LIKE="rhel fedora"
[2026-01-09 09:03:06] VERSION_ID="7"
[2026-01-09 09:03:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 09:03:06] ANSI_COLOR="0;31"
[2026-01-09 09:03:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 09:03:06] HOME_URL="https://www.centos.org/"
[2026-01-09 09:03:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 09:03:06] 
[2026-01-09 09:03:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 09:03:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 09:03:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 09:03:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 09:03:06] 
[2026-01-09 09:03:06] 2026-01-09 14:02:33,843 | INFO     | ***************************************
[2026-01-09 09:03:06] 2026-01-09 14:02:34,346 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 09:03:06] 2026-01-09 14:02:34,363 | INFO     | sufficient remaining disk space (29319233536 B)
[2026-01-09 09:03:06] 2026-01-09 14:02:34,363 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 09:03:06] 2026-01-09 14:02:34,363 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 09:03:06] 2026-01-09 14:02:34,363 | INFO     | update_server=False
[2026-01-09 09:03:06] 2026-01-09 14:02:34,364 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 09:03:06] 2026-01-09 14:02:34,364 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 09:03:06] 2026-01-09 14:02:34,364 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 09:03:06] 2026-01-09 14:02:34,421 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 09:03:06] 2026-01-09 14:02:34,421 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 09:03:06] 2026-01-09 14:02:34,422 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 09:03:06] 2026-01-09 14:02:34,422 | INFO     | will abort loop
[2026-01-09 09:03:06] 2026-01-09 14:02:34,517 | INFO     | all data control threads have been joined
[2026-01-09 09:03:06] 2026-01-09 14:02:34,773 | INFO     | all payload control threads have been joined
[2026-01-09 09:03:06] 2026-01-09 14:02:34,829 | INFO     | all job control threads have been joined
[2026-01-09 09:03:06] 2026-01-09 14:02:35,369 | INFO     | [job] retrieve thread has finished
[2026-01-09 09:03:06] 2026-01-09 14:02:35,370 | INFO     | [job] queue monitor thread has finished
[2026-01-09 09:03:06] 2026-01-09 14:02:35,427 | INFO     | [job] job monitor thread has finished
[2026-01-09 09:03:06] 2026-01-09 14:02:35,440 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 09:03:06] 2026-01-09 14:02:35,440 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 09:03:06] 2026-01-09 14:02:35,441 | INFO     | [job] validate thread has finished
[2026-01-09 09:03:06] 2026-01-09 14:02:35,523 | INFO     | [data] control thread has finished
[2026-01-09 09:03:06] 2026-01-09 14:02:35,607 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 09:03:06] 2026-01-09 14:02:35,779 | INFO     | [payload] control thread has finished
[2026-01-09 09:03:06] 2026-01-09 14:02:35,834 | INFO     | [job] control thread has finished
[2026-01-09 09:03:06] 2026-01-09 14:02:35,870 | INFO     | [payload] validate_post thread has finished
[2026-01-09 09:03:06] 2026-01-09 14:02:35,896 | INFO     | [data] copytool_in thread has finished
[2026-01-09 09:03:06] 2026-01-09 14:02:36,267 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 09:03:06] 2026-01-09 14:02:36,370 | INFO     | [data] copytool_out thread has finished
[2026-01-09 09:03:06] 2026-01-09 14:02:36,730 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 09:03:06] 2026-01-09 14:02:36,906 | INFO     | [payload] failed_post thread has finished
[2026-01-09 09:03:06] 2026-01-09 14:02:40,736 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 09:03:06] 2026-01-09 14:03:01,050 | INFO     | [monitor] cgroup control has ended
[2026-01-09 09:03:06] 2026-01-09 14:03:01,130 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140252065961792)>', '<ExcThread(monitor, started 140251402065664)>']
[2026-01-09 09:03:06] 2026-01-09 14:03:04,601 | INFO     | PID=7308 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 09:03:06] 2026-01-09 14:03:04,602 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 09:03:06] 2026-01-09 14:03:04,602 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 09:03:06] 2026-01-09 14:03:04,602 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 09:03:06] 2026-01-09 14:03:04,602 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 09:03:06] 2026-01-09 14:03:04,602 | INFO     | [monitor] control thread has ended
[2026-01-09 09:03:06] 2026-01-09 14:03:06,138 | INFO     | all workflow threads have been joined
[2026-01-09 09:03:06] 2026-01-09 14:03:06,142 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 09:03:06] 2026-01-09 14:03:06,143 | INFO     | traces error code: 0
[2026-01-09 09:03:06] 2026-01-09 14:03:06,143 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 09:03:06] 2026-01-09 14:03:06,239 [wrapper] ==== pilot stdout END ====
