Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:53:55 (3408073): wrapper (7.7.26015): starting
07:53:55 (3408073): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 07:53:55] Arguments: --nthreads 8
[2026-01-09 07:53:55] Threads: 8
[2026-01-09 07:53:55] Checking for CVMFS
[2026-01-09 07:53:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 07:53:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 07:53:56] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 07:53:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 07:53:57] 2.13.3.0 11754 93390 223056 154944 2 177 28914115 32935937 23407 16776704 0 485211811 99.518 635834086 17646 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 07:53:57] CVMFS is ok
[2026-01-09 07:53:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 07:53:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 07:53:57] Further information can be found at the LHC@home message board.
[2026-01-09 07:53:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 07:53:57] Checking for apptainer binary...
[2026-01-09 07:54:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 07:54:17] Running /usr/bin/apptainer --version
[2026-01-09 07:54:17] apptainer version 1.4.5-2.el9
[2026-01-09 07:54:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 07:54:18] c7-2-38.aglt2.org
[2026-01-09 07:54:18] apptainer works
[2026-01-09 07:54:18] Set ATHENA_PROC_NUMBER=8
[2026-01-09 07:54:18] Set ATHENA_CORE_NUMBER=8
[2026-01-09 07:54:18] Starting ATLAS job with PandaID=6963194310
[2026-01-09 07:54:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 16:33:14]  *** The last 200 lines of the pilot log: ***
[2026-01-09 16:33:14] 2026-01-09 21:32:07,821 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3356.178552083333
[2026-01-09 16:33:14] 2026-01-09 21:32:07,844 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6963194310/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 16:33:14] 2026-01-09 21:32:07,845 | INFO     | extracted standard info from prmon json
[2026-01-09 16:33:14] 2026-01-09 21:32:07,845 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 16:33:14] 2026-01-09 21:32:07,845 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 16:33:14] 2026-01-09 21:32:07,845 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 16:33:14] 2026-01-09 21:32:07,845 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 16:33:14] 2026-01-09 21:32:07,851 | INFO     | fitting pss+swap vs Time
[2026-01-09 16:33:14] 2026-01-09 21:32:07,852 | INFO     | sum of square deviations: 40410819418.66648
[2026-01-09 16:33:14] 2026-01-09 21:32:07,856 | INFO     | sum of deviations: 193429674511.4358
[2026-01-09 16:33:14] 2026-01-09 21:32:07,856 | INFO     | mean x: 1767978830.1794872
[2026-01-09 16:33:14] 2026-01-09 21:32:07,856 | INFO     | mean y: 2515672.7534516766
[2026-01-09 16:33:14] 2026-01-09 21:32:07,856 | INFO     | intersect: -8460058820.521009
[2026-01-09 16:33:14] 2026-01-09 21:32:07,857 | INFO     | chi2: 2.6726678668224646
[2026-01-09 16:33:14] 2026-01-09 21:32:07,857 | INFO     | sum of square deviations: 39226939865.720795
[2026-01-09 16:33:14] 2026-01-09 21:32:07,861 | INFO     | sum of deviations: 190823163539.41837
[2026-01-09 16:33:14] 2026-01-09 21:32:07,862 | INFO     | mean x: 1767978677.677291
[2026-01-09 16:33:14] 2026-01-09 21:32:07,862 | INFO     | mean y: 2515336.984063745
