Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:00:38 (3569213): wrapper (7.7.26015): starting
02:00:38 (3569213): wrapper: running run_atlas (--nthreads 4)
[2026-01-11 02:00:38] Arguments: --nthreads 4
[2026-01-11 02:00:38] Threads: 4
[2026-01-11 02:00:38] Checking for CVMFS
[2026-01-11 02:00:38] No cvmfs_config command found, will try listing directly
[2026-01-11 02:00:38] CVMFS is ok
[2026-01-11 02:00:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 02:00:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 02:00:38] Further information can be found at the LHC@home message board.
[2026-01-11 02:00:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 02:00:38] Checking for apptainer binary...
[2026-01-11 02:00:38] which: no apptainer in ((null))
[2026-01-11 02:00:38] apptainer is not installed, using version from CVMFS
[2026-01-11 02:00:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 02:00:39] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot128/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2026-01-11 02:00:39] apptainer works
[2026-01-11 02:00:39] Set ATHENA_PROC_NUMBER=4
[2026-01-11 02:00:39] Set ATHENA_CORE_NUMBER=4
[2026-01-11 02:00:39] Starting ATLAS job with PandaID=6963193835
[2026-01-11 02:00:39] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot128/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 05:40:21]  *** The last 200 lines of the pilot log: ***
[2026-01-11 05:40:21] 2026-01-11 04:39:27,875 | INFO     | monitor loop #896: job 0:6963193835 is in state 'finished'
[2026-01-11 05:40:21] 2026-01-11 04:39:27,876 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 05:40:21] 2026-01-11 04:39:27,885 | INFO     | using path: /scratch/boinc/var/slot128/slots/0/PanDA_Pilot-6963193835/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 05:40:21] 2026-01-11 04:39:27,885 | INFO     | extracted standard info from prmon json
[2026-01-11 05:40:21] 2026-01-11 04:39:27,886 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 05:40:21] 2026-01-11 04:39:27,886 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 05:40:21] 2026-01-11 04:39:27,886 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 05:40:21] 2026-01-11 04:39:27,886 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 05:40:21] 2026-01-11 04:39:27,890 | INFO     | fitting pss+swap vs Time
[2026-01-11 05:40:21] 2026-01-11 04:39:27,890 | INFO     | sum of square deviations: 3081657780.0
[2026-01-11 05:40:21] 2026-01-11 04:39:27,892 | INFO     | sum of deviations: 5571958196.999994
[2026-01-11 05:40:21] 2026-01-11 04:39:27,892 | INFO     | mean x: 1768099815.0
[2026-01-11 05:40:21] 2026-01-11 04:39:27,892 | INFO     | mean y: 2315961.930232558
[2026-01-11 05:40:21] 2026-01-11 04:39:27,892 | INFO     | intersect: -3194592637.474151
[2026-01-11 05:40:21] 2026-01-11 04:39:27,892 | INFO     | chi2: 1.9402013644787197
[2026-01-11 05:40:21] 2026-01-11 04:39:27,893 | INFO     | sum of square deviations: 2871616632.5
[2026-01-11 05:40:21] 2026-01-11 04:39:27,894 | INFO     | sum of deviations: 17567418273.499996
[2026-01-11 05:40:21] 2026-01-11 04:39:27,894 | INFO     | mean x: 1768099662.5
[2026-01-11 05:40:21] 2026-01-11 04:39:27,894 | INFO     | mean y: 2324502.995238095