[2026-01-09 09:03:06] 2026-01-09 14:03:06,242 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 09:03:06] 2026-01-09 14:03:06,246 [wrapper] pilotpid: 7308
[2026-01-09 09:03:06] 2026-01-09 14:03:06,249 [wrapper] Pilot exit status: 0
[2026-01-09 09:03:06] 2026-01-09 14:03:06,266 [wrapper] pandaids: 6963803100
[2026-01-09 09:03:06] 2026-01-09 14:03:06,308 [wrapper] cleanup supervisor_pilot 13237 7309
[2026-01-09 09:03:06] 2026-01-09 14:03:06,312 [wrapper] Test setup, not cleaning
[2026-01-09 09:03:06] 2026-01-09 14:03:06,315 [wrapper] apfmon messages muted
[2026-01-09 09:03:06] 2026-01-09 14:03:06,319 [wrapper] ==== wrapper stdout END ====
[2026-01-09 09:03:06] 2026-01-09 14:03:06,323 [wrapper] ==== wrapper stderr END ====
[2026-01-09 09:03:06]  *** Error codes and diagnostics ***
[2026-01-09 09:03:06]     "exeErrorCode": 0,
[2026-01-09 09:03:06]     "exeErrorDiag": "",
[2026-01-09 09:03:06]     "pilotErrorCode": 0,
[2026-01-09 09:03:06]     "pilotErrorDiag": "",
[2026-01-09 09:03:06]  *** Listing of results directory ***
[2026-01-09 09:03:06] total 437272
[2026-01-09 09:03:06] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-09 09:03:06] -rwx------ 1 boincer umatlas     36322 Jan  8 23:26 runpilot2-wrapper.sh
[2026-01-09 09:03:06] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 23:32 queuedata.json
[2026-01-09 09:03:06] -rw-r--r-- 1 boincer umatlas       100 Jan  9 07:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 09:03:06] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 07:22 run_atlas
[2026-01-09 09:03:06] -rw-r--r-- 1 boincer umatlas       105 Jan  9 07:22 job.xml
[2026-01-09 09:03:06] -rw-r--r-- 2 boincer umatlas 223194728 Jan  9 07:22 EVNT.47898824._000719.pool.root.1
[2026-01-09 09:03:06] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 07:22 start_atlas.sh
[2026-01-09 09:03:06] drwxrwx--x 2 boincer umatlas      4096 Jan  9 07:22 shared
[2026-01-09 09:03:06] -rw-r--r-- 2 boincer umatlas    592405 Jan  9 07:22 input.tar.gz
[2026-01-09 09:03:06] -rw-r--r-- 1 boincer umatlas         0 Jan  9 07:22 boinc_lockfile
[2026-01-09 09:03:06] -rw-r--r-- 1 boincer umatlas      2519 Jan  9 07:22 pandaJob.out
[2026-01-09 09:03:06] -rw------- 1 boincer umatlas        57 Jan  9 07:22 setup.sh.local
[2026-01-09 09:03:06] -rw------- 1 boincer umatlas    989377 Jan  9 07:22 agis_schedconf.cvmfs.json
[2026-01-09 09:03:06] -rw------- 1 boincer umatlas   1516240 Jan  9 07:22 agis_ddmendpoints.agis.ALL.json
[2026-01-09 09:03:06] drwx------ 5 boincer umatlas      4096 Jan  9 07:22 pilot3
[2026-01-09 09:03:06] -rw-r--r-- 1 boincer umatlas      5952 Jan  9 08:56 init_data.xml
[2026-01-09 09:03:06] -rw------- 1 boincer umatlas 218132183 Jan  9 09:01 HITS.47898826._039819.pool.root.1
[2026-01-09 09:03:06] -rw-r--r-- 1 boincer umatlas       529 Jan  9 09:02 boinc_task_state.xml
[2026-01-09 09:03:06] -rw------- 1 boincer umatlas        95 Jan  9 09:02 pilot_heartbeat.json
[2026-01-09 09:03:06] -rw------- 1 boincer umatlas      1045 Jan  9 09:02 memory_monitor_summary.json
[2026-01-09 09:03:06] -rw------- 1 boincer umatlas    414906 Jan  9 09:02 log.47898826._039819.job.log.tgz.1
[2026-01-09 09:03:06] -rw------- 1 boincer umatlas      7847 Jan  9 09:02 heartbeat.json
[2026-01-09 09:03:06] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 09:02 boinc_mmap_file
[2026-01-09 09:03:06] -rw-r--r-- 1 boincer umatlas        27 Jan  9 09:02 wrapper_checkpoint.txt
[2026-01-09 09:03:06] -rw------- 1 boincer umatlas      4931 Jan  9 09:03 pilotlog.txt
[2026-01-09 09:03:06] -rw------- 1 boincer umatlas    850518 Jan  9 09:03 log.47898826._039819.job.log.1
[2026-01-09 09:03:06] -rw------- 1 boincer umatlas       357 Jan  9 09:03 output.list
[2026-01-09 09:03:06] -rw-r--r-- 1 boincer umatlas       620 Jan  9 09:03 runtime_log
[2026-01-09 09:03:06] -rw------- 1 boincer umatlas   1280000 Jan  9 09:03 result.tar.gz
[2026-01-09 09:03:06] -rw------- 1 boincer umatlas       659 Jan  9 09:03 UnHODmxFJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm1EhKDmmvG9Bn.diag
[2026-01-09 09:03:06] -rw-r--r-- 1 boincer umatlas      9344 Jan  9 09:03 runtime_log.err
[2026-01-09 09:03:06] -rw-r--r-- 1 boincer umatlas     22011 Jan  9 09:03 stderr.txt
[2026-01-09 09:03:06] HITS file was successfully produced:
[2026-01-09 09:03:06] -rw------- 1 boincer umatlas 218132183 Jan  9 09:01 shared/HITS.pool.root.1
[2026-01-09 09:03:06]  *** Contents of shared directory: ***
[2026-01-09 09:03:06] total 432836
[2026-01-09 09:03:06] -rw-r--r-- 2 boincer umatlas 223194728 Jan  9 07:22 ATLAS.root_0
[2026-01-09 09:03:06] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 07:22 start_atlas.sh
[2026-01-09 09:03:06] -rw-r--r-- 2 boincer umatlas    592405 Jan  9 07:22 input.tar.gz
[2026-01-09 09:03:06] -rw------- 1 boincer umatlas 218132183 Jan  9 09:01 HITS.pool.root.1
[2026-01-09 09:03:06] -rw------- 1 boincer umatlas   1280000 Jan  9 09:03 result.tar.gz
09:03:08 (3622): run_atlas exited; CPU time 65824.993293
09:03:08 (3622): called boinc_finish(0)

</stderr_txt>
]]>

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