[2026-01-09 16:33:14] 2026-01-09 21:32:07,862 | INFO     | intersect: -8597984357.855415
[2026-01-09 16:33:14] 2026-01-09 21:32:07,862 | INFO     | chi2: 2.6729933985141807
[2026-01-09 16:33:14] 2026-01-09 21:32:07,862 | INFO     | current chi2=2.6729933985141807 (change=-0.012180027894866845 %)
[2026-01-09 16:33:14] 2026-01-09 21:32:07,862 | INFO     | right removable region: 501
[2026-01-09 16:33:14] 2026-01-09 21:32:07,863 | INFO     | sum of square deviations: 39226946211.004074
[2026-01-09 16:33:14] 2026-01-09 21:32:07,867 | INFO     | sum of deviations: 65872491911.753006
[2026-01-09 16:33:14] 2026-01-09 21:32:07,867 | INFO     | mean x: 1767978982.681275
[2026-01-09 16:33:14] 2026-01-09 21:32:07,867 | INFO     | mean y: 2532071.760956175
[2026-01-09 16:33:14] 2026-01-09 21:32:07,867 | INFO     | intersect: -2966375592.128299
[2026-01-09 16:33:14] 2026-01-09 21:32:07,868 | INFO     | chi2: 0.2026503889647243
[2026-01-09 16:33:14] 2026-01-09 21:32:07,868 | INFO     | current chi2=0.2026503889647243 (change=92.41767405967823 %)
[2026-01-09 16:33:14] 2026-01-09 21:32:07,868 | INFO     | sum of square deviations: 38066422278.33811
[2026-01-09 16:33:14] 2026-01-09 21:32:07,872 | INFO     | sum of deviations: 45132188799.098564
[2026-01-09 16:33:14] 2026-01-09 21:32:07,872 | INFO     | mean x: 1767979135.1830986
[2026-01-09 16:33:14] 2026-01-09 21:32:07,873 | INFO     | mean y: 2534789.9879275654
[2026-01-09 16:33:14] 2026-01-09 21:32:07,873 | INFO     | intersect: -2093610929.6836865
[2026-01-09 16:33:14] 2026-01-09 21:32:07,873 | INFO     | chi2: 0.1378539150990771
[2026-01-09 16:33:14] 2026-01-09 21:32:07,873 | INFO     | current chi2=0.1378539150990771 (change=31.9745124579684 %)
[2026-01-09 16:33:14] 2026-01-09 21:32:07,874 | INFO     | sum of square deviations: 36929015058.1688
[2026-01-09 16:33:14] 2026-01-09 21:32:07,878 | INFO     | sum of deviations: 55246754195.70934
[2026-01-09 16:33:14] 2026-01-09 21:32:07,878 | INFO     | mean x: 1767979287.6849594
[2026-01-09 16:33:14] 2026-01-09 21:32:07,879 | INFO     | mean y: 2533427.2174796746
[2026-01-09 16:33:14] 2026-01-09 21:32:07,879 | INFO     | intersect: -2642408956.8667727
[2026-01-09 16:33:14] 2026-01-09 21:32:07,880 | INFO     | chi2: 0.10611796261309207
[2026-01-09 16:33:14] 2026-01-09 21:32:07,880 | INFO     | current chi2=0.10611796261309207 (change=23.021437195436963 %)
[2026-01-09 16:33:14] 2026-01-09 21:32:07,880 | INFO     | left removable region: 30
[2026-01-09 16:33:14] 2026-01-09 21:32:07,880 | INFO     | sum of square deviations: 32399099058.182705
[2026-01-09 16:33:14] 2026-01-09 21:32:07,884 | INFO     | sum of deviations: 66312282025.77072
[2026-01-09 16:33:14] 2026-01-09 21:32:07,885 | INFO     | mean x: 1767979562.1889596
[2026-01-09 16:33:14] 2026-01-09 21:32:07,885 | INFO     | mean y: 2531521.878980892
[2026-01-09 16:33:14] 2026-01-09 21:32:07,885 | INFO     | intersect: -3616049326.098739
[2026-01-09 16:33:14] 2026-01-09 21:32:07,885 | INFO     | chi2: 0.009228144950536664
[2026-01-09 16:33:14] 2026-01-09 21:32:07,885 | INFO     | current memory leak: 2.05 B/s (using 471 data points, chi2=0.01)
[2026-01-09 16:33:14] 2026-01-09 21:32:07,885 | INFO     | could have reported an average CPU frequency of 3270 MHz (20 samples)
[2026-01-09 16:33:14] 2026-01-09 21:32:07,886 | INFO     | ..............................