[2026-01-11 05:40:21] 2026-01-11 04:39:27,894 | INFO     | intersect: -10814212066.975224
[2026-01-11 05:40:21] 2026-01-11 04:39:27,894 | INFO     | chi2: 1.2784853790075692
[2026-01-11 05:40:21] 2026-01-11 04:39:27,895 | INFO     | current chi2=1.2784853790075692 (change=34.10553139410537 %)
[2026-01-11 05:40:21] 2026-01-11 04:39:27,895 | INFO     | sum of square deviations: 2671343110.0
[2026-01-11 05:40:21] 2026-01-11 04:39:27,896 | INFO     | sum of deviations: 17056785230.0
[2026-01-11 05:40:21] 2026-01-11 04:39:27,896 | INFO     | mean x: 1768099510.0
[2026-01-11 05:40:21] 2026-01-11 04:39:27,896 | INFO     | mean y: 2324114.1024390245
[2026-01-11 05:40:21] 2026-01-11 04:39:27,896 | INFO     | intersect: -11287162996.124384
[2026-01-11 05:40:21] 2026-01-11 04:39:27,897 | INFO     | chi2: 1.2791857653251906
[2026-01-11 05:40:21] 2026-01-11 04:39:27,897 | INFO     | current chi2=1.2791857653251906 (change=-0.054782505073702865 %)
[2026-01-11 05:40:21] 2026-01-11 04:39:27,897 | INFO     | right removable region: 204
[2026-01-11 05:40:21] 2026-01-11 04:39:27,897 | INFO     | sum of square deviations: 2871616632.5
[2026-01-11 05:40:21] 2026-01-11 04:39:27,899 | INFO     | sum of deviations: -17790370162.5
[2026-01-11 05:40:21] 2026-01-11 04:39:27,899 | INFO     | mean x: 1768099967.5
[2026-01-11 05:40:21] 2026-01-11 04:39:27,899 | INFO     | mean y: 2332674.976190476
[2026-01-11 05:40:21] 2026-01-11 04:39:27,899 | INFO     | intersect: 10956146129.784288
[2026-01-11 05:40:21] 2026-01-11 04:39:27,899 | INFO     | chi2: 0.7227044142163513
[2026-01-11 05:40:21] 2026-01-11 04:39:27,899 | INFO     | current chi2=0.7227044142163513 (change=62.75106143889747 %)
[2026-01-11 05:40:21] 2026-01-11 04:39:27,900 | INFO     | sum of square deviations: 2671343110.0
[2026-01-11 05:40:21] 2026-01-11 04:39:27,901 | INFO     | sum of deviations: -13797965150.000002
[2026-01-11 05:40:21] 2026-01-11 04:39:27,901 | INFO     | mean x: 1768100120.0
[2026-01-11 05:40:21] 2026-01-11 04:39:27,901 | INFO     | mean y: 2329619.843902439
[2026-01-11 05:40:21] 2026-01-11 04:39:27,901 | INFO     | intersect: 9134883108.066843
[2026-01-11 05:40:21] 2026-01-11 04:39:27,902 | INFO     | chi2: 0.7102672579855991
[2026-01-11 05:40:21] 2026-01-11 04:39:27,902 | INFO     | current chi2=0.7102672579855991 (change=1.720918813570305 %)
[2026-01-11 05:40:21] 2026-01-11 04:39:27,902 | INFO     | left removable region: 20
[2026-01-11 05:40:21] 2026-01-11 04:39:27,902 | INFO     | sum of square deviations: 1931608310.0
[2026-01-11 05:40:21] 2026-01-11 04:39:27,903 | INFO     | sum of deviations: 3277076953.0000005
[2026-01-11 05:40:21] 2026-01-11 04:39:27,903 | INFO     | mean x: 1768100089.5
[2026-01-11 05:40:21] 2026-01-11 04:39:27,904 | INFO     | mean y: 2334185.163043478
[2026-01-11 05:40:21] 2026-01-11 04:39:27,904 | INFO     | intersect: -2997342314.415532
[2026-01-11 05:40:21] 2026-01-11 04:39:27,904 | INFO     | chi2: 0.0008294557676342286
[2026-01-11 05:40:21] 2026-01-11 04:39:27,904 | INFO     | current memory leak: 1.70 B/s (using 184 data points, chi2=0.00)
[2026-01-11 05:40:21] 2026-01-11 04:39:27,905 | INFO     | could have reported an average CPU frequency of 2697 MHz (11 samples)
[2026-01-11 05:40:21] 2026-01-11 04:39:27,905 | INFO     | ..............................