[2026-01-09 16:33:14] 2026-01-09 21:32:07,886 | INFO     | . Timing measurements:
[2026-01-09 16:33:14] 2026-01-09 21:32:07,886 | INFO     | . get job = 0 s
[2026-01-09 16:33:14] 2026-01-09 21:32:07,886 | INFO     | . initial setup = 5 s
[2026-01-09 16:33:14] 2026-01-09 21:32:07,886 | INFO     | . payload setup = 25 s
[2026-01-09 16:33:14] 2026-01-09 21:32:07,886 | INFO     | . stage-in = 0 s
[2026-01-09 16:33:14] 2026-01-09 21:32:07,886 | INFO     | . payload execution = 30933 s
[2026-01-09 16:33:14] 2026-01-09 21:32:07,886 | INFO     | . stage-out = 2 s
[2026-01-09 16:33:14] 2026-01-09 21:32:07,886 | INFO     | . log creation = 0 s
[2026-01-09 16:33:14] 2026-01-09 21:32:07,886 | INFO     | ..............................
[2026-01-09 16:33:14] 2026-01-09 21:32:07,968 | INFO     | 
[2026-01-09 16:33:14] 2026-01-09 21:32:07,968 | INFO     | job summary report
[2026-01-09 16:33:14] 2026-01-09 21:32:07,968 | INFO     | --------------------------------------------------
[2026-01-09 16:33:14] 2026-01-09 21:32:07,968 | INFO     | PanDA job id: 6963194310
[2026-01-09 16:33:14] 2026-01-09 21:32:07,968 | INFO     | task id: 47898826
[2026-01-09 16:33:14] 2026-01-09 21:32:07,968 | INFO     | errors: (none)
[2026-01-09 16:33:14] 2026-01-09 21:32:07,968 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 16:33:14] 2026-01-09 21:32:07,968 | INFO     | pilot state: finished 
[2026-01-09 16:33:14] 2026-01-09 21:32:07,969 | INFO     | transexitcode: 0
[2026-01-09 16:33:14] 2026-01-09 21:32:07,969 | INFO     | exeerrorcode: 0
[2026-01-09 16:33:14] 2026-01-09 21:32:07,969 | INFO     | exeerrordiag: 
[2026-01-09 16:33:14] 2026-01-09 21:32:07,969 | INFO     | exitcode: 0
[2026-01-09 16:33:14] 2026-01-09 21:32:07,969 | INFO     | exitmsg: OK
[2026-01-09 16:33:14] 2026-01-09 21:32:07,969 | INFO     | cpuconsumptiontime: 44821 s
[2026-01-09 16:33:14] 2026-01-09 21:32:07,969 | INFO     | nevents: 400
[2026-01-09 16:33:14] 2026-01-09 21:32:07,969 | INFO     | neventsw: 0
[2026-01-09 16:33:14] 2026-01-09 21:32:07,969 | INFO     | pid: 3423056
[2026-01-09 16:33:14] 2026-01-09 21:32:07,969 | INFO     | pgrp: 3423056
[2026-01-09 16:33:14] 2026-01-09 21:32:07,969 | INFO     | corecount: 8
[2026-01-09 16:33:14] 2026-01-09 21:32:07,969 | INFO     | event service: False
[2026-01-09 16:33:14] 2026-01-09 21:32:07,969 | INFO     | sizes: {0: 2283744, 1: 2283999, 2: 2283999, 13: 2284027, 23: 2284345, 24: 2284373, 30962: 2322603, 30965: 2331601, 30967: 2331685, 30975: 2331879}
[2026-01-09 16:33:14] 2026-01-09 21:32:07,969 | INFO     | --------------------------------------------------
[2026-01-09 16:33:14] 2026-01-09 21:32:07,969 | INFO     | 
[2026-01-09 16:33:14] 2026-01-09 21:32:07,969 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-09 16:33:14] 2026-01-09 21:32:07,991 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 16:33:14] 2026-01-09 21:32:07,991 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 16:33:14] 2026-01-09 21:32:07,991 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 16:33:14] 2026-01-09 21:32:07,991 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 16:33:14] 2026-01-09 21:32:07,991 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 16:33:14] 2026-01-09 21:32:07,991 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 16:33:14] 2026-01-09 21:32:07,991 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 16:33:14] 