[2026-01-11 05:40:21] 2026-01-11 04:39:27,905 | INFO     | . Timing measurements:
[2026-01-11 05:40:21] 2026-01-11 04:39:27,905 | INFO     | . get job = 0 s
[2026-01-11 05:40:21] 2026-01-11 04:39:27,905 | INFO     | . initial setup = 1 s
[2026-01-11 05:40:21] 2026-01-11 04:39:27,905 | INFO     | . payload setup = 9 s
[2026-01-11 05:40:21] 2026-01-11 04:39:27,905 | INFO     | . stage-in = 0 s
[2026-01-11 05:40:21] 2026-01-11 04:39:27,905 | INFO     | . payload execution = 13071 s
[2026-01-11 05:40:21] 2026-01-11 04:39:27,906 | INFO     | . stage-out = 1 s
[2026-01-11 05:40:21] 2026-01-11 04:39:27,906 | INFO     | . log creation = 0 s
[2026-01-11 05:40:21] 2026-01-11 04:39:27,906 | INFO     | ..............................
[2026-01-11 05:40:21] 2026-01-11 04:39:27,927 | INFO     | time since job start (13114s) is within the limit (349056.0s)
[2026-01-11 05:40:21] 2026-01-11 04:39:27,999 | INFO     | 
[2026-01-11 05:40:21] 2026-01-11 04:39:28,000 | INFO     | job summary report
[2026-01-11 05:40:21] 2026-01-11 04:39:28,000 | INFO     | --------------------------------------------------
[2026-01-11 05:40:21] 2026-01-11 04:39:28,000 | INFO     | PanDA job id: 6963193835
[2026-01-11 05:40:21] 2026-01-11 04:39:28,000 | INFO     | task id: 47898826
[2026-01-11 05:40:21] 2026-01-11 04:39:28,000 | INFO     | errors: (none)
[2026-01-11 05:40:21] 2026-01-11 04:39:28,000 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 05:40:21] 2026-01-11 04:39:28,000 | INFO     | pilot state: finished 
[2026-01-11 05:40:21] 2026-01-11 04:39:28,000 | INFO     | transexitcode: 0
[2026-01-11 05:40:21] 2026-01-11 04:39:28,000 | INFO     | exeerrorcode: 0
[2026-01-11 05:40:21] 2026-01-11 04:39:28,000 | INFO     | exeerrordiag: 
[2026-01-11 05:40:21] 2026-01-11 04:39:28,000 | INFO     | exitcode: 0
[2026-01-11 05:40:21] 2026-01-11 04:39:28,001 | INFO     | exitmsg: OK
[2026-01-11 05:40:21] 2026-01-11 04:39:28,001 | INFO     | cpuconsumptiontime: 50275 s
[2026-01-11 05:40:21] 2026-01-11 04:39:28,001 | INFO     | nevents: 400
[2026-01-11 05:40:21] 2026-01-11 04:39:28,001 | INFO     | neventsw: 0
[2026-01-11 05:40:21] 2026-01-11 04:39:28,001 | INFO     | pid: 3580763
[2026-01-11 05:40:21] 2026-01-11 04:39:28,001 | INFO     | pgrp: 3580763
[2026-01-11 05:40:21] 2026-01-11 04:39:28,001 | INFO     | corecount: 4
[2026-01-11 05:40:21] 2026-01-11 04:39:28,001 | INFO     | event service: False
[2026-01-11 05:40:21] 2026-01-11 04:39:28,001 | INFO     | sizes: {0: 2283983, 7: 2284245, 11: 2284273, 13085: 2315048, 13086: 2324070, 13088: 2324126, 13097: 2324448}
[2026-01-11 05:40:21] 2026-01-11 04:39:28,001 | INFO     | --------------------------------------------------
[2026-01-11 05:40:21] 2026-01-11 04:39:28,001 | INFO     | 
[2026-01-11 05:40:21] 2026-01-11 04:39:28,002 | INFO     | executing command: ls -lF /scratch/boinc/var/slot128/slots/0
[2026-01-11 05:40:21] 2026-01-11 04:39:28,029 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 05:40:21] 2026-01-11 04:39:28,030 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 05:40:21] 2026-01-11 04:39:28,030 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 05:40:21] 2026-01-11 04:39:28,030 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 05:40:21] 2026-01-11 04:39:28,030 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 05:40:21] 2026-01-11 04:39:28,030 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 05:40:21] 2026-01-11 04:39:28,030 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 05:40:21] 2026-01-11 04:39:28,030 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 05:40:21] 2026-01-11 04:39:28,030 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 05:40:21] 2026-01-11 04:39:28,030 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 05:40:21] 2026-01-11 04:39:28,031 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 05:40:21] 2026-01-11 04:39:28,031 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 05:40:21] 2026-01-11 04:39:28,031 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 05:40:21] 2026-01-11 04:39:28,031 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 05:40:21] 2026-01-11 04:39:28,031 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 05:40:21] 2026-01-11 04:39:28,031 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 05:40:21] 2026-01-11 04:39:28,031 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 05:40:21] 2026-01-11 04:39:28,031 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 05:40:21] 2026-01-11 04:39:28,031 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 05:40:21] 2026-01-11 04:39:28,031 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 05:40:21] 2026-01-11 04:39:28,031 | INFO     | job 6963193835 has completed (purged errors)
[2026-01-11 05:40:21] 2026-01-11 04:39:28,032 | INFO     | overall cleanup function is called
[2026-01-11 05:40:21] 2026-01-11 04:39:29,036 | INFO     | --- collectZombieJob: --- 10, [3580763]
[2026-01-11 05:40:21] 2026-01-11 04:39:29,036 | INFO     | zombie collector waiting for pid 3580763
[2026-01-11 05:40:21] 2026-01-11 04:39:29,037 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 05:40:21] 2026-01-11 04:39:29,037 | INFO     | collected zombie processes
[2026-01-11 05:40:21] 2026-01-11 04:39:29,037 | INFO     | will attempt to kill all subprocesses of pid=3580763
[2026-01-11 05:40:21] 2026-01-11 04:39:29,770 | INFO     | process IDs to be killed: [3580763] (in reverse order)
[2026-01-11 05:40:21] 2026-01-11 04:39:30,001 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 05:40:21] 2026-01-11 04:39:30,002 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 05:40:21] 2026-01-11 04:39:30,030 | INFO     | did not find any defunct processes belonging to 3580763
[2026-01-11 05:40:21] 2026-01-11 04:39:30,057 | INFO     | did not find any defunct processes belonging to 3580763
[2026-01-11 05:40:21] 2026-01-11 04:39:30,057 | INFO     | ready for new job
[2026-01-11 05:40:21] 2026-01-11 04:39:30,057 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 05:40:21] 2026-01-11 04:39:30,060 | INFO     | ***************************************
[2026-01-11 05:40:21] 2026-01-11 04:39:30,060 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 05:40:21] 2026-01-11 04:39:30,060 | INFO     | ***************************************
[2026-01-11 05:40:21] 2026-01-11 04:39:30,060 | INFO     | 
[2026-01-11 05:40:21] 2026-01-11 04:39:30,068 | INFO     | architecture information:
[2026-01-11 05:40:21] 2026-01-11 04:39:30,068 | INFO     | executing command: cat /etc/os-release
[2026-01-11 05:40:21] 2026-01-11 04:39:30,095 | INFO     | cat /etc/os-release:
[2026-01-11 05:40:21] NAME="CentOS Linux"