2026-01-09 21:32:07,991 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 16:33:14] 2026-01-09 21:32:07,993 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 16:33:14] 2026-01-09 21:32:07,993 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 16:33:14] 2026-01-09 21:32:07,993 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 16:33:14] 2026-01-09 21:32:07,994 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 16:33:14] 2026-01-09 21:32:07,994 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 16:33:14] 2026-01-09 21:32:07,994 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 16:33:14] 2026-01-09 21:32:07,994 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 16:33:14] 2026-01-09 21:32:07,994 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 16:33:14] 2026-01-09 21:32:07,994 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 16:33:14] 2026-01-09 21:32:07,994 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 16:33:14] 2026-01-09 21:32:07,994 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 16:33:14] 2026-01-09 21:32:07,994 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 16:33:14] 2026-01-09 21:32:07,994 | INFO     | job 6963194310 has completed (purged errors)
[2026-01-09 16:33:14] 2026-01-09 21:32:07,994 | INFO     | overall cleanup function is called
[2026-01-09 16:33:14] 2026-01-09 21:32:08,222 | INFO     | PID=3413332 has CPU usage=11.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-09 16:33:14] 2026-01-09 21:32:08,222 | INFO     | .. there are 24 such processes running
[2026-01-09 16:33:14] 2026-01-09 21:32:09,003 | INFO     | --- collectZombieJob: --- 10, [3423056]
[2026-01-09 16:33:14] 2026-01-09 21:32:09,003 | INFO     | zombie collector waiting for pid 3423056
[2026-01-09 16:33:14] 2026-01-09 21:32:09,004 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 16:33:14] 2026-01-09 21:32:09,004 | INFO     | collected zombie processes
[2026-01-09 16:33:14] 2026-01-09 21:32:09,004 | INFO     | will attempt to kill all subprocesses of pid=3423056
[2026-01-09 16:33:14] 2026-01-09 21:32:09,604 | INFO     | process IDs to be killed: [3423056] (in reverse order)
[2026-01-09 16:33:14] 2026-01-09 21:32:09,760 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 16:33:14] 2026-01-09 21:32:09,760 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 16:33:14] 2026-01-09 21:32:09,778 | INFO     | did not find any defunct processes belonging to 3423056
[2026-01-09 16:33:14] 2026-01-09 21:32:09,791 | INFO     | did not find any defunct processes belonging to 3423056
[2026-01-09 16:33:14] 2026-01-09 21:32:09,791 | INFO     | ready for new job
[2026-01-09 16:33:14] 2026-01-09 21:32:09,792 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 16:33:14] 2026-01-09 21:32:09,794 | INFO     | ***************************************
[2026-01-09 16:33:14] 2026-01-09 21:32:09,794 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 16:33:14] 2026-01-09 21:32:09,794 | INFO     | ***************************************
[2026-01-09 16:33:14] 2026-01-09 21:32:09,794 | INFO     | 
[2026-01-09 16:33:14] 2026-01-09 21:32:09,798 | INFO     | architecture information:
[2026-01-09 16:33:14] 2026-01-09 21:32:09,798 | INFO     | executing command: cat /etc/os-release
[2026-01-09 16:33:14] 2026-01-09 21:32:09,810 | INFO     | cat /etc/os-release:
[2026-01-09 16:33:14] NAME="CentOS Linux"