[2026-01-11 05:40:21] VERSION="7 (Core)"
[2026-01-11 05:40:21] ID="centos"
[2026-01-11 05:40:21] ID_LIKE="rhel fedora"
[2026-01-11 05:40:21] VERSION_ID="7"
[2026-01-11 05:40:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 05:40:21] ANSI_COLOR="0;31"
[2026-01-11 05:40:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 05:40:21] HOME_URL="https://www.centos.org/"
[2026-01-11 05:40:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 05:40:21] 
[2026-01-11 05:40:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 05:40:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 05:40:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 05:40:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 05:40:21] 
[2026-01-11 05:40:21] 2026-01-11 04:39:30,095 | INFO     | ***************************************
[2026-01-11 05:40:21] 2026-01-11 04:39:30,599 | INFO     | executing command: df -mP /scratch/boinc/var/slot128/slots/0
[2026-01-11 05:40:21] 2026-01-11 04:39:30,623 | INFO     | sufficient remaining disk space (3345516331008 B)
[2026-01-11 05:40:21] 2026-01-11 04:39:30,627 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 05:40:21] 2026-01-11 04:39:30,627 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 05:40:21] 2026-01-11 04:39:30,627 | INFO     | update_server=False
[2026-01-11 05:40:21] 2026-01-11 04:39:30,627 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 05:40:21] 2026-01-11 04:39:31,384 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 05:40:21] 2026-01-11 04:39:31,384 | INFO     | aborting loop
[2026-01-11 05:40:21] 2026-01-11 04:39:31,486 | INFO     | all job control threads have been joined
[2026-01-11 05:40:21] 2026-01-11 04:39:31,619 | INFO     | all data control threads have been joined
[2026-01-11 05:40:21] 2026-01-11 04:39:31,633 | INFO     | [job] retrieve thread has finished
[2026-01-11 05:40:21] 2026-01-11 04:39:31,701 | INFO     | [job] validate thread has finished
[2026-01-11 05:40:21] 2026-01-11 04:39:31,725 | INFO     | [data] copytool_in thread has finished
[2026-01-11 05:40:21] 2026-01-11 04:39:31,820 | INFO     | all payload control threads have been joined
[2026-01-11 05:40:21] 2026-01-11 04:39:32,056 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 05:40:21] 2026-01-11 04:39:32,111 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 05:40:21] 2026-01-11 04:39:32,389 | INFO     | [job] job monitor thread has finished
[2026-01-11 05:40:21] 2026-01-11 04:39:32,432 | INFO     | [payload] validate_post thread has finished
[2026-01-11 05:40:21] 2026-01-11 04:39:32,488 | INFO     | [job] control thread has finished
[2026-01-11 05:40:21] 2026-01-11 04:39:32,499 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 05:40:21] 2026-01-11 04:39:32,625 | INFO     | [data] control thread has finished
[2026-01-11 05:40:21] 2026-01-11 04:39:32,826 | INFO     | [payload] control thread has finished
[2026-01-11 05:40:21] 2026-01-11 04:39:32,827 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 05:40:21] 2026-01-11 04:39:32,835 | INFO     | [payload] failed_post thread has finished
[2026-01-11 05:40:21] 2026-01-11 04:39:33,009 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 05:40:21] 2026-01-11 04:39:33,611 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 05:40:21] 2026-01-11 04:39:34,010 | INFO     | [job] queue monitor thread has finished
[2026-01-11 05:40:21] 2026-01-11 04:39:34,061 | INFO     | [data] copytool_out thread has finished
[2026-01-11 05:40:21] 2026-01-11 04:39:37,618 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 05:40:21] 2026-01-11 04:39:41,120 | INFO     | job.realtimelogging is not enabled
[2026-01-11 05:40:21] 2026-01-11 04:39:42,125 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 05:40:21] 2026-01-11 04:40:01,911 | INFO     | PID=3573292 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 05:40:21] 2026-01-11 04:40:01,911 | INFO     | .. there are 5 such processes running
[2026-01-11 05:40:21] 2026-01-11 04:40:01,911 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 05:40:21] 2026-01-11 04:40:01,911 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 05:40:21] 2026-01-11 04:40:01,912 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 05:40:21] 2026-01-11 04:40:13,931 | INFO     | [monitor] cgroup control has ended
[2026-01-11 05:40:21] 2026-01-11 04:40:15,900 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22414306711360)>', '<ExcThread(monitor, started 22414066939648)>']
[2026-01-11 05:40:21] 2026-01-11 04:40:15,975 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 05:40:21] 2026-01-11 04:40:15,976 | INFO     | [monitor] control thread has ended
[2026-01-11 05:40:21] 2026-01-11 04:40:20,925 | INFO     | all workflow threads have been joined
[2026-01-11 05:40:21] 2026-01-11 04:40:20,926 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 05:40:21] 2026-01-11 04:40:20,926 | INFO     | traces error code: 0
[2026-01-11 05:40:21] 2026-01-11 04:40:20,926 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 05:40:21] 2026-01-11 04:40:21,116 [wrapper] ==== pilot stdout END ====
[2026-01-11 05:40:21] 2026-01-11 04:40:21,120 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 05:40:21] 2026-01-11 04:40:21,124 [wrapper] pilotpid: 3573292
[2026-01-11 05:40:21] 2026-01-11 04:40:21,128 [wrapper] Pilot exit status: 0
[2026-01-11 05:40:21] 2026-01-11 04:40:21,142 [wrapper] pandaids: 6963193835
[2026-01-11 05:40:21] 2026-01-11 04:40:21,297 [wrapper] cleanup supervisor_pilot 3889906 3573293
[2026-01-11 05:40:21] 2026-01-11 04:40:21,301 [wrapper] Test setup, not cleaning
[2026-01-11 05:40:21] 2026-01-11 04:40:21,305 [wrapper] apfmon messages muted
[2026-01-11 05:40:21] 2026-01-11 04:40:21,308 [wrapper] ==== wrapper stdout END ====
[2026-01-11 05:40:21] 2026-01-11 04:40:21,312 [wrapper] ==== wrapper stderr END ====
[2026-01-11 05:40:21]  *** Error codes and diagnostics ***
[2026-01-11 05:40:21]     "exeErrorCode": 0,
[2026-01-11 05:40:21]     "exeErrorDiag": "",
[2026-01-11 05:40:21]     "pilotErrorCode": 0,
[2026-01-11 05:40:21]     "pilotErrorDiag": "",
[2026-01-11 05:40:21]  *** Listing of results directory ***
[2026-01-11 05:40:21] total 442112
[2026-01-11 05:40:21] -rw-r--r-- 1 boinc boinc    579449 Jan  9 05:21 pilot3.tar.gz
[2026-01-11 05:40:21] -rwx------ 1 boinc boinc     36322 Jan  9 05:26 runpilot2-wrapper.sh
[2026-01-11 05:40:21] -rw-r--r-- 1 boinc boinc      5112 Jan  9 05:30 queuedata.json
[2026-01-11 05:40:21] -rw-r--r-- 1 boinc boinc       100 Jan 11 02:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 05:40:21] -rwxr-xr-x 1 boinc boinc      7986 Jan 11 02:00 run_atlas