[2026-01-09 16:33:14] VERSION="7 (Core)"
[2026-01-09 16:33:14] ID="centos"
[2026-01-09 16:33:14] ID_LIKE="rhel fedora"
[2026-01-09 16:33:14] VERSION_ID="7"
[2026-01-09 16:33:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 16:33:14] ANSI_COLOR="0;31"
[2026-01-09 16:33:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 16:33:14] HOME_URL="https://www.centos.org/"
[2026-01-09 16:33:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 16:33:14] 
[2026-01-09 16:33:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 16:33:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 16:33:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 16:33:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 16:33:14] 
[2026-01-09 16:33:14] 2026-01-09 21:32:09,811 | INFO     | ***************************************
[2026-01-09 16:33:14] 2026-01-09 21:32:10,314 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-09 16:33:14] 2026-01-09 21:32:10,357 | INFO     | sufficient remaining disk space (73847013376 B)
[2026-01-09 16:33:14] 2026-01-09 21:32:10,357 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 16:33:14] 2026-01-09 21:32:10,357 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 16:33:14] 2026-01-09 21:32:10,357 | INFO     | update_server=False
[2026-01-09 16:33:14] 2026-01-09 21:32:10,357 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 16:33:14] 2026-01-09 21:32:10,357 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 16:33:14] 2026-01-09 21:32:10,358 | INFO     | aborting loop
[2026-01-09 16:33:14] 2026-01-09 21:32:10,358 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 16:33:14] 2026-01-09 21:32:10,840 | INFO     | all payload control threads have been joined
[2026-01-09 16:33:14] 2026-01-09 21:32:10,888 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 16:33:14] 2026-01-09 21:32:11,348 | INFO     | all data control threads have been joined
[2026-01-09 16:33:14] 2026-01-09 21:32:11,349 | INFO     | all job control threads have been joined
[2026-01-09 16:33:14] 2026-01-09 21:32:11,362 | INFO     | [job] job monitor thread has finished
[2026-01-09 16:33:14] 2026-01-09 21:32:11,363 | INFO     | [job] retrieve thread has finished
[2026-01-09 16:33:14] 2026-01-09 21:32:11,846 | INFO     | [payload] control thread has finished
[2026-01-09 16:33:14] 2026-01-09 21:32:12,104 | INFO     | [payload] validate_post thread has finished
[2026-01-09 16:33:14] 2026-01-09 21:32:12,203 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 16:33:14] 2026-01-09 21:32:12,204 | INFO     | [data] copytool_in thread has finished
[2026-01-09 16:33:14] 2026-01-09 21:32:12,209 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 16:33:14] 2026-01-09 21:32:12,209 | INFO     | [job] validate thread has finished
[2026-01-09 16:33:14] 2026-01-09 21:32:12,284 | INFO     | [payload] failed_post thread has finished
[2026-01-09 16:33:14] 2026-01-09 21:32:12,354 | INFO     | [data] control thread has finished
[2026-01-09 16:33:14] 2026-01-09 21:32:12,355 | INFO     | [job] control thread has finished
[2026-01-09 16:33:14] 2026-01-09 21:32:12,466 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 16:33:14] 2026-01-09 21:32:12,894 | INFO     | [data] copytool_out thread has finished
[2026-01-09 16:33:14] 2026-01-09 21:32:12,971 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 16:33:14] 2026-01-09 21:32:13,976 | INFO     | [job] queue monitor thread has finished