[2026-01-11 05:40:21] -rw-r--r-- 1 boinc boinc       105 Jan 11 02:00 job.xml
[2026-01-11 05:40:21] -rw-r--r-- 2 boinc boinc 223988559 Jan 11 02:00 EVNT.47898824._001511.pool.root.1
[2026-01-11 05:40:21] -rw-r--r-- 1 boinc boinc      6691 Jan 11 02:00 init_data.xml
[2026-01-11 05:40:21] -rw-r--r-- 2 boinc boinc     15847 Jan 11 02:00 start_atlas.sh
[2026-01-11 05:40:21] drwxrwx--x 2 boinc boinc      4096 Jan 11 02:00 shared
[2026-01-11 05:40:21] -rw-r--r-- 2 boinc boinc    592401 Jan 11 02:00 input.tar.gz
[2026-01-11 05:40:21] -rw-r--r-- 1 boinc boinc         0 Jan 11 02:00 boinc_lockfile
[2026-01-11 05:40:21] -rw-r--r-- 1 boinc boinc      2520 Jan 11 02:00 pandaJob.out
[2026-01-11 05:40:21] -rw------- 1 boinc boinc    989540 Jan 11 02:00 agis_schedconf.cvmfs.json
[2026-01-11 05:40:21] drwx------ 5 boinc boinc      4096 Jan 11 02:00 pilot3
[2026-01-11 05:40:21] -rw------- 1 boinc boinc 220391013 Jan 11 05:38 HITS.47898826._039308.pool.root.1
[2026-01-11 05:40:21] -rw-r--r-- 1 boinc boinc       528 Jan 11 05:38 boinc_task_state.xml
[2026-01-11 05:40:21] -rw------- 1 boinc boinc        95 Jan 11 05:39 pilot_heartbeat.json
[2026-01-11 05:40:21] -rw------- 1 boinc boinc      1031 Jan 11 05:39 memory_monitor_summary.json
[2026-01-11 05:40:21] -rw------- 1 boinc boinc   1516240 Jan 11 05:39 agis_ddmendpoints.agis.ALL.json
[2026-01-11 05:40:21] -rw------- 1 boinc boinc    384969 Jan 11 05:39 log.47898826._039308.job.log.tgz.1
[2026-01-11 05:40:21] -rw------- 1 boinc boinc      7785 Jan 11 05:39 heartbeat.json
[2026-01-11 05:40:21] -rw-r--r-- 1 boinc boinc      8192 Jan 11 05:40 boinc_mmap_file
[2026-01-11 05:40:21] -rw-r--r-- 1 boinc boinc        26 Jan 11 05:40 wrapper_checkpoint.txt
[2026-01-11 05:40:21] -rw------- 1 boinc boinc      4907 Jan 11 05:40 pilotlog.txt
[2026-01-11 05:40:21] -rw------- 1 boinc boinc   1832170 Jan 11 05:40 log.47898826._039308.job.log.1
[2026-01-11 05:40:21] -rw------- 1 boinc boinc       357 Jan 11 05:40 output.list
[2026-01-11 05:40:21] -rw-r--r-- 1 boinc boinc       620 Jan 11 05:40 runtime_log
[2026-01-11 05:40:21] -rw------- 1 boinc boinc   2232320 Jan 11 05:40 result.tar.gz
[2026-01-11 05:40:21] -rw-r--r-- 1 boinc boinc      9223 Jan 11 05:40 runtime_log.err
[2026-01-11 05:40:21] -rw------- 1 boinc boinc       666 Jan 11 05:40 2t8KDmlFJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmiChKDmySrD1m.diag
[2026-01-11 05:40:21] -rw-r--r-- 1 boinc boinc     20887 Jan 11 05:40 stderr.txt
[2026-01-11 05:40:21] HITS file was successfully produced:
[2026-01-11 05:40:21] -rw------- 1 boinc boinc 220391013 Jan 11 05:38 shared/HITS.pool.root.1
[2026-01-11 05:40:21]  *** Contents of shared directory: ***
[2026-01-11 05:40:21] total 436752
[2026-01-11 05:40:21] -rw-r--r-- 2 boinc boinc 223988559 Jan 11 02:00 ATLAS.root_0
[2026-01-11 05:40:21] -rw-r--r-- 2 boinc boinc     15847 Jan 11 02:00 start_atlas.sh
[2026-01-11 05:40:21] -rw-r--r-- 2 boinc boinc    592401 Jan 11 02:00 input.tar.gz
[2026-01-11 05:40:21] -rw------- 1 boinc boinc 220391013 Jan 11 05:38 HITS.pool.root.1
[2026-01-11 05:40:21] -rw------- 1 boinc boinc   2232320 Jan 11 05:40 result.tar.gz
05:40:22 (3569213): run_atlas exited; CPU time 51142.792508
05:40:22 (3569213): called boinc_finish(0)

</stderr_txt>
]]>

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