[2026-01-09 16:33:14] 2026-01-09 21:32:14,366 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 16:33:14] 2026-01-09 21:32:20,417 | INFO     | job.realtimelogging is not enabled
[2026-01-09 16:33:14] 2026-01-09 21:32:21,423 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 16:33:14] 2026-01-09 21:32:43,819 | INFO     | PID=3413332 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 16:33:14] 2026-01-09 21:32:43,819 | INFO     | .. there are 24 such processes running
[2026-01-09 16:33:14] 2026-01-09 21:32:43,819 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 16:33:14] 2026-01-09 21:32:43,819 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 16:33:14] 2026-01-09 21:32:43,819 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 16:33:14] 2026-01-09 21:33:06,351 | INFO     | [monitor] cgroup control has ended
[2026-01-09 16:33:14] 2026-01-09 21:33:07,371 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140033019774784)>', '<ExcThread(monitor, started 140032660707072)>']
[2026-01-09 16:33:14] 2026-01-09 21:33:07,962 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 16:33:14] 2026-01-09 21:33:07,962 | INFO     | [monitor] control thread has ended
[2026-01-09 16:33:14] 2026-01-09 21:33:12,396 | INFO     | all workflow threads have been joined
[2026-01-09 16:33:14] 2026-01-09 21:33:12,396 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 16:33:14] 2026-01-09 21:33:12,397 | INFO     | traces error code: 0
[2026-01-09 16:33:14] 2026-01-09 21:33:12,397 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 16:33:14] 2026-01-09 21:33:13,322 [wrapper] ==== pilot stdout END ====
[2026-01-09 16:33:14] 2026-01-09 21:33:13,349 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 16:33:14] 2026-01-09 21:33:13,388 [wrapper] pilotpid: 3413332
[2026-01-09 16:33:14] 2026-01-09 21:33:13,423 [wrapper] Pilot exit status: 0
[2026-01-09 16:33:14] 2026-01-09 21:33:13,534 [wrapper] pandaids: 6963194310
[2026-01-09 16:33:14] 2026-01-09 21:33:13,970 [wrapper] cleanup supervisor_pilot 2141844 3413333
[2026-01-09 16:33:14] 2026-01-09 21:33:13,982 [wrapper] Test setup, not cleaning
[2026-01-09 16:33:14] 2026-01-09 21:33:13,999 [wrapper] apfmon messages muted
[2026-01-09 16:33:14] 2026-01-09 21:33:14,014 [wrapper] ==== wrapper stdout END ====
[2026-01-09 16:33:14] 2026-01-09 21:33:14,027 [wrapper] ==== wrapper stderr END ====
[2026-01-09 16:33:14]  *** Error codes and diagnostics ***
[2026-01-09 16:33:14]     "exeErrorCode": 0,
[2026-01-09 16:33:14]     "exeErrorDiag": "",
[2026-01-09 16:33:14]     "pilotErrorCode": 0,
[2026-01-09 16:33:14]     "pilotErrorDiag": "",
[2026-01-09 16:33:14]  *** Listing of results directory ***
[2026-01-09 16:33:14] total 448952
[2026-01-09 16:33:14] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-09 16:33:14] -rwx------. 1 boincer umatlas     36322 Jan  8 23:26 runpilot2-wrapper.sh
[2026-01-09 16:33:14] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 23:30 queuedata.json
[2026-01-09 16:33:14] -rw-r--r--. 1 boincer umatlas       100 Jan  9 07:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 16:33:14] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 07:53 run_atlas
[2026-01-09 16:33:14] -rw-r--r--. 1 boincer umatlas       105 Jan  9 07:53 job.xml
[2026-01-09 16:33:14] -rw-r--r--. 2 boincer umatlas 223266981 Jan  9 07:53 EVNT.47898824._001513.pool.root.1
[2026-01-09 16:33:14] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 07:53 start_atlas.sh
[2026-01-09 16:33:14] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 07:53 shared
[2026-01-09 16:33:14] -rw-r--r--. 2 boincer umatlas    592401 Jan  9 07:53 input.tar.gz
[2026-01-09 16:33:14] -rw-r--r--. 1 boincer umatlas         0 Jan  9 07:53 boinc_lockfile
[2026-01-09 16:33:14] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 07:54 pandaJob.out
[2026-01-09 16:33:14] -rw-------. 1 boincer umatlas        57 Jan  9 07:54 setup.sh.local
[2026-01-09 16:33:14] -rw-------. 1 boincer umatlas    989377 Jan  9 07:55 agis_schedconf.cvmfs.json
[2026-01-09 16:33:14] drwx------. 5 boincer umatlas      4096 Jan  9 07:55 pilot3
[2026-01-09 16:33:14] -rw-r--r--. 1 boincer umatlas      6944 Jan  9 16:27 init_data.xml
[2026-01-09 16:33:14] -rw-------. 1 boincer umatlas 223876516 Jan  9 16:31 HITS.47898826._039373.pool.root.1
[2026-01-09 16:33:14] -rw-r--r--. 1 boincer umatlas       530 Jan  9 16:31 boinc_task_state.xml
[2026-01-09 16:33:14] -rw-------. 1 boincer umatlas        95 Jan  9 16:31 pilot_heartbeat.json
[2026-01-09 16:33:14] -rw-------. 1 boincer umatlas      1034 Jan  9 16:31 memory_monitor_summary.json
[2026-01-09 16:33:14] -rw-------. 1 boincer umatlas   1516240 Jan  9 16:31 agis_ddmendpoints.agis.ALL.json
[2026-01-09 16:33:14] -rw-------. 1 boincer umatlas    665715 Jan  9 16:31 log.47898826._039373.job.log.tgz.1
[2026-01-09 16:33:14] -rw-------. 1 boincer umatlas      7775 Jan  9 16:32 heartbeat.json
[2026-01-09 16:33:14] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 16:32 boinc_mmap_file
[2026-01-09 16:33:14] -rw-r--r--. 1 boincer umatlas        28 Jan  9 16:32 wrapper_checkpoint.txt
[2026-01-09 16:33:14] -rw-------. 1 boincer umatlas      4896 Jan  9 16:33 pilotlog.txt
[2026-01-09 16:33:14] -rw-------. 1 boincer umatlas   3665192 Jan  9 16:33 log.47898826._039373.job.log.1
[2026-01-09 16:33:14] -rw-------. 1 boincer umatlas       357 Jan  9 16:33 output.list
[2026-01-09 16:33:14] -rw-r--r--. 1 boincer umatlas       620 Jan  9 16:33 runtime_log
[2026-01-09 16:33:14] -rw-------. 1 boincer umatlas   4352000 Jan  9 16:33 result.tar.gz
[2026-01-09 16:33:14] -rw-r--r--. 1 boincer umatlas      9338 Jan  9 16:33 runtime_log.err
[2026-01-09 16:33:14] -rw-------. 1 boincer umatlas       657 Jan  9 16:33 0tJMDmlFJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmTDhKDmly21Pn.diag
[2026-01-09 16:33:14] -rw-r--r--. 1 boincer umatlas     21296 Jan  9 16:33 stderr.txt
[2026-01-09 16:33:14] HITS file was successfully produced:
[2026-01-09 16:33:14] -rw-------. 1 boincer umatlas 223876516 Jan  9 16:31 shared/HITS.pool.root.1
[2026-01-09 16:33:14]  *** Contents of shared directory: ***
[2026-01-09 16:33:14] total 441524
[2026-01-09 16:33:14] -rw-r--r--. 2 boincer umatlas 223266981 Jan  9 07:53 ATLAS.root_0
[2026-01-09 16:33:14] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 07:53 start_atlas.sh
[2026-01-09 16:33:14] -rw-r--r--. 2 boincer umatlas    592401 Jan  9 07:53 input.tar.gz
[2026-01-09 16:33:14] -rw-------. 1 boincer umatlas 223876516 Jan  9 16:31 HITS.pool.root.1
[2026-01-09 16:33:14] -rw-------. 1 boincer umatlas   4352000 Jan  9 16:33 result.tar.gz
16:33:15 (3408073): run_atlas exited; CPU time 46014.150025
16:33:15 (3408073): called boinc_finish(0)

</stderr_txt>
]]>

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